View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15694_high_5 (Length: 533)

Name: NF15694_high_5
Description: NF15694
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15694_high_5
NF15694_high_5
[»] chr3 (43 HSPs)
chr3 (18-523)||(50271617-50272133)
chr3 (124-238)||(49429454-49429568)
chr3 (123-246)||(166780-166904)
chr3 (125-246)||(27394502-27394623)
chr3 (122-246)||(33528184-33528309)
chr3 (124-249)||(45431620-45431746)
chr3 (120-228)||(29226315-29226424)
chr3 (123-246)||(11483605-11483729)
chr3 (118-228)||(50381701-50381812)
chr3 (121-246)||(50676846-50676972)
chr3 (135-246)||(1102675-1102787)
chr3 (124-228)||(46247253-46247361)
chr3 (124-246)||(46798575-46798698)
chr3 (124-162)||(2259150-2259188)
chr3 (121-238)||(9489467-9489585)
chr3 (124-162)||(30162650-30162688)
chr3 (137-246)||(37756392-37756502)
chr3 (125-162)||(25165434-25165471)
chr3 (126-246)||(47864631-47864752)
chr3 (124-246)||(27817047-27817169)
chr3 (131-246)||(38414884-38414999)
chr3 (127-246)||(39739270-39739390)
chr3 (136-188)||(43527815-43527867)
chr3 (171-246)||(29645806-29645881)
chr3 (124-163)||(32421341-32421380)
chr3 (123-162)||(34225187-34225226)
chr3 (140-246)||(48717422-48717529)
chr3 (195-246)||(54457218-54457269)
chr3 (124-162)||(55426107-55426145)
chr3 (124-160)||(36590383-36590419)
chr3 (182-246)||(43897654-43897718)
chr3 (195-246)||(8930956-8931007)
chr3 (140-243)||(24651134-24651237)
chr3 (119-157)||(7239794-7239832)
chr3 (121-228)||(9624973-9625081)
chr3 (125-162)||(7517934-7517971)
chr3 (122-228)||(27183678-27183785)
chr3 (172-229)||(31419625-31419682)
chr3 (157-246)||(40412294-40412383)
chr3 (125-205)||(46795921-46796001)
chr3 (124-160)||(1084094-1084130)
chr3 (198-246)||(1325310-1325358)
chr3 (124-191)||(45118637-45118704)
[»] chr2 (30 HSPs)
chr2 (124-228)||(43684272-43684376)
chr2 (124-228)||(24202143-24202248)
chr2 (125-246)||(43027149-43027271)
chr2 (145-246)||(37886204-37886305)
chr2 (126-246)||(29090411-29090531)
chr2 (140-246)||(42541165-42541271)
chr2 (124-167)||(41541574-41541617)
chr2 (127-246)||(18949664-18949783)
chr2 (120-246)||(27463506-27463632)
chr2 (125-234)||(33482633-33482743)
chr2 (124-228)||(20375586-20375691)
chr2 (127-191)||(32084841-32084906)
chr2 (182-246)||(37592201-37592265)
chr2 (183-246)||(5207145-5207208)
chr2 (119-162)||(34107483-34107526)
chr2 (125-164)||(38790143-38790182)
chr2 (128-162)||(16403522-16403556)
chr2 (120-162)||(41749936-41749978)
chr2 (124-228)||(20435774-20435879)
chr2 (131-228)||(25783211-25783308)
chr2 (125-162)||(31149165-31149202)
chr2 (135-225)||(1962830-1962921)
chr2 (123-162)||(11069409-11069448)
chr2 (124-246)||(12183714-12183837)
chr2 (131-246)||(31605499-31605614)
chr2 (124-162)||(25553209-25553247)
chr2 (121-249)||(19843339-19843468)
chr2 (130-246)||(33065236-33065353)
chr2 (123-228)||(29034968-29035074)
chr2 (124-160)||(40203345-40203381)
[»] chr4 (36 HSPs)
chr4 (124-246)||(37574266-37574388)
chr4 (125-249)||(38690660-38690785)
chr4 (127-246)||(16556447-16556567)
chr4 (131-246)||(13539819-13539933)
chr4 (122-217)||(34974693-34974788)
chr4 (127-229)||(43362164-43362267)
chr4 (124-246)||(46283115-46283238)
chr4 (145-239)||(44251313-44251407)
chr4 (125-228)||(40406957-40407062)
chr4 (122-249)||(29889754-29889882)
chr4 (122-162)||(51974738-51974778)
chr4 (122-228)||(56555538-56555646)
chr4 (181-246)||(25234837-25234902)
chr4 (122-225)||(2832071-2832175)
chr4 (124-246)||(50815700-50815823)
chr4 (123-162)||(27862895-27862934)
chr4 (195-246)||(35733439-35733490)
chr4 (123-162)||(49635424-49635463)
chr4 (145-246)||(2766737-2766839)
chr4 (124-162)||(41971363-41971401)
chr4 (122-228)||(9692953-9693060)
chr4 (127-246)||(26885379-26885499)
chr4 (127-163)||(39387474-39387510)
chr4 (131-246)||(49811387-49811502)
chr4 (123-162)||(8716454-8716493)
chr4 (137-243)||(32037573-32037680)
chr4 (127-162)||(36993037-36993072)
chr4 (195-246)||(49607615-49607666)
chr4 (124-162)||(13210228-13210266)
chr4 (124-162)||(23448966-23449004)
chr4 (128-162)||(35909093-35909127)
chr4 (135-164)||(9884829-9884858)
chr4 (122-162)||(8716545-8716585)
chr4 (195-243)||(22525453-22525501)
chr4 (122-162)||(43084438-43084478)
chr4 (124-191)||(55055913-55055980)
[»] chr7 (46 HSPs)
chr7 (122-246)||(5228062-5228186)
chr7 (119-246)||(14707281-14707408)
chr7 (124-246)||(15025149-15025272)
chr7 (148-228)||(10091454-10091534)
chr7 (123-228)||(40273813-40273919)
chr7 (131-248)||(46243291-46243409)
chr7 (124-248)||(37665737-37665862)
chr7 (124-246)||(24029978-24030100)
chr7 (124-246)||(48433689-48433812)
chr7 (131-228)||(44662460-44662558)
chr7 (127-239)||(20013578-20013690)
chr7 (140-228)||(20529906-20529994)
chr7 (131-246)||(23602274-23602390)
chr7 (128-244)||(48258165-48258281)
chr7 (131-246)||(9668795-9668909)
chr7 (140-246)||(10624777-10624882)
chr7 (128-228)||(12166079-12166180)
chr7 (122-162)||(23824655-23824695)
chr7 (124-230)||(33248797-33248904)
chr7 (121-162)||(44986584-44986625)
chr7 (123-246)||(46266660-46266784)
chr7 (124-246)||(26455984-26456107)
chr7 (127-162)||(27454007-27454042)
chr7 (195-246)||(32376504-32376555)
chr7 (124-162)||(3902337-3902375)
chr7 (124-162)||(36528283-36528321)
chr7 (128-162)||(42554631-42554665)
chr7 (114-246)||(26606088-26606221)
chr7 (124-228)||(31793461-31793566)
chr7 (125-162)||(42338311-42338348)
chr7 (119-191)||(46570005-46570078)
chr7 (123-159)||(1575686-1575722)
chr7 (123-226)||(8133794-8133898)
chr7 (123-163)||(8249697-8249737)
chr7 (127-163)||(10900070-10900106)
chr7 (136-246)||(28914856-28914968)
chr7 (124-176)||(32986339-32986391)
chr7 (171-246)||(4956071-4956146)
chr7 (131-229)||(29357801-29357899)
chr7 (131-162)||(38110246-38110277)
chr7 (122-228)||(46195909-46196016)
chr7 (132-228)||(6548709-6548805)
chr7 (131-164)||(9992610-9992643)
chr7 (123-160)||(28712360-28712397)
chr7 (125-192)||(19752973-19753040)
chr7 (127-163)||(25965742-25965778)
[»] chr8 (26 HSPs)
chr8 (124-239)||(17855643-17855758)
chr8 (131-246)||(39172192-39172307)
chr8 (122-228)||(41454824-41454931)
chr8 (122-228)||(32822107-32822213)
chr8 (129-246)||(10621354-10621472)
chr8 (125-228)||(1032564-1032668)
chr8 (135-246)||(19957300-19957412)
chr8 (122-231)||(41845423-41845533)
chr8 (123-246)||(44828411-44828536)
chr8 (124-234)||(19733060-19733171)
chr8 (120-210)||(23139063-23139154)
chr8 (122-228)||(38289232-38289339)
