View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15680_low_13 (Length: 319)

Name: NF15680_low_13
Description: NF15680
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15680_low_13
NF15680_low_13
[»] chr6 (18 HSPs)
chr6 (1-123)||(31976248-31976370)
chr6 (1-128)||(17598549-17598676)
chr6 (1-125)||(32869676-32869800)
chr6 (1-118)||(22880636-22880753)
chr6 (1-102)||(11427639-11427740)
chr6 (1-123)||(31110739-31110859)
chr6 (1-123)||(6209443-6209565)
chr6 (1-124)||(15508002-15508125)
chr6 (1-92)||(23128105-23128196)
chr6 (1-123)||(15990020-15990142)
chr6 (1-123)||(30341338-30341460)
chr6 (1-124)||(4231547-4231670)
chr6 (57-128)||(12732477-12732548)
chr6 (1-124)||(31109378-31109501)
chr6 (1-118)||(28536466-28536581)
chr6 (1-123)||(29857827-29857949)
chr6 (1-79)||(30870058-30870136)
chr6 (1-125)||(31953008-31953132)
[»] chr1 (31 HSPs)
chr1 (1-123)||(32813247-32813369)
chr1 (1-125)||(27564713-27564837)
chr1 (1-123)||(2581915-2582037)
chr1 (1-123)||(50630458-50630580)
chr1 (1-124)||(9474854-9474977)
chr1 (1-123)||(3000319-3000441)
chr1 (1-127)||(37649194-37649320)
chr1 (1-128)||(38595149-38595276)
chr1 (1-123)||(43132-43254)
chr1 (1-123)||(37926416-37926538)
chr1 (1-123)||(41758805-41758927)
chr1 (1-127)||(47452298-47452424)
chr1 (1-123)||(51898661-51898783)
chr1 (1-118)||(44548354-44548471)
chr1 (1-125)||(3302511-3302635)
chr1 (1-123)||(38632299-38632421)
chr1 (1-123)||(49811505-49811627)
chr1 (1-124)||(48716260-48716383)
chr1 (13-127)||(26440730-26440844)
chr1 (1-128)||(5958978-5959105)
chr1 (1-123)||(45044538-45044660)
chr1 (1-122)||(44453980-44454101)
chr1 (8-128)||(8346373-8346493)
chr1 (1-124)||(50590978-50591101)
chr1 (1-126)||(6260867-6260992)
chr1 (1-85)||(13414799-13414883)
chr1 (1-124)||(41608471-41608594)
chr1 (1-103)||(11152356-11152458)
chr1 (13-118)||(26274437-26274542)
chr1 (1-75)||(48489348-48489422)
chr1 (1-127)||(47748439-47748564)
[»] chr5 (28 HSPs)
chr5 (1-126)||(28177772-28177897)
chr5 (1-123)||(6679698-6679820)
chr5 (1-123)||(15409588-15409710)
chr5 (1-123)||(36732920-36733042)
chr5 (1-125)||(40145405-40145529)
chr5 (1-124)||(26720515-26720638)
chr5 (1-124)||(26990264-26990387)
chr5 (1-123)||(2740274-2740396)
chr5 (1-118)||(18520862-18520979)
chr5 (1-129)||(14831808-14831936)
chr5 (1-116)||(13811659-13811774)
chr5 (1-125)||(33149616-33149740)
chr5 (1-124)||(35785198-35785321)
chr5 (1-123)||(31008988-31009110)
chr5 (1-123)||(35943870-35943992)
chr5 (1-127)||(42414280-42414406)
chr5 (1-123)||(2252146-2252268)
chr5 (1-123)||(3921243-3921365)
chr5 (1-75)||(39557495-39557569)
chr5 (1-123)||(39688875-39688997)
chr5 (2-124)||(6259980-6260102)
chr5 (1-80)||(21370047-21370126)
chr5 (1-123)||(20073494-20073616)
chr5 (57-118)||(16327906-16327967)
chr5 (60-119)||(10356638-10356698)
chr5 (1-79)||(9603857-9603935)
chr5 (64-118)||(36875644-36875698)
chr5 (1-41)||(36875590-36875630)
[»] chr4 (30 HSPs)
chr4 (1-124)||(31910191-31910314)
chr4 (1-134)||(42044345-42044478)
chr4 (160-274)||(26125983-26126096)
chr4 (1-128)||(50052406-50052533)
chr4 (1-123)||(48183027-48183149)
chr4 (1-124)||(50526149-50526272)
chr4 (1-89)||(41823916-41824004)
chr4 (1-128)||(480425-480552)
chr4 (1-124)||(6034043-6034166)
chr4 (1-124)||(11511440-11511563)
chr4 (1-127)||(3481650-3481776)
chr4 (1-126)||(40574776-40574901)
chr4 (1-123)||(41236347-41236469)
chr4 (1-124)||(54473511-54473634)
chr4 (1-123)||(29234223-29234345)
chr4 (1-123)||(29239886-29240008)
chr4 (1-96)||(24995085-24995180)
chr4 (1-79)||(23608279-23608357)
chr4 (1-79)||(48647704-48647782)
chr4 (1-119)||(53352544-53352661)
chr4 (1-123)||(55475191-55475313)
chr4 (58-123)||(29547994-29548059)
chr4 (23-123)||(47986208-47986308)
chr4 (1-123)||(8343141-8343263)
chr4 (1-123)||(19670694-19670816)
chr4 (23-123)||(29977885-29977985)
chr4 (1-103)||(17983721-17983823)
chr4 (1-123)||(50813870-50813992)
chr4 (1-125)||(18924473-18924597)
chr4 (23-123)||(32766958-32767058)
[»] chr3 (35 HSPs)
chr3 (6-125)||(26141515-26141634)
chr3 (1-125)||(53982009-53982133)
chr3 (1-124)||(20764893-20765016)
chr3 (1-123)||(11347900-11348022)
chr3 (1-123)||(51419338-51419460)
chr3 (1-119)||(52629304-52629422)
chr3 (1-124)||(33644199-33644322)
chr3 (1-123)||(41189742-41189864)
chr3 (1-123)||(17470405-17470527)
chr3 (1-123)||(54868873-54868995)
chr3 (1-123)||(49607414-49607536)
chr3 (1-120)||(26754698-26754817)
chr3 (1-123)||(8076393-8076515)
chr3 (1-123)||(47531865-47531987)
chr3 (1-118)||(31456694-31456811)
chr3 (13-118)||(48587081-48587186)
chr3 (6-123)||(11907371-11907488)
chr3 (14-123)||(27714882-27714991)
chr3 (1-126)||(39670009-39670133)
chr3 (57-123)||(8956762-8956828)
chr3 (57-123)||(11095387-11095453)
chr3 (1-123)||(14623817-14623939)
chr3 (1-123)||(24699932-24700054)
chr3 (1-118)||(30801711-30801828)
chr3 (1-123)||(36707406-36707524)
chr3 (1-124)||(45058531-45058653)
chr3 (1-79)||(1758434-1758512)
chr3 (57-123)||(33118885-33118951)
chr3 (57-123)||(35965808-35965874)
chr3 (1-71)||(48375684-48375754)
chr3 (2-118)||(25407126-25407243)
chr3 (2-118)||(13898034-13898150)
chr3 (57-123)||(35536626-35536692)
chr3 (1-79)||(36331307-36331385)
chr3 (58-119)||(25395368-25395429)
[»] chr7 (35 HSPs)
chr7 (1-125)||(19329840-19329964)
chr7 (1-122)||(35522877-35522998)
chr7 (4-123)||(46033782-46033901)
chr7 (1-124)||(38267039-38267162)
chr7 (1-132)||(38837209-38837339)
chr7 (1-118)||(3784000-3784117)
chr7 (1-128)||(35137528-35137655)
chr7 (1-123)||(8080361-8080483)
chr7 (14-123)||(36361904-36362013)
chr7 (13-123)||(3434562-3434672)
chr7 (13-123)||(7389389-7389499)
chr7 (1-123)||(26296644-26296766)
chr7 (29-123)||(46374808-46374902)
chr7 (14-123)||(36362026-36362135)
chr7 (1-123)||(40957707-40957829)
chr7 (1-118)||(32951471-32951588)
chr7 (1-126)||(31735881-31735999)
chr7 (1-123)||(4999492-4999614)
chr7 (1-123)||(19436165-19436287)
chr7 (1-123)||(22343361-22343483)
chr7 (1-123)||(36208173-36208295)
chr7 (1-128)||(8238207-8238335)
chr7 (1-128)||(3694362-3694489)
chr7 (23-126)||(21234398-21234501)
chr7 (1-124)||(39255902-39256024)
chr7 (1-79)||(10343541-10343619)
chr7 (1-123)||(41915741-41915863)
chr7 (1-124)||(32564404-32564527)
chr7 (1-128)||(35468833-35468960)
chr7 (1-123)||(18207180-18207301)
chr7 (1-118)||(32045842-32045959)
chr7 (23-123)||(38044197-38044297)
chr7 (1-52)||(11044249-11044300)
chr7 (1-123)||(40846091-40846213)
chr7 (1-129)||(7727900-7728028)
[»] chr2 (34 HSPs)
chr2 (1-125)||(28381633-28381757)
chr2 (13-125)||(40613892-40614004)
chr2 (1-126)||(13438340-13438465)
chr2 (1-123)||(42257193-42257315)
chr2 (1-123)||(2533124-2533245)
chr2 (1-123)||(9058480-9058602)
chr2 (1-123)||(33436078-33436200)
chr2 (1-118)||(28863460-28863577)
chr2 (1-124)||(40701477-40701600)
chr2 (1-123)||(17473020-17473142)
chr2 (1-123)||(30915463-30915585)
chr2 (1-123)||(32505626-32505748)
chr2 (1-123)||(36168836-36168958)
chr2 (1-123)||(38273120-38273242)
chr2 (1-132)||(20700806-20700937)
chr2 (1-123)||(7465713-7465835)
chr2 (1-123)||(10249360-10249482)
chr2 (1-118)||(19930798-19930915)
chr2 (1-124)||(4060684-4060807)
chr2 (23-126)||(27864701-27864804)
chr2 (1-128)||(45097713-45097840)
chr2 (1-123)||(33436211-33436333)
chr2 (1-123)||(38732354-38732476)
chr2 (14-123)||(5574479-5574588)
chr2 (1-96)||(13365380-13365475)
chr2 (1-123)||(38882789-38882913)
chr2 (1-79)||(3440023-3440101)
chr2 (1-79)||(3737987-3738065)
chr2 (1-123)||(26891482-26891604)
chr2 (1-126)||(43490118-43490243)
chr2 (1-124)||(17819982-17820105)
chr2 (1-103)||(2997465-2997567)
chr2 (57-123)||(17823784-17823850)
chr2 (58-123)||(15428775-15428840)
[»] chr8 (30 HSPs)
chr8 (1-128)||(43414559-43414686)
chr8 (1-128)||(504099-504226)
chr8 (1-124)||(40423921-40424044)
chr8 (1-123)||(12831047-12831169)
chr8 (1-121)||(10621065-10621185)
chr8 (1-124)||(15048159-15048282)
chr8 (1-125)||(15197331-15197455)
chr8 (1-125)||(23122575-23122699)
chr8 (1-116)||(14547929-14548044)
chr8 (1-123)||(1179918-1180040)
chr8 (1-123)||(10284609-10284731)
chr8 (1-123)||(37038479-37038601)
chr8 (1-125)||(34012274-34012398)
chr8 (1-123)||(4854841-4854963)
chr8 (1-123)||(44507065-44507187)
chr8 (1-118)||(5957835-5957952)
chr8 (1-128)||(16056379-16056506)
chr8 (1-123)||(42221515-42221637)
chr8 (4-103)||(8841413-8841512)
chr8 (1-80)||(9122228-9122307)
chr8 (1-128)||(16383372-16383499)
chr8 (1-123)||(15258907-15259029)
chr8 (1-123)||(24307771-24307893)
chr8 (1-68)||(40467755-40467822)
chr8 (1-123)||(34307216-34307338)
chr8 (60-128)||(24307624-24307692)
chr8 (57-125)||(20074968-20075036)
chr8 (4-52)||(25838260-25838308)
chr8 (1-128)||(30479452-30479579)
chr8 (58-123)||(32032725-32032789)
[»] scaffold0321 (1 HSPs)
scaffold0321 (1-128)||(10087-10214)
[»] scaffold1268 (1 HSPs)
scaffold1268 (1-126)||(907-1032)
[»] scaffold1267 (1 HSPs)
scaffold1267 (1-126)||(907-1032)
[»] scaffold0110 (1 HSPs)
scaffold0110 (1-124)||(8841-8964)
[»] scaffold0237 (1 HSPs)
scaffold0237 (1-123)||(4029-4151)
[»] scaffold0316 (1 HSPs)
scaffold0316 (14-75)||(17102-17163)
[»] scaffold0018 (1 HSPs)
scaffold0018 (1-97)||(152524-152620)


Alignment Details
Target: chr6 (Bit Score: 83; Significance: 3e-39; HSPs: 18)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 31976370 - 31976248
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| ||||||||||||||||||| || ||||||| || ||||||||||||||||||||||| ||||| ||||||||||| ||    
T  31976370 aagagagaagaggagagaaaagagaaagtgtgcttgtgcggggttcatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtatattgccaccta 31976271  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||||| |||||||||||||||||    
T  31976270 aggatgtctatgtatcataactc 31976248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 17598676 - 17598549
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||  | ||||||||||||||||||||||| ||| ||| ||||||||| ||    
T  17598676 aagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgacaacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccaccta 17598577  T
Q  101 aggatatctatgtatcataactcatttt 128  Q
    ||| | |||||||||||| |||||||||    
T  17598576 agggtgtctatgtatcattactcatttt 17598549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 32869800 - 32869676
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||  | ||||||||||||||||||||||| ||||| | ||||||||| ||    
T  32869800 aagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 32869701  T
Q  101 aggatatctatgtatcataactcat 125  Q
    ||| | |||||||||| | ||||||    
T  32869700 agggtgtctatgtatctttactcat 32869676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 22880636 - 22880753
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||  | |||||||| |||||||||||||| ||||| | ||||||||| ||    
T  22880636 aagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagaattttgtgtgggtgtcaaagggtgtattgccaccta 22880735  T
Q  101 aggatatctatgtatcat 118  Q
    ||| | ||||||||||||    
T  22880736 agggtgtctatgtatcat 22880753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 102
Target Start/End: Complemental strand, 11427740 - 11427639
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| |||||||||||||||||||  |||| ||||  | ||||||||||||||||||||||| ||||||| ||||||||| ||    
T  11427740 aagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccaccta 11427641  T
Q  101 ag 102  Q
    ||    
T  11427640 ag 11427639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 31110739 - 31110859
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||||||| ||||||||||||||||| | ||||||||| | | ||||||||||||  |||| |||| ||||| | ||||||||| ||    
T  31110739 aagagagaagagtagagaaaagagaaagtgtgcttgtgcagggtccatgtggttacgtgtcagatttt--tgtgagtgtcaaagggtgtattgccaccta 31110836  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||||| |||||||||||||||||    
T  31110837 aggatgtctatgtatcataactc 31110859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 6209443 - 6209565
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| |||||||||||| |||||| ||||| ||||  | ||| |||||||||||||| |||| |||   | ||||||||| ||    
T  6209443 aagagagaagaggagagaaaagagaaagtgtgctagtgcggggtccacgtgactacgtgacagatttttgtgtgagtgtcaaatagtgtattgccaccta 6209542  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | |||||||||||| ||||    
T  6209543 agggtgtctatgtatcattactc 6209565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 15508002 - 15508125
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||  ||| ||||||||| ||||||||| |||||| ||  ||  |||||||||||||||||||||| || || | ||||||||| ||    
T  15508002 aagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccaccta 15508101  T
Q  101 aggatatctatgtatcataactca 124  Q
    ||| | | ||||||||||||||||    
T  15508102 agggtgtttatgtatcataactca 15508125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 92
Target Start/End: Original strand, 23128105 - 23128196
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatatt 92  Q
    |||||| |||| ||||||||| |||||||||||||||| ||  |||| ||||  | ||||||||||||||||||||||| ||||||| ||||    
T  23128105 aagagaaaagaggagagaaaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtatt 23128196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 15990020 - 15990142
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||  ||| ||||||||| ||||||||| |||||| ||  ||  |||||||||||||||||||||| || || | ||||||||| ||    
T  15990020 aagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccaccta 15990119  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | | |||||||||||||||    
T  15990120 agggtgtttatgtatcataactc 15990142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 30341338 - 30341460
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||  ||| ||||||||| ||||||||| |||||| ||  ||  |||||||||||||||||||||| || || | ||||||||| ||    
T  30341338 aagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccaccta 30341437  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | | |||||||||||||||    
T  30341438 agggtgtttatgtatcataactc 30341460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 4231670 - 4231547
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||  ||| ||||||||| ||||||||| |||||| ||  || ||||||||||||||||||||||  || || | ||||||||| ||    
T  4231670 aagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacgtgtcagatttttgtgtgggtggcaaggggtgtattgccaccta 4231571  T
Q  101 aggatatctatgtatcataactca 124  Q
    | ||| | |||| |||||||||||    
T  4231570 atgatgtttatgaatcataactca 4231547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 57 - 128
Target Start/End: Complemental strand, 12732548 - 12732477
Alignment:
Q  57 gtgtcagatttttgtgtgggtgtaaaaggatatattgccacttaaggatatctatgtatcataactcatttt 128  Q
    ||||||||||||||||||||||| || |  |||||||||||||||| || |||||||||||| |||| ||||    
T  12732548 gtgtcagatttttgtgtgggtgtcaatgattatattgccacttaagaatgtctatgtatcattactcttttt 12732477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 31109378 - 31109501
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||| |||| ||||||||| ||||||||| ||| ||||| ||| | ||||  | ||||||||||||||||||| ||| ||||| | ||||||||| ||    
T  31109378 aagagaaaagaggagagaaaagagaaagtgtacttttgcggggtctacgtgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccaccta 31109477  T
Q  101 aggatatctatgtatcataactca 124  Q
    ||| | |||||  ||||| |||||    
