View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
Legend |
| Query |
| Query hiting target |
| Query hiting target's complemental strand |
| Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF1567_high_2 (Length: 253)
Name: NF1567_high_2
Description: NF1567
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
[»] NF1567_high_2 |
| |
|
[»] scaffold0119 (2 HSPs) |
| | |
|
[»] scaffold0110 (1 HSPs) |
| | |
|
Alignment Details
Target: chr3 (Bit Score: 217; Significance: 1e-119; HSPs: 33)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 1 - 225
Target Start/End: Original strand, 23310388 - 23310612
Alignment:
Q |
1 |
tccttgatccataaatgttatgtttaaaatgattggttttgtcatctaaaaatgtctaacagcgcatcttcttatccgtttgtcttctattcatatgttg |
100 |
Q |
|
|
|||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
23310388 |
tccttgatccgtaaatgttatatttaaaatgattggttttgtcatctaaaaatgtctaacagcgcatcttcttatccgtttgtcttctattcatatgttg |
23310487 |
T |
|
Q |
101 |
ctaatccttgatatatggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatgatttaggttg |
200 |
Q |
|
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
T |
23310488 |
ctaatccttgatatatggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatgatttaggttg |
23310587 |
T |
|
Q |
201 |
attattaataattgatatggtagac |
225 |
Q |
|
|
||||||||||||||||||||||||| |
|
|
T |
23310588 |
attattaataattgatatggtagac |
23310612 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 115 - 219
Target Start/End: Original strand, 32982270 - 32982374
Alignment:
Q |
115 |
atggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatgatttaggttgattattaataattg |
214 |
Q |
|
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| |
|
|
T |
32982270 |
atggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatcaatcaatgatttaagttgattattaataattg |
32982369 |
T |
|
Q |
215 |
atatg |
219 |
Q |
|
|
||||| |
|
|
T |
32982370 |
atatg |
32982374 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 117 - 176
Target Start/End: Original strand, 37065971 - 37066030
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattct |
176 |
Q |
|
|
||||||||||||||||||||||||||| || |||||||||||||||| ||| |||||||| |
|
|
T |
37065971 |
ggatattttgactccaagagtaagtctctaaacttactccaaatctttgcccttaattct |
37066030 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 43493684 - 43493619
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
||||||||||||||||||||||||| || |||||||||||||||| || |||||||||||||| |
|
|
T |
43493684 |
ggatattttgactccaagagtaagtgtaatatcttactccaaatcttgacctttaattctaatatt |
43493619 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 162
Target Start/End: Original strand, 52362644 - 52362689
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatct |
162 |
Q |
|
|
||||||||||||||||||||||||| ||||||| |||||||||||| |
|
|
T |
52362644 |
ggatattttgactccaagagtaagtttatagacctactccaaatct |
52362689 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 54694934 - 54695007
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatg |
190 |
Q |
|
|
||||||||||||||||||||||| || | ||| ||||||||||||||| || || || ||||||||||| |||| |
|
|
T |
54694934 |
ggatattttgactccaagagtaactcaaaagagttactccaaatcttgacccttcatcctaatattaattaatg |
54695007 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 118 - 162
Target Start/End: Complemental strand, 16674345 - 16674301
Alignment:
Q |
118 |
gatattttgactccaagagtaagtctatagacttactccaaatct |
162 |
Q |
|
|
||||||||||||| |||||||||| |||||||||||||||||||| |
|
|
T |
16674345 |
gatattttgactcaaagagtaagtttatagacttactccaaatct |
16674301 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 116 - 225
Target Start/End: Original strand, 51924364 - 51924474
Alignment:
Q |
116 |
tggatattttgactccaagagtaagtctata--gacttactccaaatcttggccattaattctaatattaatcaatgatttaggttgattattaataatt |
213 |
Q |
|
|
||||||||||||||||| ||||||||||||| |||||||| ||||| ||| || || ||| |||||| || ||| ||||| ||||||| |||||||| |
|
|
T |
51924364 |
tggatattttgactcca-gagtaagtctatatagacttacttcaaattttgacctttgattgtaatatcaactaatattttagattgattaataataatt |
51924462 |
T |
|
Q |
214 |
gatatggtagac |
225 |
Q |
|
|
|||||| ||||| |
|
|
T |
51924463 |
gatatgatagac |
51924474 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 193
Target Start/End: Complemental strand, 23516999 - 23516932
Alignment:
Q |
126 |
gactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatgatt |
193 |
Q |
|
|
|||||||||||||| | || ||| ||||||||||||||| ||||||||| |||| ||||| ||||||| |
|
|
T |
23516999 |
gactccaagagtaaatgtaaagagttactccaaatcttgaccattaattgtaatcttaattaatgatt |
23516932 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #10
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 179
Target Start/End: Complemental strand, 14404727 - 14404665
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaat |
179 |
Q |
|
|
||||||||||||| ||||||||||| || ||||||||||||||||| || ||||||||||| |
|
|
T |
14404727 |
ggatattttgacttcaagagtaagtgtaataacttactccaaatcttgacctttaattctaat |
14404665 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 17343808 - 17343742
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatta |
183 |
Q |
|
|
||||||||||||||||||||||||| || |||||||||||||||| || |||||| |||||||| |
|
|
T |
17343808 |
ggatattttgactccaagagtaagtgtaatatcttactccaaatcttgacctttaattttaatatta |
17343742 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 33639698 - 33639652
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatctt |
163 |
Q |
|
|
|||||| ||||||||||||||||||||| |||||||||||| ||||| |
|
|
T |
33639698 |
ggatatattgactccaagagtaagtctaaagacttactccagatctt |
33639652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 118 - 164
Target Start/End: Complemental strand, 37066653 - 37066607
Alignment:
Q |
118 |
gatattttgactccaagagtaagtctatagacttactccaaatcttg |
164 |
Q |
|
|
|||||||||||| ||||||||||||| || ||||||||||||||||| |
|
|
T |
37066653 |
gatattttgacttcaagagtaagtctctaaacttactccaaatcttg |
37066607 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 43492199 - 43492264
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
||||||||||||||||||||||||| || ||||||| |||||||| || |||||||||||||| |
|
|
T |
43492199 |
ggatattttgactccaagagtaagtgtaatatcttactctaaatcttgacctttaattctaatatt |
43492264 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 118 - 163
Target Start/End: Original strand, 52341341 - 52341386
Alignment:
Q |
118 |
gatattttgactccaagagtaagtctatagacttactccaaatctt |
163 |
Q |
|
|
||||| ||||||||||||||||||||||| | |||||||||||||| |
|
|
T |
52341341 |
gatatattgactccaagagtaagtctatacaattactccaaatctt |
52341386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 54515717 - 54515652
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
||||||||||||||||||||||||| || ||||||||||||||| || |||||||||||||| |
|
|
T |
54515717 |
ggatattttgactccaagagtaagtgtaatatcttactccaaatcttaacctttaattctaatatt |
54515652 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 179
Target Start/End: Complemental strand, 15274090 - 15274035
Alignment:
Q |
124 |
ttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaat |
179 |
Q |
|
|
||||||||||||||||||||| | |||||||||||||| || ||||| ||| |||| |
|
|
T |
15274090 |
ttgactccaagagtaagtctaaacacttactccaaatcatgaccattcattttaat |
15274035 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 179
Target Start/End: Original strand, 40872934 - 40872989
Alignment:
Q |
124 |
ttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaat |
179 |
Q |
|
|
||||||||||||||||||||| | |||||||||||||| || ||||| ||| |||| |
|
|
T |
40872934 |
ttgactccaagagtaagtctaaacacttactccaaatcatgaccattcattttaat |
40872989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 179
Target Start/End: Complemental strand, 40877310 - 40877255
Alignment:
Q |
124 |
ttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaat |
179 |
Q |
|
|
||||||||||||||||||||| | |||||||||||||| || ||||| ||| |||| |
|
|
T |
40877310 |
ttgactccaagagtaagtctaaacacttactccaaatcatgaccattcattttaat |
40877255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 179
Target Start/End: Original strand, 44265930 - 44265992
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaat |
179 |
Q |
|
|
||||||||||||||||||||||||| || |||||||| |||||||| | ||||||||||| |
|
|
T |
44265930 |
ggatattttgactccaagagtaagtgtaataacttactctaaatcttgacatttaattctaat |
44265992 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 17339830 - 17339895
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
||||||||||||||||||||||||| || ||||| |||||||||| || |||||| ||||||| |
|
|
T |
17339830 |
ggatattttgactccaagagtaagtgtaatatcttacaccaaatcttgacctttaattttaatatt |
17339895 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 174