chr8 (124-162)||(13906690-13906728)
chr8 (120-162)||(30466668-30466710)
chr8 (122-246)||(38063968-38064093)
chr8 (123-246)||(4259851-4259975)
chr8 (130-228)||(11052581-11052680)
chr8 (124-162)||(10161957-10161995)
chr8 (128-228)||(22652680-22652781)
chr8 (195-231)||(11690948-11690984)
chr8 (124-164)||(31220337-31220377)
chr8 (195-238)||(8145838-8145881)
chr8 (121-163)||(40444695-40444737)
chr8 (132-162)||(43456716-43456746)
chr8 (128-228)||(10201259-10201360)
chr8 (122-162)||(29114093-29114133)
[»] chr6 (21 HSPs)
chr6 (135-246)||(7164699-7164810)
chr6 (123-246)||(6228239-6228363)
chr6 (120-246)||(4854285-4854412)
chr6 (143-226)||(9455852-9455935)
chr6 (124-246)||(18903346-18903469)
chr6 (153-249)||(32344662-32344758)
chr6 (124-162)||(15717077-15717115)
chr6 (126-163)||(17216953-17216990)
chr6 (125-228)||(20415559-20415663)
chr6 (124-192)||(24466825-24466893)
chr6 (195-246)||(5641669-5641720)
chr6 (172-228)||(11611411-11611467)
chr6 (122-162)||(18618603-18618643)
chr6 (130-162)||(24794959-24794991)
chr6 (124-228)||(14981699-14981804)
chr6 (128-159)||(25045737-25045768)
chr6 (128-169)||(4096621-4096661)
chr6 (125-162)||(21874285-21874322)
chr6 (127-160)||(30422174-30422207)
chr6 (123-228)||(9064858-9064964)
chr6 (134-162)||(19748102-19748130)
[»] chr1 (48 HSPs)
chr1 (124-231)||(35309718-35309825)
chr1 (140-246)||(2350354-2350460)
chr1 (135-246)||(19424050-19424162)
chr1 (124-246)||(34702292-34702415)
chr1 (122-246)||(43109217-43109342)
chr1 (131-246)||(22779223-22779339)
chr1 (125-228)||(24134621-24134725)
chr1 (127-246)||(7438617-7438737)
chr1 (122-246)||(12973257-12973382)
chr1 (124-228)||(50011500-50011605)
chr1 (122-228)||(8893851-8893958)
chr1 (126-248)||(17916702-17916821)
chr1 (124-246)||(29332279-29332400)
chr1 (122-228)||(44583579-44583685)
chr1 (122-163)||(39304266-39304307)
chr1 (131-246)||(35195590-35195706)
chr1 (127-246)||(40209894-40210014)
chr1 (127-238)||(46532482-46532594)
chr1 (124-246)||(4126892-4127015)
chr1 (121-249)||(25421844-25421974)
chr1 (124-246)||(49619965-49620088)
chr1 (124-162)||(27054683-27054721)
chr1 (122-162)||(2017748-2017788)
chr1 (124-246)||(24253622-24253745)
chr1 (124-159)||(35527568-35527603)
chr1 (127-162)||(47651868-47651903)
chr1 (128-246)||(10123032-10123150)
chr1 (124-162)||(15417881-15417919)
chr1 (124-162)||(15550879-15550917)
chr1 (124-162)||(35527399-35527437)
chr1 (120-162)||(50064999-50065041)
chr1 (181-246)||(52720735-52720800)
chr1 (127-226)||(23368731-23368831)
chr1 (124-246)||(40061436-40061559)
chr1 (131-163)||(40513237-40513269)
chr1 (127-246)||(48497192-48497312)
chr1 (125-160)||(16985992-16986027)
chr1 (124-163)||(48813727-48813766)
chr1 (122-160)||(4684243-4684281)
chr1 (127-228)||(14262718-14262820)
chr1 (124-162)||(22386300-22386338)
chr1 (130-246)||(30735827-30735944)
chr1 (125-202)||(35605618-35605695)
chr1 (181-231)||(47428889-47428939)
chr1 (122-163)||(2465996-2466037)
chr1 (122-228)||(39238707-39238814)
chr1 (150-246)||(42946446-42946543)
chr1 (131-219)||(52426891-52426979)
[»] chr5 (21 HSPs)
chr5 (122-246)||(38503236-38503361)
chr5 (125-228)||(31250141-31250245)
chr5 (131-246)||(20191442-20191557)
chr5 (125-228)||(43227860-43227964)
chr5 (140-246)||(34729481-34729587)
chr5 (124-228)||(4395848-4395953)
chr5 (121-246)||(3294073-3294199)
chr5 (123-246)||(15470600-15470724)
chr5 (195-246)||(15680880-15680931)
chr5 (124-162)||(12375476-12375514)
chr5 (121-162)||(87781-87822)
chr5 (124-188)||(31991798-31991863)
chr5 (122-162)||(1984253-1984293)
chr5 (130-162)||(17077360-17077392)
chr5 (123-162)||(43263205-43263244)
chr5 (124-162)||(13576316-13576354)
chr5 (181-234)||(38435970-38436023)
chr5 (131-163)||(1931840-1931872)
chr5 (174-214)||(2058264-2058304)
chr5 (202-246)||(12256475-12256519)
chr5 (127-159)||(42208913-42208945)
[»] scaffold0001 (1 HSPs)
scaffold0001 (124-246)||(419705-419828)
[»] scaffold0054 (1 HSPs)
scaffold0054 (134-247)||(22462-22576)
[»] scaffold0018 (1 HSPs)
scaffold0018 (124-162)||(121863-121901)
[»] scaffold0011 (1 HSPs)
scaffold0011 (147-231)||(15325-15409)
[»] scaffold0308 (1 HSPs)
scaffold0308 (124-228)||(7069-7174)


Alignment Details
Target: chr3 (Bit Score: 337; Significance: 0; HSPs: 43)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 337; E-Value: 0
Query Start/End: Original strand, 18 - 523
Target Start/End: Original strand, 50271617 - 50272133
Alignment:
Q  18 atttcaagtatcgagagataatttatgtgtcaaagacnnnnnnnactaacaaagggcataaacatgactatgttaaaattttgatacatttaaagactac 117  Q
    ||||||||||| ||||||| ||||||| |||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50271617 atttcaagtattgagagattatttatgagtcaaagactttttttactaacaaagggcataaacatgactatgttaaaattttgatacatttaaagactac 50271716  T
Q  118 gtaattgtccccatgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaa 217  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||  |||| |||| ||||||||||||||    
T  50271717 gtaattgtccccatgagcttagctcatttggtaagagataatgcatttgtatgcaggggccgtggttcgaaccccgtacatcccacttattcacctttaa 50271816  T
Q  218 tgtgaatttctttaaccgctagactacttaactnnnnnnnnncctatcataactactgcttatatattcaagatgaaaatgactattaaccctnnnnnnn 317  Q
     |||||||||| ||||||||||||||||| |||           ||||||||||| |||||||||||||  ||||||||||||||||||||||           
T  50271817 ggtgaatttctctaaccgctagactacttgactgaaaaaaaaaatatcataactaatgcttatatattccggatgaaaatgactattaaccctcaaaaaa 50271916  T
Q  318 gtgttgcttcttct------gtctatgtggaaccccaccaccttcaaaacaaaaacgcataaaccatacacatcatcgattctcacctacaaaatttggt 411  Q
    ||||||||||||||      ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50271917 gtgttgcttcttctgtttctgtctatgtggaaccccaccaccttcaaaacaaaaacgcataaaccatacacatcatcgattctcacctacaaaatttggt 50272016  T
Q  412 acattacctggaccggttattattagtacaactttatttattatcatacatgacatgaatgaatata-----cattgcatacatgtaacattgggagtat 506  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     ||||||||||||||||||||||||||||    
T  50272017 acattacctggaccggttattattagtacaactttatttattatcatacatgacatgaatgaatatacattgcattgcatacatgtaacattgggagtat 50272116  T
Q  507 atataaagcaccctatg 523  Q
    |||||||||||||||||    
T  50272117 atataaagcaccctatg 50272133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 124 - 238
Target Start/End: Original strand, 49429454 - 49429568
