View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15682_high_4 (Length: 314)

Name: NF15682_high_4
Description: NF15682
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15682_high_4
NF15682_high_4
[»] chr4 (15 HSPs)
chr4 (13-314)||(11847916-11848217)
chr4 (13-314)||(8045784-8046078)
chr4 (61-135)||(53483687-53483760)
chr4 (50-117)||(15408139-15408206)
chr4 (62-118)||(8834895-8834951)
chr4 (62-118)||(13888641-13888697)
chr4 (56-97)||(15747551-15747592)
chr4 (64-116)||(14486661-14486713)
chr4 (62-118)||(15245215-15245271)
chr4 (67-118)||(22724691-22724742)
chr4 (62-92)||(15069781-15069811)
chr4 (62-92)||(15076381-15076411)
chr4 (62-118)||(15308120-15308176)
chr4 (50-82)||(37837766-37837798)
chr4 (50-82)||(42596465-42596497)
[»] scaffold0006 (1 HSPs)
scaffold0006 (13-314)||(49989-50282)
[»] scaffold1773 (1 HSPs)
scaffold1773 (13-314)||(988-1281)
[»] scaffold0026 (2 HSPs)
scaffold0026 (13-314)||(11800-12097)
scaffold0026 (61-306)||(111504-111741)
[»] chr6 (26 HSPs)
chr6 (13-314)||(29614098-29614393)
chr6 (49-301)||(23057760-23058006)
chr6 (62-306)||(23839016-23839253)
chr6 (17-306)||(18800255-18800538)
chr6 (50-306)||(10986169-10986418)
chr6 (13-202)||(930047-930229)
chr6 (62-303)||(4477678-4477912)
chr6 (13-277)||(19785820-19786076)
chr6 (13-277)||(12168211-12168467)
chr6 (13-277)||(19878304-19878560)
chr6 (13-277)||(19287120-19287376)
chr6 (13-277)||(19884080-19884336)
chr6 (149-306)||(21565294-21565449)
chr6 (61-142)||(34639986-34640067)
chr6 (61-122)||(34646660-34646721)
chr6 (13-117)||(24512794-24512899)
chr6 (61-107)||(25469704-25469750)
chr6 (62-114)||(9187498-9187550)
chr6 (62-118)||(25348486-25348542)
chr6 (64-118)||(25598643-25598697)
chr6 (62-118)||(25397172-25397228)
chr6 (62-96)||(18659450-18659484)
chr6 (62-96)||(24441673-24441707)
chr6 (62-118)||(19471335-19471391)
chr6 (61-89)||(28288509-28288537)
chr6 (56-96)||(29415551-29415591)
[»] scaffold0924 (1 HSPs)
scaffold0924 (13-314)||(702-997)
[»] chr7 (27 HSPs)
chr7 (49-314)||(15167984-15168243)
chr7 (57-314)||(18873169-18873420)
chr7 (21-314)||(12709804-12710090)
chr7 (21-314)||(13122875-13123161)
chr7 (66-314)||(10895795-10896037)
chr7 (21-307)||(13743526-13743803)
chr7 (58-306)||(14422802-14423043)
chr7 (62-306)||(16009395-16009631)
chr7 (15-277)||(12590596-12590851)
chr7 (13-277)||(13007280-13007536)
chr7 (64-264)||(16677152-16677348)
chr7 (64-264)||(17651388-17651584)
chr7 (13-117)||(21230910-21231015)
chr7 (62-117)||(11382871-11382926)
chr7 (62-117)||(11389348-11389403)
chr7 (50-117)||(20311038-20311107)
chr7 (56-97)||(831628-831669)
chr7 (56-97)||(1196808-1196849)
chr7 (56-97)||(34958578-34958619)
chr7 (62-118)||(13679492-13679548)
chr7 (61-116)||(2971254-2971309)
chr7 (61-116)||(20906461-20906516)
chr7 (62-92)||(11311083-11311113)
chr7 (49-77)||(14129216-14129244)
chr7 (49-77)||(14136062-14136090)
chr7 (49-77)||(14433034-14433062)
chr7 (62-118)||(46625961-46626017)
[»] chr5 (13 HSPs)
chr5 (57-314)||(22750950-22751201)
chr5 (51-306)||(38144526-38144773)
chr5 (62-306)||(28370055-28370291)
chr5 (62-306)||(19512204-19512441)
chr5 (57-277)||(23528478-23528690)
chr5 (50-117)||(22438735-22438803)
chr5 (62-118)||(18407944-18408000)
chr5 (62-118)||(23111200-23111256)
chr5 (61-116)||(19236900-19236955)
chr5 (51-117)||(42961566-42961632)
chr5 (61-90)||(17021913-17021942)
chr5 (61-114)||(22461158-22461211)
chr5 (61-114)||(22467782-22467835)
[»] chr3 (20 HSPs)
chr3 (49-314)||(14762745-14763004)
chr3 (64-314)||(38310802-38311046)
chr3 (64-300)||(20247791-20248021)
chr3 (62-306)||(9534146-9534382)
chr3 (64-307)||(24192771-24193009)
chr3 (61-306)||(23370505-23370743)
chr3 (13-142)||(41455048-41455177)
chr3 (149-303)||(55499185-55499337)
chr3 (51-121)||(16801457-16801526)
chr3 (61-258)||(24933828-24934016)
chr3 (62-118)||(18929244-18929300)
chr3 (62-118)||(17240513-17240569)
chr3 (61-116)||(13302240-13302295)
chr3 (61-116)||(13323787-13323842)
chr3 (61-116)||(12033444-12033499)
chr3 (61-116)||(13312896-13312951)
chr3 (61-116)||(17131732-17131787)
chr3 (61-96)||(23392819-23392854)
chr3 (61-116)||(51301589-51301644)
chr3 (61-97)||(2247649-2247685)
[»] scaffold0029 (1 HSPs)
scaffold0029 (21-278)||(111726-111978)
[»] scaffold0117 (2 HSPs)
scaffold0117 (19-314)||(1856-2143)
scaffold0117 (19-314)||(8533-8820)
[»] chr8 (16 HSPs)
chr8 (21-314)||(23866423-23866709)
chr8 (64-314)||(8727735-8727979)
chr8 (61-306)||(44477441-44477678)
chr8 (61-306)||(44492599-44492836)
chr8 (159-306)||(27940946-27941091)
chr8 (13-277)||(17054439-17054694)
chr8 (49-118)||(18614271-18614340)
chr8 (62-118)||(23482053-23482109)
chr8 (50-117)||(14056552-14056619)
chr8 (62-118)||(39364919-39364975)
chr8 (50-117)||(25111976-25112043)
chr8 (49-116)||(29643373-29643440)
chr8 (61-116)||(24320670-24320725)
chr8 (51-117)||(27940841-27940907)
chr8 (62-118)||(21931696-21931752)
chr8 (50-82)||(44474690-44474722)
[»] scaffold0058 (1 HSPs)
scaffold0058 (13-307)||(109-394)
[»] scaffold0025 (1 HSPs)
scaffold0025 (64-307)||(14398-14635)
[»] chr2 (19 HSPs)
chr2 (49-306)||(19661441-19661690)
chr2 (62-306)||(6483536-6483772)
chr2 (62-306)||(6487003-6487239)
chr2 (13-264)||(26583687-26583931)
chr2 (149-306)||(23089137-23089292)
chr2 (149-306)||(23101545-23101700)
chr2 (148-306)||(23878826-23878982)
chr2 (61-135)||(5706023-5706096)
chr2 (62-118)||(21908358-21908414)
chr2 (62-118)||(23265141-23265197)
chr2 (62-118)||(23280209-23280265)
chr2 (62-118)||(24661576-24661632)
chr2 (61-116)||(10577-10632)
chr2 (61-116)||(25180929-25180984)
chr2 (64-122)||(23879002-23879060)
chr2 (62-122)||(23101463-23101524)
chr2 (52-133)||(26885166-26885246)
chr2 (50-114)||(23168287-23168351)
chr2 (50-114)||(23579544-23579608)
[»] chr1 (18 HSPs)
chr1 (62-306)||(20437024-20437261)
chr1 (13-142)||(41112010-41112139)
chr1 (49-118)||(32651571-32651640)
chr1 (62-118)||(18712798-18712854)
chr1 (62-117)||(19663517-19663572)
chr1 (62-118)||(20805320-20805376)
chr1 (62-117)||(11158093-11158148)
chr1 (64-118)||(10811785-10811839)
chr1 (61-116)||(20851132-20851187)
chr1 (61-116)||(20857759-20857814)
chr1 (61-116)||(21706276-21706331)
chr1 (61-116)||(21710818-21710873)
chr1 (62-92)||(24476350-24476380)
chr1 (62-92)||(25091418-25091448)
chr1 (63-96)||(18271338-18271371)
chr1 (63-96)||(18275992-18276025)
chr1 (50-82)||(11946472-11946504)
chr1 (49-77)||(21665177-21665205)
[»] scaffold0247 (1 HSPs)
scaffold0247 (13-306)||(11159-11446)
[»] scaffold0553 (1 HSPs)
scaffold0553 (61-306)||(10195-10433)
[»] scaffold0544 (1 HSPs)
scaffold0544 (61-306)||(1525-1763)
[»] scaffold0090 (1 HSPs)
scaffold0090 (51-307)||(17985-18235)
[»] scaffold0634 (1 HSPs)
scaffold0634 (227-314)||(3471-3558)
[»] scaffold0154 (1 HSPs)
scaffold0154 (13-136)||(30838-30962)
[»] scaffold0476 (1 HSPs)
scaffold0476 (149-306)||(3375-3531)
[»] scaffold0077 (1 HSPs)
scaffold0077 (149-306)||(3704-3859)
[»] scaffold0796 (2 HSPs)
scaffold0796 (56-258)||(1727-1920)
scaffold0796 (56-258)||(5750-5943)
[»] scaffold0456 (4 HSPs)
scaffold0456 (223-307)||(806-889)
scaffold0456 (223-307)||(7951-8034)
scaffold0456 (57-132)||(916-991)
scaffold0456 (57-132)||(8061-8136)
[»] scaffold0129 (1 HSPs)
scaffold0129 (55-135)||(45268-45347)
[»] scaffold0107 (1 HSPs)
scaffold0107 (13-117)||(40482-40587)
[»] scaffold2054 (1 HSPs)
scaffold2054 (20-114)||(717-810)
[»] scaffold0019 (1 HSPs)
scaffold0019 (13-117)||(135473-135578)
[»] scaffold0310 (1 HSPs)
scaffold0310 (50-117)||(17643-17711)
[»] scaffold0235 (1 HSPs)
scaffold0235 (13-115)||(22543-22646)
[»] scaffold0020 (1 HSPs)
scaffold0020 (62-118)||(101928-101984)
[»] scaffold0004 (2 HSPs)
scaffold0004 (49-118)||(116895-116964)
scaffold0004 (63-96)||(60441-60474)
[»] scaffold0222 (1 HSPs)
scaffold0222 (62-118)||(16819-16875)
[»] scaffold0461 (1 HSPs)
scaffold0461 (62-118)||(8-64)
[»] scaffold0146 (1 HSPs)
scaffold0146 (62-118)||(13631-13687)
[»] scaffold0815 (1 HSPs)
scaffold0815 (50-113)||(1453-1516)
[»] scaffold0124 (1 HSPs)
scaffold0124 (62-117)||(34276-34331)
[»] scaffold0138 (1 HSPs)
scaffold0138 (62-118)||(12296-12352)
[»] scaffold0790 (1 HSPs)
scaffold0790 (51-90)||(5480-5519)
[»] scaffold0139 (1 HSPs)
scaffold0139 (62-117)||(14997-15052)
[»] scaffold0001 (1 HSPs)
scaffold0001 (52-133)||(493019-493099)
[»] scaffold0317 (1 HSPs)
scaffold0317 (62-118)||(1385-1441)
[»] scaffold0096 (1 HSPs)
scaffold0096 (58-118)||(39503-39563)
[»] scaffold0348 (1 HSPs)
scaffold0348 (61-116)||(9336-9391)
[»] scaffold0127 (1 HSPs)
scaffold0127 (61-116)||(10239-10294)
[»] scaffold1318 (1 HSPs)
scaffold1318 (62-116)||(1913-1967)
[»] scaffold0261 (1 HSPs)
scaffold0261 (50-116)||(23558-23624)
[»] scaffold0067 (1 HSPs)
scaffold0067 (20-76)||(46689-46746)
[»] scaffold1128 (1 HSPs)
scaffold1128 (50-82)||(529-561)
[»] scaffold0335 (1 HSPs)
scaffold0335 (62-118)||(2628-2684)