Target Start/End: Complemental strand, 19192361 - 19192304
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaatt |
174 |
Q |
|
|
||||||||||||||||||||||||| || |||||||||||||||| || |||||| |
|
|
T |
19192361 |
ggatattttgactccaagagtaagtgtaatatcttactccaaatcttgacctttaatt |
19192304 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 162
Target Start/End: Original strand, 48207603 - 48207648
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatct |
162 |
Q |
|
|
|||||| |||||||||||| |||||||| ||||||| ||||||||| |
|
|
T |
48207603 |
ggatatattgactccaagaataagtctaaagacttattccaaatct |
48207648 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 174
Target Start/End: Complemental strand, 5742476 - 5742421
Alignment:
Q |
119 |
atattttgactccaagagtaagt-ctatagacttactccaaatcttggccattaatt |
174 |
Q |
|
|
||||||||||||||||||||||| | ||| ||||||||||||||||| || |||||| |
|
|
T |
5742476 |
atattttgactccaagagtaagtgcaata-acttactccaaatcttgacctttaatt |
5742421 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 174
Target Start/End: Complemental strand, 5779435 - 5779380
Alignment:
Q |
119 |
atattttgactccaagagtaagt-ctatagacttactccaaatcttggccattaatt |
174 |
Q |
|
|
||||||||||||||||||||||| | ||| ||||||||||||||||| || |||||| |
|
|
T |
5779435 |
atattttgactccaagagtaagtgcaata-acttactccaaatcttgacctttaatt |
5779380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 177
Target Start/End: Complemental strand, 8322323 - 8322263
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattcta |
177 |
Q |
|
|
||||||||||||||||||||||||| | |||||||| ||||||| ||| ||||||||| |
|
|
T |
8322323 |
ggatattttgactccaagagtaagtttggttacttactctaaatctttgcctttaattcta |
8322263 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 157
Target Start/End: Complemental strand, 29809320 - 29809280
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactcca |
157 |
Q |
|
|
||||||||||||||||||||||| |||| ||| |||||||| |
|
|
T |
29809320 |
ggatattttgactccaagagtaattctaaagagttactcca |
29809280 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 35835421 - 35835465
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatc |
161 |
Q |
|
|
||||||||||||||||||||||| ||| | || |||||||||||| |
|
|
T |
35835421 |
ggatattttgactccaagagtaactcttttgagttactccaaatc |
35835465 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 35892138 - 35892182
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatc |
161 |
Q |
|
|
||||||||||||||||||||||| ||| | || |||||||||||| |
|
|
T |
35892138 |
ggatattttgactccaagagtaactcttttgagttactccaaatc |
35892182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 157
Target Start/End: Complemental strand, 46914955 - 46914915
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactcca |
157 |
Q |
|
|
||||||||||||||||||||||| |||| ||| |||||||| |
|
|
T |
46914955 |
ggatattttgactccaagagtaactctaaagagttactcca |
46914915 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 47607197 - 47607241
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatc |
161 |
Q |
|
|
|||||| ||||||| ||||||||||| ||||| |||||||||||| |
|
|
T |
47607197 |
ggatatattgactcgaagagtaagtcaatagagttactccaaatc |
47607241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 163
Target Start/End: Complemental strand, 48208416 - 48208368
Alignment:
Q |
115 |
atggatattttgactccaagagtaagtctatagacttactccaaatctt |
163 |
Q |
|
|
|||||||| |||||||||||||||| || | ||| |||||||||||||| |
|
|
T |
48208416 |
atggatatattgactccaagagtaactcaaaagaattactccaaatctt |
48208368 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 115 - 163
Target Start/End: Original strand, 48452917 - 48452965
Alignment:
Q |
115 |
atggatattttgactccaagagtaagtctatagacttactccaaatctt |
163 |
Q |
|
|
|||||||| ||||||| ||||||||||||| ||| |||||| ||||||| |
|
|
T |
48452917 |
atggatatattgactctaagagtaagtctaaagagttactcaaaatctt |
48452965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 85; Significance: 1e-40; HSPs: 22)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 117 - 225
Target Start/End: Complemental strand, 34239628 - 34239520
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatgatttaggttgattattaataattgat |
216 |
Q |
|
|
|||||||||||||||||||||||||||||||| |||||||||||||| | |||||||||||||| |||||||| ||||||||||||||||||||||||| |
|
|
T |
34239628 |
ggatattttgactccaagagtaagtctatagatttactccaaatcttcgtcattaattctaatagcaatcaatggtttaggttgattattaataattgat |
34239529 |
T |
|
Q |
217 |
atggtagac |
225 |
Q |
|
|
||||||||| |
|
|
T |
34239528 |
atggtagac |
34239520 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 162 - 225
Target Start/End: Original strand, 41527071 - 41527134
Alignment:
Q |
162 |
ttggccattaattctaatattaatcaatgatttaggttgattattaataattgatatggtagac |
225 |
Q |
|
|
|||| |||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |
|
|
T |
41527071 |
ttggtcatttattctaatattaatcaatggtttaggttgattattaataattgatatggtagac |
41527134 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 124 - 185
Target Start/End: Complemental strand, 529653 - 529592
Alignment:
Q |
124 |
ttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaat |
185 |
Q |
|
|
|||||||||||||||||| || |||||||||||||||||| |||||||||| |||||||||| |
|
|
T |
529653 |
ttgactccaagagtaagtataaagacttactccaaatcttagccattaattttaatattaat |
529592 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 118 - 175
Target Start/End: Original strand, 34238822 - 34238879
Alignment:
Q |
118 |
gatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattc |
175 |
Q |
|
|
|||||||||||||||| ||||||||||||||||||||||||||||| ||| ||||||| |
|
|
T |
34238822 |
gatattttgactccaaaagtaagtctatagacttactccaaatcttagcctttaattc |
34238879 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 126 - 183
Target Start/End: Original strand, 528924 - 528981
Alignment:
Q |
126 |
gactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatta |
183 |
Q |
|
|
|||||||||||||||| || ||||||||||||||||||| ||||||||| |||||||| |
|
|
T |
528924 |
gactccaagagtaagtataaagacttactccaaatcttgaccattaattttaatatta |
528981 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 13545414 - 13545369
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatct |
162 |
Q |
|
|
||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
T |
13545414 |
ggatattttgactccaagagtaagtttatagacttactccaaatct |
13545369 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 162
Target Start/End: Original strand, 41320013 - 41320058
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatct |
162 |
Q |
|
|
||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
T |
41320013 |
ggatattttgactccaagagtaagtttatagacttactccaaatct |
41320058 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 2283941 - 2284006
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
||||||||||||||||||||||||| || |||||||||||||||| || |||||||||||||| |
|
|
T |
2283941 |
ggatattttgactccaagagtaagtgtaatatcttactccaaatcttgacctttaattctaatatt |
2284006 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 2285107 - 2285042
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
||||||||||||||||||||||||| || |||||||||||||||| || |||||||||||||| |
|
|
T |
2285107 |
ggatattttgactccaagagtaagtgtaatatcttactccaaatcttgacctttaattctaatatt |
2285042 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 118 - 162
Target Start/End: Complemental strand, 41320826 - 41320782
Alignment:
Q |
118 |
gatattttgactccaagagtaagtctatagacttactccaaatct |
162 |
Q |
|
|
|||||||||||||||| ||||||| |||||||||||||||||||| |
|
|
T |
41320826 |
gatattttgactccaatagtaagtttatagacttactccaaatct |
41320782 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 182
Target Start/End: Complemental strand, 36912766 - 36912703
Alignment:
Q |
119 |
atattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
||||||||||||||||||||||| || |||||||||||||||| || |||||||||||||| |
|
|
T |
36912766 |
atattttgactccaagagtaagtgtaatatcttactccaaatcttgacctttaattctaatatt |
36912703 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 162
Target Start/End: Original strand, 13544602 - 13544647
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatct |
162 |
Q |
|
|
||||||||||||| ||||||||||| |||||||||| ||||||||| |
|
|
T |
13544602 |
ggatattttgacttcaagagtaagtttatagacttattccaaatct |
13544647 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 29156156 - 29156229
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatg |
190 |
Q |
|
|
||||||||||||||||||||||| || | ||| |||||||||||| || || || || ||||||||||| |||| |
|
|
T |
29156156 |
ggatattttgactccaagagtaactcaaaagagttactccaaatcctgacccttcatcctaatattaattaatg |
29156229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 181