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaa 223  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||| ||  |||||||||||   |||||||| |||||||||||||| |||||    
T  49429454 gtccccatgagcttaactcatttggtaagggataatgcatttgtatgcagggaccagggttcgaaccccggacaccccacttattcacctttaaggtgaa 49429553  T
Q  224 tttctttaaccgcta 238  Q
    ||||| || ||||||    
T  49429554 tttctctagccgcta 49429568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 123 - 246
Target Start/End: Original strand, 166780 - 166904
Alignment:
Q  123 tgtccccatgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtg 221  Q
    ||||||| ||||||||||||| |||||||||||||||||||  | ||| ||||||||| ||||||||||| | ||||| || |||||||||||||| |||    
T  166780 tgtccccgtgagcttagctcacttggtaagggataatgcataatttatgcaggggccggggttcgaaccccagacacctcacttattcacctttaaagtg 166879  T
Q  222 aatttctttaaccgctagactactt 246  Q
    |||||||||| ||||||| ||||||    
T  166880 aatttctttagccgctaggctactt 166904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 125 - 246
Target Start/End: Original strand, 27394502 - 27394623
Alignment:
Q  125 tccccatgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaat 224  Q
    ||||| |||||| |||||| ||||||||||||||||||||| ||| ||||||| | |||| ||||||   |||||||| |||||||||||||| ||||||    
T  27394502 tccccgtgagctaagctcacttggtaagggataatgcatttatatgcaggggctggggtttgaaccccggacaccccacttattcacctttaaggtgaat 27394601  T
Q  225 ttctttaaccgctagactactt 246  Q
    |||| || ||||||| ||||||    
T  27394602 ttctctagccgctaggctactt 27394623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 122 - 246
Target Start/End: Complemental strand, 33528309 - 33528184
Alignment:
Q  122 ttgtccccatgagcttagctcatttggtaagggataatgc---atttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaat 218  Q
    ||||||||||||||||||||||||||||||||||||||||   |||||  | ||||||| | ||||||||||| | |||||||| ||||||| ||||||     
T  33528309 ttgtccccatgagcttagctcatttggtaagggataatgcacaatttg--tgcaggggctggggttcgaaccccagacaccccacttattcatctttaag 33528212  T
Q  219 gtgaatttctttaaccgctagactactt 246  Q
    |||||||||| || || |||| ||||||    
T  33528211 gtgaatttctctagccactaggctactt 33528184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 124 - 249
Target Start/End: Original strand, 45431620 - 45431746
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 222  Q
    |||||||||||||||||||| ||||||||||||||||| | || ||| |||||| |  |||||||||||   |||||||| |||||||||||||| ||||    
T  45431620 gtccccatgagcttagctcacttggtaagggataatgcgtattttatgcaggggtcagggttcgaaccccggacaccccacttattcacctttaaggtga 45431719  T
Q  223 atttctttaaccgctagactacttaac 249  Q
    |||||  || ||||||| |||||||||    
T  45431720 atttccctagccgctaggctacttaac 45431746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 120 - 228
Target Start/End: Original strand, 29226315 - 29226424
Alignment:
Q  120 aattgtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaat 218  Q
    |||| ||||||||||||||||||||||||||||||||||  ||   | | | ||||||||| |||||||||||  ||||||||| ||||||| ||||||     
T  29226315 aattatccccatgagcttagctcatttggtaagggataacacacaatatgtgcaggggccggggttcgaaccccgtacaccccacttattcatctttaag 29226414  T
Q  219 gtgaatttct 228  Q
    ||||||||||    
T  29226415 gtgaatttct 29226424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 123 - 246
Target Start/End: Original strand, 11483605 - 11483729
Alignment:
Q  123 tgtccccatgagcttagctcatttggtaagggataatgc-atttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtg 221  Q
    ||||||||||||||||||||||||||||||||||||||| |  | | | ||||||||  ||||||||| |   |||||||| ||||||| |||||| |||    
T  11483605 tgtccccatgagcttagctcatttggtaagggataatgcaaaatatgtgcaggggccagggttcgaactccggacaccccacttattcatctttaaggtg 11483704  T
Q  222 aatttctttaaccgctagactactt 246  Q
    ||||||| || |  |||||||||||    
T  11483705 aatttctctagcaactagactactt 11483729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 118 - 228
Target Start/End: Original strand, 50381701 - 50381812
Alignment:
Q  118 gtaattgtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcaccttta 216  Q
    |||| |||||||||||||||| |||||||||||||||||||||||   | ||| |||||| || |||||||| ||   |||||||| ||||||| |||||    
T  50381701 gtaaatgtccccatgagcttaactcatttggtaagggataatgcacaatatatgcaggggtcggggttcgaatcccggacaccccacttattcatcttta 50381800  T
Q  217 atgtgaatttct 228  Q
    | ||||||||||    
T  50381801 aggtgaatttct 50381812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 121 - 246
Target Start/End: Complemental strand, 50676972 - 50676846
Alignment:
Q  121 attgtccccatgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatg 219  Q
    |||||| ||||||| ||| |||| ||||||||||| ||| ||| || |||  |||||  | |||||||||||   |||||||| |||||||||||||| |    
T  50676972 attgtctccatgagtttaactcacttggtaagggacaatacatattatatgtaggggttggggttcgaaccccgaacaccccacttattcacctttaagg 50676873  T
Q  220 tgaatttctttaaccgctagactactt 246  Q
    ||||||||| ||||| |||||||||||    
T  50676872 tgaatttctctaaccactagactactt 50676846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 135 - 246
Target Start/End: Complemental strand, 1102787 - 1102675
Alignment:
Q  135 cttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaac 233  Q
    |||||||||  ||||||||||||||||||  | ||| |||||| ||  ||||||||| |  |||||||| |||||||||||||| |||||||||| || |    
T  1102787 cttagctcacctggtaagggataatgcataatttatgcaggggacggagttcgaaccatggacaccccacttattcacctttaaggtgaatttctctagc 1102688  T
Q  234 cgctagactactt 246  Q
    |||||| ||||||    
T  1102687 cgctaggctactt 1102675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 46247253 - 46247361
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgc---atttgtatccaggggccgtggttcgaaccctatacacccca---tttattcacctttaa 217  Q
    ||||||||||||||||||||||||||||||||||||||   |||||  | ||||||| | ||||||||||| | ||||||||    ||||||| ||||||    
T  46247253 gtccccatgagcttagctcatttggtaagggataatgcacaatttg--tgcaggggctggggttcgaaccccagacaccccacttcttattcatctttaa 46247350  T
Q  218 tgtgaatttct 228  Q
     ||||||||||    
T  46247351 ggtgaatttct 46247361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 124 - 246
Target Start/End: Original strand, 46798575 - 46798698
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 222  Q
    ||||||||||||||| |||||||||| ||||||||||||   | | | ||||||||| | ||||||||||  |||||||| ||||||| |||||| ||      
T  46798575 gtccccatgagcttaactcatttggtgagggataatgcacaatatgtgcaggggccgggattcgaaccctggacaccccacttattcatctttaaggtag 46798674  T