Alignment Details
Target: chr4 (Bit Score: 294; Significance: 1e-165; HSPs: 15)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 294; E-Value: 1e-165
Query Start/End: Original strand, 13 - 314
Target Start/End: Complemental strand, 11848217 - 11847916
Alignment:
Q  13 agagaggagagcctagaaccgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaa 112  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11848217 agagaggagagcctagaaccgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaa 11848118  T
Q  113 aattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctc 212  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  11848117 aattgacctagtggcatagttttgaaaaattaaaatcaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctt 11848018  T
Q  213 ttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtg 312  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11848017 ttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtg 11847918  T
Q  313 ta 314  Q
    ||    
T  11847917 ta 11847916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 13 - 314
Target Start/End: Original strand, 8045784 - 8046078
Alignment:
Q  13 agagaggagagcctagaaccgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaa 112  Q
    ||||| ||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||    
T  8045784 agagatgagagcctagaaccgatccttgctgtcttattttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaa 8045883  T
Q  113 aattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctc 212  Q
    | |||||||| | ||||||||||| ||||      |||||||||||||||||||||| ||  ||||||||| | ||||||||| ||| |||||||| |||    
T  8045884 a-ttgacctaattgcatagttttggaaaa------taaattgagggttagggtttgacgagaattctgaagggaaatgggtaaagataatgttaattctc 8045976  T
Q  213 ttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtg 312  Q
    || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  8045977 ttgtaatataatgttcagaatgaaaacttaatccttgttgttgctgtgatcataaattgattgaaatttatgagtgattggatgaattgatgaatttgtg 8046076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 135
Target Start/End: Complemental strand, 53483760 - 53483687
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagtttt 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | | ||||||||    
T  53483760 ctaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagtttt 53483687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 15408206 - 15408139
Alignment:
Q  50 tttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattg 117  Q
    |||||||| | |||||||||||||||||||||||||||||||||||| | ||||||| ||||||||||    
T  15408206 tttctgcagatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 15408139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 8834951 - 8834895
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 118  Q
    ||||||||||||||| ||| |||||||| |||||||| ||||||| |||||||||||    
T  8834951 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 8834895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 13888697 - 13888641
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 118  Q
    ||||||||||||||| ||| |||||||| |||||||| ||||||| |||||||||||    
T  13888697 taaggtaagggtgaggctaactctcaatgatcataatgtataatttctgaaaattga 13888641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 15747551 - 15747592
Alignment:
Q  56 caaaactaaggtaagggtgagactatctctcaataatcataa 97  Q
    ||||||||||||||||||||||||| ||||||||||| ||||    
T  15747551 caaaactaaggtaagggtgagactaactctcaataattataa 15747592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 64 - 116
Target Start/End: Complemental strand, 14486713 - 14486661
Alignment:
Q  64 aggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 116  Q
    |||||||||||||||||||  ||||| |||||||| ||||||| |||||||||    
T  14486713 aggtaagggtgagactatccttcaatgatcataatatataatttctgaaaatt 14486661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 15245271 - 15245215
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 118  Q
    ||||||||||||||| ||| |||||||| ||| |||| ||||||| |||||||||||    
T  15245271 taaggtaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15245215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 67 - 118
Target Start/End: Original strand, 22724691 - 22724742
Alignment:
Q  67 taagggtgagactatctctcaataatcataatctataattcctgaaaattga 118  Q
    |||||||||||||||||||||||||| ||| | || |||| |||||||||||    
T  22724691 taagggtgagactatctctcaataataatagtatagaatttctgaaaattga 22724742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 92
Target Start/End: Complemental strand, 15069811 - 15069781
Alignment:
Q  62 taaggtaagggtgagactatctctcaataat 92  Q
    |||||||||||||||||||||||||||||||    
T  15069811 taaggtaagggtgagactatctctcaataat 15069781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 92
Target Start/End: Complemental strand, 15076411 - 15076381
Alignment:
Q  62 taaggtaagggtgagactatctctcaataat 92  Q
    |||||||||||||||||||||||||||||||    
T  15076411 taaggtaagggtgagactatctctcaataat 15076381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 15308176 - 15308120
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 118  Q
    |||| |||||||||| ||| |||||||| ||| |||| ||||||| |||||||||||    
T  15308176 taagttaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15308120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 37837766 - 37837798
Alignment:
Q  50 tttctgcaaaactaaggtaagggtgagactatc 82  Q
    ||||||||||| |||||||||||||||||||||    
T  37837766 tttctgcaaaattaaggtaagggtgagactatc 37837798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 42596465 - 42596497
Alignment:
Q  50 tttctgcaaaactaaggtaagggtgagactatc 82  Q
    ||||||||||| |||||||||||||||||||||    
T  42596465 tttctgcaaaattaaggtaagggtgagactatc 42596497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 13 - 314
Target Start/End: Complemental strand, 50282 - 49989
Alignment:
Q  13 agagaggagagcctagaaccgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaa 112  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50282 agagaggagagcctagaaccgatccttgctgtctaattttatgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaa 50183  T
Q  113 aattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctc 212  Q
    | |||||||| | ||||||||||| |||||      |||||||||||||||||||||||| |||| ||||| | |||||||||||||||||||||| |||    
T  50182 a-ttgacctaattgcatagttttggaaaat------aaattgagggttagggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctc 50090  T
Q  213 ttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtg 312  Q
    || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  50089 ttgtaatataatgttcagaatgaaaacttaatc-ttgttgttgctgtgatcataaattgattgaaatttatgagtgattggatgaattgatgaatttgtg 49991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 211; Significance: 1e-115; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 13 - 314
Target Start/End: Complemental strand, 1281 - 988
Alignment:
Q  13 agagaggagagcctagaaccgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaa 112  Q
    ||||||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1281 agagaggagagcctagaaccgatccttgctgtcttattttttgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaa 1182  T
Q  113 aattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctc 212  Q
    | |||||||| | ||||||||||| |||||      |||||||||||||||||||||||| |||| ||||| | |||||||||||||||||||||| |||    
T  1181 a-ttgacctaattgcatagttttggaaaat------aaattgagggttagggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctc 1089  T
Q  213 ttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtg 312  Q
    || |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  1088 ttgtaatataatgttcagaatgaaaacttaatc-ttgttgttgctgtgatcataaattgattgaaatttatgagtgattggatgaattgatgaatttgtg 990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 201; Significance: 1e-109; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 201; E-Value: 1e-109
Query Start/End: Original strand, 13 - 314
Target Start/End: Original strand, 11800 - 12097
Alignment:
Q  13 agagaggagagcctagaa-ccgattcttgctgtctaat-tttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg 110  Q
    |||||||||||||||||| ||||||| ||| || |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  11800 agagaggagagcctagaaaccgattcatgcagtataatctttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg 11899  T
Q  111 aaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcc 210  Q
    |||||||||||| | ||||||||||| ||||      ||||||||| ||||||||||||||| |||||||||| | |||||||||||||||||||||| |    
T  11900 aaaattgacctaattgcatagttttggaaaa------taaattgagagttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattc 11993  T
Q  211 tcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttg 310  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||    
T  11994 tcttgtaatataatcttcagaatgaaaacttaatctttgttgttgctgtgatcataagttgattgaaatttatgagtgattggatgaattgatgaatttg 12093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 61 - 306
Target Start/End: Complemental strand, 111741 - 111504
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggtt 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||| |||||      ||||||||||||    
T  111741 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaat------aaattgagggtt 111648  T
Q  161 agggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtg 260  Q
    |||||||||||| |||||||| | |||||||||| ||||||||||||| || || |||| ||||||| |||||||||||||||||| |  ||||| ||||    
T  111647 agggtttgatgatgattctgagg-ggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtg 111549  T
Q  261 atcataaattgattgaaaattatgagtgattggatgaattgatgaa 306  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||    
T  111548 atcataaattgattg-aaattatgattgattggatgaattgatgaa 111504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 198; Significance: 1e-108; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 13 - 314
Target Start/End: Original strand, 29614098 - 29614393
Alignment:
Q  13 agagaggagagcctagaaccgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaa 112  Q
    |||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  29614098 agagagtagaaccttgaaccgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaa 29614197  T
Q  113 aattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctc 212  Q
    |||||||||||| ||||| ||||| |     ||||||||||||||||||||||||||||| |||| ||||| | |||||||||||||||||||||| |||    
T  29614198 aattgacctagttgcataattttgga-----aaaataaattgagggttagggtttgatgatgattatgaagggaaatgggtaatgatcatgttaattctc 29614292  T
Q  213 ttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtg 312  Q
    || | ||  |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||||    
T  29614293 ttgt-attgaatgtttagaatgaaaacttaatctttgttgttgctgtgatcataacttgattgaaatttatgaatgattggatgaattgatgaatttgtg 29614391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 49 - 301
Target Start/End: Complemental strand, 23058006 - 23057760
Alignment:
Q  49 ttttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaat 148  Q
    |||||| | ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| | ||||||||||| || ||          
T  23058006 ttttcttctaaattaaggtaagggtgagactatctctcgataatcataatctataattcctgaaaattgacctaattgcatagttttggaagat------ 23057913  T
Q  149 aaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatcttt 248  Q
    |||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  23057912 aaattgagggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatcttt 23057813  T
Q  249 gttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattg 301  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23057812 gttgctgctgtgatcataaattgattgaaaattatgagtgattggatgaattg 23057760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 62 - 306
Target Start/End: Complemental strand, 23839253 - 23839016
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagt-tttgaaaaattaaaataaattgagggtt 160  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||| |||| || ||      ||||||||||||    
T  23839253 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtgtttggaagat------aaattgagggtt 23839160  T
Q  161 agggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtg 260  Q
    |||||||||||| |||||| ||| |||||||||| ||||||||||||| || || |||| |||||||||||||||||||||||||| |  ||||| ||||    
T  23839159 agggtttgatgatgattct-aaggggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtg 23839061  T
Q  261 atcataaattgattgaaaattatgagtgattggatgaattgatgaa 306  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||    
T  23839060 atcataaattgattg-aaattatgattgattggatgaattgatgaa 23839016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 17 - 306
Target Start/End: Complemental strand, 18800538 - 18800255
Alignment:
Q  17 aggagagcctag-aaccgattcttgctgtctaatt-ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaa 114  Q
    |||||||||||| |||||||| ||||||| ||||  |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  18800538 aggagagcctaggaaccgatt-ttgctgtgtaatccttctgcaaaactaatgtaagggtgagactatctctcaataatcataatctataatttctgaaaa 18800440  T
Q  115 ttgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctctt 214  Q
    |||||||| | || |||||||| |||||  ||     ||||||||||||||||||||| ||||||| || |||||| ||||||||||||||||| || ||    
T  18800439 ttgacctaattgcttagttttggaaaatagaa-----ttgagggttagggtttgatgatgattctggag-ggaatgagtaatgatcatgttaattctgtt 18800346  T
Q  215 ataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaa 306  Q
     |||| | ||||||| ||||||| |||||||| | |||||| |||||||| |||||||||||||| ||| | ||||||||||||||||||||    
T  18800345 gtaatgtgatgttcaaaatgaaatcttaatctatattgttgttgtgatcacaaattgattgaaaa-tataattgattggatgaattgatgaa 18800255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 50 - 306
Target Start/End: Original strand, 10986169 - 10986418
Alignment:
Q  50 tttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaata 149  Q
    |||||||||  ||||||||||||||||||||||| |||||||||||||||||||||| || |||||||||||| | ||||||||||   ||      |||    
T  10986169 tttctgcaattctaaggtaagggtgagactatctttcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaag-----ata 10986263  T
Q  150 aattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttg 249  Q
    ||||||||||||||||||||||| |||||||| | |||||||||| ||||||||||||| || || |||| |||||||||||||||||||||||||| |     
T  10986264 aattgagggttagggtttgatgatgattctgagg-ggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctata 10986362  T
Q  250 ttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaa 306  Q
     ||||| ||||||||||||||||||| |||||| || ||||||||||||||||||||    
T  10986363 ctgttgttgtgatcataaattgattg-aaattacgattgattggatgaattgatgaa 10986418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 13 - 202
Target Start/End: Original strand, 930047 - 930229
Alignment:
Q  13 agagaggagagcctagaaccgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaa 112  Q
    ||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||    
T  930047 agagaggagagcctagaaccgatccttgctgtcttattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaa 930146  T
Q  113 aattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcat 202  Q
    |||||||||| | | ||||||||||      ||||||||||||||||||||||||||||| | |||||||| ||||||||||||||||||    
T  930147 aattgacctaattgtatagttttga------aaaataaattgagggttagggtttgatgatgtttctgaag-ggaatgggtaatgatcat 930229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 62 - 303
Target Start/End: Complemental strand, 4477912 - 4477678
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggtta 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||   ||      |||||||| ||||||    
T  4477912 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaag-----ataaattgtgggtta 4477818  T
Q  162 gggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtga 261  Q
    ||||||||||| |||||||| | |||||||||| |||||||| |||| || || |||| ||||||| |||||||||||||||||| | |||||| |||||    
T  4477817 gggtttgatgatgattctgagg-ggaatgggtattgatcatgctaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtga 4477719  T
Q  262 tcataaattgattgaaaattatgagtgattggatgaattgat 303  Q
    |||||||||||||| ||||||||| ||||||||||| |||||    
T  4477718 tcataaattgattg-aaattatgattgattggatgatttgat 4477678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 13 - 277
Target Start/End: Original strand, 19785820 - 19786076
Alignment:
Q  13 agagaggagagcctagaac-cgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctga 111  Q
    ||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  19785820 agagaggagagcctagaaatcgatccttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg- 19785918  T
Q  112 aaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcct 211  Q
    ||||||||||||| | |||||||||       |||||||| |||  ||||||||||||||| ||||||||   |||||| |||| ||| |||||| |  |    
T  19785919 aaattgacctagttgaatagttttg------gaaaataaaatgaaagttagggtttgatgatgattctga--tggaatgagtaaagatgatgttagt-tt 19786009  T
Q  212 cttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgat-cataaattgattgaa 277  Q
    |||  ||| ||||||| |||| |||| |||||||  |||||||||||| || ||| |||||||||||    
T  19786010 cttggaatttaatgttaagaacgaaatcttaatccatgttgttgctgtaatccatgaattgattgaa 19786076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 13 - 277
Target Start/End: Complemental strand, 12168467 - 12168211
Alignment:
Q  13 agagaggagagcctagaac-cgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctga 111  Q
    ||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  12168467 agagaggagagcctagaaatcgatccttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg- 12168369  T
Q  112 aaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcct 211  Q
    ||||||||||| | | |||||||||       |||||||  |||  ||||||||||||||| ||||||||   |||||| |||| ||| |||||| |  |    
T  12168368 aaattgacctaattgaatagttttg------gaaaataagatgaaagttagggtttgatgatgattctga--tggaatgagtaaagatgatgttagt-tt 12168278  T
Q  212 cttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgat-cataaattgattgaa 277  Q
    |||  ||| ||||||| |||| |||| |||||||  |||||||||||| || ||| |||||||||||    
T  12168277 cttggaatttaatgttaagaacgaaatcttaatccatgttgttgctgtaatccatgaattgattgaa 12168211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 89; E-Value: 7e-43
Query Start/End: Original strand, 13 - 277
Target Start/End: Complemental strand, 19878560 - 19878304
Alignment:
Q  13 agagaggagagcctagaac-cgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctga 111  Q
    ||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  19878560 agagaggagagcctagaaatcgatccttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg- 19878462  T
Q  112 aaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcct 211  Q
    ||||||||||| | | |||||||||       |||||||  |||  ||||||||||||||| ||||||||   |||||| |||| ||| |||||| |  |    
T  19878461 aaattgacctaattgaatagttttg------gaaaataagatgaaagttagggtttgatgatgattctga--tggaatgagtaaagatgatgttagt-tt 19878371  T
Q  212 cttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgat-cataaattgattgaa 277  Q
    |||  ||| ||||||| |||| |||| |||||||  |||||||||||| || ||| |||||||||||    
T  19878370 cttggaatttaatgttaagaacgaaatcttaatccatgttgttgctgtaatccatgaattgattgaa 19878304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 277
Target Start/End: Complemental strand, 19287376 - 19287120
Alignment:
Q  13 agagaggagagcctagaac-cgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctga 111  Q
