View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15685_low_6 (Length: 248)

Name: NF15685_low_6
Description: NF15685
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15685_low_6
NF15685_low_6
[»] chr2 (4 HSPs)
chr2 (1-245)||(38204656-38204889)
chr2 (156-237)||(6621463-6621545)
chr2 (120-205)||(11257091-11257176)
chr2 (160-239)||(37357285-37357365)
[»] chr3 (6 HSPs)
chr3 (119-246)||(50384590-50384716)
chr3 (149-248)||(40397451-40397546)
chr3 (139-239)||(23670445-23670535)
chr3 (139-239)||(24042721-24042811)
chr3 (122-174)||(43023375-43023425)
chr3 (119-203)||(29247352-29247436)
[»] chr1 (6 HSPs)
chr1 (147-248)||(17872508-17872607)
chr1 (146-248)||(15892144-15892248)
chr1 (160-229)||(3430593-3430663)
chr1 (146-239)||(42795398-42795492)
chr1 (119-203)||(19940550-19940635)
chr1 (123-184)||(34502829-34502889)
[»] scaffold0227 (1 HSPs)
scaffold0227 (139-247)||(4761-4870)
[»] chr8 (3 HSPs)
chr8 (159-247)||(8107982-8108071)
chr8 (141-202)||(27794225-27794286)
chr8 (149-185)||(33609670-33609706)
[»] chr4 (3 HSPs)
chr4 (116-203)||(31938218-31938303)
chr4 (166-203)||(3154711-3154748)
chr4 (15-60)||(29540705-29540750)
[»] chr5 (3 HSPs)
chr5 (148-248)||(18259749-18259848)
chr5 (140-205)||(20869391-20869456)
chr5 (160-205)||(8950274-8950319)
[»] scaffold0009 (1 HSPs)
scaffold0009 (119-202)||(106443-106526)
[»] chr7 (3 HSPs)
chr7 (160-246)||(46777289-46777376)
chr7 (119-205)||(30413684-30413770)
chr7 (1-57)||(3126923-3126979)


Alignment Details
Target: chr2 (Bit Score: 145; Significance: 2e-76; HSPs: 4)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 38204889 - 38204656
Alignment:
Q  1 ttctaagatcataaatatctaaagaagagatggtgcggtcatcgatgcctacatcaacatctctctgatcaagaatgttatcataatcattgatgggatt 100  Q
    |||||||||||||||||||||||||| ||   |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||    
T  38204889 ttctaagatcataaatatctaaagaaaagggtgtgcggtcatcgatgcctacatcaacatctgtcagatcaagaatgttatcataatcattgatgggatt 38204790  T
Q  101 gtcatcatttaaatttgagtcatgttaaccagtgcccgggggcagtggttaaggaagttaaaagagaaagttttaaattaaaaatgtcactttttatact 200  Q
    ||||||||||||||||| ||||||||            |||||| || |||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  38204789 gtcatcatttaaatttgggtcatgtt------------ggggcactgattaaggaagttaaaagagaaagttttgaattaaaaatgtcactttttatact 38204702  T
Q  201 tttaa-accttgaatgcacaagtttcaatgtaacattactgcattt 245  Q
    ||||| |  ||||||||||||||||||||||||||||||| |||||    
T  38204701 tttaagattttgaatgcacaagtttcaatgtaacattactacattt 38204656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 156 - 237
Target Start/End: Original strand, 6621463 - 6621545
Alignment:
Q  156 agttaaaagagaaagttttaaattaaaaatgtcactttttatacttttaa-accttgaatgcacaagtttcaatgtaacatta 237  Q
    |||||||| ||||||||||| ||||||||||||||| |||||| |||||| || |||||||||||||||||||||||||||||    
T  6621463 agttaaaaaagaaagttttatattaaaaatgtcactctttatatttttaagactttgaatgcacaagtttcaatgtaacatta 6621545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 205
Target Start/End: Complemental strand, 11257176 - 11257091
Alignment:
Q  120 tcatgttaaccagtgcccgggggcagtggttaaggaagttaaaagagaaagttttaaattaaaaatgtcactttttatacttttaa 205  Q
    ||||||||||| |||||| |||||| |||||||||||| |||||| |||| |||||| | |||| |  |||||||||  |||||||    
T  11257176 tcatgttaacccgtgcccaggggcattggttaaggaagctaaaagtgaaaattttaagtcaaaagtaacactttttaagcttttaa 11257091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 160 - 239
Target Start/End: Complemental strand, 37357365 - 37357285
Alignment:
Q  160 aaaagagaaagttttaaattaaaaatgtcactttttatactttt-aaaccttgaatgcacaagtttcaatgtaacattact 239  Q
    |||| ||||| ||||| ||| ||||| ||||||||||||||||| | |  ||||||||||||||||||||| || ||||||    
T  37357365 aaaaaagaaaattttagattgaaaatatcactttttatacttttgagaagttgaatgcacaagtttcaatgcaagattact 37357285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 86; Significance: 3e-41; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 119 - 246