Q  223 atttctttaaccgctagactactt 246  Q
    |||||| ||||| |||| ||||||    
T  46798675 atttctctaaccactaggctactt 46798698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 124 - 162
Target Start/End: Original strand, 2259150 - 2259188
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgca 162  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2259150 gtccccatgagcttagctcatttggtaagggataatgca 2259188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 121 - 238
Target Start/End: Original strand, 9489467 - 9489585
Alignment:
Q  121 attgtccccatgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatg 219  Q
    ||||||| | |||| |||||||  |||||||||||||||||||| ||||| ||||||||| ||||||||||||  | |||| | |  |||||||||||      
T  9489467 attgtcctcgtgagtttagctcgcttggtaagggataatgcattatgtatgcaggggccggggttcgaaccctggataccctactatttcacctttaaga 9489566  T
Q  220 tgaatttctttaaccgcta 238  Q
    ||||||||| | |||||||    
T  9489567 tgaatttctctgaccgcta 9489585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 124 - 162
Target Start/End: Original strand, 30162650 - 30162688
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgca 162  Q
    |||||||||||||||||||||||||||||||||||||||    
T  30162650 gtccccatgagcttagctcatttggtaagggataatgca 30162688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 137 - 246
Target Start/End: Complemental strand, 37756502 - 37756392
Alignment:
Q  137 tagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccg 235  Q
    ||||||| ||| |||||||||||||||  | ||| ||||||| | ||||||||||| | |||||||| |||||||||||||| |||| ||||| |  |||    
T  37756502 tagctcacttgataagggataatgcataatttatgcaggggctggggttcgaaccccaaacaccccacttattcacctttaacgtgagtttctctcgccg 37756403  T
Q  236 ctagactactt 246  Q
    |||| ||||||    
T  37756402 ctaggctactt 37756392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 25165434 - 25165471
Alignment:
Q  125 tccccatgagcttagctcatttggtaagggataatgca 162  Q
    ||||||||||||||||||||||||||||||||||||||    
T  25165434 tccccatgagcttagctcatttggtaagggataatgca 25165471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 126 - 246
Target Start/End: Original strand, 47864631 - 47864752
Alignment:
Q  126 ccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaat 224  Q
    |||||| ||||||||||||||||||||||||||||||   | | | ||||||  | |||||||||||   |||||||| ||||||| |||||| ||||||    
T  47864631 ccccataagcttagctcatttggtaagggataatgcacaatatgtgcaggggttggggttcgaaccccggacaccccacttattcatctttaaggtgaat 47864730  T
Q  225 ttctttaaccgctagactactt 246  Q
    |||| || || |||| ||||||    
T  47864731 ttctctagccactaggctactt 47864752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 246
Target Start/End: Complemental strand, 27817169 - 27817047
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgc---atttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgt 220  Q
    ||||| ||||||||| ||||||||||||||||||||||   |||||  | |||||||||  ||||||||||   |||||||||||||||| ||||||  |    
T  27817169 gtccctatgagcttacctcatttggtaagggataatgcacaatttg--tgcaggggccggagttcgaaccc-ggacaccccatttattcatctttaagtt 27817073  T
Q  221 gaatttctttaaccgctagactactt 246  Q
    |||||||| || || |||| ||||||    
T  27817072 gaatttctctagccactaggctactt 27817047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 131 - 246
Target Start/End: Original strand, 38414884 - 38414999
Alignment:
Q  131 tgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctt 229  Q
    |||||||||| || ||||||||||||||||||| || ||| |||||| |  |||| |||| ||  |||||||| |||||||||||||| ||||||||||     
T  38414884 tgagcttagc-cacttggtaagggataatgcatattatatgcaggggtcagggtttgaactctgaacaccccacttattcacctttaaggtgaatttctc 38414982  T
Q  230 taaccgctagactactt 246  Q
    |  ||||||| ||||||    
T  38414983 tggccgctaggctactt 38414999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 127 - 246
Target Start/End: Original strand, 39739270 - 39739390
Alignment:
Q  127 cccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatt 225  Q
    ||||||||||||||||||||||||||||||||||||   | | | |||||   | |||||||||||   ||||| || ||||||| |||||| |||||||    
T  39739270 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcagggattggggttcgaaccccggacacctcacttattcatctttaaggtgaatt 39739369  T
Q  226 tctttaaccgctagactactt 246  Q
    ||| || || |||||||||||    
T  39739370 tctctagccactagactactt 39739390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 188
Target Start/End: Original strand, 43527815 - 43527867
Alignment:
Q  136 ttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaa 188  Q
    |||||||||||||||||||||||||||||||||| || || ||| ||||||||    
T  43527815 ttagctcatttggtaagggataatgcatttgtatgcacggaccggggttcgaa 43527867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 29645881 - 29645806
Alignment:
Q  171 caggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgctagactactt 246  Q
    ||||||||| |||||||||||   |||||||| ||||||| |||||| |||||||||| || || |||||||||||    
T  29645881 caggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaatttctctagccactagactactt 29645806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 124 - 163
Target Start/End: Original strand, 32421341 - 32421380
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgcat 163  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  32421341 gtccccatgagcttagctcatctggtaagggataatgcat 32421380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 162
Target Start/End: Original strand, 34225187 - 34225226
Alignment:
Q  123 tgtccccatgagcttagctcatttggtaagggataatgca 162  Q
    |||| |||||||||||||||||||||||||||||||||||    
T  34225187 tgtctccatgagcttagctcatttggtaagggataatgca 34225226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 140 - 246
Target Start/End: Original strand, 48717422 - 48717529
Alignment:
Q  140 ctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgcta 238  Q
    |||||||||||||| ||||| |||| ||||| ||||||  | ||||||||||| | |||||||| || |||| |||||| ||||||||||  | ||||||    
T  48717422 ctcatttggtaaggaataatacattatgtatgcaggggtaggggttcgaaccccaaacaccccactttttcatctttaaggtgaatttctccagccgcta 48717521  T
Q  239 gactactt 246  Q
     |||||||    
T  48717522 aactactt 48717529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 195 - 246
Target Start/End: Original strand, 54457218 - 54457269
Alignment:
Q  195 acaccccatttattcacctttaatgtgaatttctttaaccgctagactactt 246  Q
    ||||||||||||||||||||||| |||||||||| || ||||||| ||||||    
