View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15684_high_6 (Length: 371)
Name: NF15684_high_6
Description: NF15684
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15684_high_6 |
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Alignment Details
Target: chr4 (Bit Score: 359; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 359; E-Value: 0
Query Start/End: Original strand, 1 - 359
Target Start/End: Complemental strand, 31064897 - 31064539
Alignment:
| Q |
1 |
aacacgaccaaaaagttcatctagctactacaaaaaatgtaatatttgatttacttattgccacctatatcacacaacaaaccttacaaaatcaatggta |
100 |
Q |
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| T |
31064897 |
aacacgaccaaaaagttcatctagctactacaaaaaatgtaatatttgatttacttattgccacctatatcacacaacaaaccttacaaaatcaatggta |
31064798 |
T |
|
| Q |
101 |
atgaacaaaaaactacagcaacatatgattcatcaaaattcactttcacgtcgaaagcctgcctgtatccacgtgatttataccatatgcgctttcttat |
200 |
Q |
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| T |
31064797 |
atgaacaaaaaactacagcaacatatgattcatcaaaattcactttcacgtcgaaagcctgcctgtatccacgtgatttataccatatgcgctttcttat |
31064698 |
T |
|
| Q |
201 |
agttatctgctgctttggataacgactgtattgatacaggtatacctgggccaatctgcatcaatacgattttcaatgaataacttaaaagaaagaaaat |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31064697 |
agttatctgctgctttggataacgactgtattgatacaggtatacctgggccaatctgcatcaatacgattttcaatgaataacttaaaagaaagaaaat |
31064598 |
T |
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| Q |
301 |
gcatacaagaatacgacaatgttccccatcactacagataatgacactagcaaattatg |
359 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31064597 |
gcatacaagaatacgacaatgttccccatcactacagataatgacactagcaaattatg |
31064539 |
T |
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