Target Start/End: Original strand, 50384590 - 50384716
Alignment:
Q  119 gtcatgttaaccagtgcccgggggcagtggttaaggaagttaaaagagaaagttttaaattaaaaatgtcactttttatacttttaa-accttgaatgca 217  Q
    |||||||||||| ||||||||   || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  50384590 gtcatgttaaccggtgcccgga--cactggttaaggaagttaaaagagaaagttttaaattaaaaatgtcactttttatacttttaagaccttgaatgca 50384687  T
Q  218 caagtttcaatgtaacattactgcatttg 246  Q
    |||||| |||||||| |||||| ||||||    
T  50384688 caagttccaatgtaatattactacatttg 50384716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 149 - 248
Target Start/End: Original strand, 40397451 - 40397546
Alignment:
Q  149 ttaaggaagttaaaagagaaagttttaaattaaaaatgtcactttttatacttttaaaccttgaatgcacaagtttcaatgtaacattactgcatttggc 248  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||    || ||||||||||||||||||||||||||||||||||||  |||||||    
T  40397451 ttaaggaagttaaaagagaaagttttaaatttaaaatgtcacttttta----ttaaaaccttgaatgcacaagtttcaatgtaacattactatatttggc 40397546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 23670445 - 23670535
Alignment:
Q  139 ggggcagtggttaaggaagttaaaagagaaagttttaaattaaaaatgtcactttttatacttttaaaccttgaatgcacaagtttcaatgtaacattac 238  Q
    |||||| | ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||        ||||| |||||||||||||||||||||    
T  23670445 ggggcactagttaaggaagttaaaagagaaggttttaaatt--aaatgtcactttttatactttt--------aatgcgcaagtttcaatgtaacattac 23670534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 139 - 239
Target Start/End: Original strand, 24042721 - 24042811
Alignment:
Q  139 ggggcagtggttaaggaagttaaaagagaaagttttaaattaaaaatgtcactttttatacttttaaaccttgaatgcacaagtttcaatgtaacattac 238  Q
    |||||| | ||||||||||||||||||||| ||||||||||  ||||||||||||||||||||||        ||||| |||||||||||||||||||||    
T  24042721 ggggcactagttaaggaagttaaaagagaaggttttaaatt--aaatgtcactttttatactttt--------aatgcgcaagtttcaatgtaacattac 24042810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 174
Target Start/End: Original strand, 43023375 - 43023425
Alignment:
Q  122 atgttaaccagtgcccgggggcagtggttaaggaagttaaaagagaaagtttt 174  Q
    |||||||||||||||  |||||| ||||||||||||||||| |||||| ||||    
T  43023375 atgttaaccagtgcc--ggggcaatggttaaggaagttaaaggagaaaatttt 43023425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 119 - 203
Target Start/End: Complemental strand, 29247436 - 29247352
Alignment:
Q  119 gtcatgttaaccagtgcccgggggcagtggttaaggaagttaaaagagaaagttttaaattaaaaatgtcactttttatactttt 203  Q
    ||||||||||||||||||| || ||| | ||| |||||  ||||| || || ||||||| | |||||  ||||||||||||||||    
T  29247436 gtcatgttaaccagtgccccggagcactagttgaggaaactaaaaaagtaaattttaaagttaaaataacactttttatactttt 29247352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 63; Significance: 2e-27; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 147 - 248
Target Start/End: Complemental strand, 17872607 - 17872508
Alignment:
Q  147 ggttaaggaagttaaaagagaaagttttaaattaaaaatgtcactttttatacttttaaaccttgaatgcacaagtttcaatgtaacattactgcatttg 246  Q
    |||||||||||||||  |||||| |||||||||||||| |||| | ||||||||||||||||||||||||||||||| ||||||||||||| | ||||||    
T  17872607 ggttaaggaagttaa--gagaaaattttaaattaaaaaagtcaatatttatacttttaaaccttgaatgcacaagttccaatgtaacattattacatttg 17872510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 146 - 248
Target Start/End: Original strand, 15892144 - 15892248
Alignment:
Q  146 tggttaaggaagttaaaa-gagaaagttttaaattaaaaatgtcactttttatacttttaa-accttgaatgcacaagtttcaatgtaacattactgcat 243  Q
    |||||||||||||||||| ||| |||||||||||||||||| |||||||||||||||| || ||||| |||| ||||||||||| ||||||||||| |||    
T  15892144 tggttaaggaagttaaaaagaggaagttttaaattaaaaatatcactttttatactttcaagaccttaaatgtacaagtttcaacgtaacattactacat 15892243  T
Q  244 ttggc 248  Q
    |||||    
