View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15680_low_19 (Length: 256)

Name: NF15680_low_19
Description: NF15680
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15680_low_19
NF15680_low_19
[»] chr3 (36 HSPs)
chr3 (117-256)||(51922515-51922654)
chr3 (117-256)||(8196672-8196811)
chr3 (117-256)||(8223140-8223279)
chr3 (117-252)||(9184041-9184173)
chr3 (119-256)||(17364682-17364819)
chr3 (117-256)||(16814835-16814972)
chr3 (117-256)||(18886361-18886499)
chr3 (117-256)||(18900787-18900925)
chr3 (119-256)||(17360040-17360177)
chr3 (117-256)||(18890604-18890742)
chr3 (117-253)||(27958238-27958370)
chr3 (117-255)||(13507695-13507837)
chr3 (117-255)||(18949897-18950034)
chr3 (117-255)||(41007578-41007714)
chr3 (117-255)||(41016357-41016493)
chr3 (117-255)||(50849399-50849535)
chr3 (117-256)||(2256392-2256528)
chr3 (117-255)||(50826325-50826459)
chr3 (117-255)||(39706814-39706949)
chr3 (117-256)||(17935032-17935180)
chr3 (117-256)||(27551100-27551241)
chr3 (124-255)||(4435399-4435525)
chr3 (124-255)||(4456190-4456316)
chr3 (124-255)||(30063087-30063213)
chr3 (117-255)||(18040863-18040999)
chr3 (117-255)||(8153585-8153721)
chr3 (124-247)||(14536879-14536997)
chr3 (117-255)||(3711565-3711693)
chr3 (117-255)||(27339316-27339444)
chr3 (27-77)||(51922695-51922745)
chr3 (117-256)||(9567723-9567861)
chr3 (157-234)||(27880188-27880265)
chr3 (117-256)||(27884546-27884682)
chr3 (217-255)||(21185868-21185906)
chr3 (166-256)||(43468531-43468620)
chr3 (27-72)||(18350428-18350477)
[»] chr2 (30 HSPs)
chr2 (117-256)||(24286642-24286780)
chr2 (117-256)||(24293210-24293348)
chr2 (117-255)||(20623369-20623505)
chr2 (117-255)||(20364987-20365126)
chr2 (157-256)||(26896983-26897082)
chr2 (117-256)||(34528305-34528442)
chr2 (117-256)||(34542279-34542416)
chr2 (117-255)||(41232772-41232908)
chr2 (117-255)||(25495617-25495754)
chr2 (117-256)||(44374820-44374955)
chr2 (117-256)||(44390401-44390536)
chr2 (117-255)||(6856414-6856548)
chr2 (117-255)||(17685394-17685529)
chr2 (117-255)||(42564834-42564970)
chr2 (117-255)||(42573458-42573594)
chr2 (117-255)||(26717954-26718089)
chr2 (117-255)||(26732087-26732222)
chr2 (117-255)||(15943447-15943583)
chr2 (117-255)||(15951958-15952094)
chr2 (117-255)||(35139638-35139774)
chr2 (117-255)||(35147979-35148115)
chr2 (117-255)||(35039722-35039857)
chr2 (157-255)||(20920524-20920622)
chr2 (117-256)||(17069322-17069458)
chr2 (117-256)||(17075315-17075451)
chr2 (117-256)||(17095865-17096001)
chr2 (117-181)||(44374490-44374551)
chr2 (18-72)||(34069797-34069855)
chr2 (18-72)||(42248598-42248656)
chr2 (157-256)||(21111064-21111162)
[»] scaffold0015 (3 HSPs)
scaffold0015 (117-255)||(188338-188475)
scaffold0015 (18-75)||(188238-188295)
scaffold0015 (18-72)||(193924-193982)
[»] chr6 (20 HSPs)
chr6 (117-256)||(33299893-33300032)
chr6 (117-255)||(5487377-5487513)
chr6 (118-255)||(14475356-14475494)
chr6 (117-255)||(15389674-15389809)
chr6 (117-256)||(20530953-20531093)
chr6 (117-255)||(23927361-23927495)
chr6 (117-255)||(25993350-25993485)
chr6 (117-250)||(5996427-5996559)
chr6 (117-255)||(19826833-19826968)
chr6 (117-255)||(35090595-35090731)
chr6 (117-255)||(25692781-25692918)
chr6 (117-255)||(25699422-25699559)
chr6 (117-255)||(25713516-25713653)
chr6 (117-255)||(27537188-27537323)
chr6 (117-255)||(27551397-27551532)
chr6 (117-255)||(25552184-25552320)
chr6 (117-255)||(30823436-30823572)
chr6 (124-256)||(13827540-13827666)
chr6 (117-255)||(13491802-13491937)
chr6 (207-255)||(12451773-12451821)
[»] chr1 (16 HSPs)
chr1 (119-256)||(32135564-32135698)
chr1 (117-255)||(13804309-13804444)
chr1 (117-256)||(2384982-2385121)
chr1 (117-255)||(13451842-13451980)
chr1 (117-256)||(28991559-28991703)
chr1 (117-255)||(31540970-31541106)
chr1 (117-255)||(31549539-31549675)
chr1 (117-255)||(43455850-43455987)
chr1 (117-255)||(3431858-3431995)
chr1 (124-256)||(41744956-41745083)
chr1 (124-256)||(28459601-28459728)
chr1 (117-255)||(23355875-23356009)
chr1 (157-256)||(51055569-51055668)
chr1 (117-256)||(36848953-36849094)
chr1 (117-255)||(11950131-11950264)
chr1 (18-72)||(21498030-21498088)
[»] scaffold0431 (1 HSPs)
scaffold0431 (117-255)||(4166-4303)
[»] chr5 (14 HSPs)
chr5 (119-255)||(19225643-19225776)
chr5 (117-255)||(21931236-21931372)
chr5 (117-256)||(1727074-1727212)
chr5 (117-255)||(31412625-31412762)
chr5 (117-255)||(20371000-20371134)
chr5 (117-255)||(20396703-20396837)
chr5 (117-255)||(24955750-24955886)
chr5 (117-255)||(24964210-24964346)
chr5 (117-255)||(28844958-28845094)
chr5 (117-255)||(28853568-28853704)
chr5 (117-255)||(43596965-43597100)
chr5 (117-255)||(43629759-43629894)
chr5 (157-255)||(31423570-31423668)
chr5 (18-72)||(41096776-41096834)
[»] chr4 (12 HSPs)
chr4 (117-255)||(10640158-10640296)
chr4 (117-255)||(12425672-12425809)
chr4 (117-255)||(772964-773099)
chr4 (117-256)||(1875802-1875940)
chr4 (117-256)||(1889917-1890055)
chr4 (117-256)||(21530563-21530704)
chr4 (117-255)||(12998342-12998481)
chr4 (117-255)||(27341966-27342101)
chr4 (117-255)||(8093191-8093327)
chr4 (117-255)||(8101996-8102132)
chr4 (117-255)||(20866084-20866214)
chr4 (190-255)||(52297571-52297635)
[»] chr8 (14 HSPs)
chr8 (117-256)||(17528843-17528984)
chr8 (117-256)||(16760608-16760746)
chr8 (117-256)||(16775045-16775183)
chr8 (117-255)||(30939299-30939435)
chr8 (120-255)||(25585306-25585438)
chr8 (117-255)||(39836468-39836604)
chr8 (117-255)||(39844510-39844646)
chr8 (117-256)||(17662725-17662860)
chr8 (117-256)||(17681854-17681989)
chr8 (124-255)||(4837820-4837952)
chr8 (119-247)||(26871693-26871820)
chr8 (117-255)||(17975443-17975579)
chr8 (117-255)||(23923313-23923450)
chr8 (117-253)||(26912989-26913123)
[»] chr7 (12 HSPs)
chr7 (117-255)||(13832522-13832658)
chr7 (117-255)||(13840552-13840688)
chr7 (117-255)||(10441983-10442119)
chr7 (117-255)||(1887183-1887318)
chr7 (117-255)||(1901284-1901419)
chr7 (117-255)||(18303319-18303454)
chr7 (117-255)||(24186381-24186516)
chr7 (117-255)||(4662146-4662281)
chr7 (117-256)||(33533616-33533753)
chr7 (117-255)||(17739644-17739780)
chr7 (117-256)||(43600359-43600496)
chr7 (117-255)||(4323571-4323706)
[»] scaffold0497 (1 HSPs)
scaffold0497 (117-255)||(12500-12635)
[»] scaffold1120 (1 HSPs)
scaffold1120 (117-256)||(1264-1398)
[»] scaffold0545 (1 HSPs)
scaffold0545 (117-256)||(8147-8287)
[»] scaffold0039 (1 HSPs)
scaffold0039 (117-255)||(38886-39023)
[»] scaffold0016 (1 HSPs)
scaffold0016 (117-255)||(25393-25528)
[»] scaffold0002 (2 HSPs)
scaffold0002 (117-256)||(122962-123096)
scaffold0002 (157-256)||(109202-109300)
[»] scaffold0091 (1 HSPs)
scaffold0091 (117-255)||(19571-19709)
[»] scaffold0278 (1 HSPs)
scaffold0278 (117-255)||(10193-10327)
[»] scaffold0007 (2 HSPs)
scaffold0007 (117-255)||(19536-19671)
scaffold0007 (117-255)||(26457-26592)
[»] scaffold0056 (1 HSPs)
scaffold0056 (217-255)||(29795-29833)
[»] scaffold0156 (1 HSPs)
scaffold0156 (163-255)||(33185-33276)


Alignment Details
Target: chr3 (Bit Score: 120; Significance: 2e-61; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 51922654 - 51922515
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||    
T  51922654 tattttcttaataaaccttggtttgtaacccaagtttgctttttccttttattttcttaatcaaatgcttaattgaattaatattcatactagacttgat 51922555  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  51922554 tttcttgtaattaaaatttgactaacctcaccttattttc 51922515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 8196811 - 8196672
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||    
T  8196811 tattttcttaataaaacttggtttgtaacccaagtttgctttttccttttattttcttaatcaaatgcttaattgaattaatattcatactagacttgat 8196712  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    ||||||| ||||||||||||||||||||||| ||||||||    
T  8196711 tttcttgaaattaaaatttgaccaacctcactttattttc 8196672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 8223279 - 8223140
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||| |||||||||| ||    
T  8223279 tattttcttaataaaacttggtttgtaacccaagtttgctttttccttttattttcttaatcaaatgcataattgaattaatattcatactagacttgat 8223180  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    ||||||| ||||||||||||||||||||||| ||||||||    
T  8223179 tttcttgaaattaaaatttgaccaacctcactttattttc 8223140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 117 - 252
Target Start/End: Complemental strand, 9184173 - 9184041
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |   |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  9184173 tattttcttaataaaccttggtttgtaacccaagtgt---ttttccttttattttcttaatcaaatgcttaattgaattaatattcataatagacttgat 9184077  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttat 252  Q
    ||||||||||||||||||||||||||||||||||||    
T  9184076 tttcttgtaattaaaatttgaccaacctcaccttat 9184041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 17364682 - 17364819
Alignment:
Q  119 ttttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttattt 218  Q
    ||||||||||||||||| ||| ||||||||||| |   |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||    
T  17364682 ttttcttaataaaccttggttagtaacccaagtgttttttttccttttattttcttaatcaaatgcttaattgaattaatattcataatagacttgattt 17364781  T
Q  219 tcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17364782 tcttgtaattaaaatttgaccaacctcaccttattttc 17364819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 16814972 - 16814835
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |   |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  16814972 tattttcttaataaaccttggtttgtaacccaagtgtt--ttttccttttattttcttaatcaaatgcttaattgaattaatattcatattagacttgat 16814875  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  16814874 tttcttgtaattaaaacttgaccaacctcaccttattttc 16814835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 18886499 - 18886361
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||| ||| |||||||| |||||||    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  18886499 tattttcttaataaaacttggtttgtaatccaagttgcttttttccttttattttcttaatcaaatgcttaattgaattaatattcatactagac-ttat 18886401  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  18886400 tttcttgtaattaaaatttgaccaacctcaccttattttc 18886361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 18900925 - 18900787
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||| ||| |||||||| |||||||    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  18900925 tattttcttaataaaacttggtttgtaatccaagttgcttttttccttttattttcttaatcaaatgcttaattgaattaatattcatactagac-ttat 18900827  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  18900826 tttcttgtaattaaaatttgaccaacctcaccttattttc 18900787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 119 - 256
Target Start/End: Original strand, 17360040 - 17360177
Alignment:
Q  119 ttttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttattt 218  Q
    ||||||||||||||||| ||| ||||||||||| |   |||||||||||||||||||||||||||||||||||||||||||||| || ||| ||| ||||    
T  17360040 ttttcttaataaaccttggttagtaacccaagtgttttttttccttttattttcttaatcaaatgcttaattgaattaatattcatattagtcttgattt 17360139  T
Q  219 tcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17360140 tcttgtaattaaaatttgaccaacctcaccttattttc 17360177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 18890742 - 18890604
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||| ||| |||||||| |||||||    |||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||    
T  18890742 tattttcttaataaaacttggtttgtaatccaagttgcttttttccttttattttcttaatcaaatgcttaattgaattaatattcatactagac-ttat 18890644  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  18890643 tttcttgtaattaaaatttgaccaacctcatcttattttc 18890604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 117 - 253
