View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15691_high_3 (Length: 417)
Name: NF15691_high_3
Description: NF15691
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15691_high_3 |
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Alignment Details
Target: chr4 (Bit Score: 370; Significance: 0; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 1 - 401
Target Start/End: Original strand, 21751922 - 21752328
Alignment:
| Q |
1 |
attagttctaatattggtaatatgcctcatgcatttgaatatcaagcacaaagacaagttaggtaacaatataacac-------agtacacagtagtaaa |
93 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
21751922 |
attagttctaatattggtaatatgcctcatgcatttgaatatcaagcacaaagacaagttaggtaacaatataacacagtacacagtacacagtagtaaa |
21752021 |
T |
|
| Q |
94 |
acaagttttccagagcaataaatgaataagaacaagcagttatacggttttgggtatttgtggactcaattattacatatagttgcagtttctgattgtt |
193 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
21752022 |
acaagttttccagagcaataaatgaataagaacaagcagttatacggttttgggtatttgtggactcaattattacatatagttgcagtttctgattgtt |
21752121 |
T |
|
| Q |
194 |
atttttctagaaaagaggacctgcctcttaaaatcattaacttggaccagcttaactatgtccagatttaaactagcattaatcaaacaccaactaccac |
293 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21752122 |
atttttctagaaaagaggacctgcctcttaaaatcattaacttggaccagcttaactatgtccagatttaaactagcattaatcaaacaccaactacca- |
21752220 |
T |
|
| Q |
294 |
cccccatcactcactctgtacttccatttaagactgtgttacagatgattagtctcaacctctgctggtttaacattccaagcttattaacacaaacaag |
393 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
21752221 |
cccccatcactcactctgtacttccatttaagactgtgttacagatgattagtctcagcctctgctggtttaacattccaagcttattaacacaaacaag |
21752320 |
T |
|
| Q |
394 |
gttattaa |
401 |
Q |
| |
|
|||||||| |
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|
| T |
21752321 |
gttattaa |
21752328 |
T |
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