View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15686_high_14 (Length: 233)
Name: NF15686_high_14
Description: NF15686
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15686_high_14 |
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Alignment Details
Target: chr3 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 19 - 222
Target Start/End: Complemental strand, 1713706 - 1713503
Alignment:
| Q |
19 |
catgtgtcccatgttaatatatgactccatcgacatgctttgggaacaatacagtgccccttccatcataataatttagaagtaaaaacaaatgaatatt |
118 |
Q |
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| T |
1713706 |
catgtgtcccatgttaatatatgactccatcgacatgctttgggaacaatacagtgccccttccatcataataatttagaagtaaaaacaaatgaatatt |
1713607 |
T |
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| Q |
119 |
tcaaattaagttgtaggtttcctagcgtagtactcttctaattaagttgtagcttctcattcaaacatatttttaaacacgggctttgtattttcttgtt |
218 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
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| T |
1713606 |
tcaaattaagttgtaggtttcctagcgtagtactcttctaattaagttgtagcttctcattcaaacatatttctaaacacgggctttgtattttcttgtt |
1713507 |
T |
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| Q |
219 |
tcat |
222 |
Q |
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|||| |
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| T |
1713506 |
tcat |
1713503 |
T |
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