Target Start/End: Complemental strand, 27958370 - 27958238
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||| |||||||||||     ||||||||||||||||||||||||||||||||||||||||||||||  | ||||||||||    
T  27958370 tattttcttaataaaccttggttggtaacccaagt----gttttccttttattttcttaatcaaatgcttaattgaattaatattcacattagactttat 27958275  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatt 253  Q
    |||||||||||||||||||||||||||||||||||||    
T  27958274 tttcttgtaattaaaatttgaccaacctcaccttatt 27958238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 13507837 - 13507695
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagt----ttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagact 212  Q
    ||||||||||||||||||| | |||||||||||||    ||   |||||||||||||||||||||||||||||||||||||||||||||| || ||||||    
T  13507837 tattttcttaataaaccttggcttgtaacccaagtgttttttttttttccttttattttcttaatcaaatgcttaattgaattaatattcatattagact 13507738  T
Q  213 ttattttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    | |||||||||||||||||||||||||||||||||||||||||    
T  13507737 tgattttcttgtaattaaaatttgaccaacctcaccttatttt 13507695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 18950034 - 18949897
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgc-cttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagacttta 215  Q
    ||||||||||||||||||| | ||||||||||||  |||  |||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| |    
T  18950034 tattttcttaataaaccttggcttgtaacccaag--tgcttttttccttttatttccttaatcaaatgcttaattgaattaatattcataatagacttga 18949937  T
Q  216 ttttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  18949936 ttttcttgtaattaaaatttgaccaacctcaccttatttt 18949897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 41007578 - 41007714
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |  |||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  41007578 tattttcttaataaaccttggtttgtaacccaagtgt--ctttcctttttattttcttaatcaaatgcttaattgaattaatattcatattagacttgat 41007675  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||||||||||||| ||| |||||||||||||||||    
T  41007676 tttcttgtaattaaaatgtgaacaacctcaccttatttt 41007714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 41016357 - 41016493
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |  |||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  41016357 tattttcttaataaaccttggtttgtaacccaagtgt--ctttcctttttattttcttaatcaaatgcttaattgaattaatattcatattagacttgat 41016454  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||||||||||||| ||| |||||||||||||||||    
T  41016455 tttcttgtaattaaaatgtgaacaacctcaccttatttt 41016493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 50849535 - 50849399
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |   ||||||||||||||||||||||||||||||||||||||||| |||| || ||||||| |     
T  50849535 tattttcttaataaaccttggtttgtaacccaagtgttt-ttttccttttattttcttaatcaaatgcttaattgaattaacattcataatagacttga- 50849438  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||||||||||||||||||||||||||||||||||||||    
T  50849437 tttcttgtaattaaaatttgaccaacctcaccttatttt 50849399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 117 - 256
Target Start/End: Original strand, 2256392 - 2256528
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||||   |||||||||| |||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  2256392 tattttcttaataaaccttggtttgtaacccaagttg--cttttccttt-attttcttaatcaaatgcttaattgaattaatattcatattagacttgat 2256488  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    |||||| ||||||||| |||||||||||||||| ||||||    
T  2256489 tttcttctaattaaaacttgaccaacctcacctcattttc 2256528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 50826325 - 50826459
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |   ||||||||||||||||||||||||||||||||||||||||| |||| || ||||||| |     
T  50826325 tattttcttaataaaccttggtttgtaacccaagtgt---ttttccttttattttcttaatcaaatgcttaattgaattaacattcataatagacttga- 50826420  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  50826421 tttcttgtaattaaaatttgaccaacctcatcttatttt 50826459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 39706814 - 39706949
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |   ||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| |     
T  39706814 tattttcttaataaaccttggtttgtaacccaagtgt---tttcctttttattttcttaatcaaatgcttaattgaattaatattcataatagacttgac 39706910  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||  |||||||||||||||||||||||||||||||||||    
T  39706911 ttctttgtaattaaaatttgaccaacctcaccttatttt 39706949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 117 - 256
Target Start/End: Original strand, 17935032 - 17935180
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagt---------ttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtact 207  Q
    ||||||||||||||||||| |||||||||||||||         ||   |||||||||||||||||||||||||||||| ||||||||||||||| || |    
T  17935032 tattttcttaataaaccttggtttgtaacccaagtgtttttttttttttttttccttttattttcttaatcaaatgctttattgaattaatattcatatt 17935131  T
Q  208 agactttattttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    |||||| |||||||||||||||||| |||||||||||||||||||||||    
T  17935132 agacttgattttcttgtaattaaaacttgaccaacctcaccttattttc 17935180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 27551241 - 27551100
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgc---cttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactt 213  Q
    ||||||||||||||||||| | ||||||||||||| | |    ||||||||| |||||||||||||||||||||||||||||||||||| || |||||||    
T  27551241 tattttcttaataaaccttggcttgtaacccaagtgtccttttttttcctttcattttcttaatcaaatgcttaattgaattaatattcataatagactt 27551142  T
Q  214 tattttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
     | ||||||||||||||||||||||||||||||| ||||||||    
T  27551141 ga-tttcttgtaattaaaatttgaccaacctcactttattttc 27551100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 124 - 255
Target Start/End: Original strand, 4435399 - 4435525
Alignment:
Q  124 ttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttattttcttg 223  Q
    |||||||||||| |||||||||||||||     ||||||||||||||||||||||||||||||||||||||||| |||| || |||| |||  |||||||    
T  4435399 ttaataaaccttggtttgtaacccaagt----gttttccttttattttcttaatcaaatgcttaattgaattaacattcataataga-tttgatttcttg 4435493  T
Q  224 taattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||||||||||||||||||||||||||||    
T  4435494 taattaaaatttgaccaacctcaccttatttt 4435525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 124 - 255
Target Start/End: Original strand, 4456190 - 4456316
Alignment:
Q  124 ttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttattttcttg 223  Q
    |||||||||||| |||||||||||||||     ||||||||||||||||||||||||||||||||||||||||| |||| || |||| |||  |||||||    
T  4456190 ttaataaaccttggtttgtaacccaagt----gttttccttttattttcttaatcaaatgcttaattgaattaacattcataataga-tttgatttcttg 4456284  T
Q  224 taattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||||||||||||||||||||||||||||    
T  4456285 taattaaaatttgaccaacctcaccttatttt 4456316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 124 - 255
Target Start/End: Complemental strand, 30063213 - 30063087
Alignment:
Q  124 ttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttattttcttg 223  Q
    |||||||||||| |||||||||||||||     ||||||||||||||||||||||||||||||||||||||||| |||| || |||| |||  |||||||    
T  30063213 ttaataaaccttggtttgtaacccaagt----gttttccttttattttcttaatcaaatgcttaattgaattaacattcataataga-tttgatttcttg 30063119  T
Q  224 taattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||||||||||||||||||||||||||||    
T  30063118 taattaaaatttgaccaacctcaccttatttt 30063087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 18040863 - 18040999
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagacttta- 215  Q
    ||||||||||||||||||| ||| ||||||||| | |   ||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| |     
T  18040863 tattttcttaataaaccttggttcgtaacccaaatgt---tttcctttttattttcttaatcaaatgcttaattgaattaatattcatattagacttgat 18040959  T
Q  216 ttttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  18040960 ttttcttgtaattaaaatttgaacaacctcaccttatttt 18040999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 8153721 - 8153585
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttatttt-cttaatcaaatgcttaattgaattaatattcgtactagacttta 215  Q
    ||||||||||||||||||| | ||||||||||||||   |||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| |    
T  8153721 tattttcttaataaaccttggcttgtaacccaagttg--cttttccttttatttttcttaatcaaatgcttaattgaattaatattcataatagacttga 8153624  T
Q  216 ttttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||  |||||||||||||| || |||||||||||||||||    
T  8153623 tttctttgtaattaaaattcga-caacctcaccttatttt 8153585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 124 - 247
Target Start/End: Complemental strand, 14536997 - 14536879
Alignment:
Q  124 ttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttattttcttg 223  Q
    |||||||||||| ||| |||||||||||     ||||||||||||||||||||||||||||||||||||||||| |||| || ||||||| | |||||||    
T  14536997 ttaataaaccttggttcgtaacccaagt----gttttccttttattttcttaatcaaatgcttaattgaattaacattcataatagacttga-tttcttg 14536903  T
Q  224 taattaaaatttgaccaacctcac 247  Q
    ||||||||||||||||||||||||    
T  14536902 taattaaaatttgaccaacctcac 14536879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 3711565 - 3711693
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| | ||||||||||||| |   ||||||||||||||| ||||||||||||||||||||||||||||||            ||    
T  3711565 tattttcttaataaaccttggcttgtaacccaagtgttttttttccttttatttttttaatcaaatgcttaattgaattaatattc----------cgat 3711654  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||||||||||||||||||||||||||||||||||||||    
T  3711655 tttcttgtaattaaaatttgaccaacctcaccttatttt 3711693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 27339444 - 27339316
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |    |||||||||      |||||||||||||||||||||||||||||| || ||||||| ||    
T  27339444 tattttcttaataaaccttggtttgtaacccaagtgt----tttcctttt------ttaatcaaatgcttaattgaattaatattcataatagacttgat 27339355  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||  |||||||||||||| ||||||||||||||||||||    
T  27339354 ttctttgtaattaaaattagaccaacctcaccttatttt 27339316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 27 - 77
Target Start/End: Complemental strand, 51922745 - 51922695
Alignment:
Q  27 actacaaaattctcatacttttctttgctacgttagttttatatattatcg 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  51922745 actacaaaattctcatacttttctttgctacgttagttttatatattatcg 51922695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 9567861 - 9567723
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttt-tattttcttaatcaaatgcttaattgaattaatattcgtactagacttta 215  Q
    ||||||||||| |||||||   || ||| ||||||  ||||||| |||| |||||||||||||||||  |||||  | ||||||| | || |||| ||      
T  9567861 tattttcttaagaaaccttgaattttaatccaagt--gcctttttctttatattttcttaatcaaatctttaatcaatttaatatccatattagatttgg 9567764  T
Q  216 ttttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
     |||||| ||||||||||||||||||||||| |||||||||    
T  9567763 gtttcttataattaaaatttgaccaacctcatcttattttc 9567723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 234
Target Start/End: Original strand, 27880188 - 27880265
Alignment:
Q  157 ttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttattttcttgtaattaaaatt 234  Q
    ||||||||||||||||||||||||||| |||||  | ||||||| | || |||||||   ||||||||||||||||||    
T  27880188 ttttccttttattttcttaatcaaatgtttaatcaatttaatatccatattagacttgggtttcttgtaattaaaatt 27880265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 117 - 256