T  31109478 agggtgtctattaatcattactca 31109501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 28536466 - 28536581
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||| |||||  ||| |||| |||||||||||||||| || |||||  ||| |  ||||||||||||||||||||||| || || | ||||||||| ||    
T  28536466 aagagggaagagaagataaaagagaaagtgtgcttgtgtggggtccacatgacc--gtgtcagatttttgtgtgggtgtcaagggttgtattgccaccta 28536563  T
Q  101 aggatatctatgtatcat 118  Q
    ||||| | ||||||||||    
T  28536564 aggatgtttatgtatcat 28536581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 29857949 - 29857827
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||||||| ||||||||||||| |||||  |||| || |  | ||||||||||||||||||||||| ||| | | ||||||||  ||    
T  29857949 aagagagaagagaagagaaaagagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatcta 29857850  T
Q  101 aggatatctatgtatcataactc 123  Q
    | | | |||||||||||| ||||    
T  29857849 aaggtgtctatgtatcattactc 29857827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 30870136 - 30870058
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgt 79  Q
    ||||||||||| ||||| ||| ||||| ||||||||||||| |||||||||| ||  ||| |||||||| | |||||||    
T  30870136 aagagagaagaggagaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacatgttagatttttatatgggtgt 30870058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 31953008 - 31953132
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||  ||| |||||||||| ||||| |  |||||  ||| ||  |||||||||||| ||||||||| || || | ||||||||| ||    
T  31953008 aagagagaagagaagatgaaagagaaagtgtgtttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccaccta 31953107  T
Q  101 aggatatctatgtatcataactcat 125  Q
    ||||| ||||| |||||| ||||||    
T  31953108 aggatgtctatctatcattactcat 31953132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 83; Significance: 3e-39; HSPs: 31)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 32813369 - 32813247
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| ||||||||||||||||||| |||||||||| || ||||||||||||||||||||||| ||||| | ||||||||| ||    
T  32813369 aagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccaccta 32813270  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||||| |||||||||||||||||    
T  32813269 aggatgtctatgtatcataactc 32813247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 27564713 - 27564837
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||| | ||||||||||||||||||||||| ||| | | ||||||||| ||    
T  27564713 aagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccaccta 27564812  T
Q  101 aggatatctatgtatcataactcat 125  Q
    ||||| |||||||||||| ||||||    
T  27564813 aggatgtctatgtatcattactcat 27564837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 2582037 - 2581915
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||||||||||||||||||||||| ||||| ||||  | ||||||||||||||||||||||| ||||| | ||||||||| ||    
T  2582037 aagagagaagaggagagaaaaaagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 2581938  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | |||||||||||| ||||    
T  2581937 agggtgtctatgtatcattactc 2581915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 50630580 - 50630458
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||  | |||||||||||||||||||||   ||||||| ||||||||| ||    
T  50630580 aagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtaacaaaggatgtattgccaccta 50630481  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| |||||||||||||| ||||    
T  50630480 agggtatctatgtatcattactc 50630458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 9474854 - 9474977
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| |||||||||| |||||||| ||||| ||||  | ||||||||||||||||||||||| ||||| | ||||||||| ||    
T  9474854 aagagagaagaggagagaaaagagaaagtgtgtttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 9474953  T
Q  101 aggatatctatgtatcataactca 124  Q
    ||| | |||||||||||| |||||    
T  9474954 agggtgtctatgtatcattactca 9474977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 3000441 - 3000319
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||||||||||||| ||||||||||||||| ||| ||||| ||||  | ||||||||||||||||||||||| ||||| | ||||||||| ||    
T  3000441 aagagagaagatgagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 3000342  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | | |||||||||| ||||    
T  3000341 agggtgtttatgtatcattactc 3000319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 37649320 - 37649194
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| |||||||||  ||||||||||||||||||| | || |||| || ||||||||||||||||||||||| ||||  | ||||||||| ||    
T  37649320 aagagagaagaggagagaaaagggaaagtgtgcttgtgcggaattcacgtgaccacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccaccta 37649221  T
Q  101 aggatatctatgtatcataactcattt 127  Q
    | ||| |||||||||||| ||||||||    
T  37649220 aagatgtctatgtatcattactcattt 37649194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 38595276 - 38595149
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||||||||||||| ||||||||||||||| ||| ||||| ||||  | ||||||||||||||||||||||| ||||| | ||||||||| ||    
T  38595276 aagagagaagatgagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 38595177  T
Q  101 aggatatctatgtatcataactcatttt 128  Q
    | | | | |||||||||| |||| ||||    
T  38595176 aaggtgtttatgtatcattactcttttt 38595149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 43254 - 43132
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||| || ||||||||| ||||||||||||||||||||||||| ||||  | ||||||||||||||||||||||| ||||||| ||||| | | ||    
T  43254 aagagagaggaggagagaaaagagaaagtgtgcttgtgcggagtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtctccta 43155  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||  | |||||||||||| ||||    
T  43154 agactgtctatgtatcattactc 43132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 37926416 - 37926538
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||||||| ||||||||| ||||| |||  ||||||||  || ||||||||||||| ||||||||| ||| ||| ||||||||| ||    
T  37926416 aagagagaagagaagagaaaagagaaagtgtacttgtacgggatccatgtggccacgtgtcagatttttatgtgggtgttaaaagatgtattgccaccta 37926515  T
Q  101 aggatatctatgtatcataactc 123  Q
    | |||||||||||||||||||||    
T  37926516 aagatatctatgtatcataactc 37926538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 41758927 - 41758805
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| |||||||||| |||||||| ||||||||||  | ||||||||||||||||||| ||| ||||| | |||||||| |||    
T  41758927 aagagagaagaggagagaaaagagaaagtgtgtttgtgcggggtccatgtgactacgtgtcagatttttgtgtggttgtcaaagggtgtattgccattta 41758828  T
Q  101 aggatatctatgtatcataactc 123  Q
    | | | |||||||||||| ||||    
T  41758827 atggtgtctatgtatcattactc 41758805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 47452298 - 47452424
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| |||||||||||||||||||  |||| ||||  | |||| |||||||||||||||||| ||||| | |||| |||| ||    
T  47452298 aagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattaccaccta 47452397  T
Q  101 aggatatctatgtatcataactcattt 127  Q
    ||| | |||||||||||| ||||||||    
T  47452398 agggtgtctatgtatcattactcattt 47452424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 51898661 - 51898783
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||| ||| |||||||||||||||||||  |||| ||||  | ||||||||||||||||||||||| ||||| | ||||||||| ||    
T  51898661 aagagagaagaggagaggaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 51898760  T
Q  101 aggatatctatgtatcataactc 123  Q
    | ||| |||||||||||| ||||    
T  51898761 aagatgtctatgtatcattactc 51898783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 44548354 - 44548471
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||  | ||||||||||||||||||||| | ||| | | ||||||||| ||    
T  44548354 aagagagaagaagagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaaatggtgtattgccaccta 44548453  T
Q  101 aggatatctatgtatcat 118  Q
    | ||| ||||||||||||    
T  44548454 aagatgtctatgtatcat 44548471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 3302511 - 3302635
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||||||||  |||||||||||||||||||  || |||||| |||| | |||||||||||||||||||||||  | | |||||||| ||| ||    
T  3302511 aagagagaagatgagatgaaaaagaaagtgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatatattgtcaccta 3302610  T
Q  101 aggatatctatgtatcataactcat 125  Q
    ||||| | |||||||||| ||||||    
T  3302611 aggatgtatatgtatcattactcat 3302635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 38632299 - 38632421
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| | ||||||||||||||||| ||||| ||||  | ||||||||||||||||||| ||| ||| | | ||||||||| ||    
T  38632299 aagagagaagaggagagaaaagaaaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaaaggtgtattgccaccta 38632398  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | |||||||||||| ||||    
T  38632399 agggtgtctatgtatcattactc 38632421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 49811505 - 49811627
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||| || ||   | ||||||||||||||||||| ||| ||| | | ||||| ||| ||    
T  49811505 aagagagaagaggagagaaaagagaaagtgtgcttgtgcggagtctatatggctacgtgtcagatttttgtgtggatgtcaaatggtgtattgtcaccta 49811604  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||||| ||||| |||||||||||    
T  49811605 aggatgtctatctatcataactc 49811627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 48716260 - 48716383
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| || |||||| | ||||||||||||||||| ||||| ||||  | ||||||||||||||||||| ||| ||| | | ||||||||| ||    
T  48716260 aagagagaagaggaaagaaaagataaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaatggtgtattgccaccta 48716359  T
Q  101 aggatatctatgtatcataactca 124  Q
    ||| | |||||||||||| |||||    
T  48716360 agggtgtctatgtatcattactca 48716383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 127
Target Start/End: Complemental strand, 26440844 - 26440730
Alignment:
Q  13 gagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccacttaaggatatctatg 112  Q
    ||||||||| ||||||||||||| |||||  ||||||||  || ||||||||||||||||||||||| ||||| | ||||| ||  ||||||| |||||     
T  26440844 gagagaaaagagaaagtgtgcttatgcgggatccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtattgtcatctaaggatgtctatc 26440745  T
Q  113 tatcataactcattt 127  Q
    |||| ||||||||||    
T  26440744 tatcctaactcattt 26440730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 5958978 - 5959105
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||  ||| ||||||||| ||||||||| |||||| ||| ||  |||||||||||||||||||||| ||  | | ||||||||||||    
T  5958978 aagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagaggtgtattgccactta 5959077  T
Q  101 aggatatctatgtatcataactcatttt 128  Q
    ||| | | ||||||||||||||| ||||    
T  5959078 agggtgtttatgtatcataactcttttt 5959105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 45044538 - 45044660
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||||||| ||||| |||| |||||||| |||||||||   |  |||||||||||||| ||||||| ||| | | ||||||||| ||    
T  45044538 aagagagaagagaagagaaaagagaaaatgtgtttgtgcggggtccatgtggctacatgtcagatttttgtatgggtgtcaaatggtgtattgccaccta 45044637  T
Q  101 aggatatctatgtatcataactc 123  Q
    |||| || |||||||||||||||    
T  45044638 aggaaatgtatgtatcataactc 45044660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 44454101 - 44453980
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||||||||| ||| | |||||||||||||| ||  |||| || | ||  |||||||||||||||||||| | ||  ||| ||||||||||||    
T  44454101 aagagagaagatgagaggaaagaaaaagtgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtgtgggtatcaagagatgtattgccactta 44454002  T
Q  101 aggatatctatgtatcataact 122  Q
    | | | ||||||||||||||||    
T  44454001 aaggtgtctatgtatcataact 44453980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 8 - 128
Target Start/End: Original strand, 8346373 - 8346493
Alignment:
Q  8 aagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccacttaaggatat 107  Q
    |||| ||||||||| ||||||||||||||||| | ||||| ||||  | ||||||||||||||||||||||| ||| | | ||||||||| ||| | |      
T  8346373 aagaggagagaaaagagaaagtgtgcttgtgcagggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccacctaaaggtga 8346472  T
Q  108 ctatgtatcataactcatttt 128  Q
    ||||||||||| |||| ||||    
T  8346473 ctatgtatcattactcttttt 8346493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 50590978 - 50591101
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||  ||| ||||||||| ||||||||| |||||| ||  ||  |||||||||||||||||||||| || || | ||||||||| ||    
T  50590978 aagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccaccta 50591077  T
Q  101 aggatatctatgtatcataactca 124  Q
    ||| | | ||||||||||||||||    
T  50591078 agggtgtttatgtatcataactca 50591101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 6260992 - 6260867
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||  ||| ||||| ||||||| ||||| ||||| |||| ||  ||| |||||||| |||||||||  | || | |||| |||| ||    
T  6260992 aagagagaagaggagaagaaatagaaaatgtgcttatgcggggtccacgtgaccacatgttagatttttatgtgggtgttcaggggtgtattaccaccta 6260893  T
Q  101 aggatatctatgtatcataactcatt 126  Q
    ||||||||||| ||||||||||||||    
T  6260892 aggatatctatctatcataactcatt 6260867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 85
Target Start/End: Complemental strand, 13414883 - 13414799
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaagg 85  Q
    |||||||||||||| |||||| ||||| |||||||||| || ||||| ||||  | |||| |||||||||||||||||| |||||    
T  13414883 aagagagaagatgatagaaaagagaaaatgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagg 13414799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 41608471 - 41608594
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||  ||| ||||||||| ||||| ||| |||||| ||  ||  ||||||||||||||||| |||| || || | ||||||||| ||    
T  41608471 aagagagaagagaagaagaaagagaaagtgtacttgtacggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccaccta 41608570  T
Q  101 aggatatctatgtatcataactca 124  Q
    ||||| | ||||||||||||||||    
T  41608571 aggatgtttatgtatcataactca 41608594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 11152356 - 11152458
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||| |||||||||| |||||||||||| ||| |  |||  | ||||||||||||||||||| |||  |||| | ||||||||| ||    
T  11152356 aagagagaagaggagaggaaaaagaaagcgtgcttgtgcggggtctacatgactacgtgtcagatttttgtgtggatgtcgaagggtgtattgccaccta 11152455  T
Q  101 agg 103  Q
    |||    
T  11152456 agg 11152458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 13 - 118
Target Start/End: Complemental strand, 26274542 - 26274437
Alignment:
Q  13 gagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccacttaaggatatctatg 112  Q
    ||||||||| | ||||||| ||||||| |  |||| ||||  ||||||||||||||| ||||| ||| ||| ||| ||||||||| ||||| | ||||||    
T  26274542 gagagaaaagaaaaagtgtacttgtgcaggatccacgtgactatgtgtcagatttttctgtggatgtcaaatgatgtattgccacataagggtgtctatg 26274443  T
Q  113 tatcat 118  Q
    ||||||    
T  26274442 tatcat 26274437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 75