Target Start/End: Complemental strand, 6583270 - 6583206
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatat |
181 |
Q |
|
|
||||||||||||||||||||||||| || ||||||| |||||||| || ||||||||||||| |
|
|
T |
6583270 |
ggatattttgactccaagagtaagtataatatcttactcaaaatcttgacctttaattctaatat |
6583206 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 182
Target Start/End: Original strand, 9259981 - 9260045
Alignment:
Q |
118 |
gatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
||||||| |||||||||||||||| || |||||||||||||||| || |||||||||||||| |
|
|
T |
9259981 |
gatatttggactccaagagtaagtgtaatatcttactccaaatcttgacctttaattctaatatt |
9260045 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 8194313 - 8194270
Alignment:
Q |
124 |
ttgactccaagagtaagtctatagacttactccaaatcttggcc |
167 |
Q |
|
|
||||||||||||||||||||| ||| |||||||||||| ||||| |
|
|
T |
8194313 |
ttgactccaagagtaagtctaaagagttactccaaatcatggcc |
8194270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 157
Target Start/End: Original strand, 24121398 - 24121440
Alignment:
Q |
115 |
atggatattttgactccaagagtaagtctatagacttactcca |
157 |
Q |
|
|
||||||||||||||||||||||||| |||| ||| |||||||| |
|
|
T |
24121398 |
atggatattttgactccaagagtaactctaaagagttactcca |
24121440 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 115 - 161
Target Start/End: Complemental strand, 32362045 - 32361999
Alignment:
Q |
115 |
atggatattttgactccaagagtaagtctatagacttactccaaatc |
161 |
Q |
|
|
|||||||| | |||||||||||||||||||||||||| |||||||| |
|
|
T |
32362045 |
atggatatatcgactccaagagtaagtctatagactttttccaaatc |
32361999 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 174
Target Start/End: Complemental strand, 23288962 - 23288905
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaatt |
174 |
Q |
|
|
|||||||||||||| |||||||||| || ||||||||||||||||| || |||||| |
|
|
T |
23288962 |
ggatattttgactctaagagtaagtgtaataacttactccaaatcttgacctttaatt |
23288905 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 32705737 - 32705672
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
||||||||||||||||||||||| | || |||||||||||| ||| || |||||||||||||| |
|
|
T |
32705737 |
ggatattttgactccaagagtaaatgtaatatcttactccaaattttgacctttaattctaatatt |
32705672 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 36911592 - 36911657
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
||||||||||||||||||||||||| || |||| || |||||||| || |||||||||||||| |
|
|
T |
36911592 |
ggatattttgactccaagagtaagtgtaatatcttattctaaatcttgacctttaattctaatatt |
36911657 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 41527803 - 41527758
Alignment:
Q |
118 |
gatattttgactccaagagtaagtctatagacttactccaaatctt |
163 |
Q |
|
|
|||||||| |||| |||||||| |||||| |||||||||||||||| |
|
|
T |
41527803 |
gatattttaactctaagagtaaatctatatacttactccaaatctt |
41527758 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 66; Significance: 3e-29; HSPs: 26)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 144 - 225
Target Start/End: Original strand, 8469267 - 8469348
Alignment:
Q |
144 |
atagacttactccaaatcttggccattaattctaatattaatcaatgatttaggttgattattaataattgatatggtagac |
225 |
Q |
|
|
|||||||| ||||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||||||||||||||| |
|
|
T |
8469267 |
atagacttgctccaaatcttggccattaattctaatatcaatcaatggtttaagttgattattaataattgatatggtagac |
8469348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 175
Target Start/End: Complemental strand, 8469857 - 8469799
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattc |
175 |
Q |
|
|
||||||||||||||||||||||| | ||||||||||||| ||||||| ||| ||||||| |
|
|
T |
8469857 |
ggatattttgactccaagagtaaatttatagacttactctaaatcttagcctttaattc |
8469799 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 225
Target Start/End: Complemental strand, 7209722 - 7209611
Alignment:
Q |
117 |
ggatattttgactccaaga---gtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatgatttaggttgattattaataatt |
213 |
Q |
|
|
||||||||||||||||||| |||||||||| |||||||||||||||| |||| |||||||| ||| |||| ||||| |||||| |||||||| |
|
|
T |
7209722 |
ggatattttgactccaagaagagtaagtctattaacttactccaaatcttaatatttaactctaatatcaattaatggtttagattgattcataataatt |
7209623 |
T |
|
Q |
214 |
gatatggtagac |
225 |
Q |
|
|
|||||| ||||| |
|
|
T |
7209622 |
gatatgatagac |
7209611 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 124 - 185
Target Start/End: Original strand, 8609212 - 8609273
Alignment:
Q |
124 |
ttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaat |
185 |
Q |
|
|
|||||||||||||||||| || | | |||||||||||||| |||||||||| |||||||||| |
|
|
T |
8609212 |
ttgactccaagagtaagtataaatagttactccaaatcttagccattaattttaatattaat |
8609273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 25838446 - 25838511
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
||||||||||||||||||||||||| || |||||||||||||||| || |||||||||||||| |
|
|
T |
25838446 |
ggatattttgactccaagagtaagtgtaatatcttactccaaatcttgacctttaattctaatatt |
25838511 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 217
Target Start/End: Original strand, 7209064 - 7209162
Alignment:
Q |
118 |
gatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatgatttaggttgattattaataattgata |
217 |
Q |
|
|
|||||||||||||||||||||||| | | |||||||||||||||| ||| ||||||||| |||| |||| ||||| ||||||| |||||| ||||| |
|
|
T |
7209064 |
gatattttgactccaagagtaagt-tgtctacttactccaaatcttagcctttaattctataattagctaatggtttagattgattaataataagtgata |
7209162 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 124 - 163
Target Start/End: Original strand, 19186445 - 19186484
Alignment:
Q |
124 |
ttgactccaagagtaagtctatagacttactccaaatctt |
163 |
Q |
|
|
||||||||||||||||||||| |||||||||||||||||| |
|
|
T |
19186445 |
ttgactccaagagtaagtctaaagacttactccaaatctt |
19186484 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 164
Target Start/End: Complemental strand, 41609061 - 41609014
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttg |
164 |
Q |
|
|
||||||||||||| ||||||||||||| || ||||||||||||||||| |
|
|
T |
41609061 |
ggatattttgacttcaagagtaagtctctaaacttactccaaatcttg |
41609014 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 185
Target Start/End: Complemental strand, 8609999 - 8609938
Alignment:
Q |
124 |
ttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaat |
185 |
Q |
|
|
||||||| ||||||||| || ||| ||||||||||||||| ||||||||| |||||||||| |
|
|
T |
8609999 |
ttgactcaaagagtaagcataaagagttactccaaatcttgaccattaattttaatattaat |
8609938 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 19080985 - 19080920
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
||||||||||||| ||||||||||| || |||||||||||||||| || |||||||||||||| |
|
|
T |
19080985 |
ggatattttgacttcaagagtaagtgtaatatcttactccaaatcttgacctttaattctaatatt |
19080920 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 190
Target Start/End: Complemental strand, 27100427 - 27100354
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatg |
190 |
Q |
|
|
||||||||||||||||||||||| |||| | | |||||||| ||||| |||||| ||| |||||| ||| |||| |
|
|
T |
27100427 |
ggatattttgactccaagagtaactctaaaaagttactccacatcttagccattgattttaatatgaattaatg |
27100354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 117 - 161
Target Start/End: Complemental strand, 22778179 - 22778135
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatc |
161 |
Q |
|
|
|||||| |||||| |||||||||||| |||||||||||||||||| |
|
|
T |
22778179 |
ggatatattgacttcaagagtaagtcaatagacttactccaaatc |
22778135 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 175
Target Start/End: Complemental strand, 20339843 - 20339785
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattc |
175 |
Q |
|
|
||||||||||||||||||||||||| || |||||||||||||||| || ||||||| |
|
|
T |
20339843 |
ggatattttgactccaagagtaagtgtaatatcttactccaaatcttgacctttaattc |
20339785 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 196
Target Start/End: Complemental strand, 25109970 - 25109892
Alignment:
Q |
118 |
gatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatgatttag |
196 |
Q |
|
|
|||||||||||||||||||||||| | | |||||||||||||| || || |||||| |||||| || ||||| |||| |
|
|
T |
25109970 |
gatattttgactccaagagtaagtgtgttaacttactccaaatcatgacctttaatttcaatattgattaatgacttag |
25109892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 196
Target Start/End: Complemental strand, 25169062 - 25168984
Alignment:
Q |
118 |
gatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatgatttag |
196 |
Q |
|
|
|||||||||||||||||||||||| | | |||||||||||||| || || |||||| |||||| || ||||| |||| |
|
|
T |
25169062 |
