View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15684_low_9 (Length: 330)
Name: NF15684_low_9
Description: NF15684
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15684_low_9 |
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Alignment Details
Target: chr2 (Bit Score: 292; Significance: 1e-164; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 292; E-Value: 1e-164
Query Start/End: Original strand, 1 - 308
Target Start/End: Original strand, 44651176 - 44651483
Alignment:
| Q |
1 |
agagacaataaaataaatggaaaatgagataataattggttggtggttgtccttttctatggctgaagactgattgggaatgttaatcaattgcatgaag |
100 |
Q |
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| T |
44651176 |
agagaccataaaataaatggaaaatgagataataattggttggtggttgtccttttctatggctgaagactgattgggaatgttaatcaattgcatgaag |
44651275 |
T |
|
| Q |
101 |
gaagcagccgttaggtcccaattttgaaagacttttgttctgtacactatcttagaaatcgattattattctcatgcaaatttcactaaccaagcctttc |
200 |
Q |
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| T |
44651276 |
gaagcagccgttaggtcccaattttgaaagacttttgttctgtacactatattagaaatcgataattattctcatgcaaatttcactaaccaagcctttc |
44651375 |
T |
|
| Q |
201 |
agtaattttaaatagtgcatgtatatgttccactttatcattcccaagaatatgaagtgtttataaacaatttagtgcattatatattctacaaataatg |
300 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44651376 |
agtaattttaaatagtgcatgtatatgttccactttatcattcccgagaatatgaagtgtttataaacaatttagtgcattatatattctacaaataatg |
44651475 |
T |
|
| Q |
301 |
atctcctt |
308 |
Q |
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|||||||| |
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| T |
44651476 |
atctcctt |
44651483 |
T |
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