View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15678_high_7 (Length: 281)
Name: NF15678_high_7
Description: NF15678
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15678_high_7 |
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Alignment Details
Target: chr5 (Bit Score: 176; Significance: 7e-95; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 176; E-Value: 7e-95
Query Start/End: Original strand, 36 - 235
Target Start/End: Complemental strand, 33645519 - 33645321
Alignment:
| Q |
36 |
gagaactcaaagtacaaataaactacaacaatactcatcgcatcggattaacaatagctcttggagccactattgtagtcaatacatggagccatgtatt |
135 |
Q |
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| T |
33645519 |
gagaactcaaagtacaaataa-ctacaacaatactcatcgcatcggattaacaatagctcttggagccactattgtagtcaatacatggagccatatatt |
33645421 |
T |
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| Q |
136 |
acacttaatcaacgaacttgtgttttgatcacaacatagacatacaacgtttaaaaatgttatttttcattacctaataacaaaacaaccttttttattc |
235 |
Q |
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| T |
33645420 |
acagttaatcaacgaacttgtgttttgatcacaacatagacatacaacgtttaaaaaagttatttttcattacctaataacaaaacaacattttttattc |
33645321 |
T |
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