gatattttgactccaagagtaagtgtgttaacttactccaaatcatgacctttaatttcaatattgattaatgacttag |
25168984 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 183
Target Start/End: Complemental strand, 25839708 - 25839642
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatta |
183 |
Q |
|
|
|||||||||||||| |||||||||| || ||||||| |||||||| || ||||||||||||||| |
|
|
T |
25839708 |
ggatattttgactcaaagagtaagtgtaatatcttactctaaatcttgacctttaattctaatatta |
25839642 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 190
Target Start/End: Complemental strand, 42948215 - 42948149
Alignment:
Q |
124 |
ttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatg |
190 |
Q |
|
|
||||||||||||||||||||| ||| ||||||| |||| || || |||||| ||||| || |||||| |
|
|
T |
42948215 |
ttgactccaagagtaagtctaaagagttactcccaatcatgacctttaattttaataatagtcaatg |
42948149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 118 - 163
Target Start/End: Complemental strand, 2297233 - 2297188
Alignment:
Q |
118 |
gatattttgactccaagagtaagtctatagacttactccaaatctt |
163 |
Q |
|
|
||||| |||| |||||||||||| ||||| |||||||||||||||| |
|
|
T |
2297233 |
gatatattgaatccaagagtaagactatatacttactccaaatctt |
2297188 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 19080181 - 19080246
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
||||||||||||||||||||||||| || ||||||| |||||||| || ||||||| |||||| |
|
|
T |
19080181 |
ggatattttgactccaagagtaagtgtaatatcttactctaaatcttgacctttaattccaatatt |
19080246 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 162
Target Start/End: Original strand, 41516464 - 41516509
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatct |
162 |
Q |
|
|
|||||||||||||| ||||||| | |||||||||||||||||||| |
|
|
T |
41516464 |
ggatattttgactctaagagtatatttatagacttactccaaatct |
41516509 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 157
Target Start/End: Original strand, 10555383 - 10555423
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactcca |
157 |
Q |
|
|
|||||| ||||||||||||||||||||| ||| |||||||| |
|
|
T |
10555383 |
ggatatattgactccaagagtaagtctaaagagttactcca |
10555423 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 157
Target Start/End: Original strand, 23237045 - 23237085
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactcca |
157 |
Q |
|
|
|||||| ||||||||||||||||||||| ||| |||||||| |
|
|
T |
23237045 |
ggatatattgactccaagagtaagtctaaagagttactcca |
23237085 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 157
Target Start/End: Complemental strand, 23244403 - 23244363
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactcca |
157 |
Q |
|
|
|||||| ||||||||||||||||||||| ||| |||||||| |
|
|
T |
23244403 |
ggatatattgactccaagagtaagtctaaagagttactcca |
23244363 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 157
Target Start/End: Original strand, 27099544 - 27099584
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactcca |
157 |
Q |
|
|
||||||||||||||||||||||| |||| ||| |||||||| |
|
|
T |
27099544 |
ggatattttgactccaagagtaactctaaagagttactcca |
27099584 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 157
Target Start/End: Original strand, 33766489 - 33766529
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactcca |
157 |
Q |
|
|
|||||| ||||||||||||||||||||| ||| |||||||| |
|
|
T |
33766489 |
ggatatattgactccaagagtaagtctaaagagttactcca |
33766529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 157
Target Start/End: Original strand, 42994481 - 42994521
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactcca |
157 |
Q |
|
|
|||||| ||||||||||||||||||||| ||| |||||||| |
|
|
T |
42994481 |
ggatatattgactccaagagtaagtctaaagagttactcca |
42994521 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 64; Significance: 4e-28; HSPs: 34)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 117 - 216
Target Start/End: Complemental strand, 39773454 - 39773355
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatgatttaggttgattattaataattgat |
216 |
Q |
|
|
||||||||||||||||||||||||||||| ||||||||||||||||| || |||| |||||||||||| |||||||||| |||||| ||||||||||| |
|
|
T |
39773454 |
ggatattttgactccaagagtaagtctattaacttactccaaatcttgacctttaactctaatattaattaatgatttagattgattcataataattgat |
39773355 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 117 - 219
Target Start/End: Original strand, 51308625 - 51308727
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatgatttaggttgattattaataattgat |
216 |
Q |
|
|
||||||||||||| |||||||||||| || |||||||| |||||||| | |||| |||||||| ||| |||| ||||| |||||| ||||||||||| |
|
|
T |
51308625 |
ggatattttgacttcaagagtaagtccattaacttactctaaatcttgacttttaactctaatatcaattaatggtttagattgattcataataattgat |
51308724 |
T |
|
Q |
217 |
atg |
219 |
Q |
|
|
||| |
|
|
T |
51308725 |
atg |
51308727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 164
Target Start/End: Complemental strand, 4968976 - 4968931
Alignment:
Q |
119 |
atattttgactccaagagtaagtctatagacttactccaaatcttg |
164 |
Q |
|
|
|||||||||||||||||||||||||||| ||||||||||||||||| |
|
|
T |
4968976 |
atattttgactccaagagtaagtctataaacttactccaaatcttg |
4968931 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #4
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 17238523 - 17238478
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatct |
162 |
Q |
|
|
||||||||||||||||||||||||| |||||||||||||||||||| |
|
|
T |
17238523 |
ggatattttgactccaagagtaagtttatagacttactccaaatct |
17238478 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 217
Target Start/End: Original strand, 39772824 - 39772922
Alignment:
Q |
119 |
atattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatgatttaggttgattattaataattgata |
217 |
Q |
|
|
||||||||||||||||||||||| | | ||||||||||||||| ||| ||||||||| |||| |||||||||| ||||||| |||||| ||||| |
|
|
T |
39772824 |
atattttgactccaagagtaagtttgtctccttactccaaatcttagcctttaattctataattagctaatgatttagattgattaataataagtgata |
39772922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 162
Target Start/End: Original strand, 6631320 - 6631365
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatct |
162 |
Q |
|
|
|||||||||||||||||| |||||| |||||||||||||||||||| |
|
|
T |
6631320 |
ggatattttgactccaagggtaagtttatagacttactccaaatct |
6631365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 6632132 - 6632087
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatct |
162 |
Q |
|
|
|||||||| |||||||||||||||| |||||||||||||||||||| |
|
|
T |
6632132 |
ggatatttagactccaagagtaagtttatagacttactccaaatct |
6632087 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 214
Target Start/End: Complemental strand, 18122408 - 18122311
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatgatttaggttgattattaataattg |
214 |
Q |
|
|
||||||||||||||||| ||||||| | | |||||||| ||||||||| ||||||||||||| ||| |||| || || ||||||| ||||||||| |
|
|
T |
18122408 |
ggatattttgactccaatagtaagtttgttatgttactccacatcttggcctttaattctaatatcaattaatggttaagattgattaataataattg |
18122311 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 162
Target Start/End: Original strand, 19990280 - 19990325
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatct |
162 |
Q |
|
|
|||||| ||||||||||||||||||||| ||||||||||||||||| |
|
|
T |
19990280 |
ggatatattgactccaagagtaagtctaaagacttactccaaatct |
19990325 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 28313844 - 28313917
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatg |
190 |
Q |
|
|
||||||||||||||||||||||| || | ||| ||||||||||||||| || || || ||||||||||| |||| |
|
|
T |
28313844 |
ggatattttgactccaagagtaactcaaaagagttactccaaatcttgacccttcatcctaatattaattaatg |
28313917 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 42023210 - 42023275
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
||||||||||||||||||||||||| || ||||||||||||||||| || |||||| ||||||| |
|
|
T |
42023210 |
ggatattttgactccaagagtaagtgtaataacttactccaaatcttgacctttaattgtaatatt |
42023275 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 118 - 182
Target Start/End: Original strand, 35574877 - 35574941
Alignment:
Q |
118 |
gatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
|||||||||||||||||||||||| || |||||||||||||||| || |||||||||||||| |
|
|
T |
35574877 |
gatattttgactccaagagtaagtgtaatatcttactccaaatcttgacctttaattctaatatt |
35574941 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 160
Target Start/End: Original strand, 17237709 - 17237752
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaat |
160 |
Q |
|
|
||||||||||||| ||||||||||| |||||||||||||||||| |
|
|
T |
17237709 |
ggatattttgactgcaagagtaagtttatagacttactccaaat |
17237752 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 8850458 - 8850523