Target Start/End: Complemental strand, 48489422 - 48489348
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgg 75  Q
    ||||||||||| | ||||||| ||||| |||||||||||||  |||| |||| ||  ||||||||||||||||||    
T  48489422 aagagagaagaggtgagaaaatagaaaatgtgcttgtgcgggatccacgtgaccacatgtcagatttttgtgtgg 48489348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 47748564 - 47748439
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||  ||| ||||||| | |||||||||  ||||| ||  ||  |||||||||||| | ||||||| || || | ||||||||| ||    
T  47748564 aagagagaagagaagaagaaagagaaagtatacttgtgcgggatccatatggccacatgtcagatttttatatgggtgtcaaggg-tgtattgccaccta 47748466  T
Q  101 aggatatctatgtatcataactcattt 127  Q
    ||| ||| |||||||||||||||||||    
T  47748465 agggtatttatgtatcataactcattt 47748439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 2e-36; HSPs: 28)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 28177897 - 28177772
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||| ||||| ||||||||| |||||||||| |||||||| |||||||||| || ||||||||||||||||||||||| ||||| | ||||||||| ||    
T  28177897 aagagggaagaggagagaaaagagaaagtgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 28177798  T
Q  101 aggatatctatgtatcataactcatt 126  Q
    ||||| ||||||||||||||||||||    
T  28177797 aggatgtctatgtatcataactcatt 28177772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 6679820 - 6679698
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| ||||| |||| |||||||| |||||||||| || ||||||||||||||||||||||| ||| | | ||||||||| ||    
T  6679820 aagagagaagaggagagaaaagagaaaatgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccaccta 6679721  T
Q  101 aggatatctatgtatcataactc 123  Q
    | ||| |||||||||||||||||    
T  6679720 aagatgtctatgtatcataactc 6679698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 15409588 - 15409710
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| ||| ||||||||||||||| |||||||||   | ||||||||||||||||||||||| |||| || ||||| ||| ||    
T  15409588 aagagagaagaggagagaaaagagagagtgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgtcaaagaatgtattgtcaccta 15409687  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||||| |||||||||||||||||    
T  15409688 aggatgtctatgtatcataactc 15409710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 36732920 - 36733042
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||  ||||||||||||||||||||||||| ||||| | |||||| || ||    
T  36732920 aagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagggtgtattgctaccta 36733019  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | |||||||||||| ||||    
T  36733020 agggtgtctatgtatcattactc 36733042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 40145529 - 40145405
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||  | ||||||||||||||||||| ||| ||||| | ||||||||| ||    
T  40145529 aagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaagggtgtattgccaccta 40145430  T
Q  101 aggatatctatgtatcataactcat 125  Q
    ||| | |||||||||||| ||||||    
T  40145429 agggtgtctatgtatcattactcat 40145405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 26720638 - 26720515
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||||||| |||||||||||||||||||  ||||||||  || ||||||||||||| ||| ||||| ||||| | ||||||||| ||    
T  26720638 aagagagaagagaagagaaaagagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccaccta 26720539  T
Q  101 aggatatctatgtatcataactca 124  Q
    ||||| ||||||||||||||||||    
T  26720538 aggatgtctatgtatcataactca 26720515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 26990387 - 26990264
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||||||| |||||||||||||||||||  ||||||||  || ||||||||||||| ||| ||||| ||||| | ||||||||| ||    
T  26990387 aagagagaagagaagagaaaagagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaaagggtgtattgccaccta 26990288  T
Q  101 aggatatctatgtatcataactca 124  Q
    ||||| ||||||||||||||||||    
T  26990287 aggatgtctatgtatcataactca 26990264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 2740396 - 2740274
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||  ||||||||| |||||||||||||||||||  |||| ||||  | ||||||||||||||||||||||| ||||| | ||||||||| ||    
T  2740396 aagagagaaggggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 2740297  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||||| |||||||||||| ||||    
T  2740296 aggatgtctatgtatcattactc 2740274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 18520862 - 18520979
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| |||| |||| ||||||||||||||||||| ||||| ||||  | ||||||||||||||||||||||| ||||| | ||||||||| ||    
T  18520862 aagagagaagaggagataaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 18520961  T
Q  101 aggatatctatgtatcat 118  Q
    ||| | ||||||||||||    
T  18520962 agggtgtctatgtatcat 18520979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 14831936 - 14831808
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| |||| ||||||||||||||||||||||||  |||| ||||  | ||||||||||||| ||||||||| ||||| | ||||||||| ||    
T  14831936 aagagagaagaggagaaaaaaaagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccaccta 14831837  T
Q  101 aggatatctatgtatcataactcattttg 129  Q
    ||  | |||||||||||| ||||||||||    
T  14831836 agagtgtctatgtatcattactcattttg 14831808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 13811774 - 13811659
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| |||||| || ||||||||||||||||||| ||||| ||||  | ||||||||||||||||||||||| ||| ||| ||||||||| ||    
T  13811774 aagagagaagaggagagagaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccaccta 13811675  T
Q  101 aggatatctatgtatc 116  Q
    ||| | ||||||||||    
T  13811674 agggtgtctatgtatc 13811659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 33149616 - 33149740
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| |||||||||||||||||||  |||| ||||  | |||||| |||||||||||||||| ||||| | |||| |||| ||    
T  33149616 aagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccaccta 33149715  T
Q  101 aggatatctatgtatcataactcat 125  Q
    ||| | |||||||||||| ||||||    
T  33149716 agggtgtctatgtatcattactcat 33149740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 35785321 - 35785198
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||||||||||||| |||||||||| ||||||||  |||| || |  | ||||||||||||||||||||||| ||| | | ||||||||| ||    
T  35785321 aagagagaagatgagagaaaagagaaagtgtgattgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccaccta 35785222  T
Q  101 aggatatctatgtatcataactca 124  Q
    ||| | |||||||||||| |||||    
T  35785221 agggtgtctatgtatcattactca 35785198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 31009110 - 31008988
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||| ||| |||||||||||||||||||  |||| ||||  | |||||||||||||||||||||||  ||| || ||||| ||| ||    
T  31009110 aagagagaagagaagaggaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtggaagaatgtattgtcaccta 31009011  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||||| | |||||||||||||||    
T  31009010 aggatgtttatgtatcataactc 31008988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 35943870 - 35943992
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||| |||| ||||| ||| |||||||||||||||| ||  |||| || |  | ||||||||||||||||||||||| ||| ||| ||||||||| ||    
T  35943870 aagagaaaagaggagaggaaagagaaagtgtgcttgtgtgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaatgatgtattgccaccta 35943969  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | |||||||||||||||||    
T  35943970 agggtgtctatgtatcataactc 35943992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 127
Target Start/End: Original strand, 42414280 - 42414406
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| || |||||| | ||||||||||||||||| |||||  |||  | ||||||||||||||||||||||| ||||| | ||||||||| ||    
T  42414280 aagagagaagaggaaagaaaagataaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 42414379  T
Q  101 aggatatctatgtatcataactcattt 127  Q
      | | |||||||||||| ||||||||    
T  42414380 ctggtgtctatgtatcattactcattt 42414406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 2252146 - 2252268
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||  ||| ||||||||| ||||||||| |||||| ||  ||  |||||||||||||||||||||| || || | ||||||||| ||    
T  2252146 aagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccaccta 2252245  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||||| | |||||||||||||||    
T  2252246 aggatgtttatgtatcataactc 2252268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 3921243 - 3921365
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||  ||| ||||||||| ||||||||| |||||| ||  ||  |||||||||||||||||||||| || || | ||||||||| ||    
T  3921243 aagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccaccta 3921342  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | | |||||||||||||||    
T  3921343 agggtgtttatgtatcataactc 3921365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 39557495 - 39557569
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgg 75  Q
    ||||||||||| |||| |||| |||||||||| ||||  || ||||||||||||| |||||||||||||||||||    
T  39557495 aagagagaagaggagataaaagagaaagtgtgattgtatggggtccatgtgatcacgtgtcagatttttgtgtgg 39557569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 39688875 - 39688997
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||  ||| ||||||||| ||| ||||| || ||| ||| ||  | |||||||||||||||||||| || |||| ||||||||||||    
T  39688875 aagagagaagaaaagaagaaagagaaagtgtacttatgcggggttcatatgaccacatatcagatttttgtgtgggtgtcaagggatgtattgccactta 39688974  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | | |||||||||||||||    
T  39688975 agggtgtttatgtatcataactc 39688997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 2 - 124
Target Start/End: Original strand, 6259980 - 6260102
Alignment:
Q  2 agagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccacttaa 101  Q
    |||||||||| ||||  ||| ||||||||||||| || |  |||||||||| ||||||| ||||||||| |||||||| ||||| | ||||| ||| ||     
T  6259980 agagagaagaggagatgaaagagaaagtgtgcttctgtgaggtccatgtgaccatgtgttagatttttgcgtgggtgttaaagggtgtattgtcacctat 6260079  T
Q  102 ggatatctatgtatcataactca 124  Q
    || | | |||||||||| |||||    
T  6260080 ggttgtgtatgtatcattactca 6260102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 21370126 - 21370047
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgta 80  Q
    |||| |||||||||||| ||| ||||| |||| |||||||| ||||| |||| ||  ||||||||||||| |||||||||    
T  21370126 aagaaagaagatgagaggaaagagaaaatgtgtttgtgcggggtccacgtgaccacatgtcagatttttgagtgggtgta 21370047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 20073494 - 20073616
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||| ||| ||||||||||||||||| | ||||| ||| ||| |||  |||||||| |||| |||| ||||| | ||||| ||  ||    
T  20073494 aagagagaagaggagaggaaatagaaagtgtgcttgtgcagggtccacgtggtcacgtgcaagatttttatgtgagtgtcaaagggtgtattgtcatcta 20073593  T
Q  101 aggatatctatgtatcataactc 123  Q
    | ||| ||||| |||||| ||||    
T  20073594 atgatgtctatatatcattactc 20073616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 57 - 118
Target Start/End: Complemental strand, 16327967 - 16327906
Alignment:
Q  57 gtgtcagatttttgtgtgggtgtaaaaggatatattgccacttaaggatatctatgtatcat 118  Q
    ||||||||||||| ||||||||| || |||| ||||||||| ||||||||| ||| ||||||    
T  16327967 gtgtcagatttttatgtgggtgtcaatggatgtattgccacctaaggatatttatctatcat 16327906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 60 - 119
Target Start/End: Complemental strand, 10356698 - 10356638
Alignment:
Q  60 tcagatttttgtgtgggtgtaaaagg-atatattgccacttaaggatatctatgtatcata 119  Q
    |||||||||||||||||||| || || || ||||||||| ||||||| |||||||||||||    
T  10356698 tcagatttttgtgtgggtgtcaatgggatgtattgccacctaaggatgtctatgtatcata 10356638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 9603935 - 9603857
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgt 79  Q
    ||||||||||| || |  ||| |||||||||| ||||  || |||||| ||| |||||||||||||||||||| |||||    
T  9603935 aagagagaagacgaaatgaaagagaaagtgtgattgtatggggtccatatgaccatgtgtcagatttttgtgtaggtgt 9603857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 36875644 - 36875698
Alignment:
Q  64 atttttgtgtgggtgtaaaaggatatattgccacttaaggatatctatgtatcat 118  Q
    |||||||||||||||| ||||| | ||||||||| ||||| | ||||||||||||    
T  36875644 atttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcat 36875698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 36875590 - 36875630
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcgg 41  Q
    ||||||||||| |||| |||| |||||||||||||||||||    
T  36875590 aagagagaagaggagaaaaaagagaaagtgtgcttgtgcgg 36875630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 76; Significance: 4e-35; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 31910314 - 31910191
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||   ||||||||||||||||||||||||| ||||  | ||||| ||| ||    
T  31910314 aagagagaagatgagagaaaagagaaagtgtgcttgtgcggggtccatgtggctatgtgtcagatttttgtgtgggtgtcaaagagtgtattgtcaccta 31910215  T
Q  101 aggatatctatgtatcataactca 124  Q
    ||||| ||||||||||||||||||    
T  31910214 aggatgtctatgtatcataactca 31910191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 134
Target Start/End: Original strand, 42044345 - 42044478
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||  | |||||||||||||||||||||||| |||||| ||||||||| ||    
T  42044345 aagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtacaaggatgtattgccaccta 42044444  T
Q  101 aggatatctatgtatcataactcattttgaaatg 134  Q
    ||| | |||||||||||| |||| |||| |||||    
T  42044445 agggtgtctatgtatcattactcttttttaaatg 42044478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 160 - 274
Target Start/End: Original strand, 26125983 - 26126096
Alignment:
Q  160 gggaactctaataattaatagagtagagaataagnnnnnnnnntcaattttcatgaaaaagacttgttaataaagatttagaaatactcatatccatagt 259  Q
    |||||||||||||||||||| |||||||||||||         ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||    
T  26125983 gggaactctaataattaataaagtagagaataagaaaaaaaaatcaattttcatgaaaaagactcgttaataa-gatttagaaatactcatatccatagt 26126081  T
Q  260 tcttttagcagcatg 274  Q
    |||||||||||||||    
T  26126082 tcttttagcagcatg 26126096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 50052406 - 50052533
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||| ||| ||||||||||||||||||| ||||| ||||  | ||||||||||||||||||||||| ||||| | ||||||||| ||    
T  50052406 aagagagaagaggagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 50052505  T
Q  101 aggatatctatgtatcataactcatttt 128  Q
    ||||| |||||||||||| |||| ||||    
T  50052506 aggatgtctatgtatcattactcttttt 50052533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 48183027 - 48183149
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||  | ||||||||||||||||||||||| ||||| | ||||||||| ||    
T  48183027 aagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacgta 48183126  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | |||||||||||| ||||    
T  48183127 agggtgtctatgtatcattactc 48183149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 50526149 - 50526272