Target Start/End: Original strand, 27884546 - 27884682
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactt-ta 215  Q
    ||||||| |||||| |||| | || |||||||||| |   ||||||||||||||||||||||||||| |||||  | ||||||| | || ||||||| ||    
T  27884546 tattttcctaataagccttggattttaacccaagtgtt--ttttccttttattttcttaatcaaatgtttaatcaatttaatatccatattagacttgta 27884643  T
Q  216 ttttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    |||| |||||||||||| || |||||| ||| |||||||||    
T  27884644 tttt-ttgtaattaaaa-ttaaccaacttcatcttattttc 27884682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 217 - 255
Target Start/End: Complemental strand, 21185906 - 21185868
Alignment:
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||||||||||||||||| |||||||| ||||||||    
T  21185906 tttcttgtaattaaaatttgatcaacctcatcttatttt 21185868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 256
Target Start/End: Complemental strand, 43468620 - 43468531
Alignment:
Q  166 tattttcttaatcaaatgcttaattgaattaatattcgtactagactttattttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    |||||||||||||||||| |||||  | ||||||||| || |||||||   ||||||| |||||||| || | |||||||| |||||||||    
T  43468620 tattttcttaatcaaatgtttaatcaacttaatattcatattagacttggatttcttgcaattaaaa-ttaatcaacctcatcttattttc 43468531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 27 - 72
Target Start/End: Original strand, 18350428 - 18350477
Alignment:
Q  27 actacaaaattctcatacttttct----ttgctacgttagttttatatat 72  Q
    |||||||||||||||||||||| |    ||||||||||||||||||||||    
T  18350428 actacaaaattctcatacttttattttgttgctacgttagttttatatat 18350477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 112; Significance: 1e-56; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 117 - 256
Target Start/End: Original strand, 24286642 - 24286780
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||| ||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||    
T  24286642 tattttcttaataaaacttggtttgtaacccaagtt-gctttttccttttattttcttaatcaaatgcttaattgaattaatattcatactagacttgat 24286740  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  24286741 tttcttgtaattaaaatttgaccaacctcaccttattttc 24286780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 117 - 256
Target Start/End: Original strand, 24293210 - 24293348
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||| ||| |||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||    
T  24293210 tattttcttaataaaacttggtttgtaacccaagtt-gctttttccttttattttcttaatcaaatgcttaattgaattaatattcatactagacttgat 24293308  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  24293309 tttcttgtaattaaaatttgaccaacctcaccttattttc 24293348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 20623369 - 20623505
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| | ||||||||||||| |   |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  20623369 tattttcttaataaaccttggcttgtaacccaagtgtt--ttttccttttattttcttaatcaaatgcttaattgaattaatattcatagtagacttgat 20623466  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20623467 tttcttgtaattaaaatttgaccaacctcaccttatttt 20623505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 20365126 - 20364987
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgcctttt-ccttttattttcttaatcaaatgcttaattgaattaatattcgtactagacttta 215  Q
    ||||||||||||||||||| | | ||||||||||| | |||||| |||||||||||||||||||||||||||||||||||||||||| || ||||||| |    
T  20365126 tattttcttaataaaccttggctggtaacccaagtgtccctttttccttttattttcttaatcaaatgcttaattgaattaatattcataatagacttga 20365027  T
Q  216 ttttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  20365026 tttttttgtaattaaaatttgaccaacctcaccttatttt 20364987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 157 - 256
Target Start/End: Complemental strand, 26897082 - 26896983
Alignment:
Q  157 ttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttattttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  26897082 ttttccttttattttcttaatcaaatgcttaattgaattaatattcatactagacttgattttcttgtaattaaaatttgaccaacctcaccttattttc 26896983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 34528442 - 34528305
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |   ||||||||||||||||||||||||||||||||||||||||| |||| || ||||||| |     
T  34528442 tattttcttaataaaccttggtttgtaacccaagtgttt-ttttccttttattttcttaatcaaatgcttaattgaattaacattcataatagacttga- 34528345  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  34528344 tttcttgtaattaaaatttgaccaacctcaccttattttc 34528305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 34542416 - 34542279
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |   ||||||||||||||||||||||||||||||||||||||||| |||| || ||||||| |     
T  34542416 tattttcttaataaaccttggtttgtaacccaagtgttt-ttttccttttattttcttaatcaaatgcttaattgaattaacattcataatagacttga- 34542319  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  34542318 tttcttgtaattaaaatttgaccaacctcaccttattttc 34542279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 41232908 - 41232772
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |  |||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  41232908 tattttcttaataaaccttggtttgtaacccaagtgt--ctttcctttttattttcttaatcaaatgcttaattgaattaatattcatattagacttgat 41232811  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||||||||||||| ||| |||||||||||||||||    
T  41232810 tttcttgtaattaaaatgtgaacaacctcaccttatttt 41232772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 25495617 - 25495754
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    |||||| |||||||||||| | ||||||||||||| |   |||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| ||    
T  25495617 tatttttttaataaaccttggcttgtaacccaagtgttt-ttttccttttatttccttaatcaaatgcttaattgaattaatattcataatagacttgat 25495715  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||||||||||||||||||||||||||||||||||||||    
T  25495716 tttcttgtaattaaaatttgaccaacctcaccttatttt 25495754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 117 - 256
Target Start/End: Original strand, 44374820 - 44374955
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |   |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |     
T  44374820 tattttcttaataaaccttggtttgtaacccaagtgt---ttttccttttattttcttaatcaaatgcttaattgaattaatattcataatagacttga- 44374915  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    ||||||||||||||||| ||||||||||||| ||||||||    
T  44374916 tttcttgtaattaaaatctgaccaacctcactttattttc 44374955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 117 - 256
Target Start/End: Original strand, 44390401 - 44390536
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |   |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |     
T  44390401 tattttcttaataaaccttggtttgtaacccaagtgt---ttttccttttattttcttaatcaaatgcttaattgaattaatattcataatagacttga- 44390496  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    ||||||||||||||||| ||||||||||||| ||||||||    
T  44390497 tttcttgtaattaaaatctgaccaacctcactttattttc 44390536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 6856548 - 6856414
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |   ||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| |     
T  6856548 tattttcttaataaaccttggtttgtaacccaagtgt---tttcctttttattttcttaatcaaatgcttaattgaattaatattcataatagacttga- 6856453  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||||||||||||||||||||||||||||||||||||||    
T  6856452 tttcttgtaattaaaatttgaccaacctcaccttatttt 6856414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 17685529 - 17685394
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |   ||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  17685529 tattttcttaataaaccttggtttgtaacccaagtgt---tttcctttttattttcttaatcaaatgcttaattgaattaatattcataatagacttgat 17685433  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||  |||||||||||||||||||||||||||||||||||    
T  17685432 ttctttgtaattaaaatttgaccaacctcaccttatttt 17685394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 42564970 - 42564834
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |  |||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  42564970 tattttcttaataaaccttggtttgtaacccaagtgt--ctttcctttttattttcttaatcaaatgcttaattgaattaatattcatattagacttgat 42564873  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||||||||||||  ||| |||||||||||||||||    
T  42564872 tttcttgtaattaaaacgtgaacaacctcaccttatttt 42564834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 42573594 - 42573458
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |  |||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  42573594 tattttcttaataaaccttggtttgtaacccaagtgt--ctttcctttttattttcttaatcaaatgcttaattgaattaatattcatattagacttgat 42573497  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||||||||||||  ||| |||||||||||||||||    
T  42573496 tttcttgtaattaaaacgtgaacaacctcaccttatttt 42573458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 26718089 - 26717954
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |   ||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| |     
T  26718089 tattttcttaataaaccttggtttgtaacccaagtgt---tttcctttttattttcttaatcaaatgcttaattgaattaatattcataatagacttgac 26717993  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||  |||||||||||||||||||||||||||||||||||    
T  26717992 ttctttgtaattaaaatttgaccaacctcaccttatttt 26717954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 26732222 - 26732087
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |   ||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| |     
T  26732222 tattttcttaataaaccttggtttgtaacccaagtgt---tttcctttttattttcttaatcaaatgcttaattgaattaatattcataatagacttgac 26732126  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||  |||||||||||||||||||||||||||||||||||    
T  26732125 ttctttgtaattaaaatttgaccaacctcaccttatttt 26732087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 15943583 - 15943447
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |  |||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  15943583 tattttcttaataaaccttggtttgtaacccaagtgt--ctttcctttttattttcttaatcaaatgcttaattgaattaatattcatattagacttgat 15943486  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||||||||||||  ||| ||| |||||||||||||    
T  15943485 tttcttgtaattaaaacgtgaacaatctcaccttatttt 15943447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 15952094 - 15951958
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |  |||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  15952094 tattttcttaataaaccttggtttgtaacccaagtgt--ctttcctttttattttcttaatcaaatgcttaattgaattaatattcatattagacttgat 15951997  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||||||||||||  ||| ||| |||||||||||||    
T  15951996 tttcttgtaattaaaacgtgaacaatctcaccttatttt 15951958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 35139638 - 35139774
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |  |||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  35139638 tattttcttaataaaccttggtttgtaacccaagtgt--ctttcctttttattttcttaatcaaatgcttaattgaattaatattcatattagacttgat 35139735  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||||||||||||  ||| ||| |||||||||||||    
T  35139736 tttcttgtaattaaaacgtgaacaatctcaccttatttt 35139774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 35147979 - 35148115
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |  |||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  35147979 tattttcttaataaaccttggtttgtaacccaagtgt--ctttcctttttattttcttaatcaaatgcttaattgaattaatattcatattagacttgat 35148076  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||||||||||||  ||| ||| |||||||||||||    
T  35148077 tttcttgtaattaaaacgtgaacaatctcaccttatttt 35148115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 35039722 - 35039857