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
||||||||||||||||||||||||| || ||||||| |||||||| || |||||||||||||| |
|
|
T |
8850458 |
ggatattttgactccaagagtaagtgtaatatcttactctaaatcttgacctttaattctaatatt |
8850523 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 10846792 - 10846727
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
||||||||||||||||||||||||| || |||||| ||||||||| || |||||||||||||| |
|
|
T |
10846792 |
ggatattttgactccaagagtaagtgtaatatcttacttcaaatcttgacctttaattctaatatt |
10846727 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 22373276 - 22373341
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
|||||||||||||| |||||||||| || |||||||||||||||| || |||||||||||||| |
|
|
T |
22373276 |
ggatattttgactcaaagagtaagtgtaatatcttactccaaatcttgacctttaattctaatatt |
22373341 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 35576045 - 35575980
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
||||||||||||||||||||||||| || |||||||||||||||| | |||||||||||||| |
|
|
T |
35576045 |
ggatattttgactccaagagtaagtgtaatatcttactccaaatcttgatctttaattctaatatt |
35575980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 212
Target Start/End: Original strand, 39870918 - 39871011
Alignment:
Q |
119 |
atattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatgatttaggttgattattaataat |
212 |
Q |
|
|
||||||||||||||| ||||||| | | |||||||| ||||||||| ||||||||||||| ||| |||| || || ||||||| ||||||| |
|
|
T |
39870918 |
atattttgactccaatagtaagtttgttatgttactccacatcttggcctttaattctaatatcaattaatggttaagattgattaataataat |
39871011 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 47966999 - 47967071
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatg |
190 |
Q |
|
|
|||||| |||||||||||||||||| | || | |||||||||||||| ||| |||||| |||||||||||||| |
|
|
T |
47966999 |
ggatatattgactccaagagtaagtgtttaaagttactccaaatcttagcc-ttaatttcaatattaatcaatg |
47967071 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 182
Target Start/End: Complemental strand, 8851760 - 8851696
Alignment:
Q |
118 |
gatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
|||||||||||||||||||||||| || |||||| ||||||||| || |||||||||||||| |
|
|
T |
8851760 |
gatattttgactccaagagtaagtataatatcttacttcaaatcttgacctttaattctaatatt |
8851696 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 162
Target Start/End: Complemental strand, 16073366 - 16073322
Alignment:
Q |
118 |
gatattttgactccaagagtaagtctatagacttactccaaatct |
162 |
Q |
|
|
||||| ||||||||||||||||||||| ||||||| ||||||||| |
|
|
T |
16073366 |
gatatattgactccaagagtaagtctaaagacttattccaaatct |
16073322 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 174
Target Start/End: Complemental strand, 19173284 - 19173228
Alignment:
Q |
118 |
gatattttgactccaagagtaagtctatagacttactccaaatcttggccattaatt |
174 |
Q |
|
|
|||||||||||||||||||||||| | | |||||||| ||||||| |||||||||| |
|
|
T |
19173284 |
gatattttgactccaagagtaagtttgtttacttactctaaatcttagccattaatt |
19173228 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 177
Target Start/End: Complemental strand, 22374907 - 22374848
Alignment:
Q |
118 |
gatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattcta |
177 |
Q |
|
|
|||||||||||||||||||||||| || |||||||||||||||| || ||||||||| |
|
|
T |
22374907 |
gatattttgactccaagagtaagtgtaatatcttactccaaatcttgacctttaattcta |
22374848 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 163
Target Start/End: Complemental strand, 16519426 - 16519380
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatctt |
163 |
Q |
|
|
||||||||||||||||||||||||| || |||||||||||||||| |
|
|
T |
16519426 |
ggatattttgactccaagagtaagtgtaataacttactccaaatctt |
16519380 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 203
Target Start/End: Original strand, 19172645 - 19172731
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatgatttaggttgatt |
203 |
Q |
|
|
||||||||||||||||||||||||| | |||||||| ||||||| || ||||||||| ||| ||| ||||| |||| |||||| |
|
|
T |
19172645 |
ggatattttgactccaagagtaagttcttttacttactctcaatcttgacctttaattctattatcaattaatgacttagattgatt |
19172731 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 161
Target Start/End: Original strand, 29254657 - 29254699
Alignment:
Q |
119 |
atattttgactccaagagtaagtctatagacttactccaaatc |
161 |
Q |
|
|
||||||| ||||||||||||||| | ||||||||||||||||| |
|
|
T |
29254657 |
atattttaactccaagagtaagtttgtagacttactccaaatc |
29254699 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 196
Target Start/End: Complemental strand, 50278071 - 50277993
Alignment:
Q |
118 |
gatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatgatttag |
196 |
Q |
|
|
|||||||||||||||||||||||| | | |||||||||||||| || || |||||| |||||| || ||||| |||| |
|
|
T |
50278071 |
gatattttgactccaagagtaagtgttttaacttactccaaatcatgacctttaatttcaatattgattaatgacttag |
50277993 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 118 - 196
Target Start/End: Complemental strand, 50289739 - 50289661
Alignment:
Q |
118 |
gatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatgatttag |
196 |
Q |
|
|
|||||||||||||||||||||||| | | |||||||||||||| || || |||||| |||||| || ||||| |||| |
|
|
T |
50289739 |
gatattttgactccaagagtaagtgttttaacttactccaaatcatgacctttaatttcaatattgattaatgacttag |
50289661 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 164
Target Start/End: Original strand, 16518492 - 16518537
Alignment:
Q |
119 |
atattttgactccaagagtaagtctatagacttactccaaatcttg |
164 |
Q |
|
|
||||||||||||||||||||||| || ||||||||||||||||| |
|
|
T |
16518492 |
atattttgactccaagagtaagtgtaataacttactccaaatcttg |
16518537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 162
Target Start/End: Complemental strand, 28314623 - 28314578
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatct |
162 |
Q |
|
|
||||||||||||||||||||||| || | ||| ||||||||||||| |
|
|
T |
28314623 |
ggatattttgactccaagagtaactcaaaagatttactccaaatct |
28314578 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 157
Target Start/End: Complemental strand, 1614962 - 1614922
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactcca |
157 |
Q |
|
|
||||||||||||||||||||||| |||| ||| |||||||| |
|
|
T |
1614962 |
ggatattttgactccaagagtaactctaaagagttactcca |
1614922 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 174
Target Start/End: Complemental strand, 5496498 - 5496442
Alignment:
Q |
118 |
gatattttgactccaagagtaagtctatagacttactccaaatcttggccattaatt |
174 |
Q |
|
|
|||||||||||||||||||||||| || |||||||||||||||| || |||||| |
|
|
T |
5496498 |
gatattttgactccaagagtaagtgtaatatcttactccaaatcttgacctttaatt |
5496442 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 10844576 - 10844632
Alignment:
Q |
118 |
gatattttgactccaagagtaagtctatagacttactccaaatcttggccattaatt |
174 |
Q |
|
|
|||||||||||||||||||||| | || ||||||||||||||||| || |||||| |
|
|
T |
10844576 |
gatattttgactccaagagtaattataataacttactccaaatcttgacctttaatt |
10844632 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 17077967 - 17078023
Alignment:
Q |
10 |
cataaatgttatgtttaaaatgattggttttgtcatctaaaaatgtctaacagcgca |
66 |
Q |
|
|
|||||||||| |||| | ||||||||||||| |||||||||| ||||||| ||||| |
|
|
T |
17077967 |
cataaatgttgtgttcatgatgattggttttgccatctaaaaaagtctaacggcgca |
17078023 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 56; Significance: 3e-23; HSPs: 15)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 118 - 225
Target Start/End: Complemental strand, 32319873 - 32319766
Alignment:
Q |
118 |
gatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatgatttaggttgattattaataattgata |
217 |
Q |
|
|
|||||||||||||||||||||||||||| ||||||||||||| ||| || |||| |||||||| ||| |||| ||||| |||||| |||||||||||| |
|
|
T |
32319873 |
gatattttgactccaagagtaagtctattaacttactccaaattttgacctttaactctaatatcaattaatggtttagattgattcataataattgata |
32319774 |
T |
|
Q |
218 |
tggtagac |
225 |
Q |
|
|
|| ||||| |
|
|
T |
32319773 |
tgatagac |
32319766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 3206472 - 3206537
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
||||||||||||||||||||||||| || |||||||||||||||| || |||||||||||||| |
|
|
T |
3206472 |
ggatattttgactccaagagtaagtgtaatatcttactccaaatcttgacctttaattctaatatt |
3206537 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 116 - 182
Target Start/End: Original strand, 18195236 - 18195302
Alignment:
Q |
116 |
tggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
|||||||||||||||||||||||||| || |||||||||||||||| || |||||| ||||||| |
|
|
T |
18195236 |
tggatattttgactccaagagtaagtgtaatatcttactccaaatcttgacctttaattataatatt |
18195302 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 124 - 161