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||| ||| |||||| ||||||||||||| |||| |||| || ||||||||||||||||||||||| ||||| | ||||||||| ||    
T  50526149 aagagagaagaggagaggaaatagaaagcgtgcttgtgcggaatccacgtgaccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 50526248  T
Q  101 aggatatctatgtatcataactca 124  Q
    | ||| |||||||||||| |||||    
T  50526249 aagatgtctatgtatcattactca 50526272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 89
Target Start/End: Complemental strand, 41824004 - 41823916
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatat 89  Q
    ||||||||||| ||||||||| ||||||||||||||||||| ||||||||||  | ||||||||||||||||||||||| |||||||||    
T  41824004 aagagagaagaagagagaaaagagaaagtgtgcttgtgcggggtccatgtgactacgtgtcagatttttgtgtgggtgttaaaggatat 41823916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 480425 - 480552
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| ||||||||||||||| ||| ||||| ||||  | ||||||||||||||||||||||| ||||| | ||||| ||| ||    
T  480425 aagagagaagaggagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcaccta 480524  T
Q  101 aggatatctatgtatcataactcatttt 128  Q
    ||| | |||||||||||| |||| ||||    
T  480525 agggtgtctatgtatcattactcttttt 480552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 6034166 - 6034043
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| |||||||||||||||||||  |||| ||||  |  |||||||||||||||||||||| ||||| | ||||||||| ||    
T  6034166 aagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 6034067  T
Q  101 aggatatctatgtatcataactca 124  Q
    ||| | |||||||||||| |||||    
T  6034066 agggtgtctatgtatcattactca 6034043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 11511440 - 11511563
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||||||| ||||||||||||||||||| ||||| ||||  | ||||||||||||| ||||||||| ||||| | ||||||||| ||    
T  11511440 aagagagaagagaagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccaccta 11511539  T
Q  101 aggatatctatgtatcataactca 124  Q
    ||| | |||||||||||| |||||    
T  11511540 agggtgtctatgtatcattactca 11511563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 3481776 - 3481650
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||||| ||| ||| |||||||||||||||| || ||||| ||||  ||||||||||||||||||||||||| ||||  | ||||||||| ||    
T  3481776 aagagagaagatgggaggaaagagaaagtgtgcttgtgtggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaaagagtgtattgccaccta 3481677  T
Q  101 aggatatctatgtatcataactcattt 127  Q
    | | | |||||||||||| ||||||||    
T  3481676 aaggtgtctatgtatcattactcattt 3481650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 40574901 - 40574776
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcat-gtgtcagatttttgtgtgggtgtaaaaggatatattgccactt 99  Q
    ||||||||||| ||||||||| ||||||||||||||| |||  ||||||| | ||  ||||||||||||||||||||||| ||||| | |||| |||| |    
T  40574901 aagagagaagaggagagaaaagagaaagtgtgcttgttcgggatccatgt-agcagcgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacct 40574803  T
Q  100 aaggatatctatgtatcataactcatt 126  Q
    |||||| ||||||||||||||||||||    
T  40574802 aaggatgtctatgtatcataactcatt 40574776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 41236469 - 41236347
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||  | ||||||||||||||||||| ||| ||| | | ||||||||| ||    
T  41236469 aagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgccaccta 41236370  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | |||||||||||| ||||    
T  41236369 agggtgtctatgtatcattactc 41236347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 54473511 - 54473634
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| | ||||||||||||||||| ||||| ||||  | |||| |||||||||||||||||| ||| | | ||||| ||| ||    
T  54473511 aagagagaagaggagagaaaagataaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaatggtgtattgtcaccta 54473610  T
Q  101 aggatatctatgtatcataactca 124  Q
    ||| | |||||||||||| |||||    
T  54473611 agggtgtctatgtatcattactca 54473634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 29234223 - 29234345
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||  | ||||||||||||||||  ||| | ||||| | ||||||||  ||    
T  29234223 aagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgaaggtatcaaagggtgtattgccatcta 29234322  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | |||||||||||| ||||    
T  29234323 agggtgtctatgtatcattactc 29234345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 29240008 - 29239886
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||| ||| |||||||||||||||| || ||||| ||||  | |||| |||||||||||||| ||| ||| | | ||||||||| ||    
T  29240008 aagagagaagaggagaggaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtggatgtcaaatggtgtattgccaccta 29239909  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | |||||||||||| ||||    
T  29239908 agggtgtctatgtatcattactc 29239886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 96
Target Start/End: Original strand, 24995085 - 24995180
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgcca 96  Q
    ||||||||||| ||||||||| ||||| ||||||||||||| ||||| ||||  | |||||| |||||| ||||||||| ||||| | ||||||||    
T  24995085 aagagagaagaggagagaaaagagaaaatgtgcttgtgcggggtccacgtgactacgtgtcaaatttttatgtgggtgtcaaagggtgtattgcca 24995180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 23608357 - 23608279
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgt 79  Q
    ||||||||||| |||| |||| |||||||||||||||| ||||| || ||||  | |||||||||||||||||||||||    
T  23608357 aagagagaagaggagataaaagagaaagtgtgcttgtgtggagttcacgtgactacgtgtcagatttttgtgtgggtgt 23608279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 48647704 - 48647782
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgt 79  Q
    ||||||||||| ||||| ||| ||||| ||||||||||||||||||| |||| || |||| |||||||| |||||||||    
T  48647704 aagagagaagaggagaggaaagagaaattgtgcttgtgcggagtccacgtgaccacgtgttagatttttatgtgggtgt 48647782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 119
Target Start/End: Original strand, 53352544 - 53352661
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| ||||||| ||||||||||| |||||  | |  | ||||||||||||||||| ||||| |||| || ||||| ||| ||    
T  53352544 aagagagaagaggagagaaaagagaaagtatgcttgtgcggggtccacttaactacgtgtcagatttttgtgtaggtgttaaagaatgtattg-caccta 53352642  T
Q  101 aggatatctatgtatcata 119  Q
    ||| | |||||||||||||    
T  53352643 agggtgtctatgtatcata 53352661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 55475313 - 55475191
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||  ||| ||||||||| ||| ||| | |||||| ||  ||  |||||||||||||||||||||| ||||| | ||||||||| ||    
T  55475313 aagagagaagagaagaagaaagagaaagtgtacttatgcagggtccatatggccacatgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 55475214  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||||| | |||||||||||||||    
T  55475213 aggatgtttatgtatcataactc 55475191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 29547994 - 29548059
Alignment:
Q  58 tgtcagatttttgtgtgggtgtaaaaggatatattgccacttaaggatatctatgtatcataactc 123  Q
    |||||||||||||||||||||| || |||| ||||||||| ||||||| | |||||||||||||||    
T  29547994 tgtcagatttttgtgtgggtgtcaagggatgtattgccacctaaggatgtttatgtatcataactc 29548059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 47986308 - 47986208
Alignment:
Q  23 agaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccacttaaggatatctatgtatcataact 122  Q
    ||||||||| ||||||||| |||||| ||  ||  |||||||||||||||||| ||| || |||| ||||||||| ||||| | | ||||||||||||||    
T  47986308 agaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtggatgtcaagggatgtattgccacctaagggtgtttatgtatcataact 47986209  T
Q  123 c 123  Q
    |    
T  47986208 c 47986208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 8343141 - 8343263
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||  ||| ||||||| | ||| ||||| |||||| ||  ||  |||||||||||| ||| ||||| ||||||| ||||||||| ||    
T  8343141 aagagagaagagaagaagaaagagaaagtatacttatgcggggtccatatggccacatgtcagatttttatgtaggtgtcaaaggatgtattgccaccta 8343240  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||||| | |||||||||||||||    
T  8343241 aggatgtttatgtatcataactc 8343263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 19670694 - 19670816
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||  ||| ||||||||| ||||||||| |||||| ||  ||  ||||||||||||||||| |||| || || | ||||||||| ||    
T  19670694 aagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgagtgtcaaggggtgtattgccaccta 19670793  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | | |||||||||||||||    
T  19670794 agggtgtttatgtatcataactc 19670816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 29977985 - 29977885
Alignment:
Q  23 agaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccacttaaggatatctatgtatcataact 122  Q
    |||||||||||||||| || |||||| |||  | ||||||||||||||||||||||| || || | ||||||||| || || | | |||||||||| |||    
T  29977985 agaaagtgtgcttgtgtggggtccatatgactacgtgtcagatttttgtgtgggtgttaaggggtgtattgccacctatggttctgtatgtatcattact 29977886  T
Q  123 c 123  Q
    |    
T  29977885 c 29977885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 17983721 - 17983823
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||  ||| ||||||||| ||||||||| |||||| ||  ||  |||||||||||||||||||||| || || | ||||||||| ||    
T  17983721 aagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccaccta 17983820  T
Q  101 agg 103  Q
    |||    
T  17983821 agg 17983823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 50813870 - 50813992
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||  ||| ||||||||| ||||||||| || ||| ||| ||  |||||||||||||||||||||| || || | |||| |||| ||    
T  50813870 aagagagaagagaagaagaaagagaaagtgtacttgtgcggggttcatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattaccaccta 50813969  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||  | | |||||||||||||||    
T  50813970 agagtgtttatgtatcataactc 50813992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 18924473 - 18924597
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||  ||| ||||||||| |||||||||||| ||| |   ||  |||||||||||||||||| | | || || | ||||||||| ||    
T  18924473 aagagagaagagaagaagaaagagaaagtgtacttgtgcggagttcatattgccacatgtcagatttttgtgtggatatcaaggggtgtattgccaccta 18924572  T
Q  101 aggatatctatgtatcataactcat 125  Q
    ||| ||| |||| ||||||||||||    
T  18924573 agggtatttatggatcataactcat 18924597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 32767058 - 32766958
Alignment:
Q  23 agaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccacttaaggatatctatgtatcataact 122  Q
    ||||||||| ||||||| | |||||| ||  ||  |||||||||||||| ||||||| || || | ||||||||| ||||  | | ||||||||||||||    
T  32767058 agaaagtgtacttgtgcagggtccatatggccacatgtcagatttttgtatgggtgtcaaggggtgtattgccacctaagagtgtttatgtatcataact 32766959  T
Q  123 c 123  Q
    |    
T  32766958 c 32766958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 76; Significance: 4e-35; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 6 - 125
Target Start/End: Original strand, 26141515 - 26141634
Alignment:
Q  6 agaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccacttaaggat 105  Q
    |||||| ||||||||| |||||||||||||||| || |||||||||| || ||||||||||||||||||||||| ||||| | ||||||||| |||||||    
T  26141515 agaagaggagagaaaagagaaagtgtgcttgtgtggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaaagggtgtattgccacctaaggat 26141614  T
Q  106 atctatgtatcataactcat 125  Q
     |||||||||||||||||||    
T  26141615 gtctatgtatcataactcat 26141634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 53982133 - 53982009
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||  | ||||||||||||||||||||||| ||||| | ||||||||| ||    
T  53982133 aagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 53982034  T
Q  101 aggatatctatgtatcataactcat 125  Q
    ||| | |||||||||||| ||||||    
T  53982033 agggtgtctatgtatcattactcat 53982009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 20764893 - 20765016
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||||||||||||| ||||||||||||||| ||| |||||||||  || ||||||||||||||||||||||| ||||  | |||| |||| ||    
T  20764893 aagagagaagatgagagaaaagagaaagtgtgcttgtacggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagagtgtattaccaccta 20764992  T
Q  101 aggatatctatgtatcataactca 124  Q
    ||||| ||||||| ||||||||||    
T  20764993 aggatgtctatgtctcataactca 20765016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 11347900 - 11348022
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| ||||||||||||| ||| | |||||||||  || ||||||||||||||||||| ||| ||||||| ||||| ||| ||    
T  11347900 aagagagaagaggagagaaaagagaaagtgtgcttatgcagggtccatgtggccacgtgtcagatttttgtgtggatgtcaaaggatgtattgtcaccta 11347999  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||||| |||||||||||||||||    
T  11348000 aggatgtctatgtatcataactc 11348022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 51419338 - 51419460
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||| | ||||||||| ||||||||||||||||||| ||| |||||  || ||||||||||||||||||||||| ||||||| ||||| ||  ||    
T  51419338 aagagagaataggagagaaaagagaaagtgtgcttgtgcggggtctatgtggccacgtgtcagatttttgtgtgggtgttaaaggatgtattgtcatcta 51419437  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||||| |||||||||||||||||    
T  51419438 aggatgtctatgtatcataactc 51419460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 119
Target Start/End: Complemental strand, 52629422 - 52629304
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||||||||||||| ||||||||||||||| ||| ||||| ||||  | ||||||||||||||||||||||| ||||| | ||||||||| ||    
T  52629422 aagagagaagatgagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 52629323  T
Q  101 aggatatctatgtatcata 119  Q
    ||| | |||||||||||||    
T  52629322 agggtgtctatgtatcata 52629304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 33644322 - 33644199
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||  | ||||||||||||||||||||||| ||||| | |||||||||  |    
T  33644322 aagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccca 33644223  T
Q  101 aggatatctatgtatcataactca 124  Q
    ||| | |||||||||||| |||||    
T  33644222 agggtgtctatgtatcattactca 33644199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 41189742 - 41189864
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||| |||||| ||||||||| ||||||||||||||||||| |||||||||  || |||||| |||||| ||||||||| ||| ||| ||||||||| ||    
T  41189742 aagaaagaagaggagagaaaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcaaatttttatgtgggtgtcaaatgatgtattgccaccta 41189841  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||||| | |||||||||||||||    
T  41189842 aggatgtatatgtatcataactc 41189864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 17470527 - 17470405
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||||||||||||| |||||||||||||||| || ||||| ||||  | ||||||||||||||||||||||| ||| | | ||||||||| ||    
T  17470527 aagagagaagatgagagaaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccaccta 17470428  T
Q  101 aggatatctatgtatcataactc 123  Q
    | | | |||||||||||| ||||    