T  54457218 acaccccatttattcacctttaaggtgaatttctctagccgctaggctactt 54457269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 162
Target Start/End: Original strand, 55426107 - 55426145
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgca 162  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  55426107 gtccccatgagcttagctcatttggtaaaggataatgca 55426145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 160
Target Start/End: Original strand, 36590383 - 36590419
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatg 160  Q
    ||||||||||| |||||||||||||||||||||||||    
T  36590383 gtccccatgagattagctcatttggtaagggataatg 36590419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 182 - 246
Target Start/End: Original strand, 43897654 - 43897718
Alignment:
Q  182 gttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgctagactactt 246  Q
    |||||||||  | |||||||| |||||||||||||| |||||||||| |||||| ||| ||||||    
T  43897654 gttcgaacctcagacaccccacttattcacctttaaggtgaatttctctaaccgttaggctactt 43897718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 246
Target Start/End: Complemental strand, 8931007 - 8930956
Alignment:
Q  195 acaccccatttattcacctttaatgtgaatttctttaaccgctagactactt 246  Q
    |||||||| |||||||||||||| |||||||||| || ||||||| ||||||    
T  8931007 acaccccacttattcacctttaaagtgaatttctctagccgctaggctactt 8930956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 140 - 243
Target Start/End: Original strand, 24651134 - 24651237
Alignment:
Q  140 ctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgctag 239  Q
    |||| ||||||| ||||||||| | | ||| || ||| || | ||||||||| | | ||| || |||||||||||||| |||||||||| |||||||| |    
T  24651134 ctcacttggtaaaggataatgcgtatatatgcaagggtcgagattcgaaccccagatacctcacttattcacctttaaggtgaatttctctaaccgctgg 24651233  T
Q  240 acta 243  Q
    ||||    
T  24651234 acta 24651237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 119 - 157
Target Start/End: Original strand, 7239794 - 7239832
Alignment:
Q  119 taattgtccccatgagcttagctcatttggtaagggata 157  Q
    ||||||||||| ||||||||| |||||||||||||||||    
T  7239794 taattgtccccgtgagcttagttcatttggtaagggata 7239832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 121 - 228
Target Start/End: Original strand, 9624973 - 9625081
Alignment:
Q  121 attgtccccatgagcttagctcatttggtaagggataatgcatt--tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaat 218  Q
    ||||||||| ||||| ||||||| |||| | |||| ||||||||  | ||| ||||||||| |||||||||||   |||||||| |||||||| || ||     
T  9624973 attgtccccgtgagcatagctcagttggca-gggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcactttaaaa 9625071  T
Q  219 gtgaatttct 228  Q
    ||||||||||    
T  9625072 gtgaatttct 9625081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 7517934 - 7517971
Alignment:
Q  125 tccccatgagcttagctcatttggtaagggataatgca 162  Q
    ||||||| ||||||||||||||||||||||||| ||||    
T  7517934 tccccattagcttagctcatttggtaagggatattgca 7517971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 27183785 - 27183678
Alignment:
Q  122 ttgtccccatgagcttagctcatttggtaagggataatgcatt--tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatg 219  Q
    |||||||| ||||| ||||||| |||| | |||| ||||||||  | ||| ||||||||| |||||||||||   |||||||| |||||||| || || |    
T  27183785 ttgtccccgtgagcatagctcagttggca-gggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcactttaaaag 27183687  T
Q  220 tgaatttct 228  Q
    |||||||||    
T  27183686 tgaatttct 27183678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 172 - 229
Target Start/End: Original strand, 31419625 - 31419682
Alignment:
Q  172 aggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctt 229  Q
    |||||| | ||||||||||| | |||||||| ||||||||||| || |||||||||||    
T  31419625 aggggctggggttcgaaccccaaacaccccacttattcaccttaaaagtgaatttctt 31419682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 246
Target Start/End: Original strand, 40412294 - 40412383
Alignment:
Q  157 aatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgctagactactt 246  Q
    ||||||||| ||| ||| || || |||||||||  |  ||| |||| |||||||||||||| |||||||||| |||||| |||| |||||    
T  40412294 aatgcatttatatgcagaggtcggggttcgaactttggacatcccacttattcacctttaaagtgaatttctctaaccgttagagtactt 40412383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 205
Target Start/End: Complemental strand, 46796001 - 46795921
Alignment:
Q  125 tccccatgagcttagctcatttggtaagggataatgcatttg-tatccaggggccgtggttcgaaccctatacaccccattt 205  Q
    ||||| ||||||||||||| |||||| |||||| |||||||  ||| ||||||||| ||||||||||||  |||| ||||||    
T  46796001 tccccgtgagcttagctcagttggta-gggatattgcattttatatgcaggggccggggttcgaaccctgaacactccattt 46795921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 124 - 160
Target Start/End: Complemental strand, 1084130 - 1084094
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatg 160  Q
    |||||||||||||||||||||||| ||| ||||||||    
T  1084130 gtccccatgagcttagctcatttgttaaaggataatg 1084094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 198 - 246
Target Start/End: Complemental strand, 1325358 - 1325310
Alignment:
Q  198 ccccatttattcacctttaatgtgaatttctttaaccgctagactactt 246  Q
    ||||||||||||| ||||||  |||||||||||| || |||||||||||    
T  1325358 ccccatttattcatctttaagatgaatttctttagccactagactactt 1325310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 124 - 191
Target Start/End: Original strand, 45118637 - 45118704
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccc 191  Q
    |||||||||||||||||||| ||||| ||||| | |||||| | ||| ||||||||| |||||||||||    
T  45118637 gtccccatgagcttagctcagttggt-agggacattgcattatatatgcaggggccggggttcgaaccc 45118704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 4e-33; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 43684272 - 43684376
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaa 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| | |||||||||||   |||||||| |||||||||||||| |||||    
T  43684272 gtccccatgagcttagctcatttggtaagggataatgcatttgtatgcaggggctgaggttcgaaccccgaacaccccacttattcacctttaaggtgaa 43684371  T
Q  224 tttct 228  Q
    |||||    
T  43684372 tttct 43684376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 24202143 - 24202248
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 222  Q
    |||||| ||||||||||||| |||||||||||||||||||| ||||| ||||||||| |||||||||||   |||||||| |  ||||||||||| ||||    