    ||||||||||||||||||  |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  19287376 agagaggagagcctagaaatcgatccttgttgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg- 19287278  T
Q  112 aaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcct 211  Q
    ||||||||||| | | |||||||||       |||||||  |||  ||||||||||||||| ||||||||   |||||| |||| ||| |||||| |  |    
T  19287277 aaattgacctaattgaatagttttg------gaaaataagatgaaagttagggtttgatgatgattctga--tggaatgagtaaagatgatgttagt-tt 19287187  T
Q  212 cttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgat-cataaattgattgaa 277  Q
    |||  ||| ||||||| |||| |||| |||||||  |||||||||||| || ||| |||||||||||    
T  19287186 cttggaatttaatgttaagaacgaaatcttaatccatgttgttgctgtaatccatgaattgattgaa 19287120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 277
Target Start/End: Complemental strand, 19884336 - 19884080
Alignment:
Q  13 agagaggagagcctagaac-cgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctga 111  Q
    ||||||||||||||||||  |||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||     
T  19884336 agagaggagagcctagaaatcgatccttgctgtctaattttctgcaaaactaaggttagggtgagactatctctcaataatcataatctataatttctg- 19884238  T
Q  112 aaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcct 211  Q
    ||||||||||| | | |||||||||       |||||||  |||  ||||||||||||||| ||||||||   |||||| |||| ||| |||||| |  |    
T  19884237 aaattgacctaattgaatagttttg------gaaaataagatgaaagttagggtttgatgatgattctga--tggaatgagtaaagatgatgttagt-tt 19884147  T
Q  212 cttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgat-cataaattgattgaa 277  Q
    |||  ||| ||||||| |||| |||| |||||||  |||||||||||| || ||| |||||||||||    
T  19884146 cttggaatttaatgttaagaacgaaatcttaatccatgttgttgctgtaatccatgaattgattgaa 19884080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 149 - 306
Target Start/End: Original strand, 21565294 - 21565449
Alignment:
Q  149 aaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatcttt 248  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||  | || |||| | | |||| |||||||| |||||||| |    
T  21565294 aaattgagggttagggtttgatgatgattct-aaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctat 21565392  T
Q  249 gttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaa 306  Q
      ||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||    
T  21565393 actgttgctgtgatcataaattgattgaaaa-tataattgattggatgaattgatgaa 21565449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 142
Target Start/End: Original strand, 34639986 - 34640067
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaat 142  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||| | | ||||||||| |||||    
T  34639986 ctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaatagttttggaaaat 34640067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 61 - 122
Target Start/End: Original strand, 34646660 - 34646721
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgaccta 122  Q
    ||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  34646660 ctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgaccta 34646721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 117
Target Start/End: Original strand, 24512794 - 24512899
Alignment:
Q  13 agagaggagagcctag-aaccgattcttgctgtctaat-tttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg 110  Q
    |||||| ||||||||| |||||||| |||||||  ||| |||||||||| ||||||| |||||||||||||||||||||||||||| | ||||||| |||    
T  24512794 agagagaagagcctaggaaccgatt-ttgctgtgcaatctttctgcaaatctaaggtgagggtgagactatctctcaataatcatagtatataatttctg 24512892  T
Q  111 aaaattg 117  Q
    |||||||    
T  24512893 aaaattg 24512899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 61 - 107
Target Start/End: Original strand, 25469704 - 25469750
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataattc 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  25469704 ctaaggtaagggtgagactatctctcaataatcataatctataattc 25469750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 62 - 114
Target Start/End: Complemental strand, 9187550 - 9187498
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaa 114  Q
    |||||||||||||||||||||||||||||||| ||||  |||||| |||||||    
T  9187550 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaa 9187498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 25348542 - 25348486
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 118  Q
    ||||||||||||||||||||||||||||||| ||| | || |||| |||||||||||    
T  25348542 taaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 25348486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 118
Target Start/End: Complemental strand, 25598697 - 25598643
Alignment:
Q  64 aggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 118  Q
    ||||||||||||||||| |||||||| |||||||| |||| || |||||||||||    
T  25598697 aggtaagggtgagactaactctcaatgatcataatatatattttctgaaaattga 25598643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 25397228 - 25397172
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 118  Q
    ||||||||||||||| ||| ||||| || |||||||| ||||||| |||||||||||    
T  25397228 taaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 25397172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 96
Target Start/End: Complemental strand, 18659484 - 18659450
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcata 96  Q
    ||||||||||||||||||| |||||||||||||||    
T  18659484 taaggtaagggtgagactaactctcaataatcata 18659450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 96
Target Start/End: Complemental strand, 24441707 - 24441673
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcata 96  Q
    ||||||||||||||||||| |||||||||||||||    
T  24441707 taaggtaagggtgagactaactctcaataatcata 24441673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 19471335 - 19471391
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 118  Q
    ||||||||||||||| ||| ||||| || |||||||| ||||||| ||| |||||||    
T  19471335 taaggtaagggtgaggctacctctcgatgatcataatatataatttctggaaattga 19471391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 89
Target Start/End: Original strand, 28288509 - 28288537
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaat 89  Q
    |||||||||||||||||||||||||||||    
T  28288509 ctaaggtaagggtgagactatctctcaat 28288537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 96
Target Start/End: Original strand, 29415551 - 29415591
Alignment:
Q  56 caaaactaaggtaagggtgagactatctctcaataatcata 96  Q
    ||||||||||||||| ||||| ||| |||||||||||||||    
T  29415551 caaaactaaggtaagagtgaggctaactctcaataatcata 29415591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 186; Significance: 1e-101; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 13 - 314
Target Start/End: Original strand, 702 - 997
Alignment:
Q  13 agagaggagagcctagaaccgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaa 112  Q
    |||||| |||| ||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  702 agagagaagagtctagaaccgatccttgctgtcttattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaa 801  T
Q  113 aattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctc 212  Q
    |||||||||| | ||||||||||   |||     |||||||||||||||||||||||||| |||| ||||| | ||||||||||||||||| |||| |||    
T  802 aattgacctaattgcatagtttttggaaa-----ataaattgagggttagggtttgatgaggattatgaagggaaatgggtaatgatcatgataatactc 896  T
Q  213 ttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtg 312  Q
    || ||||||||||||||| || ||||||||||| ||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||||||||||    
T  897 ttgtaatataatgttcaggataaaaacttaatc-ttgttgttgatgtgatcataaactgattgaaatttatgagtgattggatgaattgatgaatttgtg 995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 183; Significance: 5e-99; HSPs: 27)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 49 - 314
Target Start/End: Complemental strand, 15168243 - 15167984
Alignment:
Q  49 ttttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaat 148  Q
    |||||| | ||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| | ||||||||||| || ||          
T  15168243 ttttcttctaaattaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat------ 15168150  T
Q  149 aaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatcttt 248  Q
    |||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  15168149 aaattgagggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatcttt 15168050  T
Q  249 gttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgta 314  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15168049 gttgctgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgta 15167984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 57 - 314
Target Start/End: Complemental strand, 18873420 - 18873169
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgag 156  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||| | ||||||||||| || ||      ||||||||    
T  18873420 aaaactaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat------aaattgag 18873327  T
Q  157 ggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgc 256  Q
    |||||||||||||||| |||||||||| | |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||    
T  18873326 ggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgc 18873227  T
Q  257 tgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgta 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18873226 tgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgta 18873169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 21 - 314
Target Start/End: Original strand, 12709804 - 12710090
Alignment:
Q  21 gagcctagaaccgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacc 120  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  12709804 gagcctagaaccgattcttgctgtctaattt-ctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacc 12709901  T
Q  121 tagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcct-cttataat 219  Q
    || | ||||||||||| ||||      ||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||| ||  || ||||    
T  12709902 taattgcatagttttggaaaa------taaattgagggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaat 12709995  T
Q  220 ataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattga-ttgaaaattatgagtgattggatgaattgatgaatttgtgta 314  Q
    ||||||||||||||  |||||||||| ||||||||||||||||| |||| ||| ||| || |||||||||||||||||||||||||||||||||||    
T  12709996 ataatgttcagaatataaacttaatc-ttgttgttgctgtgatcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgta 12710090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 21 - 314
Target Start/End: Original strand, 13122875 - 13123161
Alignment:
Q  21 gagcctagaaccgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacc 120  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  13122875 gagcctagaaccgatccttgctgtctaattt-ctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacc 13122972  T
Q  121 tagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcct-cttataat 219  Q
    || | ||||||||||| ||||      ||||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||| ||  || ||||    
T  13122973 taattgcatagttttggaaaa------taaattgagggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaat 13123066  T
Q  220 ataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattga-ttgaaaattatgagtgattggatgaattgatgaatttgtgta 314  Q
    ||||||||||||||  |||||||||| ||||||||||||||||| |||| ||| ||| || |||||||||||||||||||||||||||||||||||    
T  13123067 ataatgttcagaatataaacttaatc-ttgttgttgctgtgatcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgta 13123161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 66 - 314
Target Start/End: Original strand, 10895795 - 10896037
Alignment:
Q  66 gtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggt 165  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||| | ||||||||||   ||      |||||||| ||||||||||    
T  10895795 gtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcatagtttttggaag-----ataaattgtgggttagggt 10895889  T
Q  166 ttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcat 265  Q
    ||||||| |||||||| | |||||||||| ||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  10895890 ttgatgatgattctgagg-ggaatgggtattgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcat 10895988  T
Q  266 aaattgattgaaaattatgagtgattggatgaattgatgaatttgtgta 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  10895989 aaattgattgaaaattatgagtgattggatgaattgatgaatttgtgta 10896037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 148; E-Value: 4e-78
Query Start/End: Original strand, 21 - 307
Target Start/End: Complemental strand, 13743803 - 13743526
Alignment:
Q  21 gagcctagaaccgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacc 120  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||    
T  13743803 gagcctagaaccgatccttgctgtctaattt-ctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctg-aaattgacc 13743706  T
Q  121 tagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataata 220  Q
    || | |||||||||||       ||||||||||||||||||||||||||||| |||| ||||||| ||||||||||||||||||||||  |||| || ||    
T  13743705 taattgcatagttttg------gaaaataaattgagggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattttcttgtatta 13743612  T
Q  221 taatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaat 307  Q
    |  |||||||| |||| ||||||||| |||| ||||||||||||||||||| ||| ||||||||  || |||||| |||||||||||    
T  13743611 tgctgttcagattgaagacttaatctatgttattgctgtgatcataaattggttg-aaattatgcttggttggataaattgatgaat 13743526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 58 - 306
Target Start/End: Complemental strand, 14423043 - 14422802
Alignment:
Q  58 aaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagg 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||   ||      |||||||||||    
T  14423043 aaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaag-----ataaattgagg 14422949  T
Q  158 gttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgct 257  Q
    ||||||||||||||| |||||||| | |||||||||| ||||||||||||| || || |||| ||||||| |||||||||||||||||| | |||||| |    
T  14422948 gttagggtttgatgatgattctgagg-ggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgtt 14422850  T
Q  258 gtgatcataaattgattgaaaattatgagtgattggatgaattgatgaa 306  Q
    |||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  14422849 gtgatcataaattgattg-aaattatgattgattggatgaattgatgaa 14422802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 62 - 306
Target Start/End: Complemental strand, 16009631 - 16009395
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggtta 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||| |||||| || ||      |||||| ||||||    
T  16009631 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatggttttggaagat------aaattgtgggtta 16009538  T
Q  162 gggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtga 261  Q
     |||||||||| |||||||| | |||||||||| ||||||||||||| || || |||| ||||||| |||||||||||||||||| |  ||||| |||||    
T  16009537 aggtttgatgatgattctgagg-ggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtga 16009439  T
Q  262 tcataaattgattgaaaattatgagtgattggatgaattgatgaa 306  Q
    ||||||| |||||| ||||||||| ||||||||||||||||||||    
T  16009438 tcataaactgattg-aaattatgattgattggatgaattgatgaa 16009395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 94; E-Value: 7e-46
Query Start/End: Original strand, 15 - 277
Target Start/End: Original strand, 12590596 - 12590851
Alignment:
Q  15 agaggagagcctagaac-cgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa 113  Q
    ||||||||||||||||  |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||    
T  12590596 agaggagagcctagaaatcgatccttgttgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aa 12590694  T
Q  114 attgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctct 213  Q
    ||||||||| | | ||||||||| |||||   ||||   |||  ||||||||||||||| ||||||||   |||||| |||| ||| |||||| |  |||    
T  12590695 attgacctaattgaatagttttggaaaat---aata---tgaaagttagggtttgatgatgattctga--tggaatgagtaaagatgatgttagttttct 12590786  T
Q  214 tataatataatgttcagaatgaaaacttaatctttgttgttgctgtgat-cataaattgattgaa 277  Q
    |  ||| ||||||| ||||||||| |||||||  |||||||||||| || ||| |||||||||||    
T  12590787 tggaatttaatgttaagaatgaaagcttaatccatgttgttgctgtaatccattaattgattgaa 12590851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 13 - 277
Target Start/End: Complemental strand, 13007536 - 13007280
Alignment:
Q  13 agagaggagagcctagaac-cgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctga 111  Q
    ||||||||||||||||||  |||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  13007536 agagaggagagcctagaaatcgatccttgttgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg- 13007438  T
Q  112 aaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcct 211  Q
    ||||||||||| | | |||||||||       |||||||  |||  ||||||||||||||| ||||||||   |||||| |||| ||| |||||| |  |    
T  13007437 aaattgacctaattgaatagttttg------gaaaataagatgaaagttagggtttgatgatgattctga--tggaatgagtaaagatgatgttagt-tt 13007347  T
Q  212 cttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgat-cataaattgattgaa 277  Q
    |||  ||| ||||||| |||| |||| |||||||  |||||||||||| || ||| |||||||||||    
T  13007346 cttggaatttaatgttaagaacgaaatcttaatccatgttgttgctgtaatccatgaattgattgaa 13007280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 64 - 264
Target Start/End: Complemental strand, 16677348 - 16677152
Alignment:
Q  64 aggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| | ||||||||||   ||  ||    ||||| |||||||||    
T  16677348 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagata----aaattaagggttagg 16677253  T
Q  164 gtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatc 263  Q
    ||||||||| |||| ||| |||||  | ||||||||||||||||   | || |||  | ||||||||||||||  | |||||| |  |||||||||||||    
T  16677252 gtttgatgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttgctgtgatc 16677153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 64 - 264
Target Start/End: Complemental strand, 17651584 - 17651388
Alignment:
Q  64 aggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| | ||||||||||   ||  ||    ||||| |||||||||    
T  17651584 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagata----aaattaagggttagg 17651489  T
Q  164 gtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatc 263  Q
    ||||||||| |||| ||| |||||  | ||||||||||||||||   | || |||  | ||||||||||||||  | |||||| |  |||||||||||||    
T  17651488 gtttgatgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttgctgtgatc 17651389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 117
Target Start/End: Original strand, 21230910 - 21231015
Alignment:
Q  13 agagaggagagcctag-aaccgattcttgctgtctaat-tttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg 110  Q
    |||||| ||||||||| |||||||| |||||||  ||| |||||||||| |||||||||||||||||||||||||||||||||||| | ||||||| |||    
T  21230910 agagagaagagcctaggaaccgatt-ttgctgtgcaatctttctgcaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctg 21231008  T
Q  111 aaaattg 117  Q
    |||||||    
T  21231009 aaaattg 21231015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 11382871 - 11382926
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattg 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  11382871 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11382926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 11389348 - 11389403