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    |||||||||||||||||||  |||||||||||||| |   ||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  35039722 tattttcttaataaaccttgatttgtaacccaagtgt---tttcctttttattttcttaatcaaatgcttaattgaattaatattcataatagacttgat 35039818  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||  |||||||||||||  ||||||||||||||||||||    
T  35039819 ttctttgtaattaaaatccgaccaacctcaccttatttt 35039857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 157 - 255
Target Start/End: Original strand, 20920524 - 20920622
Alignment:
Q  157 ttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttattttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||||||||||||||||||||||||||||||||  | |||| || | || ||||||| | |||||||||||||||||||||||||| ||| ||| ||||    
T  20920524 ttttccttttattttcttaatcaaatgcttaatcaatttaacatccatattagacttaaatttcttgtaattaaaatttgaccaacatcatcttttttt 20920622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 17069458 - 17069322
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| |  | |||||||||| |   ||||||||||||||||||||||||||| |||||  | |||| || | || |||||||       
T  17069458 tattttcttaataaaccttcgagtttaacccaagtgt---ttttccttttattttcttaatcaaatgtttaatcaatttaacatccatattagacttggg 17069362  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    |||||| |||||||||||||| |||||||| |||||||||    
T  17069361 tttcttataattaaaatttgatcaacctcatcttattttc 17069322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 17075451 - 17075315
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| |  | |||||||||| |   ||||||||||||||||||||||||||| |||||  | |||| || | || |||||||       
T  17075451 tattttcttaataaaccttcgagtttaacccaagtgt---ttttccttttattttcttaatcaaatgtttaatcaatttaacatccatattagacttggg 17075355  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    |||||| |||||||||||||| |||||||| |||||||||    
T  17075354 tttcttataattaaaatttgatcaacctcatcttattttc 17075315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 17096001 - 17095865
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| | || |||||||| | |   ||||||||||||||||||||||||||| |||||  | |||| || | || |||||||       
T  17096001 tattttcttaataaaccttcgattttaacccaaatgt---ttttccttttattttcttaatcaaatgtttaatcaatttaacatccatattagacttggg 17095905  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    |||||| |||||||||||||| |||||||| |||||||||    
T  17095904 tttcttataattaaaatttgatcaacctcatcttattttc 17095865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 181
Target Start/End: Original strand, 44374490 - 44374551
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaa 181  Q
    ||||||||||||||||||| ||||||||||||||| |   |||||||||||||||||||||||||    
T  44374490 tattttcttaataaaccttggtttgtaacccaagtgt---ttttccttttattttcttaatcaaa 44374551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 34069855 - 34069797
Alignment:
Q  18 aattctctaactacaaaattctcatact----tttctttgctacgttagttttatatat 72  Q
    ||||||||||||||||||||||||||||    |||| ||||||||||||||||||||||    
T  34069855 aattctctaactacaaaattctcatacttttatttcgttgctacgttagttttatatat 34069797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 42248656 - 42248598
Alignment:
Q  18 aattctctaactacaaaattctcatact----tttctttgctacgttagttttatatat 72  Q
    ||||||||||||||||||||||||||||    |||| ||||||||||||||||||||||    
T  42248656 aattctctaactacaaaattctcatacttttatttcattgctacgttagttttatatat 42248598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 256
Target Start/End: Original strand, 21111064 - 21111162
Alignment:
Q  157 ttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttattttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    |||||||||| |||||||||||||||| |||||  | |||||||   || |||| ||   |||||| ||||||||||||||||||||||| |||||||||    
T  21111064 ttttcctttt-ttttcttaatcaaatgtttaatcaatttaatatctatattagatttgggtttcttataattaaaatttgaccaacctcatcttattttc 21111162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 111; Significance: 4e-56; HSPs: 3)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 188338 - 188475
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| |||||||||||||||| || ||||| |||||||||||||||||||||||||||||||||||||||| |||||||||| ||    
T  188338 tattttcttaataaaccttggtttgtaacccaagtt-gctttttctttttattttcttaatcaaatgcttaattgaattaatattcatactagacttgat 188436  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||||||||||||||||||||||||||||||||||||||    
T  188437 tttcttgtaattaaaatttgaccaacctcaccttatttt 188475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 188238 - 188295
Alignment:
Q  18 aattctctaactacaaaattctcatacttttctttgctacgttagttttatatattat 75  Q
    |||||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  188238 aattctttaactacaaaattctcatacttttcattgctacattagttttatatattat 188295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Original strand, 193924 - 193982
Alignment:
Q  18 aattctctaactacaaaattctcatact----tttctttgctacgttagttttatatat 72  Q
    ||||||||||||||||||||||||||||    |||| ||||||||||||||||||||||    
T  193924 aattctctaactacaaaattctcatacttttatttcattgctacgttagttttatatat 193982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 104; Significance: 6e-52; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 117 - 256
Target Start/End: Original strand, 33299893 - 33300032
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |   |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  33299893 tattttcttaataaaccttggtttgtaacccaagtgttttttttccttttattttcttaatcaaatgcttaattgaattaatattcataatagacttgat 33299992  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  33299993 tttcttgtaattaaaatttgaccaacctcactttattttc 33300032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 5487513 - 5487377
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| | ||||||||||||| |   |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  5487513 tattttcttaataaaccttggcttgtaacccaagtgtt--ttttccttttattttcttaatcaaatgcttaattgaattaatattcatagtagacttgat 5487416  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5487415 tttcttgtaattaaaatttgaccaacctcaccttatttt 5487377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 118 - 255
Target Start/End: Original strand, 14475356 - 14475494
Alignment:
Q  118 attttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagacttta-t 216  Q
    |||||||||||||||||| | ||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| | |    
T  14475356 attttcttaataaaccttggcttgtaacccaagtgtcctttttccttttattttcttaatcaaatgcttaattgaattaatattcataatagacttgatt 14475455  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||| |||||||||||||||||||||||||||||||||||    
T  14475456 ttttttgtaattaaaatttgaccaacctcaccttatttt 14475494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 15389809 - 15389674
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |   |||||||||||||||||||||||||||||||||||||||||||||| |  ||||||| ||    
T  15389809 tattttcttaataaaccttggtttgtaacccaagtgt---ttttccttttattttcttaatcaaatgcttaattgaattaatattcatgatagacttgat 15389713  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||  |||||||||||||||||||||||||||||||||||    
T  15389712 ttctttgtaattaaaatttgaccaacctcaccttatttt 15389674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 20531093 - 20530953
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagt-ttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagacttta 215  Q
    ||||||||||||||||||| | ||||||||||||| |    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |    
T  20531093 tattttcttaataaaccttggcttgtaacccaagtgtctttttttccttttattttcttaatcaaatgcttaattgaattaatattcataatagacttga 20530994  T
Q  216 ttttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  20530993 ttttcttgtaattaaaattttaccaacctcaccttattttc 20530953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 23927361 - 23927495
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |   ||||| |||||||||||||||||||||||||||||||||||||||| || ||||||| |     
T  23927361 tattttcttaataaaccttggtttgtaacccaagtgt---ttttctttttattttcttaatcaaatgcttaattgaattaatattcataatagacttga- 23927456  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||||||||||||||||||||||||||||||||||||||    
T  23927457 tttcttgtaattaaaatttgaccaacctcaccttatttt 23927495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 25993350 - 25993485
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |   ||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  25993350 tattttcttaataaaccttggtttgtaacccaagtgt---tttcctttttattttcttaatcaaatgcttaattgaattaatattcatattagacttgat 25993446  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  25993447 tttcttgtaattaaaatttgaacaacctcaccttatttt 25993485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 117 - 250
Target Start/End: Original strand, 5996427 - 5996559
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgc-cttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagacttta 215  Q
    ||||||||||||||||||| | ||||||||||||  |||  |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |    
T  5996427 tattttcttaataaaccttggcttgtaacccaag--tgcttttttccttttattttcttaatcaaatgcttaattgaattaatattcataatagacttga 5996524  T
Q  216 ttttcttgtaattaaaatttgaccaacctcacctt 250  Q
    |||||||||||||||||||||||||||||||||||    
T  5996525 ttttcttgtaattaaaatttgaccaacctcacctt 5996559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 19826968 - 19826833
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |   ||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  19826968 tattttcttaataaaccttggtttgtaacccaagtgt---tttcctttttattttcttaatcaaatgcttaattgaattaatattcataatagacttgat 19826872  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||  |||||||||||||||||||||||||||||||||||    
T  19826871 ttctttgtaattaaaatttgaccaacctcaccttatttt 19826833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 35090731 - 35090595
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |  |||| | ||||||||||||||||||||| |||||||||||||||||| || ||||||| ||    
T  35090731 tattttcttaataaaccttggtttgtaacccaagtgt--ctttcctttttattttcttaatcaaatgtttaattgaattaatattcatattagacttgat 35090634  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||||||||||||| ||| |||||||||||||||||    
T  35090633 tttcttgtaattaaaatgtgaacaacctcaccttatttt 35090595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 25692781 - 25692918
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaa-ttgaattaatattcgtactagacttta 215  Q
    ||||||||||||||| ||| ||||||||||||||| |   |||||||||||||||||||||||||||||||| |||||||||||||| || | ||| | |    
T  25692781 tattttcttaataaatcttggtttgtaacccaagtgtt--ttttccttttattttcttaatcaaatgcttaaattgaattaatattcatattggacctga 25692878  T
Q  216 ttttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  25692879 ttttcttgtaattaaaatttgaccaacctcatcttatttt 25692918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 25699422 - 25699559
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaa-ttgaattaatattcgtactagacttta 215  Q
    ||||||||||||||| ||| ||||||||||||||| |   |||||||||||||||||||||||||||||||| |||||||||||||| || | ||| | |    
T  25699422 tattttcttaataaatcttggtttgtaacccaagtgtt--ttttccttttattttcttaatcaaatgcttaaattgaattaatattcatattggacctga 25699519  T
Q  216 ttttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  25699520 ttttcttgtaattaaaatttgaccaacctcatcttatttt 25699559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 25713516 - 25713653
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaa-ttgaattaatattcgtactagacttta 215  Q
    ||||||||||||||| ||| ||||||||||||||| |   |||||||||||||||||||||||||||||||| |||||||||||||| || | ||| | |    
T  25713516 tattttcttaataaatcttggtttgtaacccaagtgtt--ttttccttttattttcttaatcaaatgcttaaattgaattaatattcatattggacctga 25713613  T