Target Start/End: Original strand, 5389684 - 5389721
Alignment:
Q |
124 |
ttgactccaagagtaagtctatagacttactccaaatc |
161 |
Q |
|
|
||||||||||||||||||||| |||||||||||||||| |
|
|
T |
5389684 |
ttgactccaagagtaagtctaaagacttactccaaatc |
5389721 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 174
Target Start/End: Complemental strand, 10296992 - 10296936
Alignment:
Q |
118 |
gatattttgactccaagagtaagtctatagacttactccaaatcttggccattaatt |
174 |
Q |
|
|
|||||||||||||||||||||||| || ||||||||||||||||| || |||||| |
|
|
T |
10296992 |
gatattttgactccaagagtaagtgtaataacttactccaaatcttgacctttaatt |
10296936 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 196
Target Start/End: Original strand, 14655825 - 14655904
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatgatttag |
196 |
Q |
|
|
||||||||||||||||||||||||| || ||||| ||||||| ||| || |||||| ||||||| || ||||| |||| |
|
|
T |
14655825 |
ggatattttgactccaagagtaagtgtaataacttattccaaattttgacctttaattttaatattgattaatgacttag |
14655904 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 111 - 146
Target Start/End: Complemental strand, 39322603 - 39322568
Alignment:
Q |
111 |
atatatggatattttgactccaagagtaagtctata |
146 |
Q |
|
|
|||||| ||||||||||||||||||||||||||||| |
|
|
T |
39322603 |
atatattgatattttgactccaagagtaagtctata |
39322568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 190
Target Start/End: Complemental strand, 5390207 - 5390141
Alignment:
Q |
124 |
ttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatg |
190 |
Q |
|
|
|||||||| |||||||||||| |||||||||||||||| | ||||| ||| | |||||||| |||| |
|
|
T |
5390207 |
ttgactcctagagtaagtctaaagacttactccaaatcataaccattgattttgatattaattaatg |
5390141 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 175
Target Start/End: Original strand, 14395136 - 14395194
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattc |
175 |
Q |
|
|
||||||||||||||||||||||||| || |||||||||||||||| || ||||||| |
|
|
T |
14395136 |
ggatattttgactccaagagtaagtgtaatatcttactccaaatcttgacctttaattc |
14395194 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 174
Target Start/End: Complemental strand, 14396716 - 14396659
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaatt |
174 |
Q |
|
|
||||||||||||||||||||||||| || |||||||||||||||| || |||||| |
|
|
T |
14396716 |
ggatattttgactccaagagtaagtgtaatatcttactccaaatcttgacctttaatt |
14396659 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 29 - 98
Target Start/End: Original strand, 40223569 - 40223638
Alignment:
Q |
29 |
atgattggttttgtcatctaaaaatgtctaacagcgcatcttcttatccgtttgtcttctattcatatgt |
98 |
Q |
|
|
|||||| |||||| |||| |||||||||||| ||||| ||| || || |||||||||||||||| |||| |
|
|
T |
40223569 |
atgattagttttgccatcaaaaaatgtctaatggcgcagcttattgtctgtttgtcttctattcaaatgt |
40223638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 174
Target Start/End: Complemental strand, 18607769 - 18607713
Alignment:
Q |
118 |
gatattttgactccaagagtaagtctatagacttactccaaatcttggccattaatt |
174 |
Q |
|
|
||||||||||||| |||||||||| || ||||||||||||||||| || |||||| |
|
|
T |
18607769 |
gatattttgactcaaagagtaagtgtaataacttactccaaatcttgacctttaatt |
18607713 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 161
Target Start/End: Original strand, 19970556 - 19970600
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatc |
161 |
Q |
|
|
||||||||||||||||||||||| ||| | || |||||||||||| |
|
|
T |
19970556 |
ggatattttgactccaagagtaactcttttgagttactccaaatc |
19970600 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 161
Target Start/End: Complemental strand, 21022253 - 21022209
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatc |
161 |
Q |
|
|
||||||||||||||||||||||| ||| | || |||||||||||| |
|
|
T |
21022253 |
ggatattttgactccaagagtaactcttttgagttactccaaatc |
21022209 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 174
Target Start/End: Original strand, 41826648 - 41826704
Alignment:
Q |
118 |
gatattttgactccaagagtaagtctatagacttactccaaatcttggccattaatt |
174 |
Q |
|
|
|||||||||||||||||||||||| || |||||||||||||||| || |||||| |
|
|
T |
41826648 |
gatattttgactccaagagtaagtgtaatatcttactccaaatcttgacctttaatt |
41826704 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 44; Significance: 4e-16; HSPs: 26)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 152 - 223
Target Start/End: Complemental strand, 14015027 - 14014956
Alignment:
Q |
152 |
actccaaatcttggccattaattctaatattaatcaatgatttaggttgattattaataattgatatggtag |
223 |
Q |
|
|
|||||||||| ||||| ||||| |||||||| || |||||||||| ||||||| |||||||||||||||||| |
|
|
T |
14015027 |
actccaaatcatggcctttaatcctaatattgattaatgatttagattgattaataataattgatatggtag |
14014956 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 115 - 181
Target Start/End: Complemental strand, 5064527 - 5064461
Alignment:
Q |
115 |
atggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatat |
181 |
Q |
|
|
|||||||||||||||||||| |||||||| || |||| |||||||||||| || |||||| |||||| |
|
|
T |
5064527 |
atggatattttgactccaagcgtaagtctttaaacttcctccaaatcttgtcccttaattttaatat |
5064461 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 6946589 - 6946524
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
||||||||||||||||||||||||| || |||||||||||||||| || |||||||||||||| |
|
|
T |
6946589 |
ggatattttgactccaagagtaagtgtaatatcttactccaaatcttgacctttaattctaatatt |
6946524 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 26043724 - 26043789
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
||||||||||||||||||||||||| || |||||||||||||||| || |||||||||||||| |
|
|
T |
26043724 |
ggatattttgactccaagagtaagtgtaatatcttactccaaatcttgacctttaattctaatatt |
26043789 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 181
Target Start/End: Complemental strand, 41185615 - 41185560
Alignment:
Q |
126 |
gactccaagagtaagtctatagacttactccaaatcttggccattaattctaatat |
181 |
Q |
|
|
||||||||||| || |||||||| |||||||||||||||||| |||||| |||||| |
|
|
T |
41185615 |
gactccaagagcaaatctatagaattactccaaatcttggcctttaattttaatat |
41185560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 124 - 190
Target Start/End: Complemental strand, 22405374 - 22405308
Alignment:
Q |
124 |
ttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatg |
190 |
Q |
|
|
|||||| |||||||||||||| | ||||||||||||||||| ||||| ||| ||||| |||| |||| |
|
|
T |
22405374 |
ttgacttcaagagtaagtctaaatacttactccaaatcttgaccattcattttaataataattaatg |
22405308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 126 - 164
Target Start/End: Original strand, 54157295 - 54157333
Alignment:
Q |
126 |
gactccaagagtaagtctatagacttactccaaatcttg |
164 |
Q |
|
|
||||||||||||||||||| ||||||||||||||||||| |
|
|
T |
54157295 |
gactccaagagtaagtctaaagacttactccaaatcttg |
54157333 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 1949921 - 1949986
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
||||||||||||||||| ||||||| || |||||||||||||||| || |||||||||||||| |
|
|
T |
1949921 |
ggatattttgactccaaaagtaagtgtaatatcttactccaaatcttgacctttaattctaatatt |
1949986 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 1953563 - 1953498
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
||||||||||||||||||||||||| || ||||||||||||||| || |||||||||||||| |
|
|
T |
1953563 |
ggatattttgactccaagagtaagtgtaatatcttactccaaatcttaacctttaattctaatatt |
1953498 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 174
Target Start/End: Original strand, 6944737 - 6944794
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaatt |
174 |
Q |
|
|
||||||||||||||||||||||||| || ||||||||||||||||| || |||||| |
|
|
T |
6944737 |
ggatattttgactccaagagtaagtgtaataacttactccaaatcttgacctttaatt |
6944794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 13265512 - 13265577
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
||||||||||||||||||||||||| || |||||||||||||||| || |||||| ||||||| |
|
|
T |
13265512 |
ggatattttgactccaagagtaagtgtaatatcttactccaaatcttgacctttaattttaatatt |
13265577 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 26045102 - 26045037
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
||||||||||||||||||||||||| || |||||| ||||||||| || |||||||||||||| |
|
|
T |
26045102 |
ggatattttgactccaagagtaagtgtaatatcttactacaaatcttgacctttaattctaatatt |
26045037 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 190
Target Start/End: Original strand, 27109770 - 27109843
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatg |
190 |
Q |
|
|
|||||| |||||||||||||||||| || | |||||||||||||| ||| |||||| |||||||||||||| |
|
|
T |
27109770 |
ggatatattgactccaagagtaagtgcttaaagttactccaaatcttagcccttaatttcaatattaatcaatg |