T  24202143 gtccccgtgagcttagctcacttggtaagggataatgcattatgtatgcaggggccggggttcgaaccccggacaccccactatttcacctttaaggtga 24202242  T
Q  223 atttct 228  Q
    ||||||    
T  24202243 atttct 24202248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 125 - 246
Target Start/End: Original strand, 43027149 - 43027271
Alignment:
Q  125 tccccatgagcttagctcatttggtaagggataatgca---tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtg 221  Q
    ||||||||||||||||||||||| ||||||||||||||   |||||   | || || | ||||||||||| | ||||||||||||||||||||||| |||    
T  43027149 tccccatgagcttagctcatttgataagggataatgcacaatttgtg--cgggtgctgaggttcgaaccccagacaccccatttattcacctttaaggtg 43027246  T
Q  222 aatttctttaaccgctagactactt 246  Q
    ||||||| || || |||||||||||    
T  43027247 aatttctctagccactagactactt 43027271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 145 - 246
Target Start/End: Complemental strand, 37886305 - 37886204
Alignment:
Q  145 ttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgctagactac 244  Q
    ||||||||||||||||||||| |||  ||| ||   ||||||||||||  |||||||| |||||||||||||| |||||||||| |||||| ||||||||    
T  37886305 ttggtaagggataatgcatttatatgtaggagctagggttcgaaccctggacaccccacttattcacctttaaggtgaatttctctaaccgttagactac 37886206  T
Q  245 tt 246  Q
    ||    
T  37886205 tt 37886204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 126 - 246
Target Start/End: Original strand, 29090411 - 29090531
Alignment:
Q  126 ccccatgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatt 225  Q
    |||| |||||||||||||| || ||||||||||||||||| ||| |||||||||  ||||||||||   ||||| || ||||||| |||||| |||||||    
T  29090411 ccccttgagcttagctcatatgataagggataatgcatttatatacaggggccggagttcgaaccccggacacctcacttattcatctttaaggtgaatt 29090510  T
Q  226 tctttaaccgctagactactt 246  Q
    |||  | ||||||| ||||||    
T  29090511 tctccagccgctaggctactt 29090531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 140 - 246
Target Start/End: Original strand, 42541165 - 42541271
Alignment:
Q  140 ctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgctag 239  Q
    |||| |||||||||||||||| || | ||| ||||||| | ||||||||||| | |||||||| ||| |||||||||| |||||||||| || |||||||    
T  42541165 ctcacttggtaagggataatggatatttatgcaggggctggggttcgaaccccagacaccccacttactcacctttaaggtgaatttctctagccgctag 42541264  T
Q  240 actactt 246  Q
     ||||||    
T  42541265 gctactt 42541271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 124 - 167
Target Start/End: Complemental strand, 41541617 - 41541574
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgcatttgt 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  41541617 gtccccatgagcttagctcatttggtaagggataatgcatttgt 41541574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 246
Target Start/End: Complemental strand, 18949783 - 18949664
Alignment:
Q  127 cccatgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatt 225  Q
    |||||||||||| |||||||| ||| |||||||||||| | | | |||||| || ||||||||||||  |||||| | |||||||  |||||||||||||    
T  18949783 cccatgagcttaactcatttgataacggataatgcattatatgtgcaggggtcggggttcgaaccctgaacacccaacttattca-ttttaatgtgaatt 18949685  T
Q  226 tctttaaccgctagactactt 246  Q
    ||| || || |||||||||||    
T  18949684 tctctagccactagactactt 18949664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 120 - 246
Target Start/End: Complemental strand, 27463632 - 27463506
Alignment:
Q  120 aattgtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaat 218  Q
    ||||||| |||||||||||||||||||||||||| ||||||||   | ||| |||| |||| | ||||||||| | | | |||| ||||||| ||||||     
T  27463632 aattgtctccatgagcttagctcatttggtaaggaataatgcacaatatatgcaggagccgggattcgaaccc-agataacccacttattcatctttaaa 27463534  T
Q  219 gtgaatttctttaaccgctagactactt 246  Q
    |||||||||| ||||| ||||| |||||    
T  27463533 gtgaatttctctaaccactagattactt 27463506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 125 - 234
Target Start/End: Complemental strand, 33482743 - 33482633
Alignment:
Q  125 tccccatgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaa 223  Q
    ||||||||| ||||||||||||||||||| || |||||   | ||| ||||| ||||||||||||||  | |||||||| ||||||| ||||||  ||||    
T  33482743 tccccatgaacttagctcatttggtaaggaatgatgcacaatatatgcagggaccgtggttcgaacctcagacaccccacttattcatctttaagatgaa 33482644  T
Q  224 tttctttaacc 234  Q
    ||||| |||||    
T  33482643 tttctctaacc 33482633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 20375586 - 20375691
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 222  Q
    |||||| ||||||||||||| ||||||||||||| ||| | || ||| ||||| ||| ||||||||||  | |||| ||| ||||||| |||||| ||||    
T  20375586 gtccccgtgagcttagctcacttggtaagggatattgcctattttatgcagggtccggggttcgaacctcagacacgccacttattcatctttaaggtga 20375685  T
Q  223 atttct 228  Q
    ||||||    
T  20375686 atttct 20375691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 127 - 191
Target Start/End: Original strand, 32084841 - 32084906
Alignment:
Q  127 cccatgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccc 191  Q
    ||||||||||||||||||||||||||||| ||||||| || |||  |||||||| |||||||||||    
T  32084841 cccatgagcttagctcatttggtaagggacaatgcatattatatgtaggggccggggttcgaaccc 32084906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 182 - 246
Target Start/End: Complemental strand, 37592265 - 37592201
Alignment:
Q  182 gttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgctagactactt 246  Q
    |||||||||| | |||||||| ||||| |||||||| |||||||||| || ||||||||||||||    
T  37592265 gttcgaaccccagacaccccacttatttacctttaaggtgaatttctctagccgctagactactt 37592201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 183 - 246
Target Start/End: Original strand, 5207145 - 5207208
Alignment:
Q  183 ttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgctagactactt 246  Q
    ||||||||| | |||||||| ||||||||||||||  |||||||||||| || |||||||||||    
T  5207145 ttcgaaccccagacaccccacttattcacctttaagatgaatttctttagccactagactactt 5207208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 119 - 162
Target Start/End: Original strand, 34107483 - 34107526
Alignment:
Q  119 taattgtccccatgagcttagctcatttggtaagggataatgca 162  Q
    |||| ||||| |||||||||||||||||||||||||||||||||    
T  34107483 taatcgtccctatgagcttagctcatttggtaagggataatgca 34107526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 125 - 164