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattg 117  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  11389348 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11389403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 20311038 - 20311107
Alignment:
Q  50 tttctgcaaaa--ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattg 117  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||  ||||||| ||||||||||    
T  20311038 tttctgcaaaaatctaaggtaagggtgagactatctctcaataatcataacgtataatttctgaaaattg 20311107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 831628 - 831669
Alignment:
Q  56 caaaactaaggtaagggtgagactatctctcaataatcataa 97  Q
    ||||||||||||||||||||||||| ||||||||||| ||||    
T  831628 caaaactaaggtaagggtgagactaactctcaataattataa 831669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 97
Target Start/End: Original strand, 1196808 - 1196849
Alignment:
Q  56 caaaactaaggtaagggtgagactatctctcaataatcataa 97  Q
    ||||||||||||||||||||||||| ||||||||||| ||||    
T  1196808 caaaactaaggtaagggtgagactaactctcaataattataa 1196849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 56 - 97
Target Start/End: Complemental strand, 34958619 - 34958578
Alignment:
Q  56 caaaactaaggtaagggtgagactatctctcaataatcataa 97  Q
    ||||||||||||||||||||||||| ||||||||||| ||||    
T  34958619 caaaactaaggtaagggtgagactaactctcaataattataa 34958578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 13679548 - 13679492
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 118  Q
    |||||||||||||||||||||| ||||| ||||| || |||||||  ||||||||||    
T  13679548 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattga 13679492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 2971309 - 2971254
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| |||||||||    
T  2971309 ctaaggtaagggtgggattatctttcaatagtcataatttataatttctgaaaatt 2971254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 20906461 - 20906516
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| |||||||||    
T  20906461 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20906516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 92
Target Start/End: Complemental strand, 11311113 - 11311083
Alignment:
Q  62 taaggtaagggtgagactatctctcaataat 92  Q
    |||||||||||||||||||||||||||||||    
T  11311113 taaggtaagggtgagactatctctcaataat 11311083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 77
Target Start/End: Complemental strand, 14129244 - 14129216
Alignment:
Q  49 ttttctgcaaaactaaggtaagggtgaga 77  Q
    |||||||||||||||||||||||||||||    
T  14129244 ttttctgcaaaactaaggtaagggtgaga 14129216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 77
Target Start/End: Complemental strand, 14136090 - 14136062
Alignment:
Q  49 ttttctgcaaaactaaggtaagggtgaga 77  Q
    |||||||||||||||||||||||||||||    
T  14136090 ttttctgcaaaactaaggtaagggtgaga 14136062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 77
Target Start/End: Complemental strand, 14433062 - 14433034
Alignment:
Q  49 ttttctgcaaaactaaggtaagggtgaga 77  Q
    |||||||||||||||||||||||||||||    
T  14433062 ttttctgcaaaactaaggtaagggtgaga 14433034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 46626017 - 46625961
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 118  Q
    |||| |||||||||||||| |||||||| || ||||| ||||||| | |||||||||    
T  46626017 taagataagggtgagactaactctcaatgattataatatataatttcggaaaattga 46625961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 183; Significance: 5e-99; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 57 - 314
Target Start/End: Complemental strand, 22751201 - 22750950
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgag 156  Q
    ||||||||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||| | ||||||||||| || ||      ||||||||    
T  22751201 aaaactaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat------aaattgag 22751108  T
Q  157 ggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgc 256  Q
    |||||||||||||||| |||||||||| | |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| |||    
T  22751107 ggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgc 22751008  T
Q  257 tgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgta 314  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22751007 tgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgta 22750950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 51 - 306
Target Start/End: Original strand, 38144526 - 38144773
Alignment:
Q  51 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataa 150  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||| ||||| |||||      ||    
T  38144526 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcataattttggaaaat------aa 38144619  T
Q  151 attgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgt 250  Q
    |||||||||||||||||||||| |||||||| | |||||||||| ||||||||||||| || || |||| ||||||| |||||||||||||||||| |      
T  38144620 attgagggttagggtttgatgatgattctgagg-ggaatgggtattgatcatgttaattctattgtaatgtaatgtttagaatgaaaacttaatctatac 38144718  T
Q  251 tgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaa 306  Q
    ||||| ||||||||||||||||||| |||||| || ||||||||||||||||||||    
T  38144719 tgttgttgtgatcataaattgattg-aaattacgattgattggatgaattgatgaa 38144773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 62 - 306
Target Start/End: Original strand, 28370055 - 28370291
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggtta 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||| |||||      |||||||||||||    
T  28370055 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaat------aaattgagggtta 28370148  T
Q  162 gggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtga 261  Q
    ||||||||||| |||| ||| | |||||||||| ||||||||||||| || || |||  ||||||| |||||||||||||||||| |  ||||| |||||    
T  28370149 gggtttgatgatgattttgagg-ggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtga 28370247  T
Q  262 tcataaattgattgaaaattatgagtgattggatgaattgatgaa 306  Q
    |||||||||||||| ||||||||| |||| |||||||||||||||    
T  28370248 tcataaattgattg-aaattatgattgatgggatgaattgatgaa 28370291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 121; E-Value: 5e-62
Query Start/End: Original strand, 62 - 306
Target Start/End: Complemental strand, 19512441 - 19512204
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggtta 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||   ||      |||||||||||||||    
T  19512441 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaag-----ataaattgagggtta 19512347  T
Q  162 gggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtga 261  Q
    ||||||||||| |||| ||| | |||||||||| ||||||||||||| || || |||  ||||||| |||||||||||||||||| |  ||||| |||||    
T  19512346 gggtttgatgatgattttgagg-ggaatgggtattgatcatgttaattctattgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtga 19512248  T
Q  262 tcataaattgattgaaaattatgagtgattggatgaattgatgaa 306  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||    
T  19512247 tcataaattgattg-aaattatgattgattggatgaattgatgaa 19512204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 57 - 277
Target Start/End: Complemental strand, 23528690 - 23528478
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgag 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| | | |||||||||       |||||||  |||     
T  23528690 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttg------gaaaataagatgaa 23528598  T
Q  157 ggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgc 256  Q
     ||||||||||||||| ||||||||   |||||| |||| ||| |||||| |  ||||  ||| ||||||| |||| |||| |||||||  |||||||||    
T  23528597 agttagggtttgatgatgattctga--tggaatgagtaaggatgatgttagttttcttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 23528500  T
Q  257 tgtgat-cataaattgattgaa 277  Q
    ||| || ||| |||||||||||    
T  23528499 tgtaatccatgaattgattgaa 23528478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 22438735 - 22438803
Alignment:
Q  50 tttctgcaaaa-ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattg 117  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  22438735 tttctgcaaaatctaaggtaagggtgagactatctctcaataatcataatgtataatttctgaaaattg 22438803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 18407944 - 18408000
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 118  Q
    ||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||    
T  18407944 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattga 18408000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 23111200 - 23111256
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 118  Q
    ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||    
T  23111200 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattga 23111256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 19236955 - 19236900
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| |||||||||    
T  19236955 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 19236900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 117
Target Start/End: Complemental strand, 42961632 - 42961566
Alignment:
Q  51 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattg 117  Q
    |||||||||||||||||||||||||| ||| |  ||||| || ||||| ||| ||| ||||||||||    
T  42961632 ttctgcaaaactaaggtaagggtgaggctaaccttcaatgattataatatatgatttctgaaaattg 42961566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 90
Target Start/End: Original strand, 17021913 - 17021942
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaata 90  Q
    ||||||||||||||||||||||||||||||    
T  17021913 ctaaggtaagggtgagactatctctcaata 17021942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 22461211 - 22461158
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaa 114  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| |||||||    
T  22461211 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22461158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 61 - 114
Target Start/End: Complemental strand, 22467835 - 22467782
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaa 114  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| |||||||    
T  22467835 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22467782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 183; Significance: 5e-99; HSPs: 20)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 183; E-Value: 5e-99
Query Start/End: Original strand, 49 - 314
Target Start/End: Original strand, 14762745 - 14763004
Alignment:
Q  49 ttttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaat 148  Q
    |||||| | ||| ||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| | ||||||||||| || ||          
T  14762745 ttttcttctaaattaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat------ 14762838  T
Q  149 aaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatcttt 248  Q
    |||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||    
T  14762839 aaattgagggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatcttt 14762938  T
Q  249 gttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgta 314  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14762939 gttgctgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgta 14763004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 64 - 314
Target Start/End: Original strand, 38310802 - 38311046
Alignment:
Q  64 aggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagg 163  Q
    ||||||||||||||||||||||| ||||||||||||||||||| ||||| ||||||||| | ||||||||||| || ||      |||||||||||||||    
T  38310802 aggtaagggtgagactatctctcgataatcataatctataatttctgaatattgacctaattgcatagttttggaagat------aaattgagggttagg 38310895  T
Q  164 gtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatc 263  Q
    ||||||||| |||||||||| | |||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  38310896 gtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatc 38310995  T
Q  264 ataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgta 314  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  38310996 ataaattgattgaaaattatgagtgattggatgaatggatgaatttgtgta 38311046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 166; E-Value: 8e-89
Query Start/End: Original strand, 64 - 300
Target Start/End: Original strand, 20247791 - 20248021
Alignment:
Q  64 aggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||| || ||      |||||||||||||||    
T  20247791 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat------aaattgagggttagg 20247884  T
Q  164 gtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatc 263  Q
    ||||||||| |||||||||| | ||||||||||||||||||||||  |||| ||||||||||||||||||||||||||||||||||||| ||||||||||    
T  20247885 gtttgatgatgattctgaagggaaatgggtaatgatcatgttaattttcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatc 20247984  T
Q  264 ataaattgattgaaaattatgagtgattggatgaatt 300  Q
    |||||||||||||||||||||||||||||||||||||    
T  20247985 ataaattgattgaaaattatgagtgattggatgaatt 20248021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 62 - 306
Target Start/End: Complemental strand, 9534382 - 9534146
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggtta 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||| |||||      |||||||||||||    
T  9534382 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaat------aaattgagggtta 9534289  T
Q  162 gggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtga 261  Q
    ||||||||||| |||||||| | |||||||||| ||||||||||||| || || |||| ||||||| |||||||||||||||||| |  |||||  ||||    
T  9534288 gggtttgatgatgattctga-gtggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgtcgtga 9534190  T
Q  262 tcataaattgattgaaaattatgagtgattggatgaattgatgaa 306  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||    
T  9534189 tcataaattgattg-aaattatgattgattggatgaattgatgaa 9534146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 64 - 307
Target Start/End: Complemental strand, 24193009 - 24192771
Alignment:
Q  64 aggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||   ||      |||||||||||||||||    
T  24193009 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaag-----ataaattgagggttagg 24192915  T
Q  164 gtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtg-at 262  Q
    ||||||||| |||||||||| | |||||||||||||||||||||| || || |||| | |||||||||||||||||||||||| || |||||||||| ||    
T  24192914 gtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttcagaatgaaaacttaatctatgctgttgctgtgaat 24192815  T
Q  263 cataaattgattgaaaattatgagtgattggatgaattgatgaat 307  Q
    |||||| |||||||||| ||||| ||||||||| |||||||||||    
T  24192814 cataaactgattgaaaa-tatgattgattggataaattgatgaat 24192771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 61 - 306
Target Start/End: Original strand, 23370505 - 23370743
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggtt 160  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||   ||      |||||||| |||||    
T  23370505 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaag-----ataaattgtgggtt 23370599  T
Q  161 agggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtg 260  Q
    |||||||||||| |||||||| | |||||||||| ||||||||||||| || || |||| ||||||| |||||||||||||||||| |  ||||| ||||    
T  23370600 agggtttgatgatgattctgagg-ggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtg 23370698  T
Q  261 atcataaattgattgaaaattatgagtgattggatgaattgatgaa 306  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||    
T  23370699 atcataaattgattg-aaattatgattgattggatgaattgatgaa 23370743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 13 - 142
Target Start/End: Original strand, 41455048 - 41455177
Alignment:
Q  13 agagaggagagcctagaac-cgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctga 111  Q
    |||||||| |||||||||  |||| |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  41455048 agagaggaaagcctagaaatcgatccttgttgtctaactttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg- 41455146  T
Q  112 aaattgacctagtggcatagttttgaaaaat 142  Q
    ||||||||||| | | ||||||||| |||||    
T  41455147 aaattgacctaattgaatagttttggaaaat 41455177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 149 - 303
Target Start/End: Original strand, 55499185 - 55499337
Alignment:
Q  149 aaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatcttt 248  Q
    |||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||  | || |||| | |||||| |||||||| |||||||| |    
T  55499185 aaattgagggttagggtttgatgatgattctgagg-ggaatgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctat 55499283  T
Q  249 gttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgat 303  Q
       |||||||||||||||||||||||||||| ||| | |||||||||||||||||    
T  55499284 acagttgctgtgatcataaattgattgaaaa-tataattgattggatgaattgat 55499337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 51 - 121
Target Start/End: Original strand, 16801457 - 16801526
Alignment:
Q  51 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacct 121  Q
    ||||||||||||||||||||||||||||||||||||||||||||| || ||||||| ||||||||||||||    
T  16801457 ttctgcaaaactaaggtaagggtgagactatctctcaataatcat-atatataatttctgaaaattgacct 16801526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 258
Target Start/End: Original strand, 24933828 - 24934016
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggtt 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| | | ||||||||| |||||   ||||   |||   ||    
T  24933828 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaat---aata---tgaaaatt 24933920  T
Q  161 agggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctg 258  Q
    |||||||||||| ||||||||   |||||| |||| ||| |||||| |  |||   ||| ||||||| ||||||||| |||||||  |||||||||||    
T  24933921 agggtttgatgatgattctga--tggaatgagtaaagatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatccatgttgttgctg 24934016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 18929300 - 18929244
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 118  Q
    |||||||||||||||||||||||||||||||||| || ||||||| |||||||||||    
T  18929300 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattga 18929244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 17240513 - 17240569
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 118  Q
    |||||||||||||||||||||||||||||||| ||||  |||||| |||||||||||    
T  17240513 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattga 17240569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 13302240 - 13302295
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 116  Q
    ||||||||||||||||| ||||| |||||||||||||| | ||||| |||||||||    
T  13302240 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13302295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 13323787 - 13323842
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 116  Q
    ||||||||||||||||| ||||| |||||||||||||| | ||||| |||||||||    
T  13323787 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13323842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 12033444 - 12033499
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| |||||||||    
T  12033444 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 12033499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 13312896 - 13312951
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 116  Q
    ||||||||||||||||| ||||| |||||||||||||| | |||||  ||||||||    
