View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15676_high_5 (Length: 349)
Name: NF15676_high_5
Description: NF15676
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15676_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 312; Significance: 1e-176; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 312; E-Value: 1e-176
Query Start/End: Original strand, 1 - 320
Target Start/End: Complemental strand, 5942001 - 5941682
Alignment:
| Q |
1 |
agtttcaaataaagtggtgtacattaaagctaatgttagttttaatatgtacaaaactacaagaaatgtaacctatcaatgttggtccactattattgta |
100 |
Q |
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| T |
5942001 |
agtttcaaataaagtggtgtacattaaagctaatgttggttttaatatgtacaaaactacaagaaatgtaacctatcaatgttggtccactattattgta |
5941902 |
T |
|
| Q |
101 |
tggtcaatttaatattttggagacagtgttataaacaatttttattgatgttataatgtattgtaccggacgaattatcttttcctttgtatattagggt |
200 |
Q |
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| T |
5941901 |
tggtcaatttaatattttggagacagtgttataaacaatttttattgatgttataatgtattgtaccggacgaattatcttttcctttgtatattagggt |
5941802 |
T |
|
| Q |
201 |
aacataaataagaagttgttgtaatgagttaattttctcttatttctgttctcaattttctcttatttaatcctcacctgccttaatcattcaaattatt |
300 |
Q |
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|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
5941801 |
aacataaataaggagttgttgtaatgagttaattttctcttatttctgttctcaattttctcttatttaatcctcacctgccttaatcattcaaattatt |
5941702 |
T |
|
| Q |
301 |
ttattaatcaatgttatggt |
320 |
Q |
| |
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|||||||||||||||||||| |
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| T |
5941701 |
ttattaatcaatgttatggt |
5941682 |
T |
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