T  17470427 aaggtgtctatgtatcattactc 17470405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 54868873 - 54868995
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||||||||||||| |||||||||| |||||||| ||||| || |  | ||||||||||||||||||||||| ||| | | ||||||||| ||    
T  54868873 aagagagaagatgagagaaaagagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccaccta 54868972  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | |||||||||||| ||||    
T  54868973 agggtgtctatgtatcattactc 54868995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 49607536 - 49607414
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||| |||| ||||||||| |||||||||||||||| ||  |||| ||||  | ||||||||||||||||||||||| ||||| | ||||||||| ||    
T  49607536 aagagaaaagaggagagaaaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 49607437  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | |||||||||||| ||||    
T  49607436 agggtgtctatgtatcattactc 49607414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 120
Target Start/End: Complemental strand, 26754817 - 26754698
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||| ||| ||||| ||||||||||||| |||||||||| ||  |||||||||||||||||| |||  |||| | ||||||||| ||    
T  26754817 aagagagaagaggagaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtccaagggtgtattgccaccta 26754718  T
Q  101 aggatatctatgtatcataa 120  Q
    ||| | |||||| |||||||    
T  26754717 agggtgtctatgaatcataa 26754698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 8076515 - 8076393
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||| ||| ||||||||||||||||||| ||||| ||||  | |||| |||||||||||||||||| ||||| | || |||||| ||    
T  8076515 aagagagaagaggagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccaccta 8076416  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | | |||||||||| ||||    
T  8076415 agggtgtttatgtatcattactc 8076393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 47531987 - 47531865
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||| | ||||||||| ||||||||||||||||||| || ||| ||  || |||||||||| |||||||| ||| ||| | | ||||||||  ||    
T  47531987 aagagagaataggagagaaaagagaaagtgtgcttgtgcggggttcatatggccacgtgtcagattcttgtgtggatgttaaaaggtgtattgccatcta 47531888  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||||| |||||||||||||||||    
T  47531887 aggatgtctatgtatcataactc 47531865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 31456811 - 31456694
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||| |||| ||||||||| ||||||||||||||||||| |||||  |||  | ||||||||||||||||||||||| ||||| | ||||||| | ||    
T  31456811 aagagaaaagaggagagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccgccta 31456712  T
Q  101 aggatatctatgtatcat 118  Q
     || | ||||||||||||    
T  31456711 tgggtgtctatgtatcat 31456694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 13 - 118
Target Start/End: Original strand, 48587081 - 48587186
Alignment:
Q  13 gagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccacttaaggatatctatg 112  Q
    ||||||||| ||||||||| |||||||||  |||| ||||  | ||||||||||||| ||| ||||| ||||| | ||||||||| ||||| ||||||||    
T  48587081 gagagaaaagagaaagtgtacttgtgcgggatccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccacctaagggtatctatg 48587180  T
Q  113 tatcat 118  Q
    ||||||    
T  48587181 tatcat 48587186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 6 - 123
Target Start/End: Complemental strand, 11907488 - 11907371
Alignment:
Q  6 agaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccacttaaggat 105  Q
    |||||| ||||||||| ||||| ||||||||||||| |||||| ||| ||  ||||||||||||||||| ||||  | |  | ||||| ||| ||||| |    
T  11907488 agaagaggagagaaaagagaaaatgtgcttgtgcggggtccatatgaccacatgtcagatttttgtgtgagtgttcaggtgtgtattgtcacctaagggt 11907389  T
Q  106 atctatgtatcataactc 123  Q
     |||||||||||||||||    
T  11907388 gtctatgtatcataactc 11907371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 14 - 123
Target Start/End: Original strand, 27714882 - 27714991
Alignment:
Q  14 agagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccacttaaggatatctatgt 113  Q
    ||||| || ||||||||||||||||||| |||||  |||  | ||||||||||||||||||||||| ||||| | |||| |||| ||| | | |||||||    
T  27714882 agagagaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccacctaaaggtgtctatgt 27714981  T
Q  114 atcataactc 123  Q
    ||||| ||||    
T  27714982 atcattactc 27714991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 39670133 - 39670009
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| || |||||||| ||| ||  |||||  |||||| |||||| |||||| | | | ||| || |||||||||||||| ||    
T  39670133 aagagagaagaggagagaaaagaggaagtgtgcgtgtacgaggtccacatgatcacgtgtcaaatttttatatagatgtcaagggatatattgccacata 39670034  T
Q  101 aggatatctatgtatcataactcatt 126  Q
    ||||| ||||||||| ||||||||||    
T  39670033 aggatgtctatgtat-ataactcatt 39670009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 57 - 123
Target Start/End: Complemental strand, 8956828 - 8956762
Alignment:
Q  57 gtgtcagatttttgtgtgggtgtaaaaggatatattgccacttaaggatatctatgtatcataactc 123  Q
    |||||| |||||| ||||||||| ||||||| ||||||||| ||||||| |||||||||||| ||||    
T  8956828 gtgtcacatttttatgtgggtgtcaaaggatgtattgccacataaggatgtctatgtatcattactc 8956762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 57 - 123
Target Start/End: Original strand, 11095387 - 11095453
Alignment:
Q  57 gtgtcagatttttgtgtgggtgtaaaaggatatattgccacttaaggatatctatgtatcataactc 123  Q
    ||||||||||||||||||||||| ||||| | ||||||||| ||||| | |||||||||||| ||||    
T  11095387 gtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaagggtgtctatgtatcattactc 11095453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 14623817 - 14623939
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||  ||| |||||||||||||||| |  |||||  ||| ||  |||||||||||| ||||||||| || || | ||||||||| ||    
T  14623817 aagagagaagagaagatgaaagagaaagtgtgcttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaaggggtgtattgccaccta 14623916  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||||| |||||||||||| ||||    
T  14623917 aggatgtctatgtatcattactc 14623939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 24699932 - 24700054
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||| ||| |||||||||| |||| | | ||||| |||  || ||| ||||||||| ||||||||| ||| | | ||||||||  ||    
T  24699932 aagagagaagaggagaggaaagagaaagtgtgtttgtacagggtccacgtggccacgtgccagatttttatgtgggtgtcaaaaggtgtattgccaacta 24700031  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||||| |||||||||||| ||||    
T  24700032 aggatgtctatgtatcattactc 24700054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 30801711 - 30801828
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||||||||| ||| ||||| |||||||||| || |||||| |||  |  ||||| |||||||||||||| | ||||| | ||||  ||| ||    
T  30801711 aagagagaagatgagaggaaagagaaaatgtgcttgtgtggggtccatatgactacatgtcatatttttgtgtgggtatcaaagggtgtattatcaccta 30801810  T
Q  101 aggatatctatgtatcat 118  Q
    ||| | ||||||||||||    
T  30801811 agggtgtctatgtatcat 30801828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 36707406 - 36707524
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| |||||||||||    ||||  |||| || |  | ||||||||||||||||||| ||| ||||| | ||||| ||| ||    
T  36707406 aagagagaagaggagagaaaagagaaagtgtgc----gcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaagggtgtattgtcaccta 36707501  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| |||||||||||||| ||||    
T  36707502 agggtatctatgtatcattactc 36707524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 45058531 - 45058653
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||  ||| ||||||| | ||||||||| |||||| || |||  |||||||||||| |||||||||  |||| | ||||||||| ||    
T  45058531 aagagagaagagaagaagaaagagaaagtatacttgtgcggggtccatatggtcacatgtcagatttttatgtgggtgt-caagggtgtattgccaccta 45058629  T
Q  101 aggatatctatgtatcataactca 124  Q
    ||| | | ||||||||||||||||    
T  45058630 agggtgtttatgtatcataactca 45058653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 1758434 - 1758512
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgt 79  Q
    ||||||||||| ||||  ||| ||||| |||| ||||| |||||||| || | ||| ||||||||||||||||||||||    
T  1758434 aagagagaagaggagatgaaagagaaaatgtgtttgtgtggagtccacgtaaccatatgtcagatttttgtgtgggtgt 1758512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 123
Target Start/End: Original strand, 33118885 - 33118951
Alignment:
Q  57 gtgtcagatttttgtgtgggtgtaaaaggatatattgccacttaaggatatctatgtatcataactc 123  Q
    |||||| |||||||||||||||| ||||| | ||||| ||| ||||| | |||||||||||||||||    
T  33118885 gtgtcaaatttttgtgtgggtgtcaaagggtgtattgtcacctaagggtgtctatgtatcataactc 33118951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 57 - 123
Target Start/End: Original strand, 35965808 - 35965874
Alignment:
Q  57 gtgtcagatttttgtgtgggtgtaaaaggatatattgccacttaaggatatctatgtatcataactc 123  Q
    ||||||||||||| ||||||||| ||||||| ||||  ||||||||||| | |||||||||| ||||    
T  35965808 gtgtcagatttttatgtgggtgtcaaaggatgtattatcacttaaggatgtatatgtatcattactc 35965874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 71
Target Start/End: Original strand, 48375684 - 48375754
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgt 71  Q
    ||||||||||| ||||| ||| ||||| ||||||||||||| |||||||||| ||   |||||||||||||    
T  48375684 aagagagaagaggagaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacacgtcagatttttgt 48375754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 25407126 - 25407243
Alignment:
Q  2 agagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcaga-tttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||| ||||  ||| |||||||||| ||||| ||  ||||| |||||| |||||||| |||||||||| |||| || || ||||||||||| ||    
T  25407126 agagagaagaggagatgaaagagaaagtgtgtttgtgtgggatccatatgatcacgtgtcagattttttgtgtgtgtgtcaaggggtatattgccaccta 25407225  T
Q  101 aggatatctatgtatcat 118  Q
     || | | ||||||||||    
T  25407226 tggttgtgtatgtatcat 25407243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 118
Target Start/End: Original strand, 13898034 - 13898150
Alignment:
Q  2 agagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccacttaa 101  Q
    ||||||||||  |||  ||| |||||||||||||||| |  |||||  ||| || ||||||||||||| ||||||||| || || | ||||||||| |||    
T  13898034 agagagaagagaagatgaaagagaaagtgtgcttgtgtgaggtccacatgaacacgtgtcagatttttatgtgggtgtcaaggggtgtattgccacctaa 13898133  T
Q  102 ggatatctatgtatcat 118  Q
    |||| | ||| ||||||    
T  13898134 ggatgtttatctatcat 13898150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 123
Target Start/End: Complemental strand, 35536692 - 35536626
Alignment:
Q  57 gtgtcagatttttgtgtgggtgtaaaaggatatattgccacttaaggatatctatgtatcataactc 123  Q
    |||||| |||||| ||||||||| ||| | | ||||||||| ||||||| |||||||||||| ||||    
T  35536692 gtgtcacatttttatgtgggtgtcaaatggtgtattgccacataaggatgtctatgtatcattactc 35536626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 36331307 - 36331385
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgt 79  Q
    |||||||||||  |||  ||| ||||||||| ||||||||| |||||| ||  ||  ||||||||||||||||||||||    
T  36331307 aagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgt 36331385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 119
Target Start/End: Original strand, 25395368 - 25395429
Alignment:
Q  58 tgtcagatttttgtgtgggtgtaaaaggatatattgccacttaaggatatctatgtatcata 119  Q
    |||||||||||||||||||| | || |||| ||| ||||| ||||||| | |||||||||||    
T  25395368 tgtcagatttttgtgtgggtattaagggatgtatggccacataaggatgtttatgtatcata 25395429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 2e-33; HSPs: 35)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 19329964 - 19329840
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||| | ||||||||||||||||||||||| ||| | | ||||||||| ||    
T  19329964 aagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccaccta 19329865  T
Q  101 aggatatctatgtatcataactcat 125  Q
    ||||| |||||||||||| ||||||    
T  19329864 aggatgtctatgtatcattactcat 19329840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 122
Target Start/End: Complemental strand, 35522998 - 35522877
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| |||||||||||||||||||  ||||| ||  || ||||||||||||||||||||||| ||| | | ||||||||||||    
T  35522998 aagagagaagaagagagaaaagagaaagtgtgcttgtgcgggatccatatggccacgtgtcagatttttgtgtgggtgttaaatggtgtattgccactta 35522899  T
Q  101 aggatatctatgtatcataact 122  Q
    ||||| ||||||||||||||||    
T  35522898 aggatgtctatgtatcataact 35522877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 4 - 123
Target Start/End: Original strand, 46033782 - 46033901
Alignment:
Q  4 agagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccacttaagg 103  Q
    |||||||| ||||||||| ||||| | |||||||||||||| ||||||| || ||||||||||||| ||||||||| ||||| | ||||||||| ||||     
T  46033782 agagaagaggagagaaaagagaaaatatgcttgtgcggagttcatgtgaccacgtgtcagatttttatgtgggtgttaaagggtgtattgccacctaaga 46033881  T
Q  104 atatctatgtatcataactc 123  Q
    ||||||||||||||||||||    
T  46033882 atatctatgtatcataactc 46033901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 38267162 - 38267039
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||  | ||||||||||||||||||||||| ||||| | ||||| ||| ||    
T  38267162 aagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcacata 38267063  T
Q  101 aggatatctatgtatcataactca 124  Q
    ||| | |||||||||||| |||||    
T  38267062 agggtgtctatgtatcattactca 38267039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 38837339 - 38837209
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||  | ||||||||||||||||| |||||| |||| | ||||||||| ||    
T  38837339 aagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtaggtgtacaagggtgtattgccaccta 38837240  T
Q  101 aggatatctatgtatcataactcattttgaaa 132  Q
    ||| | |||||||||||| |||| ||||||||    
T  38837239 agggtgtctatgtatcattactc-ttttgaaa 38837209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 3784117 - 3784000
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| |||||||||||||||||||  |||| ||||  | ||||||||||||||||||||||| ||| ||| ||||||||| ||    
T  3784117 aagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaagatgtattgccaccta 3784018  T
Q  101 aggatatctatgtatcat 118  Q
    ||| | ||||||||||||    
T  3784017 agggtgtctatgtatcat 3784000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 35137655 - 35137528
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| |||||||||| |||||||| ||||| ||||  | |||| |||||||||||||||||| ||||| | ||||||||| ||    
T  35137655 aagagagaagaggagagaaaagagaaagtgtgtttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccaccta 35137556  T
Q  101 aggatatctatgtatcataactcatttt 128  Q
    ||| | ||||| |||||| |||||||||    
T  35137555 agggtgtctatttatcattactcatttt 35137528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 8080361 - 8080483
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||  | ||||||||||||| ||| ||||| ||||| | ||||||||| ||    
T  8080361 aagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtaggtgtcaaagggtgtattgccaccta 8080460  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | |||||||||||| ||||    