27109843 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 214
Target Start/End: Complemental strand, 47371055 - 47370958
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatgatttaggttgattattaataattg |
214 |
Q |
|
|
||||||||||||||||||||||||| | | | ||||| || |||||| || ||||||||||||| ||| |||| | || ||||||| ||||||||| |
|
|
T |
47371055 |
ggatattttgactccaagagtaagtttgttaagttacttcacatcttgacctttaattctaatatcaattaatggctaagattgattaataataattg |
47370958 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 118 - 161
Target Start/End: Complemental strand, 32527594 - 32527551
Alignment:
Q |
118 |
gatattttgactccaagagtaagtctatagacttactccaaatc |
161 |
Q |
|
|
||||||||||||| |||||||||| | ||||||||||||||||| |
|
|
T |
32527594 |
gatattttgactctaagagtaagtttgtagacttactccaaatc |
32527551 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 127 - 190
Target Start/End: Original strand, 53993678 - 53993741
Alignment:
Q |
127 |
actccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatg |
190 |
Q |
|
|
|||||||||||||||||| ||| ||||||| |||| ||||| |||||| ||||| || |||||| |
|
|
T |
53993678 |
actccaagagtaagtctaaagagttactcccaatcatggcctttaattttaataatagtcaatg |
53993741 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 175
Target Start/End: Complemental strand, 5045939 - 5045881
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattc |
175 |
Q |
|
|
||||||||||||||||||||||||| || |||||||||||||||| || ||||||| |
|
|
T |
5045939 |
ggatattttgactccaagagtaagtgtaatatcttactccaaatcttgacctttaattc |
5045881 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 52
Target Start/End: Original strand, 7536718 - 7536764
Alignment:
Q |
6 |
gatccataaatgttatgtttaaaatgattggttttgtcatctaaaaa |
52 |
Q |
|
|
||||||| ||||||||||||| ||||||||||||||| ||| ||||| |
|
|
T |
7536718 |
gatccatgaatgttatgtttacaatgattggttttgtgatccaaaaa |
7536764 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 196
Target Start/End: Complemental strand, 22341632 - 22341555
Alignment:
Q |
119 |
atattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatgatttag |
196 |
Q |
|
|
||||||||||||||||||||||| || ||||||||||||| ||| || |||||| |||||| || ||||| |||| |
|
|
T |
22341632 |
atattttgactccaagagtaagtgtaataacttactccaaattttgacctttaattgcaatattgattaatgacttag |
22341555 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 31 - 116
Target Start/End: Complemental strand, 23605025 - 23604940
Alignment:
Q |
31 |
gattggttttgtcatctaaaaatgtctaacagcgcatcttcttatccgtttgtcttctattcatatgttgctaatccttgatatat |
116 |
Q |
|
|
||||| |||||||||| ||||| ||||| | ||||| ||| || |||| ||||||||||||||| ||| ||||| ||||||||| |
|
|
T |
23605025 |
gattgattttgtcatccaaaaaggtctagcggcgcaacttgttgtccggttgtcttctattcatgtgtaaataatcattgatatat |
23604940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 160
Target Start/End: Original strand, 23638373 - 23638406
Alignment:
Q |
127 |
actccaagagtaagtctatagacttactccaaat |
160 |
Q |
|
|
|||||||||||||||||| ||||||||||||||| |
|
|
T |
23638373 |
actccaagagtaagtctaaagacttactccaaat |
23638406 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 174
Target Start/End: Complemental strand, 23941823 - 23941766
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaatt |
174 |
Q |
|
|
||||||||||||||||||| ||||| | | |||||||||||||||| ||| |||||| |
|
|
T |
23941823 |
ggatattttgactccaagaataagtttgtttacttactccaaatcttagcctttaatt |
23941766 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 56162244 - 56162309
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
||||||||||||||||||||||||| || ||||||| |||||||| | |||||||||||||| |
|
|
T |
56162244 |
ggatattttgactccaagagtaagtgtaatatcttactcaaaatcttgatctttaattctaatatt |
56162309 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 56164215 - 56164150
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
||||||||| ||||||||||||||| || |||||||||||| ||| || |||||||||||||| |
|
|
T |
56164215 |
ggatatttttactccaagagtaagtgtaatatcttactccaaattttgacctttaattctaatatt |
56164150 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 157
Target Start/End: Complemental strand, 15541153 - 15541113
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactcca |
157 |
Q |
|
|
||||||||||||| ||||||||| |||||||| |||||||| |
|
|
T |
15541153 |
ggatattttgacttcaagagtaactctatagaattactcca |
15541113 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 145
Target Start/End: Complemental strand, 35134484 - 35134456
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctat |
145 |
Q |
|
|
||||||||||||||||||||||||||||| |
|
|
T |
35134484 |
ggatattttgactccaagagtaagtctat |
35134456 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0119 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 2)
Name: scaffold0119
Description:
Target: scaffold0119; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 214
Target Start/End: Complemental strand, 3875 - 3778
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatgatttaggttgattattaataattg |
214 |
Q |
|
|
||||||||||||||||||||||||| | | |||||||| ||||||||| ||||||||||||| ||| |||| || || ||||||| ||||||||| |
|
|
T |
3875 |
ggatattttgactccaagagtaagtttgttatgttactccacatcttggcctttaattctaatatcaattaatggttaagattgattaataataattg |
3778 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0119; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 214
Target Start/End: Complemental strand, 15930 - 15833
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatgatttaggttgattattaataattg |
214 |
Q |
|
|
||||||||||||||||||||||||| | | |||||||| ||||||||| ||||||||||||| ||| |||| || || ||||||| ||||||||| |
|
|
T |
15930 |
ggatattttgactccaagagtaagtttgttatgttactccacatcttggcctttaattctaatatcaattaatggttaagattgattaataataattg |
15833 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 18)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 26666918 - 26667015
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatgatttaggttgattattaataattg |
214 |
Q |
|
|
||||||||||||||||||||||||| | | |||||||| ||||||||| ||||||||||||| ||| |||| || || ||||||| ||||||||| |
|
|
T |
26666918 |
ggatattttgactccaagagtaagtttgttatgttactccacatcttggcctttaattctaatatcaattaatggttaagattgattaataataattg |
26667015 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 117 - 199
Target Start/End: Complemental strand, 13703348 - 13703266
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatgatttaggtt |
199 |
Q |
|
|
||||||||||||||||||||||||| || |||||||||||||||| || |||||||||||||| | |||| |||||||| |
|
|
T |
13703348 |
ggatattttgactccaagagtaagtgtaacatcttactccaaatcttgacctttaattctaatattggttaatggtttaggtt |
13703266 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 3645541 - 3645606
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
||||||||||||||||||||||||| || |||||||||||||||| || |||||||||||||| |
|
|
T |
3645541 |
ggatattttgactccaagagtaagtgtaatatcttactccaaatcttgacctttaattctaatatt |
3645606 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 3646727 - 3646662
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
||||||||||||||||||||||||| || |||||||||||||||| || |||||||||||||| |
|
|
T |
3646727 |
ggatattttgactccaagagtaagtgtaatatcttactccaaatcttgacctttaattctaatatt |
3646662 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 16008233 - 16008298
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
||||||||||||||||||||||||| || |||||||||||||||| || |||||||||||||| |
|
|
T |
16008233 |
ggatattttgactccaagagtaagtgtaatatcttactccaaatcttgacctttaattctaatatt |
16008298 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 25136633 - 25136568
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
||||||||||||||||||||||||| || |||||||||||||||| || |||||||||||||| |
|
|
T |
25136633 |
ggatattttgactccaagagtaagtgtaatatcttactccaaatcttgacctttaattctaatatt |
25136568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 190
Target Start/End: Complemental strand, 2480053 - 2479980
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatg |
190 |
Q |
|
|
|||||| |||||||||||||||||| || | |||||||||||||| ||| |||||| |||||||||||||| |
|
|
T |
2480053 |
ggatatattgactccaagagtaagtgcttaaagttactccaaatcttagcccttaatttcaatattaatcaatg |
2479980 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 25133285 - 25133350
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
||||||||||||||||||||||||| || |||||||||||||||| | |||||||||||||| |
|
|
T |
25133285 |
ggatattttgactccaagagtaagtgtaatatcttactccaaatcttgacatttaattctaatatt |
25133350 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 196
Target Start/End: Complemental strand, 7191696 - 7191617
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatgatttag |
196 |
Q |
|
|
