View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15686_high_2 (Length: 496)
Name: NF15686_high_2
Description: NF15686
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15686_high_2 |
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Alignment Details
Target: chr2 (Bit Score: 304; Significance: 1e-171; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 304; E-Value: 1e-171
Query Start/End: Original strand, 17 - 360
Target Start/End: Original strand, 31451464 - 31451814
Alignment:
| Q |
17 |
atgaataggtcgtgggaaacaatgttttttgggattattgtgtttggtgtaacattttagataggcaaataacggaatt--aacatgaattataatccaa |
114 |
Q |
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| T |
31451464 |
atgaataggtcgtgggaaacaatgttttttgggattattgtgtttggtgtaacattttagataggcaaataacggaattttaacatgaattataatccaa |
31451563 |
T |
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| Q |
115 |
atctaattttaatgagtttaattttgatacatattctatgtaaattttatgcactattaatcaattcctccctcaacataa-----tagaatcacttcca |
209 |
Q |
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| T |
31451564 |
atctaattttaatgagttcaattttgatacatattctatgtaaattttatgcactattaatcaattcctccctcaacataaagtagtagaatcacttcca |
31451663 |
T |
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| Q |
210 |
atcagtaagtcatttttaagattgttacaatcaaaatttatgcaattggttctgaattgtttatttctttgttgaaatctgaatgatgtgttatatgttc |
309 |
Q |
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| T |
31451664 |
atcagtaagtaatttttaagattgttacaatcaaaatttatgcaattggttctgaattgtttatttctttgttgaaatctgaataatgtgtgatatgttc |
31451763 |
T |
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| Q |
310 |
caatttctgtgcttttatttttcttttgcttcaatttgtttcagtgtagtt |
360 |
Q |
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| T |
31451764 |
caatttctgtgcttttatttttcttttgcttcaatttgtttcagtgtagtt |
31451814 |
T |
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