T  13312896 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttttgaaaatt 13312951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 17131787 - 17131732
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| |||||||||    
T  17131787 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 17131732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 96
Target Start/End: Original strand, 23392819 - 23392854
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcata 96  Q
    |||||||||||||||||||| |||||||||||||||    
T  23392819 ctaaggtaagggtgagactaactctcaataatcata 23392854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 51301644 - 51301589
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 116  Q
    ||||||||||||||||| |||||  ||||||||||||| | ||||| |||||||||    
T  51301644 ctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 51301589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 61 - 97
Target Start/End: Original strand, 2247649 - 2247685
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataa 97  Q
    |||||||||||||||||||| ||||||||||| ||||    
T  2247649 ctaaggtaagggtgagactaactctcaataattataa 2247685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 180; Significance: 3e-97; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 21 - 278
Target Start/End: Complemental strand, 111978 - 111726
Alignment:
Q  21 gagcctagaaccgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaa-ttgac 119  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||    
T  111978 gagcctagaaccgatccttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaaattgac 111879  T
Q  120 ctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataat 219  Q
    ||| | ||||||||||| || ||      |||||||||||||||||||||||| |||||||||| | |||||||||||||||||||||| ||||| ||||    
T  111878 ctaattgcatagttttggaagat------aaattgagggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaat 111785  T
Q  220 ataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaa 278  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  111784 ataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaattgattgaaa 111726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 163; Significance: 5e-87; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 163; E-Value: 5e-87
Query Start/End: Original strand, 19 - 314
Target Start/End: Original strand, 1856 - 2143
Alignment:
Q  19 gagagcctagaaccgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaa-ttg 117  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||    
T  1856 gagagcctagaaccgatccttgctgtctaattt-ctgcaaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattg 1954  T
Q  118 acctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttata 217  Q
    ||||| | | ||||||||| |||||      || ||||||||||||||||||||| |||| ||| |  |||||||||||||| |||||||| ||||| ||    
T  1955 acctaattgtatagttttggaaaat------aatttgagggttagggtttgatgatgattttgatg--gaatgggtaatgattatgttaattctcttgta 2046  T
Q  218 atataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgta 314  Q
    || ||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||| | ||||||||||| |||||||||||||||||||||    
T  2047 atttaatgttcataatgaaaacttaatccttgttgttgctgtgatcataacttgattgaaattgatgagtgattgtatgaattgatgaatttgtgta 2143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 19 - 314
Target Start/End: Original strand, 8533 - 8820
Alignment:
Q  19 gagagcctagaaccgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaa-ttg 117  Q
    ||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| |||    
T  8533 gagagcctagaaccgatccttgctgtctaattt-ctgcaaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattg 8631  T
Q  118 acctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttata 217  Q
    ||||| | | ||||||||| |||||      || ||||||||||||||||||||| |||| ||| |  |||||||||||||| |||||||| ||||| ||    
T  8632 acctaattgtatagttttggaaaat------aatttgagggttagggtttgatgatgattatgatg--gaatgggtaatgattatgttaattctcttgta 8723  T
Q  218 atataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgta 314  Q
    || ||||||||| ||||||||||||||| ||||||||||||||||||||| |||||||||| | || |||||||| |||||||||||||||||||||    
T  8724 atttaatgttcaaaatgaaaacttaatccttgttgttgctgtgatcataacttgattgaaattgataagtgattgtatgaattgatgaatttgtgta 8820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 161; Significance: 7e-86; HSPs: 16)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 21 - 314
Target Start/End: Complemental strand, 23866709 - 23866423
Alignment:
Q  21 gagcctagaaccgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacc 120  Q
    ||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||    
T  23866709 gagcctagaaccgatccttgctgtctaattt-ctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacc 23866612  T
Q  121 tagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcct-cttataat 219  Q
    || | ||||||||||| |||||      |||||||||||||||||||||||| |||| ||||||| |||||||||||||||||||||| ||  || ||||    
T  23866611 taattgcatagttttggaaaat------aaattgagggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaat 23866518  T
Q  220 ataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattga-ttgaaaattatgagtgattggatgaattgatgaatttgtgta 314  Q
    ||||||||||||||  |||||||||| ||||||||||| ||||| |||| ||| ||| || |||||||||||||||||||||||||||||||||||    
T  23866517 ataatgttcagaatataaacttaatc-ttgttgttgctctgatcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgta 23866423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 64 - 314
Target Start/End: Original strand, 8727735 - 8727979
Alignment:
Q  64 aggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagg 163  Q
    |||||||||||||| |||| ||||||||||||||||||||||| ||||||||||||||| | ||||||||||   ||      |||||||||||||||||    
T  8727735 aggtaagggtgagattatccctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaag-----ataaattgagggttagg 8727829  T
Q  164 gtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatc 263  Q
    |||||| || |||||||| | || ||||||| ||||||||||||| || || |||| |||||||||||||||||||||||||| |  ||||| |||||||    
T  8727830 gtttgacgatgattctgagg-ggtatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatc 8727928  T
Q  264 ataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgta 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8727929 ataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgta 8727979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 61 - 306
Target Start/End: Complemental strand, 44477678 - 44477441
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggtt 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||| |||||      ||||||||||||    
T  44477678 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaat------aaattgagggtt 44477585  T
Q  161 agggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtg 260  Q
    |||||||||||| |||| ||| | |||||||||| ||||||||||||| || || |||  ||||||| |||||||||||||||||| |  ||||| ||||    
T  44477584 agggtttgatgatgattttgagg-ggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtg 44477486  T
Q  261 atcataaattgattgaaaattatgagtgattggatgaattgatgaa 306  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||    
T  44477485 atcataaattgattg-aaattatgattgattggatgaattgatgaa 44477441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 61 - 306
Target Start/End: Complemental strand, 44492836 - 44492599
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggtt 160  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||| |||||      ||||||||||||    
T  44492836 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaat------aaattgagggtt 44492743  T
Q  161 agggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtg 260  Q
    |||||||||||| |||| ||| | |||||||||| ||||||||||||| || || |||  ||||||| |||||||||||||||||| |  ||||| ||||    
T  44492742 agggtttgatgatgattttgagg-ggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtg 44492644  T
Q  261 atcataaattgattgaaaattatgagtgattggatgaattgatgaa 306  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||    
T  44492643 atcataaattgattg-aaattatgattgattggatgaattgatgaa 44492599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 159 - 306
Target Start/End: Original strand, 27940946 - 27941091
Alignment:
Q  159 ttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctg 258  Q
    |||||||||||||| |||||||| | |||||||||| ||||||||||||| || || |||| |||||||||||||||||| ||||||| |  ||||| |     
T  27940946 ttagggtttgatgatgattctgagg-ggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaatttaatctatactgttgtta 27941044  T
Q  259 tgatcataaattgattgaaaattatgagtgattggatgaattgatgaa 306  Q
    ||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  27941045 tgatcataaattgattg-aaattatgattgattggatgaattgatgaa 27941091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 13 - 277
Target Start/End: Complemental strand, 17054694 - 17054439
Alignment:
Q  13 agagaggagagcctagaac-cgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctga 111  Q
    |||||| |||||||||||  ||||  |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||     
T  17054694 agagagtagagcctagaaatcgatcattgctgtctaattt-ctgcaaaaccaaggtaagggtgagactatctctcaataatcataatctataattcctg- 17054597  T
Q  112 aaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcct 211  Q
    ||||||||||| | | |||||||||       |||||||  |||  ||||||||||||||| ||||||||   |||||| |||| ||| |||||| |  |    
T  17054596 aaattgacctaattgaatagttttg------gaaaataagatgaaagttagggtttgatgatgattctga--tggaatgagtaaagatgatgttagt-tt 17054506  T
Q  212 cttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgat-cataaattgattgaa 277  Q
    |||  ||| ||||||| |||| |||| |||||||  |||||||||||| || ||| |||||||||||    
T  17054505 cttggaatttaatgttaagaacgaaatcttaatccatgttgttgctgtaatccatgaattgattgaa 17054439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 18614340 - 18614271
Alignment:
Q  49 ttttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 118  Q
    |||||| | ||| |||||||||||||||||||||||||||||||||| || ||||||| |||||||||||    
T  18614340 ttttcttctaaattaaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattga 18614271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 23482053 - 23482109
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 118  Q
    ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||    
T  23482053 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattga 23482109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 117
Target Start/End: Original strand, 14056552 - 14056619
Alignment:
Q  50 tttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattg 117  Q
    |||||||||| |||||||||||||||||||||||||||||||| ||| | | ||| | ||||||||||    
T  14056552 tttctgcaaatctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 14056619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 39364975 - 39364919
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 118  Q
    ||||||||||||||||||||||||||||||| ||| | || |||| |||||||||||    
T  39364975 taaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 39364919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 25112043 - 25111976
Alignment:
Q  50 tttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattg 117  Q
    ||||| |||| |||||||||||||||||||||||||||||||| ||| | | ||| | ||||||||||    
T  25112043 tttctacaaatctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 25111976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 49 - 116
Target Start/End: Original strand, 29643373 - 29643440
Alignment:
Q  49 ttttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 116  Q
    |||||| | ||| |||||||||||||||| ||||| |||||||||||||| | ||||| |||||||||    
T  29643373 ttttcttctaaattaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 29643440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 24320670 - 24320725
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| |||||||||    
T  24320670 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 24320725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 51 - 117
Target Start/End: Original strand, 27940841 - 27940907
Alignment:
Q  51 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattg 117  Q
    |||||||||||||||||||||||||| ||| |  ||||| || ||||| ||| ||| ||||||||||    
T  27940841 ttctgcaaaactaaggtaagggtgaggctaaccttcaatgattataatatatgatttctgaaaattg 27940907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 21931752 - 21931696
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 118  Q
    ||||||||||||||| ||| |||||||| || ||||| ||||| | |||||||||||    
T  21931752 taaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 21931696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 82
Target Start/End: Original strand, 44474690 - 44474722
Alignment:
Q  50 tttctgcaaaactaaggtaagggtgagactatc 82  Q
    ||||||||||| |||||||||||||||||||||    
T  44474690 tttctgcaaaattaaggtaagggtgagactatc 44474722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 156; Significance: 7e-83; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 156; E-Value: 7e-83
Query Start/End: Original strand, 13 - 307
Target Start/End: Complemental strand, 394 - 109
Alignment:
Q  13 agagaggagagcctagaaccgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaa 112  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| |    
T  394 agagaggagagcctagaaccgatccttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataaccataatctataatttctg-a 296  T
Q  113 aattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctc 212  Q
    |||||||||| | |||||||||||       ||||||||||||||||||||||||||||| ||||||| || ||||||||||||||||||||||||  ||    
T  295 aattgacctaattgcatagttttg------gaaaataaattgagggttagggtttgatgatgattctg-aggggaatgggtaatgatcatgttaattttc 203  T
Q  213 ttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaat 307  Q
    || || |||  |||||||| |||| ||||||||| |||| ||| ||||||||||||||| ||| ||||||||| || |||||| |||||||||||    
T  202 ttgtattatggtgttcagattgaagacttaatctatgttattgatgtgatcataaattggttg-aaattatgattggttggataaattgatgaat 109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 64 - 307
Target Start/End: Original strand, 14398 - 14635
Alignment:
Q  64 aggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagg 163  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||   ||      |||||||||||||||||    
T  14398 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaag-----ataaattgagggttagg 14492  T
Q  164 gtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatc 263  Q
    ||||||||| |||||||||| | |||||||||||||||||||||| || || |||| | |||||| ||||||||||||||||| || |||||||||||||    
T  14493 gtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttccgaatgaaaacttaatctatgctgttgctgtgatc 14592  T
Q  264 ataaattgattgaaaattatgagtgattggatgaattgatgaat 307  Q
    ||||| |||||||||| ||||| ||||||||| |||||||||||    
T  14593 ataaactgattgaaaa-tatgattgattggataaattgatgaat 14635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 131; Significance: 6e-68; HSPs: 19)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 49 - 306
Target Start/End: Original strand, 19661441 - 19661690
Alignment:
Q  49 ttttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaat 148  Q
    |||||| | ||| |||||||||||||||||| |||||| ||||||||||||||||||| ||||||||||||||| | ||||||||||| || ||          
T  19661441 ttttcttctaaattaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat------ 19661534  T
Q  149 aaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatcttt 248  Q
    |||||||||||||||||||||||| |||||||| | |||||||||| ||||||||||||| || || |||| ||||||| |||||||||||||||||| |    
T  19661535 aaattgagggttagggtttgatgatgattctgagg-ggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctat 19661633  T
Q  249 gttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaa 306  Q
     |||||| ||||||||||||||||||| ||||||||| ||||||||||||||||||||    
T  19661634 attgttgttgtgatcataaattgattg-aaattatgattgattggatgaattgatgaa 19661690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 62 - 306
Target Start/End: Complemental strand, 6483772 - 6483536
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggtta 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||| |||||      |||||||||||||    
T  6483772 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaat------aaattgagggtta 6483679  T
Q  162 gggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtga 261  Q
    ||||||||||| |||| ||| | |||||||||| ||||||||||||| || || |||  ||||||| |||||||||||||||||| |  ||||| |||||    
T  6483678 gggtttgatgatgattttgagg-ggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtga 6483580  T
Q  262 tcataaattgattgaaaattatgagtgattggatgaattgatgaa 306  Q
    |||||||||||||| ||||||||| |||| |||||||||||||||    
T  6483579 tcataaattgattg-aaattatgattgatgggatgaattgatgaa 6483536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 62 - 306
Target Start/End: Complemental strand, 6487239 - 6487003
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggtta 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||| |||||      |||||||||||||    
T  6487239 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaat------aaattgagggtta 6487146  T
Q  162 gggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtga 261  Q
    ||||||||||| |||| ||| | |||||||||| ||||||||||||| || || |||  ||||||| |||||||||||||||||| |  ||||| |||||    
T  6487145 gggtttgatgatgattttgagg-ggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtga 6487047  T
Q  262 tcataaattgattgaaaattatgagtgattggatgaattgatgaa 306  Q
    |||||||||||||| ||||||||| |||| |||||||||||||||    
T  6487046 tcataaattgattg-aaattatgattgatgggatgaattgatgaa 6487003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 13 - 264
Target Start/End: Complemental strand, 26583931 - 26583687
Alignment:
Q  13 agagaggagagccta-gaaccgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctga 111  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  26583931 agagaggagagcctaagaaccgatccttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg- 26583833  T
Q  112 aaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcct 211  Q
    ||||||||||| | |||||||||||       ||||||||||||||||||||| ||||||| ||||||| || |||| ||||||||||||||||||   |    
T  26583832 aaattgacctaattgcatagttttg------gaaaataaattgagggttagggcttgatgatgattctg-aggggaaagggtaatgatcatgttaaatat 26583740  T
Q  212 cttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatca 264  Q
     || |||  | ||||||||||||||  | |||||| |  ||||||||||||||    
T  26583739 gttgtaaagtgatgttcagaatgaattcctaatctataatgttgctgtgatca 26583687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 149 - 306
Target Start/End: Original strand, 23089137 - 23089292
Alignment:
Q  149 aaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatcttt 248  Q
    |||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||  | || |||| | | |||| |||||||| |||||||| |    
T  23089137 aaattgagggttagggtttgatgatgattct-aaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctat 23089235  T
Q  249 gttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaa 306  Q
      ||||||||||||||||||||||||||||| ||| | ||||||||||||||||||||    
T  23089236 actgttgctgtgatcataaattgattgaaaa-tataattgattggatgaattgatgaa 23089292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 149 - 306
Target Start/End: Original strand, 23101545 - 23101700
Alignment:
Q  149 aaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatcttt 248  Q
