View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15689_low_2 (Length: 423)
Name: NF15689_low_2
Description: NF15689
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15689_low_2 |
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Alignment Details
Target: chr2 (Bit Score: 264; Significance: 1e-147; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 264; E-Value: 1e-147
Query Start/End: Original strand, 72 - 350
Target Start/End: Complemental strand, 41697234 - 41696955
Alignment:
| Q |
72 |
gggaatgttaatttaaatcgtagcttttctggttcgttgtttagtagaagctcaagaagaagaagcagaacttgggttacagaagaataatgatttggtt |
171 |
Q |
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| T |
41697234 |
gggaatgttaatttaaatcgtagcttttctggttcgttgtttcgtagaagctcaagaagaagaagcagaacttgggttacagaagaataatgatttggtt |
41697135 |
T |
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| Q |
172 |
ttgtttggattaaaacttgaaagcaagttattcatttaaa-tttaaattcttaatgtaaatagcataaagttgtgctataattaagtttagtagatgatt |
270 |
Q |
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|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
41697134 |
ttgtttggattaaaacttgaaagcaagttattcatttaaattttaaattcttaatgtaaatagcataaaattgtgctataattaagtttagtagatgatt |
41697035 |
T |
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| Q |
271 |
attgaagggtgcaagataaggattgttgttcttgctgatcaacaaacatatatagttgggaaagaagctataagtgatgc |
350 |
Q |
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| T |
41697034 |
attgaagggtgcaagataaggattgttgttcttgctgatcaacaaacatatatagttgggaaagaagctataagtgatgc |
41696955 |
T |
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