Q  216 ttttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  25713614 ttttcttgtaattaaaatttgaccaacctcatcttatttt 25713653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 27537188 - 27537323
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |   ||| | ||||||||||||||||||||||||||||||||||| |||| || ||||||| |     
T  27537188 tattttcttaataaaccttggtttgtaacccaagtgt---tttcctttttattttcttaatcaaatgcttaattgaattaacattcataatagacttgac 27537284  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||  |||||||||||||||||||||||||||||||||||    
T  27537285 ttctttgtaattaaaatttgaccaacctcaccttatttt 27537323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 27551397 - 27551532
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |   ||| | ||||||||||||||||||||||||||||||||||| |||| || ||||||| |     
T  27551397 tattttcttaataaaccttggtttgtaacccaagtgt---tttcctttttattttcttaatcaaatgcttaattgaattaacattcataatagacttgac 27551493  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||  |||||||||||||||||||||||||||||||||||    
T  27551494 ttctttgtaattaaaatttgaccaacctcaccttatttt 27551532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 25552184 - 25552320
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |  |||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  25552184 tattttcttaataaaccttggtttgtaacccaagtgt--ctttcctttttattttcttaatcaaatgcttaattgaattaatattcatattagacttgat 25552281  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||| ||||||||||||| ||||   ||||||||||    
T  25552282 tttcttgcaattaaaatttgaacaacgcaaccttatttt 25552320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 30823572 - 30823436
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttatttt-cttaatcaaatgcttaattgaattaatattcgtactagacttta 215  Q
    ||||||||||||||||||| | ||||||||||||||   |||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| |    
T  30823572 tattttcttaataaaccttggcttgtaacccaagttg--cttttccttttatttttcttaatcaaatgcttaattgaattaatattcataatagacttga 30823475  T
Q  216 ttttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||  |||||||||||||| || |||||||||||||||||    
T  30823474 tttctttgtaattaaaattcga-caacctcaccttatttt 30823436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 124 - 256
Target Start/End: Original strand, 13827540 - 13827666
Alignment:
Q  124 ttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttattttcttg 223  Q
    |||||||||||| |||||||||||||||  ||  |||||||||||||||||||||||||||||||||||||||| |||| || ||||||| | |||||||    
T  13827540 ttaataaaccttggtttgtaacccaagt--gc--tttccttttattttcttaatcaaatgcttaattgaattaacattcataatagacttga-tttcttg 13827634  T
Q  224 taattaaaatttgaccaacctcaccttattttc 256  Q
    ||||| |||||||||||||||||| ||||||||    
T  13827635 taatt-aaatttgaccaacctcactttattttc 13827666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 13491802 - 13491937
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    |||||||||| |||||||| | || ||||||||||  |||||||||||||||||||||||||||||| |||||  | |||| || | || ||||||| |     
T  13491802 tattttcttagtaaaccttggattttaacccaagt--gccttttccttttattttcttaatcaaatgtttaatcaatttaacatccatattagacttgaa 13491899  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||||||||| ||||||||||||||||||| || |||||    
T  13491900 tttcttgtaa-taaaatttgaccaacctcatctcatttt 13491937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 207 - 255
Target Start/End: Complemental strand, 12451821 - 12451773
Alignment:
Q  207 tagactttattttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||| | |||||||||||||||||||||||||||||| ||||||||    
T  12451821 tagacttgaatttcttgtaattaaaatttgaccaacctcatcttatttt 12451773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 104; Significance: 6e-52; HSPs: 16)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 119 - 256
Target Start/End: Complemental strand, 32135698 - 32135564
Alignment:
Q  119 ttttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttattt 218  Q
    ||||||||||||||||| ||||||||||||||| |   |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||    
T  32135698 ttttcttaataaaccttggtttgtaacccaagtgt---ttttccttttattttcttaatcaaatgcttaattgaattaatattcatattagacttgattt 32135602  T
Q  219 tcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    ||||||||||||||||||||||||||||||||||||||    
T  32135601 tcttgtaattaaaatttgaccaacctcaccttattttc 32135564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 13804444 - 13804309
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||  |   |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  13804444 tattttcttaataaaccttggtttgtaacccaagggt---ttttccttttattttcttaatcaaatgcttaattgaattaatattcataatagacttgat 13804348  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  13804347 tttcttgtaattaaaatttgaccaacctcatcttatttt 13804309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 117 - 256
Target Start/End: Original strand, 2384982 - 2385121
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| |||||||||||||||||   |||| |||||||| ||||||||||||||||| |||||||||||||| || ||||||| ||    
T  2384982 tattttcttaataaaccttggtttgtaacccaagtttttttttttcttttattctcttaatcaaatgcttatttgaattaatattcatattagacttgat 2385081  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  2385082 tttcttgtaattaaaatttgatcaacctcaccttattttc 2385121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 13451842 - 13451980
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |   ||||||||||||||| |||||||||||||||||||||||||||||| || ||||||  ||    
T  13451842 tattttcttaataaaccttggtttgtaacccaagtgttttttttccttttattttattaatcaaatgcttaattgaattaatattcatattagactcgat 13451941  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||||||||||||||||||||| |||| ||||||||    
T  13451942 tttcttgtaattaaaatttgaccaagctcatcttatttt 13451980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 28991703 - 28991559
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagt-----ttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagac 211  Q
    ||||||||||||||||||| | |||||||||||||     ||   |||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  28991703 tattttcttaataaaccttggcttgtaacccaagtgtctttttttttttccttttattttcttaatcaaatgcttaattgaattaatattcataatagac 28991604  T
Q  212 tttattttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
     | ||||||||||||||||||||||||||||||||||||||||||    
T  28991603 ctgattttcttgtaattaaaatttgaccaacctcaccttattttc 28991559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 31540970 - 31541106
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |  |||| | |||||||||||||||||||||||||||||||||||||||| || || |||| ||    
T  31540970 tattttcttaataaaccttggtttgtaacccaagtgt--ctttcctttttattttcttaatcaaatgcttaattgaattaatattcatattaaacttgat 31541067  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||||||||||||| ||| |||||||||||||||||    
T  31541068 tttcttgtaattaaaatgtgaacaacctcaccttatttt 31541106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 31549539 - 31549675
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |  |||| | |||||||||||||||||||||||||||||||||||||||| || || |||| ||    
T  31549539 tattttcttaataaaccttggtttgtaacccaagtgt--ctttcctttttattttcttaatcaaatgcttaattgaattaatattcatattaaacttgat 31549636  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||||||||||||| ||| |||||||||||||||||    
T  31549637 tttcttgtaattaaaatgtgaacaacctcaccttatttt 31549675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 43455850 - 43455987
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||| ||||||||||| |   ||||||||||| |||||||||||||||||||||||| ||||||||| || ||||||| ||    
T  43455850 tattttcttaataaaccttggttggtaacccaagtgttt-ttttccttttactttcttaatcaaatgcttaattgacttaatattcatattagacttgat 43455948  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  43455949 tttcttgtaattaaaatttgaccaacctcatcttatttt 43455987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 3431995 - 3431858
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttatttt-cttaatcaaatgcttaattgaattaatattcgtactagacttta 215  Q
    ||||||||||||||||||| | ||||||||||||||   |||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| |    
T  3431995 tattttcttaataaaccttggcttgtaacccaagttg--cttttccttttatttttcttaatcaaatgcttaattgaattaatattcataatagacttga 3431898  T
Q  216 ttttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||  |||||||||||||| ||||||||||||||||||||    
T  3431897 tttctttgtaattaaaattcgaccaacctcaccttatttt 3431858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 124 - 256
Target Start/End: Complemental strand, 41745083 - 41744956
Alignment:
Q  124 ttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttattttcttg 223  Q
    |||||||||||| |||||||||||||||     ||||||||||||||||||||||||||||||||||||||||| |||| || ||||||| | |||||||    
T  41745083 ttaataaaccttggtttgtaacccaagt----gttttccttttattttcttaatcaaatgcttaattgaattaacattcataatagacttga-tttcttg 41744989  T
Q  224 taattaaaatttgaccaacctcaccttattttc 256  Q
    |||||||||||||||||||||||| ||||||||    
T  41744988 taattaaaatttgaccaacctcactttattttc 41744956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 124 - 256
Target Start/End: Original strand, 28459601 - 28459728
Alignment:
Q  124 ttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttattttcttg 223  Q
    |||||||||||| |||||||||| ||||     ||||||||||||||||||||||||||||||||||||||||| |||| || ||||||| | |||||||    
T  28459601 ttaataaaccttggtttgtaacctaagt----gttttccttttattttcttaatcaaatgcttaattgaattaacattcataatagacttga-tttcttg 28459695  T
Q  224 taattaaaatttgaccaacctcaccttattttc 256  Q
    |||||||||||||||||||||||| ||||||||    
T  28459696 taattaaaatttgaccaacctcactttattttc 28459728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 23356009 - 23355875
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||| ||||||||| |||||||| |||||| |   ||| | |||||||||||||||||||||||||||||||||||||||| || |||| || ||    
T  23356009 tattttcttgataaaccttggtttgtaatccaagtgt---tttcctttttattttcttaatcaaatgcttaattgaattaatattcatattagatttgat 23355913  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||| |||||||| || |||||||||||||| ||||    
T  23355912 tttcttgcaattaaaa-ttaaccaacctcaccttgtttt 23355875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 157 - 256
Target Start/End: Complemental strand, 51055668 - 51055569
Alignment:
Q  157 ttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttattttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    ||||||||||||||||| |||||||||||||||  | ||||||| | || ||||||| | |||||||||||||||||||||||||||||| |||||||||    
T  51055668 ttttccttttattttctcaatcaaatgcttaatcaatttaatatccatattagacttgagtttcttgtaattaaaatttgaccaacctcatcttattttc 51055569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 36849094 - 36848953
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagt--ttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagacttt 214  Q
    ||||||||||| ||||||| | || ||||||||||  ||   |||||||||||||||||||||||||||||||||  | ||||| | | || |||||||     
T  36849094 tattttcttaagaaaccttggattttaacccaagtgttttttttttccttttattttcttaatcaaatgcttaatcaatttaatctccatattagacttg 36848995  T
Q  215 attttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
      |||||| ||||||||||||||||||||||| |||||||||    
T  36848994 gatttcttataattaaaatttgaccaacctcatcttattttc 36848953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 11950131 - 11950264
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| |||||||||  |||    | ||||||||||||||||||||||||||| |||||  | |||| |||| |||||||||||      
T  11950131 tattttcttaataaaccttggtttgtaacataag----cgttttccttttattttcttaatcaaatgtttaatcaacttaacattcatactagactttga 11950226  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||| |||||||| || | |||||||| ||||||||    
T  11950227 tttcttgcaattaaaa-ttaatcaacctcatcttatttt 11950264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 21498088 - 21498030