||||||||||||||||||||||||| || ||||||| ||||||||| | ||||||| ||| ||||| ||||| |||| |
|
|
T |
7191696 |
ggatattttgactccaagagtaagtttaataacttacttcaaatcttgacatttaattccaattttaattaatgacttag |
7191617 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 179
Target Start/End: Original strand, 11324763 - 11324818
Alignment:
Q |
124 |
ttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaat |
179 |
Q |
|
|
||||||||||||||||||||| | |||||||||||||| || ||||| ||| |||| |
|
|
T |
11324763 |
ttgactccaagagtaagtctaaacacttactccaaatcatgaccattcattttaat |
11324818 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 179
Target Start/End: Original strand, 13220893 - 13220948
Alignment:
Q |
124 |
ttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaat |
179 |
Q |
|
|
||||||||||||||||||||| | |||||||||||||| || ||||| ||| |||| |
|
|
T |
13220893 |
ttgactccaagagtaagtctaaacacttactccaaatcatgaccattcattttaat |
13220948 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 124 - 179
Target Start/End: Complemental strand, 13225262 - 13225207
Alignment:
Q |
124 |
ttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaat |
179 |
Q |
|
|
||||||||||||||||||||| | |||||||||||||| || ||||| ||| |||| |
|
|
T |
13225262 |
ttgactccaagagtaagtctaaacacttactccaaatcatgaccattcattttaat |
13225207 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 175
Target Start/End: Original strand, 13220044 - 13220102
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattc |
175 |
Q |
|
|
||||||||||||||||||||||||| || ||||||||||||| ||| || ||||||| |
|
|
T |
13220044 |
ggatattttgactccaagagtaagtgtaataacttactccaaattttgacctttaattc |
13220102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 211
Target Start/End: Original strand, 35073487 - 35073581
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatattaatcaatgatttaggttgattattaataa |
211 |
Q |
|
|
||||||||||||||||||||||| | | | |||||||||||||||| | | |||||| || | | ||| |||| ||||| ||||||| |||||| |
|
|
T |
35073487 |
ggatattttgactccaagagtaaatttgttcacttactccaaatcttagtctttaattgtattttcaattaatggtttagattgattaataataa |
35073581 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 13701708 - 13701773
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
||||||||||||||||||||||||| || |||||||||||| ||| || |||||| ||||||| |
|
|
T |
13701708 |
ggatattttgactccaagagtaagtgtaatatcttactccaaattttgacctttaattttaatatt |
13701773 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 157
Target Start/End: Complemental strand, 21777897 - 21777857
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactcca |
157 |
Q |
|
|
||||||||||||||||||||||| |||| ||| |||||||| |
|
|
T |
21777897 |
ggatattttgactccaagagtaactctaaagagttactcca |
21777857 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 157
Target Start/End: Original strand, 25344850 - 25344890
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactcca |
157 |
Q |
|
|
|||||| ||||||||||||||||||||| ||| |||||||| |
|
|
T |
25344850 |
ggatatattgactccaagagtaagtctaaagagttactcca |
25344890 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 157
Target Start/End: Complemental strand, 29414582 - 29414542
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactcca |
157 |
Q |
|
|
||||||||||||||||||||||| |||| ||| |||||||| |
|
|
T |
29414582 |
ggatattttgactccaagagtaactctaaagagttactcca |
29414542 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 38; Significance: 0.000000000001; HSPs: 12)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 19386862 - 19386797
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
||||||||||||||||||||||||| || |||||||||||||||| || |||||||||||||| |
|
|
T |
19386862 |
ggatattttgactccaagagtaagtgtaatatcttactccaaatcttgacctttaattctaatatt |
19386797 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 182
Target Start/End: Complemental strand, 39832294 - 39832229
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
||||||||||||||||||||||||| || |||||||||||||||| || |||||||||||||| |
|
|
T |
39832294 |
ggatattttgactccaagagtaagtgtaatatcttactccaaatcttgacctttaattctaatatt |
39832229 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 118 - 182
Target Start/End: Complemental strand, 32021201 - 32021137
Alignment:
Q |
118 |
gatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
|||||||||||||||||||||||| || |||||||||||||||| || |||||||||||||| |
|
|
T |
32021201 |
gatattttgactccaagagtaagtgtaatatcttactccaaatcttgacctttaattctaatatt |
32021137 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 117 - 182
Target Start/End: Original strand, 39830952 - 39831017
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
||||||||||||||||||||||||| || |||||||||||| ||| || |||||||||||||| |
|
|
T |
39830952 |
ggatattttgactccaagagtaagtgtaatatcttactccaaattttgacctttaattctaatatt |
39831017 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 118 - 182
Target Start/End: Original strand, 2396118 - 2396182
Alignment:
Q |
118 |
gatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattctaatatt |
182 |
Q |
|
|
|||||||||||||||||||||||| || |||||||||||||||| | |||||||||||||| |
|
|
T |
2396118 |
gatattttgactccaagagtaagtgtaatatcttactccaaatcttgacttttaattctaatatt |
2396182 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 117 - 164
Target Start/End: Complemental strand, 36671126 - 36671079
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttg |
164 |
Q |
|
|
||||||||||||||||||||||||| || ||||||||||||||||| |
|
|
T |
36671126 |
ggatattttgactccaagagtaagtgtaataacttactccaaatcttg |
36671079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 117 - 175
Target Start/End: Original strand, 11511046 - 11511104
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaattc |
175 |
Q |
|
|
||||||||||||||||||||||||| || |||||||||||||||| || ||||||| |
|
|
T |
11511046 |
ggatattttgactccaagagtaagtgtaatatcttactccaaatcttgacctttaattc |
11511104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 117 - 174
Target Start/End: Original strand, 27168503 - 27168560
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactccaaatcttggccattaatt |
174 |
Q |
|
|
||||||||||||||||||||||||| || ||||||||| ||||||| || |||||| |
|
|
T |
27168503 |
ggatattttgactccaagagtaagtgtaataacttactcctaatcttgacctttaatt |
27168560 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #9
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 93
Target Start/End: Complemental strand, 4501224 - 4501132
Alignment:
Q |
1 |
tccttgatccataaatgttatgtttaaaatgattggttttgtcatctaaaaatgtctaacagcgcatcttcttatccgtttgtcttctattca |
93 |
Q |
|
|
|||| ||| ||| |||||| |||||| | |||| | ||||||||||||||| ||||| ||||||||||| || |||| ||| ||| |||||| |
|
|
T |
4501224 |
tcctagattcatgaatgttgtgtttacgaggattagctttgtcatctaaaaaggtctagcagcgcatcttattgtccgcttgccttatattca |
4501132 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #10
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 5714998 - 5714954
Alignment:
Q |
8 |
tccataaatgttatgtttaaaatgattggttttgtcatctaaaaa |
52 |
Q |
|
|
|||||||||||| |||||| | |||||||||||||||||||||| |
|
|
T |
5714998 |
tccataaatgttgtgtttatgaagattggttttgtcatctaaaaa |
5714954 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #11
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 157
Target Start/End: Complemental strand, 20009132 - 20009092
Alignment:
Q |
117 |
ggatattttgactccaagagtaagtctatagacttactcca |
157 |
Q |
|
|
|||||| ||||||||||||||||||||| ||| |||||||| |
|
|
T |
20009132 |
ggatatattgactccaagagtaagtctaaagagttactcca |
20009092 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #12
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 118 - 174
Target Start/End: Complemental strand, 32020283 - 32020227
Alignment:
Q |
118 |
gatattttgactccaagagtaagtctatagacttactccaaatcttggccattaatt |
174 |
Q |
|
|
|||||||||||||||||||||||| || |||||||||||||| || || |||||| |
|
|
T |
32020283 |
gatattttgactccaagagtaagtgtaataacttactccaaatcctgacctttaatt |
32020227 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0110 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0110
Description:
Target: scaffold0110; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 93
Target Start/End: Original strand, 47670 - 47754
Alignment:
Q |
9 |
ccataaatgttatgtttaaaatgattggttttgtcatctaaaaatgtctaacagcgcatcttcttatccgtttgtcttctattca |
93 |
Q |
|
|
|||| ||||||||||||| || ||||| |||| |||| |||||||| || | || || ||| || ||||||||||||||||||| |
|
|
T |
47670 |
ccatgaatgttatgtttacaaagattgattttaccatcgaaaaatgtttagcggcacaacttgttgtccgtttgtcttctattca |
47754 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
© Oklahoma State University
This website was viewed 3487 times since January 2019
Visitors: 8727