View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15686_high_1 (Length: 521)
Name: NF15686_high_1
Description: NF15686
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15686_high_1 |
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Alignment Details
Target: chr2 (Bit Score: 478; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 478; E-Value: 0
Query Start/End: Original strand, 12 - 504
Target Start/End: Complemental strand, 37291712 - 37291219
Alignment:
| Q |
12 |
aagaatatcagaaatttatactatttggagaaaatttaaagtatatgaatgagaatctgtagcacacatactgtgtgagaaaaacattgttgagaaagta |
111 |
Q |
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| T |
37291712 |
aagaaaatcagaaatttatactatttggagaaaatttaaagtatatgaatgagaatctgtagcacacatactgtgtgagaaaaacattgttgagaaagta |
37291613 |
T |
|
| Q |
112 |
aacctgcaaaagaaggaacaaatctcagcaaaaatatgctacttgatgctaaagcaagccgtgcatcaagaatg-cttgaggaacgacgaagtttccaat |
210 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
37291612 |
aacctgcaaaagaaggaacaaatctcagcaaaaatatgttacttgatgctaaagcaagccgtgcatcaagaatggcttgaggaacgacgaagtttccaat |
37291513 |
T |
|
| Q |
211 |
gtttaagatgaaaggattttaaatggttaaaaatactaaccaaaagattgtcataatttgcttcttgggtggacctcggaactctggattgtgcctgtgc |
310 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37291512 |
gtttaagatgaaaggattttaaatggttaaaaatactaaccaaaagattgtcataatttgcttcttgggtggacctcggaactctggattgtgcctgtgc |
37291413 |
T |
|
| Q |
311 |
tcaagaatccatacaacagctccgacaaaaaggaaaaaggctccggtaacacaccacatttgagcagtgaatggtttgaggaaagcccaagggcttgatt |
410 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37291412 |
tcaagaatccatacaacagctccgacaaaaaggaaaaaggctccggtaacacaccacatttgagcagtgaatggtttgaggaaagcccaagggcttgatt |
37291313 |
T |
|
| Q |
411 |
tgatctccttgacaggaacaacaactaccagccctgattccatgaaaggttgagtgaaatccaaaatccttgttcggtttgggacaattgtaac |
504 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37291312 |
tgatctccttgacaggaacaacaactaccagccctgattccatgaaaggttgagtgaaatccaaaatccttgttcggtttgggacaattgtaac |
37291219 |
T |
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