Alignment:
Q  18 aattctctaactacaaaattctcatact----tttctttgctacgttagttttatatat 72  Q
    ||||||||||||||||||||||||||||    |||| ||||||||||||||||||||||    
T  21498088 aattctctaactacaaaattctcatacttttatttcattgctacgttagttttatatat 21498030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0431 (Bit Score: 99; Significance: 6e-49; HSPs: 1)
Name: scaffold0431
Description:

Target: scaffold0431; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 4166 - 4303
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||| | ||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  4166 tattttcttaataaaccgtggttcgtaacccaagtt-gctttttccttttattttcttaatcaaatgcttaattgaattaatattcatattagacttgat 4264  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  4265 tttcttgtaattaaaatttgaccaacctcatcttatttt 4303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 99; Significance: 6e-49; HSPs: 14)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 119 - 255
Target Start/End: Original strand, 19225643 - 19225776
Alignment:
Q  119 ttttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttattt 218  Q
    ||||||||||||||||| ||||||||||||||| |   |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||    
T  19225643 ttttcttaataaaccttggtttgtaacccaagtat---ttttccttttattttcttaatcaaatgcttaattgaattaatattcatattagacttgattt 19225739  T
Q  219 tcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||||||||||||||||||||||||||| ||||||||    
T  19225740 tcttgtaattaaaatttgaccaacctcatcttatttt 19225776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 21931236 - 21931372
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||| ||||||||||| |   |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  21931236 tattttcttaataaaccttggttagtaacccaagtgtt--ttttccttttattttcttaatcaaatgcttaattgaattaatattcatattagacttgat 21931333  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||||||||||||||||||||||||||||||||| ||||    
T  21931334 tttcttgtaattaaaatttgaccaacctcaccttgtttt 21931372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 94; E-Value: 6e-46
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 1727212 - 1727074
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttatttt-cttaatcaaatgcttaattgaattaatattcgtactagacttta 215  Q
    ||||||||||||||||||| | ||||||||||||||   |||||||||||||||| ||||||||||||||||||||||||||||||| || ||||| | |    
T  1727212 tattttcttaataaaccttggcttgtaacccaagttg--cttttccttttatttttcttaatcaaatgcttaattgaattaatattcataatagacctga 1727115  T
Q  216 ttttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  1727114 ttttcttgtaattaaaatttgaccaacctcaccttattttc 1727074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 31412625 - 31412762
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaa-tgcttaattgaattaatattcgtactagacttta 215  Q
    ||||||||||||||||||| ||||||||||||||||   |||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||| |    
T  31412625 tattttcttaataaaccttggtttgtaacccaagttg--cttttccttttattttcttaatcaaaatgcttaattgaattaatattcataatagacttga 31412722  T
Q  216 ttttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||  |||||||||||||||||||||||||||||||||||    
T  31412723 tttctttgtaattaaaatttgaccaacctcaccttatttt 31412762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 20371134 - 20371000
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |   ||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| |     
T  20371134 tattttcttaataaaccttggtttgtaacccaagtgt---tttcctttttattttcttaatcaaatgcttaattgaattaatattcataatagacttga- 20371039  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20371038 tttcttgtaattaaaatttgaccaacctcaccttatttt 20371000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 20396837 - 20396703
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |   ||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| |     
T  20396837 tattttcttaataaaccttggtttgtaacccaagtgt---tttcctttttattttcttaatcaaatgcttaattgaattaatattcataatagacttga- 20396742  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20396741 tttcttgtaattaaaatttgaccaacctcaccttatttt 20396703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 24955886 - 24955750
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |  |||| | |||||||||||||||||||||||||||||||||||||||| || || |||| ||    
T  24955886 tattttcttaataaaccttggtttgtaacccaagtgt--ctttcctttttattttcttaatcaaatgcttaattgaattaatattcatattaaacttgat 24955789  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||||||||||||| ||| |||||||||||||||||    
T  24955788 tttcttgtaattaaaatgtgaacaacctcaccttatttt 24955750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 24964346 - 24964210
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |  |||| | |||||||||||||||||||||||||||||||||||||||| || || |||| ||    
T  24964346 tattttcttaataaaccttggtttgtaacccaagtgt--ctttcctttttattttcttaatcaaatgcttaattgaattaatattcatattaaacttgat 24964249  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||||||||||||| ||| |||||||||||||||||    
T  24964248 tttcttgtaattaaaatgtgaacaacctcaccttatttt 24964210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 28844958 - 28845094
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |  |||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  28844958 tattttcttaataaaccttggtttgtaacccaagtgt--ctttcctttttattttcttaatcaaatgcttaattgaattaatattcatattagacttgat 28845055  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||||||||||||  ||| |||||||||||||||||    
T  28845056 tttcttgtaattaaaacgtgaacaacctcaccttatttt 28845094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 28853568 - 28853704
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |  |||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  28853568 tattttcttaataaaccttggtttgtaacccaagtgt--ctttcctttttattttcttaatcaaatgcttaattgaattaatattcatattagacttgat 28853665  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||||||||||||  ||| |||||||||||||||||    
T  28853666 tttcttgtaattaaaacgtgaacaacctcaccttatttt 28853704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 43597100 - 43596965
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |   ||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  43597100 tattttcttaataaaccttggtttgtaacccaagtgt---tttcctttttattttcttaatcaaatgcttaattgaattaatattcataatagacttgat 43597004  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||  |||||||||||||| ||||||||||||||||||||    
T  43597003 ttctttgtaattaaaattcgaccaacctcaccttatttt 43596965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 43629894 - 43629759
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |   ||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  43629894 tattttcttaataaaccttggtttgtaacccaagtgt---tttcctttttattttcttaatcaaatgcttaattgaattaatattcataatagacttgat 43629798  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||  |||||||||||||| ||||||||||||||||||||    
T  43629797 ttctttgtaattaaaattcgaccaacctcaccttatttt 43629759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 157 - 255
Target Start/End: Original strand, 31423570 - 31423668
Alignment:
Q  157 ttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttattttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||  |||||||||||||||||||||||||||||||||||    
T  31423570 ttttccttttattttcttaatcaaatgcttaattgaattaatattcataatagacttgatttctttgtaattaaaatttgaccaacctcaccttatttt 31423668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 18 - 72
Target Start/End: Complemental strand, 41096834 - 41096776
Alignment:
Q  18 aattctctaactacaaaattctcatact----tttctttgctacgttagttttatatat 72  Q
    ||||||||||||||||||||||||||||    |||| ||||||||||||||||||||||    
T  41096834 aattctctaactacaaaattctcatacttttatttcattgctacgttagttttatatat 41096776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 99; Significance: 6e-49; HSPs: 12)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 10640158 - 10640296
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| | ||||||||||||| |   |||| ||||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  10640158 tattttcttaataaaccttggcttgtaacccaagtgtttttttttcttttattttcttaatcaaatgcttaattgaattaatattcataatagacttgat 10640257  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||||||||||||||||||||||||||||||||||||||    
T  10640258 tttcttgtaattaaaatttgaccaacctcaccttatttt 10640296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 12425809 - 12425672
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||| | ||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  12425809 tattttcttaataaaccgtggttcgtaacccaagtt-gctttttccttttattttcttaatcaaatgcttaattgaattaatattcatattagacttgat 12425711  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  12425710 tttcttgtaattaaaatttgaccaacctcatcttatttt 12425672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 772964 - 773099
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||  |   |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  772964 tattttcttaataaaccttggtttgtaacccaagggt---ttttccttttattttcttaatcaaatgcttaattgaattaatattcataatagacttgat 773060  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  773061 tttcttgtaattaaaatttgactaacctcaccttatttt 773099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 1875940 - 1875802
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| | ||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |     
T  1875940 tattttcttaataaaccttggcttgtaacccaagtgtcctttttccttttattttcttaatcaaatgcttaattgaattaatattcataatagacttga- 1875842  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  1875841 tttcttgtaattaaaatttgaccaacctcactttattttc 1875802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 1890055 - 1889917
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| | ||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  1890055 tattttcttaataaaccttggcttgtaacccaagtgtcctttttccttttattttcttaatcaaatgcttaattgaattaatattcataatagacttgat 1889956  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    |||||||||||||||| |||||||||||||| ||||||||    
T  1889955 tttcttgtaattaaaa-ttgaccaacctcactttattttc 1889917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 21530704 - 21530563
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgc--cttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagacttt 214  Q
    ||||||||||||||||||| | ||||||||||||| | |   |||||||||||||||||||||||||||||||||||||||||||||| || |||||||     
T  21530704 tattttcttaataaaccttggcttgtaacccaagtgtcctttttttccttttattttcttaatcaaatgcttaattgaattaatattcataatagacttg 21530605  T
Q  215 attttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    |||||||||||||||||||||||||||||||| |||||||||    
T  21530604 attttcttgtaattaaaatttgaccaacctcatcttattttc 21530563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 12998342 - 12998481
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgcctttt--ccttttattttcttaatcaaatgcttaattgaattaatattcgtactagacttt 214  Q
    |||||| |||||||||||| |||||||||||||||| || ||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||     
T  12998342 tatttttttaataaaccttggtttgtaacccaagtt-gctttttttccttttattttcttaatcaaatgcttaattgaattaatattcatactagacttg 12998440  T
Q  215 attttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||  ||||||||||||||||||||||||||| |||||||    
T  12998441 atttctttgtaattaaaatttgaccaacctcactttatttt 12998481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 27342101 - 27341966
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |   ||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  27342101 tattttcttaataaaccttggtttgtaacccaagtgt---tttcctttttattttcttaatcaaatgcttaattgaattaatattcataatagacttgat 27342005  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||  |||||||||||||||||||||||||||||||||||    