T  8080461 agggtgtctatgtatcattactc 8080483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 14 - 123
Target Start/End: Original strand, 36361904 - 36362013
Alignment:
Q  14 agagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccacttaaggatatctatgt 113  Q
    |||||||| |||||||||||||||| || ||||| ||||  | ||||||||||||||||||||||| ||||||| ||||||||| ||||| | |||||||    
T  36361904 agagaaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgccacctaagggtgtctatgt 36362003  T
Q  114 atcataactc 123  Q
    ||||| ||||    
T  36362004 atcattactc 36362013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 123
Target Start/End: Complemental strand, 3434672 - 3434562
Alignment:
Q  13 gagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccacttaaggatatctatg 112  Q
    ||||||||| |||||||||||||||||||  |||| ||||  | ||||||| ||||||||||||||| ||||| | ||||||||| ||||||| ||||||    
T  3434672 gagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagttttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatg 3434573  T
Q  113 tatcataactc 123  Q
    |||||| ||||    
T  3434572 tatcattactc 3434562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 123
Target Start/End: Complemental strand, 7389499 - 7389389
Alignment:
Q  13 gagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccacttaaggatatctatg 112  Q
    ||||||||| ||||||||||||||||||| ||||| ||||  | ||||||||||||||||||||||| ||||  | ||||||||| ||||| | ||||||    
T  7389499 gagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagagtgtattgccacctaagggtgtctatg 7389400  T
Q  113 tatcataactc 123  Q
    |||||| ||||    
T  7389399 tatcattactc 7389389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 26296766 - 26296644
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| ||||| || |||||||||| |||||| ||  || || |||||||||| ||||| ||| ||||| ||||||| ||| ||    
T  26296766 aagagagaagaggagagaaaagagaaaatgcgcttgtgcggggtccatatggccacgtatcagatttttatgtggatgttaaagggtatattgtcaccta 26296667  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||||| |||||||||||||||||    
T  26296666 aggatgtctatgtatcataactc 26296644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 29 - 123
Target Start/End: Original strand, 46374808 - 46374902
Alignment:
Q  29 tgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccacttaaggatatctatgtatcataactc 123  Q
    ||||||||||||| |||||||||  || ||||||||||||||||||||||| ||||| | | ||||||| ||||||| |||||||||||||||||    
T  46374808 tgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgttaaagggtgtgttgccacctaaggatgtctatgtatcataactc 46374902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 14 - 123
Target Start/End: Complemental strand, 36362135 - 36362026
Alignment:
Q  14 agagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccacttaaggatatctatgt 113  Q
    |||||||| |||||||||||||||| || ||||| ||||  | ||||||||||||||||||||||| ||||||| |||| |||| ||||| | |||||||    
T  36362135 agagaaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattaccacctaagggtgtctatgt 36362036  T
Q  114 atcataactc 123  Q
    ||||| ||||    
T  36362035 atcattactc 36362026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 40957829 - 40957707
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||||||||||||| ||||||||||||||| |||  |||| ||||  | ||||||||||||||||||||| | ||||  | ||||||||| ||    
T  40957829 aagagagaagatgagagaaaagagaaagtgtgcttgtacgggatccacgtgactacgtgtcagatttttgtgtgggtatcaaagagtgtattgccaccta 40957730  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||  | |||||||||||| ||||    
T  40957729 agagtgtctatgtatcattactc 40957707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 32951471 - 32951588
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||  | |||| |||||||||||||| ||| ||||||| ||||| ||  ||    
T  32951471 aagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtggatgttaaaggatgtattgtcatcta 32951570  T
Q  101 aggatatctatgtatcat 118  Q
    ||  | ||||||||||||    
T  32951571 agagtgtctatgtatcat 32951588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 31735999 - 31735881
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| |||||||||||||||||||  ||||||||  || ||||       |||||||||||| ||||  | ||||||||| ||    
T  31735999 aagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccatgtggccacgtgt-------ttgtgtgggtgttaaagagtgtattgccaccta 31735907  T
Q  101 aggatatctatgtatcataactcatt 126  Q
    ||||| ||||||||||||||||||||    
T  31735906 aggatgtctatgtatcataactcatt 31735881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 4999492 - 4999614
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| |||| |||| |||||||||| |||||||| ||||| ||||  | || |||||||||||||||||||| ||| | | ||||||||  ||    
T  4999492 aagagagaagaggagataaaagagaaagtgtgtttgtgcggggtccacgtgactacgtatcagatttttgtgtgggtgtcaaaaggtgtattgccatcta 4999591  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | |||||||||||| ||||    
T  4999592 agggtgtctatgtatcattactc 4999614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 19436165 - 19436287
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||| ||||  |||||||| ||||||||||||| |||||  |||| ||||  | ||||||||||||||||||||||| ||| | | ||||| ||| ||    
T  19436165 aagagaaaagagaagagaaaagagaaagtgtgcttatgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcaccta 19436264  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||||| |||||||||||| ||||    
T  19436265 aggatgtctatgtatcattactc 19436287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 22343483 - 22343361
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||  ||| ||||||||| ||||||||| |||||| || |||  |||||||||||||||||||||| || || | ||||||||| ||    
T  22343483 aagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtgtattgccaccta 22343384  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | | |||||||||||||||    
T  22343383 agggtgtttatgtatcataactc 22343361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 36208295 - 36208173
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||| ||| ||||| ||||||||||| | ||||| |||| ||  |||||| ||||||||||||||| || | || |||| |||| ||    
T  36208295 aagagagaagaggagaggaaagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagctttttgtgtgggtgtcaatgaatgtattaccaccta 36208196  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | |||||||||||||||||    
T  36208195 agggtgtctatgtatcataactc 36208173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 8238335 - 8238207
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||  ||| ||||||||| ||||||||| |||||| |||  |  |||||||||||||||||||||| ||||| | ||||||||| ||    
T  8238335 aagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatgactacatgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 8238236  T
Q  101 -aggatatctatgtatcataactcatttt 128  Q
     ||| | | ||||||||||||||||||||    
T  8238235 cagggtgtttatgtatcataactcatttt 8238207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 3694489 - 3694362
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| |||||||||||||||||||  ||||  |||  | ||||||||||||||||||||||| ||| | | ||||| ||| ||    
T  3694489 aagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacatgactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgtcaccta 3694390  T
Q  101 aggatatctatgtatcataactcatttt 128  Q
    ||| | | ||| |||||| | |||||||    
T  3694389 agggtgtgtatatatcattattcatttt 3694362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 21234501 - 21234398
Alignment:
Q  23 agaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccacttaaggatatctatgtatcataact 122  Q
    ||||| ||||||||||||| || ||||||   | |||||| ||||||||||| |||| ||||| | ||||| ||| ||||||| ||||||||||||||||    
T  21234501 agaaaatgtgcttgtgcggggtacatgtggctacgtgtcaaatttttgtgtgagtgtcaaagggtgtattgtcacctaaggatgtctatgtatcataact 21234402  T
Q  123 catt 126  Q
    ||||    
T  21234401 catt 21234398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 39255902 - 39256024
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||  ||| ||||||||| |||||| |||||||| |||  || ||||||||||||||| ||||| | ||  | | ||||||||| ||    
T  39255902 aagagagaagaggagatgaaagagaaagtgttcttgtgtggagtccacgtgc-cacgtgtcagatttttgtatgggtatcaagtggtgtattgccaccta 39256000  T
Q  101 aggatatctatgtatcataactca 124  Q
    ||| | ||||||||||||||||||    
T  39256001 aggttgtctatgtatcataactca 39256024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 10343541 - 10343619
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgt 79  Q
    ||||||||||| ||||| ||| ||||||||||| | ||| ||||||| |  | ||||||||||||||||||||||||||    
T  10343541 aagagagaagaggagaggaaagagaaagtgtgcgtctgcagagtccacggaaacatgtgtcagatttttgtgtgggtgt 10343619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 41915863 - 41915741
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||  ||| ||||||||| ||||||||| |||||| ||  ||  |||||||||||||||| ||||| || || | ||||||||| ||    
T  41915863 aagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtaggtgtcaaggggtgtattgccaccta 41915764  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | | |||||||||||||||    
T  41915763 agggtgtttatgtatcataactc 41915741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 32564404 - 32564527
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||  ||| |||||||||  |||||||| |||||| |   ||  |||||||||||||||||||||| || || | ||||||||| ||    
T  32564404 aagagagaagagaagaagaaagagaaagtgtatttgtgcggggtccatatagccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccaccta 32564503  T
Q  101 aggatatctatgtatcataactca 124  Q
    || || | ||||||||||||||||    
T  32564504 agaatgtttatgtatcataactca 32564527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 35468833 - 35468960
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| || || ||| |||||||||| |||||| | |||||  || |||  | | |||||||| ||||||||| ||| ||| ||||||||  ||    
T  35468833 aagagagaagaggataggaaagagaaagtgtgtttgtgcagggtccacatggtcacatattagatttttatgtgggtgtcaaatgatgtattgccatcta 35468932  T
Q  101 aggatatctatgtatcataactcatttt 128  Q
    ||||| |||||||||||| |||| ||||    
T  35468933 aggatgtctatgtatcattactcttttt 35468960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 18207301 - 18207180
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||  ||| |||||||||||||||| || || || |||  || |||| |||||||||| ||||||| ||  | | ||||||||| ||    
T  18207301 aagagagaagaggagatgaaagagaaagtgtgcttgtgtggggttcacgtgc-cacgtgttagatttttgtatgggtgtcaagaggtgtattgccaccta 18207203  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | |||||||||||||||||    
T  18207202 aggttgtctatgtatcataactc 18207180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 32045959 - 32045842
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||||||||  ||||||||||| |||| ||  || ||| || || | | ||||||||||||| |||||||||  |   |||||||||||| ||    
T  32045959 aagagagaagatgagatgaaaaagaaagtatgctagtatggggtctatatggttacgtgtcagatttttatgtgggtgtccagtaatatattgccaccta 32045860  T
Q  101 aggatatctatgtatcat 118  Q
    || |||| ||||||||||    
T  32045859 agaatatatatgtatcat 32045842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 23 - 123
Target Start/End: Complemental strand, 38044297 - 38044197
Alignment:
Q  23 agaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccacttaaggatatctatgtatcataact 122  Q
    ||||||||| ||||||||| |||||| ||   |  |||||||||||||||||| ||| || || | ||||||||| ||||| | | ||||||||||||||    
T  38044297 agaaagtgtacttgtgcggggtccatatggctacatgtcagatttttgtgtggatgtcaaggggtgtattgccacctaagggtgtttatgtatcataact 38044198  T
Q  123 c 123  Q
    |    
T  38044197 c 38044197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 11044300 - 11044249
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtga 52  Q
    ||||||||||||||||| ||| ||||||||| ||||||||| ||||| ||||    
T  11044300 aagagagaagatgagaggaaagagaaagtgtacttgtgcggggtccacgtga 11044249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 40846091 - 40846213
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||  ||| |||||||||  |||||||| |||||| | |  |  ||| |||||||||||||| ||| || || | ||||||||| ||    
T  40846091 aagagagaagagaagaagaaagagaaagtgtatttgtgcggggtccatataactacatgttagatttttgtgtggatgtcaaggggtgtattgccaccta 40846190  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||||| | |||||||||||||||    
T  40846191 aggatgtttatgtatcataactc 40846213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 129
Target Start/End: Complemental strand, 7728028 - 7727900
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||  ||| ||||||||| ||||||||| |||||| ||| ||  |||||||||||| ||||  ||| ||  | | |||| |||| ||    
T  7728028 aagagagaagagaagaagaaacagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttatgtgaatgtcaagaggtgtattaccaccta 7727929  T
Q  101 aggatatctatgtatcataactcattttg 129  Q
    ||| | | ||||||||||||||| |||||    
T  7727928 agggtgtttatgtatcataactctttttg 7727900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 2e-33; HSPs: 34)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 28381633 - 28381757
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||  | |||||||||||||||||||||||  || | | ||||||||| ||    
T  28381633 aagagagaagatgagagaaaagagaaagtgtgcttgtgcggagtccatgtgactacgtgtcagatttttgtgtgggtgtcgaaaggtgtattgccaccta 28381732  T
Q  101 aggatatctatgtatcataactcat 125  Q
    ||| | |||||||||||| ||||||    
T  28381733 agggtgtctatgtatcattactcat 28381757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 125
Target Start/End: Original strand, 40613892 - 40614004
Alignment:
Q  13 gagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccacttaaggatatctatg 112  Q
    ||||||||| ||||||||||||||||||| |||||||||  || ||||||||||||||||||||||| ||||| | ||||||||| ||||||| ||||||    
T  40613892 gagagaaaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccacctaaggatgtctatg 40613991  T
Q  113 tatcataactcat 125  Q
    |||||||||||||    
T  40613992 tatcataactcat 40614004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 13438465 - 13438340
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||  | ||||||||||||||||||||||| ||||||| ||||| ||| ||    
T  13438465 aagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaggatgtattgtcaccta 13438366  T
Q  101 aggatatctatgtatcataactcatt 126  Q
    ||| | |||||||||||| |||||||    
T  13438365 agggtgtctatgtatcattactcatt 13438340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 42257315 - 42257193
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||| |||||| ||||||||| ||||||||||||||||||| |||||||||  || ||||||||||||| ||||||||| ||| ||| ||||||||| ||    
T  42257315 aagaaagaagaggagagaaaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttatgtgggtgtcaaatgatgtattgccaccta 42257216  T
Q  101 aggatatctatgtatcataactc 123  Q
    | ||| |||||||||||||||||    
T  42257215 aagatgtctatgtatcataactc 42257193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 2533245 - 2533124
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| |||| |||| | ||||||||||||||||| ||| |||||   | ||||||||||||||||||| ||| ||||||| ||||||||||||    
T  2533245 aagagagaagaggagataaaagaaaaagtgtgcttgtgcggggtctatgtggctacgtgtcagatttttgtgtgg-tgtcaaaggatgtattgccactta 2533147  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||||| |||||||||||||||||    
T  2533146 aggatgtctatgtatcataactc 2533124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 9058602 - 9058480
