View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15678_low_13 (Length: 234)
Name: NF15678_low_13
Description: NF15678
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15678_low_13 |
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Alignment Details
Target: chr8 (Bit Score: 208; Significance: 1e-114; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 8 - 219
Target Start/End: Original strand, 4672558 - 4672769
Alignment:
| Q |
8 |
aggagcagagatatagtataaacaaatacaaaaaaccaaacttacaaacgaattctccaatgcaaatgatcaactcccctattaacctcagacaatctca |
107 |
Q |
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| T |
4672558 |
aggagaagagatatagtataaacaaatacaaaaaaccaaacttacaaacgaattctccaatgcaaatgatcaactcccctattaacctcagacaatctca |
4672657 |
T |
|
| Q |
108 |
aaggacgcaactcgccactcttctcgggaagccaagaccccaacccatcttccaaaactgaaaacccactaaccttttcactacttttcacttcatgaaa |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4672658 |
aaggacgcaactcgccactcttctcgggaagccaagaccccaacccatcttccaaaactgaaaacccactaaccttttcactacttttcacttcatgaaa |
4672757 |
T |
|
| Q |
208 |
ctctttcatagt |
219 |
Q |
| |
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|||||||||||| |
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| T |
4672758 |
ctctttcatagt |
4672769 |
T |
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