T  27342004 ttctttgtaattaaaatttgaccaacctcaccttatttt 27341966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 8093327 - 8093191
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttatttt-cttaatcaaatgcttaattgaattaatattcgtactagacttta 215  Q
    ||||||||||||||||||| | ||||||||||||||   |||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| |    
T  8093327 tattttcttaataaaccttggcttgtaacccaagttg--cttttccttttatttttcttaatcaaatgcttaattgaattaatattcataatagacttga 8093230  T
Q  216 ttttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||  |||||||||||||| || |||||||||||||||||    
T  8093229 tttctttgtaattaaaattcga-caacctcaccttatttt 8093191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 8102132 - 8101996
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttatttt-cttaatcaaatgcttaattgaattaatattcgtactagacttta 215  Q
    ||||||||||||||||||| | ||||||||||||||   |||||||||||||||| ||||||||||||||||||||||||||||||| || ||||||| |    
T  8102132 tattttcttaataaaccttggcttgtaacccaagttg--cttttccttttatttttcttaatcaaatgcttaattgaattaatattcataatagacttga 8102035  T
Q  216 ttttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||  |||||||||||||| || |||||||||||||||||    
T  8102034 tttctttgtaattaaaattcga-caacctcaccttatttt 8101996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 20866214 - 20866084
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||  |   ||||||||||||||||||||||||||||||||||||||||||||||     | | || ||    
T  20866214 tattttcttaataaaccttggtttgtaacccaagggt---ttttccttttattttcttaatcaaatgcttaattgaattaatattc-----ataattgat 20866123  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  20866122 tttcttgtaattaaaatttgactaacctcaccttatttt 20866084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 190 - 255
Target Start/End: Original strand, 52297571 - 52297635
Alignment:
Q  190 tgaattaatattcgtactagactttattttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||||||||| || ||||||| ||||  |||||||||||||||||||||||||||||||||||    
T  52297571 tgaattaatattcataatagacttgattta-ttgtaattaaaatttgaccaacctcaccttatttt 52297635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 95; Significance: 1e-46; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 117 - 256
Target Start/End: Original strand, 17528843 - 17528984
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagt--ttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagacttt 214  Q
    ||||||||||||||||||| | |||||||||||||  ||   |||||||||||||||||||||| ||||||||||||||||||||||| || |||||||     
T  17528843 tattttcttaataaaccttggcttgtaacccaagtgttttttttttccttttattttcttaatctaatgcttaattgaattaatattcataatagacttg 17528942  T
Q  215 attttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  17528943 attttcttgtaattaaaatttgaccaacctcaccttattttc 17528984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 117 - 256
Target Start/End: Original strand, 16760608 - 16760746
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| | ||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |     
T  16760608 tattttcttaataaaccttggcttgtaacccaagtgtcctttttccttttattttcttaatcaaatgcttaattgaattaatattcataatagacttga- 16760706  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    ||||||||||||||||||||||||||| ||| ||||||||    
T  16760707 tttcttgtaattaaaatttgaccaaccgcactttattttc 16760746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 117 - 256
Target Start/End: Original strand, 16775045 - 16775183
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| | ||||||||||||| | | |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| |     
T  16775045 tattttcttaataaaccttggcttgtaacccaagtgtcctttttccttttattttcttaatcaaatgcttaattgaattaatattcataatagacttga- 16775143  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    ||||||||||||||||||||||||||| ||| ||||||||    
T  16775144 tttcttgtaattaaaatttgaccaaccgcactttattttc 16775183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 30939299 - 30939435
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |  |||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  30939299 tattttcttaataaaccttggtttgtaacccaagtgt--ctttcctttttattttcttaatcaaatgcttaattgaattaatattcatattagacttgat 30939396  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||||||||||||| ||| |||||||||||||||||    
T  30939397 tttcttgtaattaaaatgtgaacaacctcaccttatttt 30939435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 120 - 255
Target Start/End: Complemental strand, 25585438 - 25585306
Alignment:
Q  120 tttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttatttt 219  Q
    |||||||||||||||| ||||||||||||||| |   |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||     
T  25585438 tttcttaataaaccttggtttgtaacccaagtgt---ttttccttttattttcttaatcaaatgcttaattgaattaatattcataatagacttgatttc 25585342  T
Q  220 cttgtaattaaaatttgaccaacctcaccttatttt 255  Q
     |||||||||||||| ||||||||||||||||||||    
T  25585341 tttgtaattaaaattcgaccaacctcaccttatttt 25585306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 39836604 - 39836468
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |  |||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  39836604 tattttcttaataaaccttggtttgtaacccaagtgt--ctttcctttttattttcttaatcaaatgcttaattgaattaatattcatattagacttgat 39836507  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||||||||||||  ||| |||||||||||||||||    
T  39836506 tttcttgtaattaaaacgtgaacaacctcaccttatttt 39836468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 39844646 - 39844510
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |  |||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  39844646 tattttcttaataaaccttggtttgtaacccaagtgt--ctttcctttttattttcttaatcaaatgcttaattgaattaatattcatattagacttgat 39844549  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||||||||||||  ||| |||||||||||||||||    
T  39844548 tttcttgtaattaaaacgtgaacaacctcaccttatttt 39844510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 17662860 - 17662725
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| |||| |||||||||| |   ||||||||||||||||||||||||||||||||||||||||| |||| || ||||||| |     
T  17662860 tattttcttaataaaccttggtttataacccaagtgt---ttttccttttattttcttaatcaaatgcttaattgaattaacattcataatagacttga- 17662765  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  17662764 tttcttgtaattaaaatttgaccaacctcactttattttc 17662725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 17681989 - 17681854
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| |||| |||||||||| |   ||||||||||||||||||||||||||||||||||||||||| |||| || ||||||| |     
T  17681989 tattttcttaataaaccttggtttataacccaagtgt---ttttccttttattttcttaatcaaatgcttaattgaattaacattcataatagacttga- 17681894  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  17681893 tttcttgtaattaaaatttgaccaacctcactttattttc 17681854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 124 - 255
Target Start/End: Complemental strand, 4837952 - 4837820
Alignment:
Q  124 ttaataaaccttagtttgtaacccaagtttgccttttc--cttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttattttct 221  Q
    |||||||||||| |||||||||||||||| || ||||   ||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||  |    
T  4837952 ttaataaaccttggtttgtaacccaagtt-gcttttttttcttttattttcttaatcaaatgcttaattgaattaatattcataatagacttgatttctt 4837854  T
Q  222 tgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||||||||||||||||||||||||||||||    
T  4837853 tgtaattaaaatttgaccaacctcaccttatttt 4837820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 119 - 247
Target Start/End: Complemental strand, 26871820 - 26871693
Alignment:
Q  119 ttttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttattt 218  Q
    ||||||||||||||||| ||| ||||||||||| |   ||||| |||||||||||||||||||||||||||||||||||||||| || || |||| ||||    
T  26871820 ttttcttaataaaccttggttagtaacccaagtgttttttttc-ttttattttcttaatcaaatgcttaattgaattaatattcatattatacttgattt 26871722  T
Q  219 tcttgtaattaaaatttgaccaacctcac 247  Q
    |||||||||||||||||||||||||||||    
T  26871721 tcttgtaattaaaatttgaccaacctcac 26871693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 17975443 - 17975579
Alignment:
Q  117 tattttcttaa-taaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagacttta 215  Q
    ||||||||||| |||| ||| ||| ||||||||||| |   ||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| |    
T  17975443 tattttcttaagtaaaacttggttcgtaacccaagtgt---tttcctttttattttcttaatcaaatgcttaattgaattaatattcatattagacttga 17975539  T
Q  216 ttttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||| |||||||||||||||||| |||||||||||||||||    
T  17975540 tttgcttgtaattaaaatttgaacaacctcaccttatttt 17975579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 23923450 - 23923313
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactt-ta 215  Q
    ||||||||||||||||||| ||||||||||||||| |   |||||||||||||||||||||||||||||||||  | |||| ||   || |||||||  |    
T  23923450 tattttcttaataaaccttggtttgtaacccaagtgtt--ttttccttttattttcttaatcaaatgcttaatcaatttaacatcaatattagacttgga 23923353  T
Q  216 ttttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||  |||||||||||||||||||||||||| ||||||||    
T  23923352 tttctttgtaattaaaatttgaccaacctcatcttatttt 23923313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 253
Target Start/End: Complemental strand, 26913123 - 26912989
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| | || ||| |||||| |   ||||| ||||||||||||||||||||| |||||  | ||||||| | || |||| || |     
T  26913123 tattttcttaataaacctttgattttaatccaagtgtt--ttttctttttattttcttaatcaaatgtttaatcaatttaatatccatattagagttgag 26913026  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatt 253  Q
    |||| | ||||||||||||||||||||||| ||||||    
T  26913025 tttcgtataattaaaatttgaccaacctcatcttatt 26912989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 92; Significance: 9e-45; HSPs: 12)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 13832522 - 13832658
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |  |||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  13832522 tattttcttaataaaccttggtttgtaacccaagtgt--ctttcctttttattttcttaatcaaatgcttaattgaattaatattcatattagacttgat 13832619  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||||||||||||| ||| |||||||||||||||||    
T  13832620 tttcttgtaattaaaatgtgaacaacctcaccttatttt 13832658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 13840552 - 13840688
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |  |||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  13840552 tattttcttaataaaccttggtttgtaacccaagtgt--ctttcctttttattttcttaatcaaatgcttaattgaattaatattcatattagacttgat 13840649  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||||||||||||| ||| |||||||||||||||||    
T  13840650 tttcttgtaattaaaatgtgaacaacctcaccttatttt 13840688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 10441983 - 10442119
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |   ||||||||||||||||||||||||||||||||||||||||| |||| || ||||||| |     
T  10441983 tattttcttaataaaccttggtttgtaacccaagtgttt-ttttccttttattttcttaatcaaatgcttaattgaattaacattcataatagacttga- 10442080  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  10442081 tttcttgtaattaaaatttgaccaacctcatcttatttt 10442119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 1887318 - 1887183
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |   ||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| |     
T  1887318 tattttcttaataaaccttggtttgtaacccaagtgt---tttcctttttattttcttaatcaaatgcttaattgaattaatattcataatagacttgac 1887222  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||  |||||||||||||||||||||||||||||||||||    
T  1887221 ttctttgtaattaaaatttgaccaacctcaccttatttt 1887183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 1901419 - 1901284