Target Start/End: Complemental strand, 38790182 - 38790143
Alignment:
Q  125 tccccatgagcttagctcatttggtaagggataatgcatt 164  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  38790182 tccccgtgagcttagctcatttggtaagggataatgcatt 38790143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 162
Target Start/End: Original strand, 16403522 - 16403556
Alignment:
Q  128 ccatgagcttagctcatttggtaagggataatgca 162  Q
    |||||||||||||||||||||||||||||||||||    
T  16403522 ccatgagcttagctcatttggtaagggataatgca 16403556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 162
Target Start/End: Original strand, 41749936 - 41749978
Alignment:
Q  120 aattgtccccatgagcttagctcatttggtaagggataatgca 162  Q
    ||||||||||||||||| ||||||||||| |||||||||||||    
T  41749936 aattgtccccatgagctaagctcatttggcaagggataatgca 41749978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 20435774 - 20435879
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 222  Q
    |||||| ||||||||||||| ||||||||||||| ||||| || ||| || || ||| ||||||||||    ||| |||| ||||||| |||||| ||||    
T  20435774 gtccccgtgagcttagctcacttggtaagggatattgcatattttatgcaaggcccggggttcgaacctcggacatcccacttattcatctttaaggtga 20435873  T
Q  223 atttct 228  Q
    ||||||    
T  20435874 atttct 20435879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 131 - 228
Target Start/End: Complemental strand, 25783308 - 25783211
Alignment:
Q  131 tgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttct 228  Q
    ||||||||||||| ||||| ||||||||||||| | ||| ||||||    ||||||||||||  |||||||| ||||||| ||| || ||||| ||||    
T  25783308 tgagcttagctcacttggtgagggataatgcatatatatgcaggggttagggttcgaaccctggacaccccacttattcatcttcaaggtgaagttct 25783211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 31149202 - 31149165
Alignment:
Q  125 tccccatgagcttagctcatttggtaagggataatgca 162  Q
    ||||||||||| ||||||||||||||||||||||||||    
T  31149202 tccccatgagcatagctcatttggtaagggataatgca 31149165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 135 - 225
Target Start/End: Original strand, 1962830 - 1962921
Alignment:
Q  135 cttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatt 225  Q
    |||| |||| ||||||| ||||||||||| |||||| |||||| || ||||||||| |   |||||||| ||||||| |||||| |||||||    
T  1962830 cttaactcacttggtaaaggataatgcatattgtatgcaggggtcgaggttcgaactccggacaccccacttattcatctttaaggtgaatt 1962921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 162
Target Start/End: Complemental strand, 11069448 - 11069409
Alignment:
Q  123 tgtccccatgagcttagctcatttggtaagggataatgca 162  Q
    ||||| ||||||||||||||||||||||||| ||||||||    
T  11069448 tgtccgcatgagcttagctcatttggtaaggaataatgca 11069409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 246
Target Start/End: Complemental strand, 12183837 - 12183714
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 222  Q
    |||||||||| |||| |||| ||||||||| |||||||||| ||||| |||||| || | ||||||| | | ||| |||| |  || |||||||| ||||    
T  12183837 gtccccatgaacttacctcacttggtaaggaataatgcattatgtatgcaggggtcgggattcgaactccagacatcccactattttacctttaaggtga 12183738  T
Q  223 atttctttaaccgctagactactt 246  Q
    ||||||   | |||||||||||||    
T  12183737 atttctccgatcgctagactactt 12183714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 246
Target Start/End: Original strand, 31605499 - 31605614
Alignment:
Q  131 tgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttcttt 230  Q
    |||||||| |||| || |||||||||||||||| | ||| |||||  || ||||||||||  | ||||   |||||||||| |||||  ||||||||| |    
T  31605499 tgagcttaactcacttagtaagggataatgcatatatatgcagggaacggggttcgaacctcagacactttatttattcacatttaagatgaatttctct 31605598  T
Q  231 aaccgctagactactt 246  Q
    | || |||||||||||    
T  31605599 acccactagactactt 31605614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 25553247 - 25553209
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgca 162  Q
    |||||||||||||||  ||||||||||||||||||||||    
T  25553247 gtccccatgagcttaattcatttggtaagggataatgca 25553209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 121 - 249
Target Start/End: Complemental strand, 19843468 - 19843339
Alignment:
Q  121 attgtccccatgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatg 219  Q
    ||||||| |||||||||| ||||||| ||||||||| ||| |   | | | |||||| |  ||||||||||||| ||||| || ||||||| |||||| |    
T  19843468 attgtcctcatgagcttaactcatttcgtaagggatgatgtacaatatgtgcaggggtcagggttcgaaccctagacacctcacttattcatctttaagg 19843369  T
Q  220 tgaatttctttaaccgctagactacttaac 249  Q
    ||||||||| || |  |||| |||||||||    
T  19843368 tgaatttctctagctactaggctacttaac 19843339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 130 - 246
Target Start/End: Complemental strand, 33065353 - 33065236
Alignment:
Q  130 atgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttct 228  Q
    ||||||||||||||||||| |||||||||||||   ||| |  ||||| || ||||||||| |   |||||| | ||||||| |||||| ||||||||||    
T  33065353 atgagcttagctcatttggcaagggataatgcacaatgtgtgtaggggtcggggttcgaactccgaacaccctacttattcatctttaaggtgaatttct 33065254  T
Q  229 ttaaccgctagactactt 246  Q
     || || |||| ||||||    
T  33065253 ctagccactaggctactt 33065236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 123 - 228
Target Start/End: Original strand, 29034968 - 29035074
Alignment:
Q  123 tgtccccatgagcttagctcatttggtaagggataatgcatt--tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgt 220  Q
    ||||||| ||||| ||||||| |||| | |||| ||||||||  | ||| ||||||||| |||||||||||   |||||||| |||||||| || || ||    
T  29034968 tgtccccgtgagcatagctcacttggca-gggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcactttaaaagt 29035066  T
Q  221 gaatttct 228  Q
    ||||||||    
T  29035067 gaatttct 29035074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 124 - 160
Target Start/End: Complemental strand, 40203381 - 40203345
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatg 160  Q
    |||| ||||||||||||||||| ||||||||||||||    
T  40203381 gtcctcatgagcttagctcattcggtaagggataatg 40203345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 6e-32; HSPs: 36)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 124 - 246
Target Start/End: Original strand, 37574266 - 37574388
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaa 223  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||| |||||    ||||||| |||||||||||||| |||||    