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| ||||||||||||||||||| |||||  |||  | ||||||||||||||||||||||| ||||| | ||||||||| ||    
T  9058602 aagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 9058503  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | |||||||||||| ||||    
T  9058502 agggtgtctatgtatcattactc 9058480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 33436078 - 33436200
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||||||||| ||| ||||||||||||||||||| ||||| ||||  | |||| |||||||||||||||||| ||||| | ||||||||| ||    
T  33436078 aagagagaagatgagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtattgccaccta 33436177  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | |||||||||||| ||||    
T  33436178 agggtgtctatgtatcattactc 33436200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 9e-27
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 28863577 - 28863460
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| |||| |||| ||||||||||||||||||| ||||| ||||  | ||||||||||||||||||||||| ||||| | ||||||||| ||    
T  28863577 aagagagaagaggagataaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 28863478  T
Q  101 aggatatctatgtatcat 118  Q
    ||| | ||||||||||||    
T  28863477 agggtgtctatgtatcat 28863460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 40701600 - 40701477
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||||||||||||| |||||||||| |||||||| ||||| || |  | ||||||||||||||||||||||| ||| | | ||||||||| ||    
T  40701600 aagagagaagatgagagaaaagagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccaccta 40701501  T
Q  101 aggatatctatgtatcataactca 124  Q
    ||| | |||||||||||| |||||    
T  40701500 agggtgtctatgtatcattactca 40701477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 17473142 - 17473020
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| |||||||||||||||||||  |||| ||||  | ||||||||||||||||||||||| ||||| | ||||||||  ||    
T  17473142 aagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatcta 17473043  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | |||||||||||| ||||    
T  17473042 agggtgtctatgtatcattactc 17473020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 30915585 - 30915463
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||||||||||||| ||||||||||||||| ||| ||||| ||||  | ||||||||||||| |||||| || ||||| | ||||||||| ||    
T  30915585 aagagagaagatgagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttatgtgggggtcaaagggtgtattgccaccta 30915486  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | |||||||||||| ||||    
T  30915485 agggtgtctatgtatcattactc 30915463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 32505626 - 32505748
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||  | ||||||||||||||||||||||| ||| | | ||||| ||| ||    
T  32505626 aagagagaagaggagagaaaatagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcaccta 32505725  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | |||||||||||| ||||    
T  32505726 agggtgtctatgtatcattactc 32505748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 36168958 - 36168836
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||| | ||||||||| ||||||| ||||||||||| |||||||||  || |||||| ||||||||||||| || ||||||| ||||| ||  ||    
T  36168958 aagagagaataggagagaaaagagaaagtatgcttgtgcggggtccatgtggccacgtgtcaaatttttgtgtgggagttaaaggatgtattgtcatcta 36168859  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||||| |||||||||||||||||    
T  36168858 aggatgtctatgtatcataactc 36168836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 38273120 - 38273242
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||| | ||||||||| |||||||||||| |||||| |||||||||   | ||||||||||||||||||||||| ||||| | ||||||||  ||    
T  38273120 aagagagaataggagagaaaagagaaagtgtgctagtgcggggtccatgtggctacgtgtcagatttttgtgtgggtgttaaagggtgtattgccatcta 38273219  T
Q  101 aggatatctatgtatcataactc 123  Q
    || || |||||||||||||||||    
T  38273220 agaatgtctatgtatcataactc 38273242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 132
Target Start/End: Complemental strand, 20700937 - 20700806
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||| ||| ||||||||||||| ||||| ||||| ||||  | ||||||||||||||||| || || ||||| | ||||||||| ||    
T  20700937 aagagagaagaggagaggaaagagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtaggagtcaaagggtgtattgccacata 20700838  T
Q  101 aggatatctatgtatcataactcattttgaaa 132  Q
    ||||| |||||||||||| |||| ||| ||||    
T  20700837 aggatgtctatgtatcattactcttttagaaa 20700806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 7465713 - 7465835
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| |||| |||| |||||||||||||||| || ||||| ||||  | ||||||||||||||||||||||| ||||| | ||||||||  ||    
T  7465713 aagagagaagaagagataaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccatcta 7465812  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | |||||||||||| ||||    
T  7465813 agggtgtctatgtatcattactc 7465835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 10249360 - 10249482
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||| |||| ||||||||| ||||||||||||||||||| ||||| ||||  | ||||||||||||||||||||||| ||| | | ||||| ||| ||    
T  10249360 aagagaaaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgtcaccta 10249459  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | |||||||||||| ||||    
T  10249460 agggtgtctatgtatcattactc 10249482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Original strand, 19930798 - 19930915
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| |||||||||| |||||||| |||||  |||  | ||||||||||||||||||| ||| ||||| | ||||||||| ||    
T  19930798 aagagagaagaggagagaaaagagaaagtgtgtttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccaccta 19930897  T
Q  101 aggatatctatgtatcat 118  Q
    ||| | ||||||||||||    
T  19930898 agggtgtctatgtatcat 19930915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 124
Target Start/End: Complemental strand, 4060807 - 4060684
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||||||||||||||||||||||||||| |||||  |||| || |  | ||||||||||||||||||| ||| ||| | | ||||| ||| ||    
T  4060807 aagagagaagatgagagaaaaaagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaaaggtgtattgtcaccta 4060708  T
Q  101 aggatatctatgtatcataactca 124  Q
    ||| | |||||||||||| |||||    
T  4060707 agggtgtctatgtatcattactca 4060684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 23 - 126
Target Start/End: Complemental strand, 27864804 - 27864701
Alignment:
Q  23 agaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccacttaaggatatctatgtatcataact 122  Q
    ||||||||||||| ||||| ||||| ||||| | ||||||||||||||||||| ||| ||||| | ||||||||| ||||| | |||||||||||| |||    
T  27864804 agaaagtgtgcttttgcggggtccacgtgattacgtgtcagatttttgtgtggatgtcaaagggtgtattgccacataagggtgtctatgtatcattact 27864705  T
Q  123 catt 126  Q
    ||||    
T  27864704 catt 27864701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 45097713 - 45097840
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||  ||| ||||||||| ||||||||| |||||| ||  ||  |||||||||||||| ||||||| || |||| ||||||||| ||    
T  45097713 aagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtatgggtgtcaagggatgtattgccaccta 45097812  T
Q  101 aggatatctatgtatcataactcatttt 128  Q
    ||||| | ||||||||||||||| ||||    
T  45097813 aggatgtttatgtatcataactcttttt 45097840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 33436333 - 33436211
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| || || ||| |||||||||||||||||  ||||||  || ||| ||||||||||||| ||||||||| ||| | | ||||||||  ||    
T  33436333 aagagagaagaggataggaaagagaaagtgtgcttgtgcaaagtccacatggtcacgtgtcagatttttatgtgggtgtcaaaaggtgtattgccatcta 33436234  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||||| |||||||||||| ||||    
T  33436233 aggatgtctatgtatcattactc 33436211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 38732476 - 38732354
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||  ||| ||||||||| ||||||||| |||||| ||| ||  |||||||||||||||||||||| || |||| ||||| ||| ||    
T  38732476 aagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacata 38732377  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | | |||||||||||||||    
T  38732376 agggtgtttatgtatcataactc 38732354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 14 - 123
Target Start/End: Original strand, 5574479 - 5574588
Alignment:
Q  14 agagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccacttaaggatatctatgt 113  Q
    |||||||| |||||||||||||||||||  |||| ||||  | ||||||||||||| ||||||||| ||||| | ||||||||| ||||  | |||||||    
T  5574479 agagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaaagggtgtattgccacctaagagtgtctatgt 5574578  T
Q  114 atcataactc 123  Q
    ||||| ||||    
T  5574579 atcattactc 5574588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 96
Target Start/End: Complemental strand, 13365475 - 13365380
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgcca 96  Q
    |||||||||||  |||  ||| ||||||||| ||||||||| |||||| || |||  |||||||||||||||||||||| || || ||||||||||    
T  13365475 aagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaaggggtatattgcca 13365380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 38882789 - 38882913
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggag---tccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccac 97  Q
    |||||| ||||| |||||||| |||||||| |||||||||| |   |||| ||||  | ||||||||||||||||||| ||| ||||| | |||||||||    
T  38882789 aagagataagataagagaaaagagaaagtgcgcttgtgcgggggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaagggt-tattgccac 38882887  T
Q  98 ttaaggatatctatgtatcataactc 123  Q
     ||||| | |||||||||||| ||||    
T  38882888 ctaagggtgtctatgtatcattactc 38882913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 3440101 - 3440023
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgt 79  Q
    ||||||||||| ||||| ||| ||||| ||||||||||||| ||||| || ||||  ||| ||||||||||||||||||    
T  3440101 aagagagaagaggagaggaaagagaaaatgtgcttgtgcggggtccacgtaatcacatgttagatttttgtgtgggtgt 3440023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 3738065 - 3737987
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgt 79  Q
    |||| |||||| ||||| ||||||||| ||||||||||||| |||||  ||| ||  ||||||||||||||||||||||    
T  3738065 aagaaagaagaggagaggaaaaagaaaatgtgcttgtgcggggtccacatgaccacatgtcagatttttgtgtgggtgt 3737987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 26891482 - 26891604
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||| ||| ||||| ||||||||| ||  ||||| |||| ||  ||||||||||||||||||||||  | || | ||||||||| ||    
T  26891482 aagagagaagagaagaggaaagagaaaatgtgcttgttcgaggtccacgtgaccacatgtcagatttttgtgtgggtgtctaggggtgtattgccaccta 26891581  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| |  ||||||||||||||||    
T  26891582 agggtggctatgtatcataactc 26891604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 43490243 - 43490118
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||  ||| | ||||||| ||||||||| |||||| ||  ||  |||||||||||||||||||||| || || | ||||| ||| ||    
T  43490243 aagagagaagagaagaagaaagataaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgtcaccta 43490144  T
Q  101 aggatatctatgtatcataactcatt 126  Q
    ||| | | ||||||||||||||||||    
T  43490143 agggtgtttatgtatcataactcatt 43490118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 17819982 - 17820105
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||  ||| ||||| |||| ||||| || ||||| || | ||  |||||||||||||||||||||| || || | ||||||||| ||    
T  17819982 aagagagaagaggagatgaaagagaaaatgtgtttgtgtggggtccacgtaaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccaccta 17820081  T
Q  101 aggatatctatgtatcataactca 124  Q
      | | ||||||||||||||||||    
T  17820082 tagttgtctatgtatcataactca 17820105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 1 - 103
Target Start/End: Original strand, 2997465 - 2997567
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||  ||| ||||||||| ||||||||| |||||| ||  ||  |||||||||||||||||||||| || || | ||||||||| ||    
T  2997465 aagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccaccta 2997564  T
Q  101 agg 103  Q
    |||    
T  2997565 agg 2997567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 57 - 123
Target Start/End: Complemental strand, 17823850 - 17823784
Alignment:
Q  57 gtgtcagatttttgtgtgggtgtaaaaggatatattgccacttaaggatatctatgtatcataactc 123  Q
    |||||||||||||||||||||||  | | || ||||||||| ||||||| | |||||||||| ||||    
T  17823850 gtgtcagatttttgtgtgggtgttcaggaatgtattgccacctaaggatgtatatgtatcattactc 17823784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 123
Target Start/End: Original strand, 15428775 - 15428840
Alignment:
Q  58 tgtcagatttttgtgtgggtgtaaaaggatatattgccacttaaggatatctatgtatcataactc 123  Q
    ||||||||||||||||| |||| || || | ||| ||||| ||||||| | |||||||||||||||    
T  15428775 tgtcagatttttgtgtgagtgttaaggggtgtatggccacataaggatgtttatgtatcataactc 15428840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 72; Significance: 9e-33; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 43414559 - 43414686
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| |||||||||||||||||||  ||||||||| || |||| |||||||||||||||||| ||||| | | ||||||  ||    
T  43414559 aagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccatgtgaccacgtgttagatttttgtgtgggtgtcaaagggtgtgttgccatcta 43414658  T
Q  101 aggatatctatgtatcataactcatttt 128  Q
    ||||| ||||||||||||||||||||||    
T  43414659 aggatgtctatgtatcataactcatttt 43414686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 504099 - 504226
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||||||||||||| |||| |||||||||||||| ||||| ||||  | ||||||||||||||||||||||| ||| | | ||||||||| ||    
T  504099 aagagagaagatgagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccaccta 504198  T
Q  101 aggatatctatgtatcataactcatttt 128  Q
    ||| | |||||||||||| |||||||||    
T  504199 agggtgtctatgtatcattactcatttt 504226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 40423921 - 40424044
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| ||||||||||||||||||| |||||  |||  | ||||||||||||||||||| ||| ||||| | ||||||||| ||    
T  40423921 aagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaaagggtgtattgccaccta 40424020  T
Q  101 aggatatctatgtatcataactca 124  Q
    ||| |||||||||||||| |||||    
T  40424021 agggtatctatgtatcattactca 40424044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 12831169 - 12831047
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||  | ||||||||||||||||||||||| ||||| | ||||| ||| ||    
T  12831169 aagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgtcaccta 12831070  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | |||||||||||| ||||    
T  12831069 agggtgtctatgtatcattactc 12831047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 121
Target Start/End: Original strand, 10621065 - 10621185
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| |||||||||||||||||||  || |||||   | ||||||||||||||||||||||| ||||| | |||| |||| ||    