    |||||||||||||||||||||||| |||||||| | ||||||||||||||||||||||||  | || |||| | | |||| |||||||| |||||||| |    
T  23101545 aaattgagggttagggtttgatgatgattctgagg-ggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctat 23101643  T
Q  249 gttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaa 306  Q
      ||||| ||||||||||||||||||||||| ||| | |||||||||||||| |||||    
T  23101644 actgttgttgtgatcataaattgattgaaaa-tataattgattggatgaattcatgaa 23101700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 148 - 306
Target Start/End: Complemental strand, 23878982 - 23878826
Alignment:
Q  148 taaattgagggttagggtttgatgacgattctgaagaggaatggg-taatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatct 246  Q
    ||||||||||||||||||| | ||| |||||||| | |||||||| ||||||||||||||||  | || |||| | ||||||||||||||| ||||||||    
T  23878982 taaattgagggttagggtt-gttgatgattctgagg-ggaatggggtaatgatcatgttaattatgttgtaatgtgatgttcagaatgaaatcttaatct 23878885  T
Q  247 ttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaa 306  Q
     |  ||||| ||||||||||||||||||||||| ||  | ||||||||||||||||||||    
T  23878884 atactgttgttgtgatcataaattgattgaaaa-tagaattgattggatgaattgatgaa 23878826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 61 - 135
Target Start/End: Original strand, 5706023 - 5706096
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagtttt 135  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||| | | ||||||||    
T  5706023 ctaaggtaagggtgagactatctctcattaatcataatctataattcctg-aaattgacctaattgaatagtttt 5706096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 21908414 - 21908358
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 118  Q
    |||||||||||||||||||||||||||||||||| || ||||||| |||||||||||    
T  21908414 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattga 21908358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 23265197 - 23265141
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 118  Q
    ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||    
T  23265197 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattga 23265141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 23280265 - 23280209
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 118  Q
    ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||    
T  23280265 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattga 23280209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 24661632 - 24661576
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 118  Q
    ||||||||||||||| ||| ||||| || |||||||| ||||||| |||||||||||    
T  24661632 taaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 24661576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 10632 - 10577
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| |||||||||    
T  10632 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 10577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 25180929 - 25180984
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| |||||||||    
T  25180929 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 25180984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 64 - 122
Target Start/End: Complemental strand, 23879060 - 23879002
Alignment:
Q  64 aggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgaccta 122  Q
    |||||||||||||||||||||||| |||| || || ||||||| |  ||||||||||||    
T  23879060 aggtaagggtgagactatctctcattaataattatatataatttcgaaaaattgaccta 23879002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 62 - 122
Target Start/End: Original strand, 23101463 - 23101524
Alignment:
Q  62 taaggtaagggtgagactatctctcaataat-cataatctataattcctgaaaattgaccta 122  Q
    |||||||||||||||||||||||||| ||||  ||||| | ||||| | |||||||||||||    
T  23101463 taaggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgaccta 23101524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 52 - 133
Target Start/End: Complemental strand, 26885246 - 26885166
Alignment:
Q  52 tctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagtt 133  Q
    |||||||  |||||||||||||| || ||||| ||||||||| |||| ||||||| ||||||||| | ||| ||| ||||||    
T  26885246 tctgcaattctaaggtaagggtgggattatctttcaataatc-taatgtataatttctgaaaattaatctaatggaatagtt 26885166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 23168287 - 23168351
Alignment:
Q  50 tttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaa 114  Q
    |||||||||  |||||||||||||| || ||||| ||| | |||||||| ||||||| |||||||    
T  23168287 tttctgcaattctaaggtaagggtgggattatctttcattgatcataatgtataatttctgaaaa 23168351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 114
Target Start/End: Original strand, 23579544 - 23579608
Alignment:
Q  50 tttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaa 114  Q
    |||||||||  |||||||||||||| || ||||| ||| | |||||||| ||||||| |||||||    
T  23579544 tttctgcaattctaaggtaagggtgggattatctttcattgatcataatgtataatttctgaaaa 23579608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 129; Significance: 9e-67; HSPs: 18)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 129; E-Value: 9e-67
Query Start/End: Original strand, 62 - 306
Target Start/End: Original strand, 20437024 - 20437261
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggtta 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||   ||      |||||||||||||||    
T  20437024 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaag-----ataaattgagggtta 20437118  T
Q  162 gggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtga 261  Q
    ||||||||||| |||||||| | |||||||||| |||||||||||||  | || |||| |||||||||||||||||||||||||| |  ||||| |||||    
T  20437119 gggtttgatgatgattctgagg-ggaatgggtattgatcatgttaattatgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtga 20437217  T
Q  262 tcataaattgattgaaaattatgagtgattggatgaattgatgaa 306  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||    
T  20437218 tcataaattgattg-aaattatgattgattggatgaattgatgaa 20437261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 13 - 142
Target Start/End: Complemental strand, 41112139 - 41112010
Alignment:
Q  13 agagaggagagcctagaac-cgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctga 111  Q
    ||||||||||||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||     
T  41112139 agagaggagagcctagaaatcgatccttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg- 41112041  T
Q  112 aaattgacctagtggcatagttttgaaaaat 142  Q
    ||||||||||| | | |||||||||||||||    
T  41112040 aaattgacctaattgaatagttttgaaaaat 41112010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 32651640 - 32651571
Alignment:
Q  49 ttttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 118  Q
    |||||| | ||| ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||    
T  32651640 ttttcttctaaattaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattga 32651571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 18712854 - 18712798
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 118  Q
    ||||||| ||||||||||||||||||||||||||| | ||||||| |||||||||||    
T  18712854 taaggtatgggtgagactatctctcaataatcatagtatataatttctgaaaattga 18712798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 19663517 - 19663572
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattg 117  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||| ||||||||||    
T  19663517 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 19663572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 20805376 - 20805320
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 118  Q
    ||||||||||||||| ||| |||||||| |||||||| ||||||| |||||||||||    
T  20805376 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 20805320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 117
Target Start/End: Complemental strand, 11158148 - 11158093
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattg 117  Q
    ||||||||||||||||||| |||||||| ||| |||| ||||||| ||||||||||    
T  11158148 taaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 11158093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 64 - 118
Target Start/End: Original strand, 10811785 - 10811839
Alignment:
Q  64 aggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 118  Q
    ||||||||||||||||||||||||||||| ||| | || |||| |||||||||||    
T  10811785 aggtaagggtgagactatctctcaataataatagtgtagaatttctgaaaattga 10811839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 20851132 - 20851187
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| |||||||||    
T  20851132 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20851187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 116
Target Start/End: Original strand, 20857759 - 20857814
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| |||||||||    
T  20857759 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20857814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 21706331 - 21706276
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| |||||||||    
T  21706331 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21706276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 21710873 - 21710818
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| |||||||||    
T  21710873 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21710818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 92
Target Start/End: Complemental strand, 24476380 - 24476350
Alignment:
Q  62 taaggtaagggtgagactatctctcaataat 92  Q
    |||||||||||||||||||||||||||||||    
T  24476380 taaggtaagggtgagactatctctcaataat 24476350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 92
Target Start/End: Original strand, 25091418 - 25091448
Alignment:
Q  62 taaggtaagggtgagactatctctcaataat 92  Q
    |||||||||||||||||||||||||||||||    
T  25091418 taaggtaagggtgagactatctctcaataat 25091448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 96
Target Start/End: Complemental strand, 18271371 - 18271338
Alignment:
Q  63 aaggtaagggtgagactatctctcaataatcata 96  Q
    |||||||||||||||||| |||||||||||||||    
T  18271371 aaggtaagggtgagactaactctcaataatcata 18271338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 96
Target Start/End: Complemental strand, 18276025 - 18275992
Alignment:
Q  63 aaggtaagggtgagactatctctcaataatcata 96  Q
    |||||||||||||||||| |||||||||||||||    
T  18276025 aaggtaagggtgagactaactctcaataatcata 18275992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 11946504 - 11946472
Alignment:
Q  50 tttctgcaaaactaaggtaagggtgagactatc 82  Q
    ||||||||||| |||||||||||||||||||||    
T  11946504 tttctgcaaaattaaggtaagggtgagactatc 11946472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 49 - 77
Target Start/End: Complemental strand, 21665205 - 21665177
Alignment:
Q  49 ttttctgcaaaactaaggtaagggtgaga 77  Q
    |||||||||||||||||||||||||||||    
T  21665205 ttttctgcaaaactaaggtaagggtgaga 21665177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 128; Significance: 4e-66; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 13 - 306
Target Start/End: Complemental strand, 11446 - 11159
Alignment:
Q  13 agagaggagagcctag-aaccgattcttgctgtctaatt-ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg 110  Q
    |||||| ||||||||| |||||||| ||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  11446 agagagaagagcctaggaaccgatt-ttgctgtgtaatccttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg 11348  T
Q  111 aaaattgacctagtggcatagttttgaaaaattaaaataaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcc 210  Q
    |||||||||||| | || |||||||| |||||       ||||||||||||||||||||||| ||||||| || |||||| ||||||||||||||||| |    
T  11347 aaaattgacctaattgcttagttttggaaaat-----agaattgagggttagggtttgatgatgattctggag-ggaatgagtaatgatcatgttaattc 11254  T
Q  211 tcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaa 306  Q
    | || |||| | ||||||| ||||||| |||||||  |  |||||||||||||| |||||||||||||| ||| | ||||||||||||||||||||    
T  11253 tgttgtaatgtgatgttcaaaatgaaatcttaatccatactgttgctgtgatcacaaattgattgaaaa-tataattgattggatgaattgatgaa 11159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 61 - 306
Target Start/End: Original strand, 10195 - 10433
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggtt 160  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||   ||      |||||||| |||||    
T  10195 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaag-----ataaattgtgggtt 10289  T
Q  161 agggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtg 260  Q
    |||||||||||| |||||||| | |||||||||| ||||||||||||| || || |||| ||||||| |||||||||||||||||| |  ||||| ||||    
T  10290 agggtttgatgatgattctgagg-ggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtg 10388  T
Q  261 atcataaattgattgaaaattatgagtgattggatgaattgatgaa 306  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||    
T  10389 atcataaattgattg-aaattatgattgattggatgaattgatgaa 10433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 122; Significance: 1e-62; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 122; E-Value: 1e-62
Query Start/End: Original strand, 61 - 306
Target Start/End: Original strand, 1525 - 1763
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattgagggtt 160  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| | ||||||||||   ||      |||||||| |||||    
T  1525 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaag-----ataaattgtgggtt 1619  T
Q  161 agggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttgctgtg 260  Q
    |||||||||||| |||||||| | |||||||||| ||||||||||||| || || |||| ||||||| |||||||||||||||||| |  ||||| ||||    
T  1620 agggtttgatgatgattctgagg-ggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtg 1718  T
Q  261 atcataaattgattgaaaattatgagtgattggatgaattgatgaa 306  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||    
T  1719 atcataaattgattg-aaattatgattgattggatgaattgatgaa 1763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 98; Significance: 3e-48; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 51 - 307
Target Start/End: Complemental strand, 18235 - 17985
Alignment:
Q  51 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataa 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||| | || ||| |||     |  |||||||    
T  18235 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcttagcttt-----aggaaaataa 18141  T
Q  151 attgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcct-cttataatataatgttcagaatgaaaacttaatctttg 249  Q
    ||||||||||| ||||| |||| |||||| ||  ||||  ||||||| |||||||||| ||  || |||| | |||| |||||||||||||||| || ||    
T  18140 attgagggttaaggtttaatgatgattct-aacgggaaatggtaatggtcatgttaattctgtttgtaatgtgatgtccagaatgaaaacttaacctatg 18042  T
Q  250 ttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaat 307  Q
    |||||||||||||||| ||||||||| |||||  || ||||||||| |||||||||||    
T  18041 ttgttgctgtgatcatgaattgattg-aaatttggattgattggataaattgatgaat 17985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 80; Significance: 2e-37; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 227 - 314
Target Start/End: Complemental strand, 3558 - 3471
Alignment:
Q  227 tcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgta 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||    
T  3558 tcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaatttatgggtgattggatgaattgatgaatttgtgta 3471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 78; Significance: 2e-36; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 13 - 136
Target Start/End: Complemental strand, 30962 - 30838
Alignment:
Q  13 agagaggagagcctag-aaccgattcttgctgtctaatt-ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg 110  Q
    |||||||||||||||| || ||||| ||||||| ||||  |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  30962 agagaggagagcctaggaatcgatt-ttgctgtgtaatccttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg 30864  T
Q  111 aaaattgacctagtggcatagttttg 136  Q
    |||||||||||| | |||||||||||    
T  30863 aaaattgacctaattgcatagttttg 30838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 149 - 306
Target Start/End: Original strand, 3375 - 3531
Alignment:
Q  149 aaattgagggttagggtttgatgacgattctgaagaggaatgggtaatga-tcatgttaatcctcttataatataatgttcagaatgaaaacttaatctt 247  Q
    |||||||||||||||||||||||| |||||||| | |||||||||||||| ||||||||||  | || |||| | ||||||||||||||| ||||||||     
T  3375 aaattgagggttagggtttgatgatgattctgagg-ggaatgggtaatgaatcatgttaattttgttgtaatgtgatgttcagaatgaaatcttaatcta 3473  T
Q  248 tgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaa 306  Q
    |  |||||||||||||| |||||||||||||| ||| | ||||||||||||||||||||    
T  3474 tactgttgctgtgatcacaaattgattgaaaa-tataattgattggatgaattgatgaa 3531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 74; Significance: 6e-34; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 149 - 306
Target Start/End: Original strand, 3704 - 3859
Alignment:
Q  149 aaattgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatcttt 248  Q
    |||||||||||||||||||||||| |||||||| | ||| ||||||||||||||||||||  | || |||| | |||||| |||||||| |||||||| |    
T  3704 aaattgagggttagggtttgatgatgattctgaggggga-tgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctat 3802  T
Q  249 gttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaa 306  Q
      ||||| ||||||||||||||||||||||| ||| | ||||||||||||||||||||    
T  3803 actgttgttgtgatcataaattgattgaaaa-tataattgattggatgaattgatgaa 3859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 64; Significance: 6e-28; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 56 - 258
Target Start/End: Original strand, 1727 - 1920
Alignment:
Q  56 caaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattga 155  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | | ||||||||| |||||   ||||   |||    
T  1727 caaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaat---aata---tga 1819  T
Q  156 gggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttg 255  Q
      ||||||||||||||| ||||||||   |||||| |||| ||| |||||| |  |||   ||| ||||||| ||||||||| |||||||  || |||||    
T  1820 aagttagggtttgatgatgattctga--tggaatgagtaaggatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatccatgctgttg 1917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 64; E-Value: 6e-28
Query Start/End: Original strand, 56 - 258
Target Start/End: Original strand, 5750 - 5943
Alignment:
Q  56 caaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaataaattga 155  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | | ||||||||| |||||   ||||   |||    
T  5750 caaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaat---aata---tga 5842  T
Q  156 gggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatcctcttataatataatgttcagaatgaaaacttaatctttgttgttg 255  Q
      ||||||||||||||| ||||||||   |||||| |||| ||| |||||| |  |||   ||| ||||||| ||||||||| |||||||  || |||||    
T  5843 aagttagggtttgatgatgattctga--tggaatgagtaaggatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatccatgctgttg 5940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 61; Significance: 3e-26; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 223 - 307
Target Start/End: Complemental strand, 889 - 806
Alignment:
Q  223 atgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaat 307  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||| |||||||| |||||||||||    
T  889 atgttcagaatgaaaacttaatctgtgttgttgctgtgatcataaattgattg-gaattatgagggattggataaattgatgaat 806  T