T  15892244 ttggc 15892248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 160 - 229
Target Start/End: Complemental strand, 3430663 - 3430593
Alignment:
Q  160 aaaagagaaagttttaaattaaaaatgtcactttttatactttt-aaaccttgaatgcacaagtttcaatg 229  Q
    |||| |||||||||||  |||||||| ||||||||||||||||| | |  ||||||||||||||| |||||    
T  3430663 aaaaaagaaagttttaggttaaaaatatcactttttatacttttgagaagttgaatgcacaagttccaatg 3430593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 146 - 239
Target Start/End: Complemental strand, 42795492 - 42795398
Alignment:
Q  146 tggttaaggaagttaaaagagaaagttttaaattaaaaatgtcactttttatacttttaaacc-ttgaatgcacaagtttcaatgtaacattact 239  Q
    |||||||||||   |||| ||||| |||||| || ||||  ||| ||||||||||||||||   ||||||| |||||||||||||||| ||||||    
T  42795492 tggttaaggaaacaaaaaaagaaaattttaagttgaaaaaatcattttttatacttttaaaaagttgaatgtacaagtttcaatgtaagattact 42795398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 119 - 203
Target Start/End: Original strand, 19940550 - 19940635
Alignment:
Q  119 gtcatgttaaccagtgcccg-ggggcagtggttaaggaagttaaaagagaaagttttaaattaaaaatgtcactttttatactttt 203  Q
    |||||||||||| ||||||  |||||| |||||||||||  |||||  |||||||||||| | |||||  |||||||||| |||||    
T  19940550 gtcatgttaaccggtgcccccggggcactggttaaggaaactaaaaaggaaagttttaaagtgaaaataacactttttatgctttt 19940635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 123 - 184
Target Start/End: Original strand, 34502829 - 34502889
Alignment:
Q  123 tgttaaccagtgcccgggggcagtggttaaggaagttaaaagagaaagttttaaattaaaaa 184  Q
    ||||||||||||||||||| ||  |||||||||||  |||||||||| |||||| |||||||    
T  34502829 tgttaaccagtgcccgggg-caccggttaaggaagggaaaagagaaaattttaacttaaaaa 34502889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0227 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0227
Description:

Target: scaffold0227; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 139 - 247
Target Start/End: Complemental strand, 4870 - 4761
Alignment:
Q  139 ggggcagtggttaaggaagttaaaagagaaagttttaaattaaaaatgtcactttttatactttt-aaaccttgaatgcacaagtttcaatgtaacatta 237  Q
    |||||| ||||||||||||||||| || |||   ||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||||||||||||    
T  4870 ggggcactggttaaggaagttaaacgaaaaaaaattaaattaaaaatgtcaatttttatacttttaaaatcttgaatgcacaagtttcaatgtaacatta 4771  T
Q  238 ctgcatttgg 247  Q
     | |||||||    
T  4770 ttacatttgg 4761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 62; Significance: 7e-27; HSPs: 3)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 159 - 247
Target Start/End: Complemental strand, 8108071 - 8107982
Alignment:
Q  159 taaaagagaaagttttaaattaaaaatgtcactttttatacttttaa-accttgaatgcacaagtttcaatgtaacattactgcatttgg 247  Q
    ||||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||| ||||||||||||| ||||||| |||||||    
T  8108071 taaaagagaaaattttaaattaaaaatgtcacattttatacttttaagaccttgaatgcataagtttcaatgtagcattactacatttgg 8107982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 141 - 202
Target Start/End: Original strand, 27794225 - 27794286
Alignment:
Q  141 ggcagtggttaaggaagttaaaagagaaagttttaaattaaaaatgtcactttttatacttt 202  Q
    |||| |||||||  || |||||||||||| ||||||||| ||||||| ||||||| ||||||    
T  27794225 ggcactggttaaaaaaattaaaagagaaaattttaaattgaaaatgttactttttttacttt 27794286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 149 - 185
Target Start/End: Original strand, 33609670 - 33609706
Alignment:
Q  149 ttaaggaagttaaaagagaaagttttaaattaaaaat 185  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  33609670 ttaaggaagttgaaagagaaaattttaaattaaaaat 33609706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 61; Significance: 3e-26; HSPs: 3)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 116 - 203
Target Start/End: Complemental strand, 31938303 - 31938218
Alignment:
Q  116 tgagtcatgttaaccagtgcccgggggcagtggttaaggaagttaaaagagaaagttttaaattaaaaatgtcactttttatactttt 203  Q