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |   ||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| |     
T  1901419 tattttcttaataaaccttggtttgtaacccaagtgt---tttcctttttattttcttaatcaaatgcttaattgaattaatattcataatagacttgac 1901323  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||  |||||||||||||||||||||||||||||||||||    
T  1901322 ttctttgtaattaaaatttgaccaacctcaccttatttt 1901284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 18303454 - 18303319
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |   ||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  18303454 tattttcttaataaaccttggtttgtaacccaagtgt---tttcctttttattttcttaatcaaatgcttaattgaattaatattcataatagacttgat 18303358  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||  |||||||||||||| ||||||||||||||||||||    
T  18303357 ttctttgtaattaaaattcgaccaacctcaccttatttt 18303319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 24186516 - 24186381
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |   ||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| |     
T  24186516 tattttcttaataaaccttggtttgtaacccaagtgt---tttcctttttattttcttaatcaaatgcttaattgaattaatattcataatagacttgac 24186420  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||  |||||||||||||||||||||||||||||||||||    
T  24186419 ttctttgtaattaaaatttgaccaacctcaccttatttt 24186381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 4662281 - 4662146
Alignment:
Q  117 tattttcttaa-taaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagacttta 215  Q
    ||||||||||| |||||||| ||||||||||||||| |   ||||||||||||||||||||||||||||||||||||||||| |||| || ||||||| |    
T  4662281 tattttcttaaataaaccttggtttgtaacccaagtgt---ttttccttttattttcttaatcaaatgcttaattgaattaacattcataatagacttga 4662185  T
Q  216 ttttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
     ||||||||||||||||||||||||||||||| |||||||    
T  4662184 -tttcttgtaattaaaatttgaccaacctcactttatttt 4662146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 33533753 - 33533616
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    |||||||||| |||||||| | || ||||||||||  || ||||||||||||||||||||||||||| |||||  | ||||||| | || ||||||| |     
T  33533753 tattttcttagtaaaccttggattttaacccaagt--gctttttccttttattttcttaatcaaatgtttaatcaatttaatatccatattagacttgaa 33533656  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    |||||||||||||||||||||||||||||| |||||||||    
T  33533655 tttcttgtaattaaaatttgaccaacctcatcttattttc 33533616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 17739780 - 17739644
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    |||||||||||||||||||  |||||||||||| | |   |||| ||||||||||||||||||||||||||||  | |||| || | || ||||||| ||    
T  17739780 tattttcttaataaaccttgctttgtaacccaattgt---tttttcttttattttcttaatcaaatgcttaatcaatttaacatccatattagacttaat 17739684  T
Q  217 tttc-ttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||| || ||||||||||||||||||||||| ||||||||    
T  17739683 tttctttttaattaaaatttgaccaacctcatcttatttt 17739644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 117 - 256
Target Start/End: Original strand, 43600359 - 43600496
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||| ||||||| | || |||||||||| |   |||||||||||||||||||||||||||||||||  | ||||  | | || |||||||       
T  43600359 tattttcttaagaaaccttggattttaacccaagtgtt--ttttccttttattttcttaatcaaatgcttaatcaatttaacctccatattagacttgga 43600456  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    |||||| ||||||||||||  |||| |||| |||||||||    
T  43600457 tttcttataattaaaatttagccaatctcatcttattttc 43600496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 4323571 - 4323706
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    |||||||||| |||||||| | || |||||||||| |   ||||||||||||||||||||||||||| |||||  | ||||||| | || ||| |||       
T  4323571 tattttcttattaaaccttggattttaacccaagtgtt--ttttccttttattttcttaatcaaatgtttaatcaatttaatatccatattaggcttgga 4323668  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||| |||||||| || |||||| ||| ||||||||    
T  4323669 tttcttgcaattaaaa-ttaaccaacttcatcttatttt 4323706  T

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Target: scaffold0497 (Bit Score: 88; Significance: 2e-42; HSPs: 1)
Name: scaffold0497
Description:

Target: scaffold0497; HSP #1
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 12500 - 12635
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||||    ||||||||||||||||||||||||||||||||||||||||| |||| || ||||||| |     
T  12500 tattttcttaataaaccttggtttgtaacccaagttgt--ttttccttttattttcttaatcaaatgcttaattgaattaacattcataatagacttga- 12596  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  12597 tttcttgtaattaaaatttgaccaacctcatcttatttt 12635  T

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Target: scaffold1120 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold1120
Description:

Target: scaffold1120; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 117 - 256
Target Start/End: Original strand, 1264 - 1398
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| |||||||||||||||     ||||||||||||||||||||||||||||||||||||||||| |||| || ||||||| |     
T  1264 tattttcttaataaaccttggtttgtaacccaagt----gttttccttttattttcttaatcaaatgcttaattgaattaacattcataatagacttga- 1358  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  1359 tttcttgtaattaaaatttgaccaacctcactttattttc 1398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0545 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0545
Description:

Target: scaffold0545; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 117 - 256
Target Start/End: Complemental strand, 8287 - 8147
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgc--cttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagacttt 214  Q
    ||||||||||||||||||| | ||||||||||||| | |   |||||||||||||||||||||||||||||||||||||||||||||| || |||||||     
T  8287 tattttcttaataaaccttggcttgtaacccaagtgtcctttttttccttttattttcttaatcaaatgcttaattgaattaatattcataatagacttg 8188  T
Q  215 attttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    | |||||||||||||||||||||||||||||| |||||||||    
T  8187 a-tttcttgtaattaaaatttgaccaacctcatcttattttc 8147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0039 (Bit Score: 87; Significance: 8e-42; HSPs: 1)
Name: scaffold0039
Description:

Target: scaffold0039; HSP #1
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 39023 - 38886
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| | ||||||||||||| |   ||||| ||||||||||||||||||||||||||||||||||| |||| || ||||||| ||    
T  39023 tattttcttaataaaccttggcttgtaacccaagtgttttttttc-ttttattttcttaatcaaatgcttaattgaattaagattcataatagacttgat 38925  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  38924 tttcttgtaattaaaatttgaccaacctaaccttatttt 38886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 25393 - 25528
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| ||||||||||||||| |   ||| | |||||||||||||||||||||||||||||||||||||||| || ||||||| ||    
T  25393 tattttcttaataaaccttggtttgtaacccaagtgt---tttcctttttattttcttaatcaaatgcttaattgaattaatattcataatagacttgat 25489  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||  |||||||||||||| ||||||||||||||||||||    
T  25490 ttctttgtaattaaaattcgaccaacctcaccttatttt 25528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 83; Significance: 2e-39; HSPs: 2)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 117 - 256
Target Start/End: Original strand, 122962 - 123096
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| |||||||| ||||||     ||||||||||||||||||||||||||||||||||||||||| |||| || ||||||| |     
T  122962 tattttcttaataaaccttggtttgtaaaccaagt----gttttccttttattttcttaatcaaatgcttaattgaattaacattcataatagacttga- 123056  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    ||||||||||||||||||||||||||||||| ||||||||    
T  123057 tttcttgtaattaaaatttgaccaacctcactttattttc 123096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 157 - 256
Target Start/End: Original strand, 109202 - 109300
Alignment:
Q  157 ttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttattttcttgtaattaaaatttgaccaacctcaccttattttc 256  Q
    |||||||||||||||||||||||||||||||||||||||||||||| || ||||||| | ||||||||||||||||||||||||||||||| ||||||||    
T  109202 ttttccttttattttcttaatcaaatgcttaattgaattaatattcataatagacttga-tttcttgtaattaaaatttgaccaacctcactttattttc 109300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0091 (Bit Score: 79; Significance: 5e-37; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 19571 - 19709
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| || |||||||||||| |   |||| |||||||||||||||||||||||| ||||||||||| |||| || ||||||| ||    
T  19571 tattttcttaataaaccttggtctgtaacccaagtgtttttttttcttttattttcttaatcaaatgctaaattgaattaacattcatattagacttgat 19670  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    || |||||||||||||||||| |||||||| ||||||||    
T  19671 ttgcttgtaattaaaatttgaacaacctcatcttatttt 19709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 117 - 255
Target Start/End: Original strand, 10193 - 10327
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    ||||||||||||||||||| |  | ||||||||||     ||||||||||||||||||||| |||||||||||||||||||| ||| || ||||||| ||    
T  10193 tattttcttaataaaccttggactttaacccaagt----gttttccttttattttcttaattaaatgcttaattgaattaatgttcatattagacttgat 10288  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  10289 tttcttgtaattaaaatttgaccaacctcatcttatttt 10327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 52; Significance: 6e-21; HSPs: 2)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 19671 - 19536
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    |||||||||| |||||||| | || |||||||||| |   |||||||||||||| |||||||||||| |||||  | ||||||| | || ||||||| |     
T  19671 tattttcttagtaaaccttggatt-taacccaagtgtt--ttttccttttatttccttaatcaaatgtttaatcaatttaatatccatattagacttgaa 19575  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||||||||||||||||||||||||||| | ||||||||    
T  19574 tttcttgtaattaaaatttgaccaaccttaacttatttt 19536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007; HSP #2
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 117 - 255
Target Start/End: Complemental strand, 26592 - 26457
Alignment:
Q  117 tattttcttaataaaccttagtttgtaacccaagtttgccttttccttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttat 216  Q
    |||||||||| |||||||| | || ||||||||||   | |||| ||||||||| |||||||||||| |||||    ||||||| | || |||||||       
T  26592 tattttcttagtaaaccttggatt-taacccaagta--cttttttcttttatttccttaatcaaatgtttaatcattttaatatccatattagacttgga 26496  T
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    ||||||| ||||||||||||||||| |||| ||| ||||    
T  26495 tttcttgcaattaaaatttgaccaatctcatcttttttt 26457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 217 - 255
Target Start/End: Original strand, 29795 - 29833
Alignment:
Q  217 tttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||||||||||||||||||||||||||||||||||||||    
T  29795 tttcttgtaattaaaatttgaccaacctcaccttatttt 29833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0156 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0156
Description:

Target: scaffold0156; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 255
Target Start/End: Complemental strand, 33276 - 33185
Alignment:
Q  163 ttttattttcttaatcaaatgcttaattgaattaatattcgtactagactttattttcttgtaattaaaatttgaccaacctcaccttatttt 255  Q
    |||| ||||||| |||||||| ||||| || ||||||| | || |||||||   ||||||||||||||||  | |||||||||||||||||||    
T  33276 tttttttttctttatcaaatgtttaatcgatttaatatccatattagacttggatttcttgtaattaaaa-ctaaccaacctcaccttatttt 33185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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