View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15694_high_20 (Length: 281)
Name: NF15694_high_20
Description: NF15694
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15694_high_20 |
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Alignment Details
Target: chr1 (Bit Score: 250; Significance: 1e-139; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 11 - 268
Target Start/End: Original strand, 34325637 - 34325894
Alignment:
| Q |
11 |
cacagactctttatttccatacactgaactcaagatgttcctcaaattctctctgcatttaatcgatacagttttatgtttcgtatccaaaaatttaggg |
110 |
Q |
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| T |
34325637 |
cacagactctttatttccatacactgaactcaagatgttcctcaaattctctctgcatttaattgatacagttttatgtttcctatccaaaaatttaggg |
34325736 |
T |
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| Q |
111 |
aaactatggcctaatctaaagagaatacgtacctttgtttaacacgctcaaaaattgcagaggcaattcccttttgattcaataaaaaatcaatcagcca |
210 |
Q |
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| T |
34325737 |
aaactatggcctaatctaaagagaatacgtacctttgtttaacacgctcaaaaattgcagaggcaattcccttttgattcaataaaaaatcaatcagcca |
34325836 |
T |
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| Q |
211 |
aagcaagggtaggagtaacttgatcctccaatcatcaacaattgctttgttgttcatg |
268 |
Q |
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| T |
34325837 |
aagcaagggtaggagtaacttgatcctccaatcatcaacaattgctttgttgttcatg |
34325894 |
T |
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