T  10621065 aagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatcgatgtggctacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccaccta 10621164  T
Q  101 aggatatctatgtatcataac 121  Q
    ||||| |||||||||||||||    
T  10621165 aggatgtctatgtatcataac 10621185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 15048159 - 15048282
Alignment:
Q  1 aagagagaagatgagagaaaaa-agaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactt 99  Q
    ||||||||||| |||| ||||| ||||||||||||||||||| |||||||||   | ||||||||||||||||| ||||| ||||| | ||||||||| |    
T  15048159 aagagagaagaggagataaaaagagaaagtgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgt-ggtgtcaaagggtgtattgccacct 15048257  T
Q  100 aaggatatctatgtatcataactca 124  Q
    |||||| ||||||||||||||||||    
T  15048258 aaggatgtctatgtatcataactca 15048282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 125
Target Start/End: Complemental strand, 15197455 - 15197331
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||| |||| ||||||||| ||||||||||||||||||| ||||| ||||  | ||||||||||||||||||||||| ||||| | ||||||||| ||    
T  15197455 aagagaaaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 15197356  T
Q  101 aggatatctatgtatcataactcat 125  Q
    ||  | |||||||||||| ||||||    
T  15197355 agagtgtctatgtatcattactcat 15197331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 23122575 - 23122699
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||| | ||||||||| ||||||||||||| ||||| ||||| ||||  | ||||||||||||||||||||||| ||| | | ||||||||||||    
T  23122575 aagagagaacaggagagaaaagagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaaggtgtattgccactta 23122674  T
Q  101 aggatatctatgtatcataactcat 125  Q
    ||| | |||||||||||| ||||||    
T  23122675 agggtgtctatgtatcattactcat 23122699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 116
Target Start/End: Complemental strand, 14548044 - 14547929
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| ||||||||||||||||||| ||||| ||||  | ||||||||||||||||||||||| ||| | | ||||||||| ||    
T  14548044 aagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaatggtgtattgccaccta 14547945  T
Q  101 aggatatctatgtatc 116  Q
    ||| | ||||||||||    
T  14547944 agggtgtctatgtatc 14547929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 1179918 - 1180040
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| |||||||||||||||||||| ||||  |||  | ||||||||||||||||||||||| ||||| | |||| |||| ||    
T  1179918 aagagagaagaggagagaaaagagaaagtgtgcttgtgcggaatccacatgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattaccaccta 1180017  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | |||||||||||| ||||    
T  1180018 agggtgtctatgtatcattactc 1180040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 10284609 - 10284731
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||||| || ||| ||||||||||||||||||| ||||| ||||  | |||||| |||||||||||||||| ||||  | ||||| ||||||    
T  10284609 aagagagaagatgaaaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagagtgtattgtcactta 10284708  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | |||||||||||||||||    
T  10284709 agggtgtctatgtatcataactc 10284731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 37038601 - 37038479
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||| ||| |||||||||||||||||||  |||| ||||  | ||||||||||||||||||||||| ||||| | ||||||||| ||    
T  37038601 aagagagaagaggagaggaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 37038502  T
Q  101 aggatatctatgtatcataactc 123  Q
    | ||| |||||||||||| ||||    
T  37038501 aagatgtctatgtatcattactc 37038479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 34012274 - 34012398
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| |||||||||||||||||||  |||| ||||  | |||||| |||||||||||||||| ||||| | |||| |||| ||    
T  34012274 aagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaaagggtgtattaccaccta 34012373  T
Q  101 aggatatctatgtatcataactcat 125  Q
    ||| | |||||||||||| ||||||    
T  34012374 agggtgtctatgtatcattactcat 34012398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 4854841 - 4854963
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| ||||||||||||||||| | |||||||||  ||  | |||||||||| ||| ||||| ||||| | ||||||||| ||    
T  4854841 aagagagaagaggagagaaaagagaaagtgtgcttgtgcagggtccatgtggccacatatcagatttttatgtaggtgttaaagggtgtattgccaccta 4854940  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||||| |||||||||||| ||||    
T  4854941 aggatgtctatgtatcattactc 4854963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 44507065 - 44507187
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||||||||||||| ||||||| ||||||| ||| ||||| ||||  | ||||||||||||||||||||||| ||||  | |||| |||| ||    
T  44507065 aagagagaagatgagagaaaagagaaagtatgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgttaaagagtgtattaccaccta 44507164  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | |||||||||||| ||||    
T  44507165 agggtgtctatgtatcattactc 44507187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 1 - 118
Target Start/End: Complemental strand, 5957952 - 5957835
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||| ||| |||||||||| ||||||||  |||| ||||  | ||||||||||||||||||||||| ||||| | ||||||||| ||    
T  5957952 aagagagaagaggagaggaaagagaaagtgtgattgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaagggtgtattgccaccta 5957853  T
Q  101 aggatatctatgtatcat 118  Q
    || || ||||||||||||    
T  5957852 agaatgtctatgtatcat 5957835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 16056379 - 16056506
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||  ||| ||||||||| ||||||||| |||||| ||  ||  |||||||||||||||||||||| || |||| ||||| ||| ||    
T  16056379 aagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaagggatgtattgtcacata 16056478  T
Q  101 aggatatctatgtatcataactcatttt 128  Q
    ||||| | ||||||||||||||| ||||    
T  16056479 aggatgtttatgtatcataactcttttt 16056506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 42221637 - 42221515
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||||||||  ||| |||||||||||||||  || |||||| |||| | |||||||||||||||||||||||  | | || ||||| ||| ||    
T  42221637 aagagagaagatgagatgaaagagaaagtgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggtgtccaggaatgtattgtcaccta 42221538  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||||| | |||||||||| ||||    
T  42221537 aggatgtatatgtatcattactc 42221515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 4 - 103
Target Start/End: Original strand, 8841413 - 8841512
Alignment:
Q  4 agagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccacttaagg 103  Q
    |||||||| ||||| ||| ||||||||||||||||||| ||||| ||||  | |||| |||||||||||||||||| ||||| | || |||||| |||||    
T  8841413 agagaagaggagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaaagggtgtactgccacctaagg 8841512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 9122307 - 9122228
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgta 80  Q
    ||||||||||| ||||||||| |||||||||||||||||||  |||| ||||  |  |||||||||||||||||||||||    
T  9122307 aagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgta 9122228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 128
Target Start/End: Complemental strand, 16383499 - 16383372
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||  ||| ||||||||| ||||||||| |||||| ||  ||  |||||||||||||||||||||| || || | ||||||||| ||    
T  16383499 aagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccaccta 16383400  T
Q  101 aggatatctatgtatcataactcatttt 128  Q
    ||| | | ||||||||||||||| ||||    
T  16383399 agggtgtttatgtatcataactcttttt 16383372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 15258907 - 15259029
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||| ||| ||||| ||||||||||| | ||||| |||| ||  |||||||||||| ||||| |||  | |||| ||||||||  ||    
T  15258907 aagagagaagaggagaggaaagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagatttttatgtggatgtccagggatgtattgccatcta 15259006  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||  |||||||||||||||||||    
T  15259007 agagtatctatgtatcataactc 15259029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 123
Target Start/End: Original strand, 24307771 - 24307893
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||  ||| ||||||||| ||||||||| |||||| ||  ||  | |||||||||||||||||||| || |||| ||||||||| ||    
T  24307771 aagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatatcagatttttgtgtgggtgtcaagggatgtattgccaccta 24307870  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | | |||||||||||||||    
T  24307871 agggtgtttatgtatcataactc 24307893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 40467822 - 40467755
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttt 68  Q
    ||||||||||||||||| ||| |||||||||||||||||| |||||| ||| |||  |||||||||||    
T  40467822 aagagagaagatgagaggaaagagaaagtgtgcttgtgcgaagtccacgtggtcacatgtcagatttt 40467755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 34307338 - 34307216
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||  ||| ||||||||| ||||||||| || ||| ||  ||  |||||||||||||||||||||| || || | ||||||||| ||    
T  34307338 aagagagaagagaagaagaaagagaaagtgtacttgtgcggggttcatatgtccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccaccta 34307239  T
Q  101 aggatatctatgtatcataactc 123  Q
    ||| | | |||||||||||||||    
T  34307238 agggtgtttatgtatcataactc 34307216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 60 - 128
Target Start/End: Complemental strand, 24307692 - 24307624
Alignment:
Q  60 tcagatttttgtgtgggtgtaaaaggatatattgccacttaaggatatctatgtatcataactcatttt 128  Q
    |||||||||||||||||||| || |||| ||||||||| ||||| | | ||||||||||||||| ||||    
T  24307692 tcagatttttgtgtgggtgtcaatggatgtattgccacctaagggtgtttatgtatcataactcttttt 24307624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 20074968 - 20075036
Alignment:
Q  57 gtgtcagatttttgtgtgggtgtaaaaggatatattgccacttaaggatatctatgtatcataactcat 125  Q
    |||||| |||||| ||||||||| ||||  | ||||||||| ||||||| |||||||||||| ||||||    
T  20074968 gtgtcacatttttatgtgggtgtcaaagagtgtattgccacctaaggatgtctatgtatcattactcat 20075036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 4 - 52
Target Start/End: Complemental strand, 25838308 - 25838260
Alignment:
Q  4 agagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtga 52  Q
    |||||||| ||||||||| | ||||||||||||| ||||||||||||||    
T  25838308 agagaagaggagagaaaagaaaaagtgtgcttgtacggagtccatgtga 25838260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 30479452 - 30479579
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||  ||| ||||||||| ||||||||  |||||| |   ||  |||||||||||| ||||| ||| ||||| | ||||||||| ||    
T  30479452 aagagagaagagaagaagaaagagaaagtgtacttgtgcgaggtccatatagccacatgtcagatttttatgtggatgtcaaagggtgtattgccaccta 30479551  T
Q  101 aggatatctatgtatcataactcatttt 128  Q
    ||| | | ||||||||||||||| ||||    
T  30479552 agggtgtttatgtatcataactcctttt 30479579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 58 - 123
Target Start/End: Complemental strand, 32032789 - 32032725
Alignment:
Q  58 tgtcagatttttgtgtgggtgtaaaaggatatattgccacttaaggatatctatgtatcataactc 123  Q
    |||||||||||||||||| ||| || |||| ||||||||| ||||| | | |||||||||||||||    
T  32032789 tgtcagatttttgtgtggatgtcaa-ggatgtattgccacctaagggtgtttatgtatcataactc 32032725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 56; Significance: 3e-23; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 128
Target Start/End: Original strand, 10087 - 10214
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||||||| ||||||||||||||| ||  ||||| ||||  | ||||||||||||| ||||| ||| ||||||| ||||||||| ||    
T  10087 aagagagaagaggagagaaaagagaaagtgtgcttgtacgcggtccacgtgactacgtgtcagatttttatgtggatgtcaaaggatgtattgccaccta 10186  T
Q  101 aggatatctatgtatcataactcatttt 128  Q
    | | | ||||||||||||||||| ||||    
T  10187 aaggtgtctatgtatcataactcttttt 10214  T

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Target: scaffold1268 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 907 - 1032
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||| ||| |||||||||||||||||||  | || ||||  | ||||||| ||||||||||| ||| ||||| | ||||||||| ||    
T  907 aagagagaagaggagaggaaagagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccaccta 1006  T
Q  101 aggatatctatgtatcataactcatt 126  Q
    | ||| |||||||||||| |||||||    
T  1007 aagatgtctatgtatcattactcatt 1032  T

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Target: scaffold1267 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 907 - 1032
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||| ||||| ||| |||||||||||||||||||  | || ||||  | ||||||| ||||||||||| ||| ||||| | ||||||||| ||    
T  907 aagagagaagaggagaggaaagagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaaagggtgtattgccaccta 1006  T
Q  101 aggatatctatgtatcataactcatt 126  Q
    | ||| |||||||||||| |||||||    
T  1007 aagatgtctatgtatcattactcatt 1032  T

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Target: scaffold0110 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 124
Target Start/End: Original strand, 8841 - 8964
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    ||||||||||||| ||| ||| ||||| ||| |||||| || ||||| ||||  |||||||| |||||||||| | ||| |||   | ||||| ||||||    
T  8841 aagagagaagatgggaggaaagagaaaatgtacttgtgtggggtccacgtgactatgtgtcaaatttttgtgtagatgtcaaatagtgtattgtcactta 8940  T
Q  101 aggatatctatgtatcataactca 124  Q
    ||||| ||||| ||||||||||||    
T  8941 aggatgtctatatatcataactca 8964  T

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Target: scaffold0237 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 1 - 123
Target Start/End: Complemental strand, 4151 - 4029
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccactta 100  Q
    |||||||||||  |||||||| ||||||||||||| |||||  |||| || |  | ||||||||||||||||||||||| ||| | | ||||||||  ||    
T  4151 aagagagaagagaagagaaaagagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaaggtgtattgccatcta 4052  T
Q  101 aggatatctatgtatcataactc 123  Q
    | | | |||||||||||| ||||    
T  4051 aaggtgtctatgtatcattactc 4029  T

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Target: scaffold0316 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 14 - 75
Target Start/End: Complemental strand, 17163 - 17102
Alignment:
Q  14 agagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgg 75  Q
    |||| ||| ||||| ||||||||||||| |||||||||| ||  ||||||||||||||||||    
T  17163 agaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtgg 17102  T

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Target: scaffold0018 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 97
Target Start/End: Complemental strand, 152620 - 152524
Alignment:
Q  1 aagagagaagatgagagaaaaaagaaagtgtgcttgtgcggagtccatgtgatcatgtgtcagatttttgtgtgggtgtaaaaggatatattgccac 97  Q
    |||||||||||  |||  ||| |||||||||  ||||||||  ||||| ||| ||  |||||||||||||||||||||| || || | |||||||||    
T  152620 aagagagaagagaagaagaaagagaaagtgtatttgtgcgggatccatatgaccacatgtcagatttttgtgtgggtgtcaaggggtgtattgccac 152524  T

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