    |||| |||||||||| ||||  ||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  31938303 tgagccatgttaaccggtgc--gggggcactggttaagaaagttaaaagagaaagttttaaattaaaaatgtcactttttatactttt 31938218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 166 - 203
Target Start/End: Complemental strand, 3154748 - 3154711
Alignment:
Q  166 gaaagttttaaattaaaaatgtcactttttatactttt 203  Q
    |||||||||||||| |||||||||||||||| ||||||    
T  3154748 gaaagttttaaattgaaaatgtcactttttagactttt 3154711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 60
Target Start/End: Original strand, 29540705 - 29540750
Alignment:
Q  15 atatctaaagaagagatggtgcggtcatcgatgcctacatcaacat 60  Q
    |||||||||| || |||| || ||||||||||||||||||||||||    
T  29540705 atatctaaaggagggatgatgtggtcatcgatgcctacatcaacat 29540750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 55; Significance: 1e-22; HSPs: 3)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 148 - 248
Target Start/End: Original strand, 18259749 - 18259848
Alignment:
Q  148 gttaaggaagttaaaagagaaagttttaaattaaaaatgtcactttttatacttttaa-accttgaatgcacaagtttcaatgtaacattactgcatttg 246  Q
    ||||| ||||||||||||||  ||||| |||||||||||||| ||||||||||||| | ||||||||||||||| |||||||||||||||| | ||||||    
T  18259749 gttaaagaagttaaaagaga--gttttgaattaaaaatgtcattttttatactttttagaccttgaatgcacaaatttcaatgtaacattagtacatttg 18259846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 140 - 205
Target Start/End: Complemental strand, 20869456 - 20869391
Alignment:
Q  140 gggcagtggttaaggaagttaaaagagaaagttttaaattaaaaatgtcactttttatacttttaa 205  Q
    ||||| ||||||||||||  |||||||||| |||||| ||||||||| |||||||||  |||||||    
T  20869456 gggcactggttaaggaagccaaaagagaaaattttaatttaaaaatgacactttttaagcttttaa 20869391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 160 - 205
Target Start/End: Complemental strand, 8950319 - 8950274
Alignment:
Q  160 aaaagagaaagttttaaattaaaaatgtcactttttatacttttaa 205  Q
    ||||||||||||||||| ||||||||| |||||||||  |||||||    
T  8950319 aaaagagaaagttttaacttaaaaatgacactttttaagcttttaa 8950274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 119 - 202
Target Start/End: Original strand, 106443 - 106526
Alignment:
Q  119 gtcatgttaaccagtgcccgggggcagtggttaaggaagttaaaagagaaagttttaaattaaaaatgtcactttttatacttt 202  Q
    |||||||||||||||| || | | || |||||||||||  ||||| ||||||||||||| | |||||  |||||||||| ||||    
T  106443 gtcatgttaaccagtgtcccgagacactggttaaggaaactaaaaaagaaagttttaaagtgaaaataacactttttatgcttt 106526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 32; Significance: 0.000000005; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 160 - 246
Target Start/End: Complemental strand, 46777376 - 46777289
Alignment:
Q  160 aaaagagaaagttttaaattaaaaatgtcactttttatactttt-aaaccttgaatgcacaagtttcaatgtaacattactgcatttg 246  Q
    ||||||||||||||||  || ||||| ||||||||||| ||||| | |  ||||||||||||||| ||||| || ||||||| |||||    
T  46777376 aaaagagaaagttttatgttgaaaatatcactttttatgcttttgagaagttgaatgcacaagttccaatgcaagattactgtatttg 46777289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 119 - 205
Target Start/End: Complemental strand, 30413770 - 30413684
Alignment:
Q  119 gtcatgttaaccagtgcccgggggcagtggttaaggaagttaaaagagaaagttttaaattaaaaatgtcactttttatacttttaa 205  Q
    |||||||||||||||| || |||||| | ||||||||||| |||||| ||| || ||| | ||||| | ||||||||| | ||||||    
T  30413770 gtcatgttaaccagtgtcctggggcactagttaaggaagtcaaaagaaaaaattgtaagtcaaaaaagacactttttaaatttttaa 30413684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 3126979 - 3126923
Alignment:
Q  1 ttctaagatcataaatatctaaagaagagatggtgcggtcatcgatgcctacatcaa 57  Q
    ||||| ||||||| | |||||||| |||||||  | |||||||||||||||||||||    
T  3126979 ttctaggatcatataaatctaaaggagagatgaagtggtcatcgatgcctacatcaa 3126923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University