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Target: scaffold0456; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 223 - 307
Target Start/End: Complemental strand, 8034 - 7951
Alignment:
Q  223 atgttcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaat 307  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||  ||||||||| |||||||| |||||||||||    
T  8034 atgttcagaatgaaaacttaatctgtgttgttgctgtgatcataaattgattg-gaattatgagggattggataaattgatgaat 7951  T

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Target: scaffold0456; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 57 - 132
Target Start/End: Complemental strand, 991 - 916
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagt 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| | |||||||    
T  991 aaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagt 916  T

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Target: scaffold0456; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 57 - 132
Target Start/End: Complemental strand, 8136 - 8061
Alignment:
Q  57 aaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagt 132  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||| | |||||||    
T  8136 aaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagt 8061  T

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Target: scaffold0129 (Bit Score: 57; Significance: 8e-24; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 55 - 135
Target Start/End: Original strand, 45268 - 45347
Alignment:
Q  55 gcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagtttt 135  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | | ||||||||    
T  45268 gcaaatctaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagtttt 45347  T

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Target: scaffold0107 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 13 - 117
Target Start/End: Original strand, 40482 - 40587
Alignment:
Q  13 agagaggagagcctag-aaccgattcttgctgtctaat-tttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg 110  Q
    |||||| ||||||||| |||||||| |||||||  ||| |||||||||| |||||||||||||||||||||||||||||||||||| | ||||||| |||    
T  40482 agagagaagagcctaggaaccgatt-ttgctgtgcaatctttctgcaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctg 40580  T
Q  111 aaaattg 117  Q
    |||||||    
T  40581 aaaattg 40587  T

