View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15681_high_10 (Length: 249)
Name: NF15681_high_10
Description: NF15681
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15681_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 82; Significance: 8e-39; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 122 - 231
Target Start/End: Original strand, 37920605 - 37920714
Alignment:
| Q |
122 |
atctatttttatgtatagaaaaacccttaacctactttttaccaaactattgaacannnnnnnngtacaaactattgaacatttttatgcattataaaaa |
221 |
Q |
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| T |
37920605 |
atctatttttacgtatagaaaaacccttaacctactttttaccaaactattgaacattttttttgtacaaactattgaacatttttatgcattataaaaa |
37920704 |
T |
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| Q |
222 |
gtgaaaaaat |
231 |
Q |
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|||||||||| |
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| T |
37920705 |
gtgaaaaaat |
37920714 |
T |
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Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 13 - 47
Target Start/End: Original strand, 37920495 - 37920529
Alignment:
| Q |
13 |
aagaatatatctagtccaactccaatgtagatttg |
47 |
Q |
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| T |
37920495 |
aagaatatatccagtccaactccaatgtagatttg |
37920529 |
T |
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