View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15684_low_12 (Length: 307)
Name: NF15684_low_12
Description: NF15684
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15684_low_12 |
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Alignment Details
Target: chr4 (Bit Score: 96; Significance: 4e-47; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 10 - 117
Target Start/End: Original strand, 53592793 - 53592900
Alignment:
| Q |
10 |
ataagttccaacatttaacatatcatctcaacctctctaacaactcatcaccataactcacctcctttactacaatcattcataagcacacatggtttca |
109 |
Q |
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| T |
53592793 |
ataagtttcaacatttaacatatcatctcaacctctctaacaactcattaccataactcacctcctttactaaaatcattcataagcacacatggtttca |
53592892 |
T |
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| Q |
110 |
tttccttc |
117 |
Q |
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|||||||| |
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| T |
53592893 |
tttccttc |
53592900 |
T |
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