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Target: scaffold2054 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 20 - 114
Target Start/End: Complemental strand, 810 - 717
Alignment:
Q  20 agagcctagaaccgattcttgctgtctaattttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaa 114  Q
    |||||||||||||||| |||||||||| |||| |||||||||||||||||||||| || ||||| ||||| ||| |||| ||||||| |||||||    
T  810 agagcctagaaccgatccttgctgtcttattt-ctgcaaaactaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaa 717  T

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Target: scaffold0019 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 13 - 117
Target Start/End: Complemental strand, 135578 - 135473
Alignment:
Q  13 agagaggagagccta-gaaccgattcttgctgtctaat-tttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg 110  Q
    |||||| |||||||| ||||||||| |||||||  ||| |||||| ||| |||||||||||||||||||||||||||||||||||| | ||||||| |||    
T  135578 agagagaagagcctaagaaccgatt-ttgctgtgcaatctttctgaaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctg 135480  T
Q  111 aaaattg 117  Q
    |||||||    
T  135479 aaaattg 135473  T

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Target: scaffold0310 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 50 - 117
Target Start/End: Complemental strand, 17711 - 17643
Alignment:
Q  50 tttctgcaaaa-ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattg 117  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||| ||||||| ||||||||||    
T  17711 tttctgcaaaatctaaggtaagggtgagactatctctcaataaccataatgtataatttctgaaaattg 17643  T

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Target: scaffold0235 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 13 - 115
Target Start/End: Original strand, 22543 - 22646
Alignment:
Q  13 agagaggagagcctag-aaccgattcttgctgtctaat-tttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg 110  Q
    |||||| ||||||||| |||||||| |||||||  ||| |||||||||| | |||||||||||||||||||||||||||||||||| | ||||||| |||    
T  22543 agagagaagagcctaggaaccgatt-ttgctgtgcaatatttctgcaaatccaaggtaagggtgagactatctctcaataatcatagtatataatttctg 22641  T
Q  111 aaaat 115  Q
    |||||    
T  22642 aaaat 22646  T

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Target: scaffold0020 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 101928 - 101984
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 118  Q
    ||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  101928 taaggtaagggtgagactatctctcaataatcatagtatataattcctgaaaattga 101984  T

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Target: scaffold0004 (Bit Score: 46; Significance: 3e-17; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 49 - 118
Target Start/End: Complemental strand, 116964 - 116895
Alignment:
Q  49 ttttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 118  Q
    |||||| | ||| ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||    
T  116964 ttttcttctaaattaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattga 116895  T

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Target: scaffold0004; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 96
Target Start/End: Complemental strand, 60474 - 60441
Alignment:
Q  63 aaggtaagggtgagactatctctcaataatcata 96  Q
    |||||||||||||||||| |||||||||||||||    
T  60474 aaggtaagggtgagactaactctcaataatcata 60441  T

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Target: scaffold0222 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 16875 - 16819
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 118  Q
    ||||||||||||||||||||||||||||||||||| | ||||||| |||||||||||    
T  16875 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattga 16819  T

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Target: scaffold0461 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 8 - 64
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 118  Q
    |||||||||||||||||||||||||||||||| ||||  |||||| |||||||||||    
T  8 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattga 64  T

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Target: scaffold0146 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 13687 - 13631
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 118  Q
    |||||||||||||||||||||||||||||||| ||||  |||||| |||||||||||    
T  13687 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattga 13631  T

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Target: scaffold0815 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 50 - 113
Target Start/End: Complemental strand, 1516 - 1453
Alignment:
Q  50 tttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa 113  Q
    ||||||||||| ||||||||||||||||||| |||||||| ||| |||| ||||||| ||||||    
T  1516 tttctgcaaaattaaggtaagggtgagactaactctcaatgatcttaatgtataatttctgaaa 1453  T

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Target: scaffold0124 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 34276 - 34331
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattg 117  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||| ||||||||||    
T  34276 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 34331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 12352 - 12296
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 118  Q
    ||||||||||||||| ||| |||||||| |||||||| ||||||| |||||||||||    
T  12352 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 12296  T

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Target: scaffold0790 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 51 - 90
Target Start/End: Complemental strand, 5519 - 5480
Alignment:
Q  51 ttctgcaaaactaaggtaagggtgagactatctctcaata 90  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  5519 ttctgcaaaactaaggtaagggtgagactatctttcaata 5480  T

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Target: scaffold0139 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 62 - 117
Target Start/End: Original strand, 14997 - 15052
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattg 117  Q
    ||||||||||||||||||| |||||||| ||| |||| ||||||| ||||||||||    
T  14997 taaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 15052  T

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Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 52 - 133
Target Start/End: Original strand, 493019 - 493099
Alignment:
Q  52 tctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagtt 133  Q
    |||||||  ||||||||||||||||| ||||| ||||||||| |||| ||||||| ||||||||| | ||| ||| ||||||    
T  493019 tctgcaattctaaggtaagggtgagattatctttcaataatc-taatgtataatttctgaaaattaatctaatggaatagtt 493099  T

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Target: scaffold0317 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 62 - 118
Target Start/End: Complemental strand, 1441 - 1385
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 118  Q
    |||||||||||||||||||||| ||||| ||||| || |||||||  ||||||||||    
T  1441 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattga 1385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 58 - 118
Target Start/End: Original strand, 39503 - 39563
Alignment:
Q  58 aaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 118  Q
    |||| |||||||||||||| ||| |||||||| |||||||| ||||||| | |||||||||    
T  39503 aaacaaaggtaagggtgaggctaactctcaatgatcataatatataatttcagaaaattga 39563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0348 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 9391 - 9336
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 116  Q
    |||||||||||||| || ||||| |||||| ||||||| ||||||| |||||||||    
T  9391 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 9336  T

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Target: scaffold0127 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 61 - 116
Target Start/End: Complemental strand, 10294 - 10239
Alignment:
Q  61 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 116  Q
    ||||||||||||||||| |||||  ||||||||||||| | ||||| |||||||||    
T  10294 ctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 10239  T

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Target: scaffold1318 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 62 - 116
Target Start/End: Original strand, 1913 - 1967
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 116  Q
    ||||||||||||| || ||||| |||||| ||||||| ||||||| |||||||||    
T  1913 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 1967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 116
Target Start/End: Original strand, 23558 - 23624
Alignment:
Q  50 tttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaatt 116  Q
    |||||||||  |||||||||||||| || ||||| | ||| |||||||| ||||||| |||||||||    
T  23558 tttctgcaattctaaggtaagggtgggattatctttgaatgatcataatgtataatttctgaaaatt 23624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 20 - 76
Target Start/End: Original strand, 46689 - 46746
Alignment:
Q  20 agagcctagaaccgattcttgctgtctaatt-ttctgcaaaactaaggtaagggtgag 76  Q
    ||||||||| ||||||| |||||||  | || ||||||||||||||||||||||||||    
T  46689 agagcctaggaccgatttttgctgtgcatttcttctgcaaaactaaggtaagggtgag 46746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1128 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 50 - 82
Target Start/End: Complemental strand, 561 - 529
Alignment:
Q  50 tttctgcaaaactaaggtaagggtgagactatc 82  Q
    ||||||||||| |||||||||||||||||||||    
T  561 tttctgcaaaattaaggtaagggtgagactatc 529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0335 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 62 - 118
Target Start/End: Original strand, 2628 - 2684
Alignment:
Q  62 taaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattga 118  Q
    ||||||||||||||| ||| |||||||| || ||||| ||||| | |||||||||||    
T  2628 taaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 2684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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