T  37574266 gtccccatgagcttagctcatttggtaagggataatgcatttgtatgcaggggccggggttcaaaccccgggcaccccacttattcacctttaaggtgaa 37574365  T
Q  224 tttctttaaccgctagactactt 246  Q
    ||||| || || |||| ||||||    
T  37574366 tttctctagccactaggctactt 37574388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 125 - 249
Target Start/End: Original strand, 38690660 - 38690785
Alignment:
Q  125 tccccatgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaa 223  Q
    ||||||||||||||||||| ||||||||||||||||||| || ||| |||||| || |||||||||||   |||||||| |||||| ||||||| |||||    
T  38690660 tccccatgagcttagctcacttggtaagggataatgcatattatatgcaggggtcggggttcgaaccccggacaccccacttattctcctttaaggtgaa 38690759  T
Q  224 tttctttaaccgctagactacttaac 249  Q
    ||||| || ||||||| |||||||||    
T  38690760 tttctctagccgctaggctacttaac 38690785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 246
Target Start/End: Original strand, 16556447 - 16556567
Alignment:
Q  127 cccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatt 225  Q
    ||||||||||||||||||||||||||||||||||||   | | | |||||| || |||||||||||   |||||||| ||||||| |||||| |||||||    
T  16556447 cccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggtcggggttcgaaccccgaacaccccacttattcatctttaaggtgaatt 16556546  T
Q  226 tctttaaccgctagactactt 246  Q
    ||| || || |||| ||||||    
T  16556547 tctctagccactaggctactt 16556567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 131 - 246
Target Start/End: Complemental strand, 13539933 - 13539819
Alignment:
Q  131 tgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttcttt 230  Q
    ||||||||||||| ||||||||||||||||||| | ||| ||||| |   ||||||||||| | ||||| |||||||||||| |||| |||||||||| |    
T  13539933 tgagcttagctcacttggtaagggataatgcatatttatgcagggactagggttcgaaccccaaacacctcatttattcacc-ttaaggtgaatttctct 13539835  T
Q  231 aaccgctagactactt 246  Q
      ||||||| ||||||    
T  13539834 ggccgctaggctactt 13539819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 122 - 217
Target Start/End: Original strand, 34974693 - 34974788
Alignment:
Q  122 ttgtccccatgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaa 217  Q
    |||||| ||||| ||||  |||||||||||||||||||||||||||||  |||||| | |||||||||||   |||||||| |||||| |||||||    
T  34974693 ttgtcctcatgaacttaattcatttggtaagggataatgcatttgtatgtaggggctggggttcgaaccccggacaccccacttattctcctttaa 34974788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 127 - 229
Target Start/End: Complemental strand, 43362267 - 43362164
Alignment:
Q  127 cccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatt 225  Q
    ||||||||||||||||||||| ||||||||||||||   | ||| |||||| || |||||||||||   |||||||| ||||||| |||||| |||||||    
T  43362267 cccatgagcttagctcatttgctaagggataatgcacaatatattcaggggtcggggttcgaaccccggacaccccacttattcatctttaaggtgaatt 43362168  T
Q  226 tctt 229  Q
    ||||    
T  43362167 tctt 43362164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 124 - 246
Target Start/End: Original strand, 46283115 - 46283238
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 222  Q
    ||||||||||||||| |||||||||||||||||||||||   | | | ||| ||||| |||||||||||   |||||||| ||||||| |||||| ||||    
T  46283115 gtccccatgagcttacctcatttggtaagggataatgcacaatatgtgcagcggccggggttcgaaccccggacaccccacttattcatctttaaggtga 46283214  T
Q  223 atttctttaaccgctagactactt 246  Q
    |||||| ||  | |||||||||||    
T  46283215 atttctctagtcactagactactt 46283238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 145 - 239
Target Start/End: Complemental strand, 44251407 - 44251313
Alignment:
Q  145 ttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgctag 239  Q
    ||||||||||||||||||||| ||| |||||| || |||||||| ||   |||||||||||||||| |||||| |||||||| | || |||||||    
T  44251407 ttggtaagggataatgcatttttatgcaggggtcggggttcgaatcccggacaccccatttattcatctttaaggtgaatttttctagccgctag 44251313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 125 - 228
Target Start/End: Complemental strand, 40407062 - 40406957
Alignment:
Q  125 tccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggcc-gtggttcgaaccctatacaccccatttattcacctttaatgtga 222  Q
    ||||||||||||||||||||||||||||||||||||||   | | | |||||||| | |||||||||||   |||||||| ||||||| |||||| ||||    
T  40407062 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccgggggttcgaaccccggacaccccacttattcatctttaaggtga 40406963  T
Q  223 atttct 228  Q
    ||||||    
T  40406962 atttct 40406957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 249
Target Start/End: Complemental strand, 29889882 - 29889754
Alignment:
Q  122 ttgtccccatgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgt 220  Q
    |||||||  ||||||||||||| |  |||||||||||||||| || ||| ||||||||| |||||||||     |  |||||||||||||| ||||| ||    
T  29889882 ttgtccctgtgagcttagctcactatgtaagggataatgcatattatatgcaggggccggggttcgaacttcggatgccccatttattcacatttaaggt 29889783  T
Q  221 gaatttctttaaccgctagactacttaac 249  Q
    |||||||| || ||||||| |||||||||    
T  29889782 gaatttctctagccgctaggctacttaac 29889754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 51974738 - 51974778
Alignment:
Q  122 ttgtccccatgagcttagctcatttggtaagggataatgca 162  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  51974738 ttgtccccatgagcttagctcatttggtaagggataatgca 51974778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 56555538 - 56555646
Alignment:
Q  122 ttgtccccatgagcttag-ctcatttggtaa-gggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatg 219  Q
    |||||||| ||||||||| ||||  |||||| |||||||||||||| ||| |||||| || ||||||||||    |||||||| |||||||||||||| |    
T  56555538 ttgtccccgtgagcttaggctcacatggtaaagggataatgcatttatatgcaggggtcggggttcgaacctcgaacaccccacttattcacctttaagg 56555637  T
Q  220 tgaatttct 228  Q
    |||||||||    
T  56555638 tgaatttct 56555646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 181 - 246
Target Start/End: Complemental strand, 25234902 - 25234837
Alignment:
Q  181 ggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgctagactactt 246  Q
    ||||||||||| | |||||||| ||||||| |||||| |||||||||| ||||| |||||||||||    
T  25234902 ggttcgaaccccagacaccccagttattcatctttaaggtgaatttctctaaccactagactactt 25234837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 225
Target Start/End: Complemental strand, 2832175 - 2832071
Alignment:
Q  122 ttgtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgt 220  Q
    ||||||||||||||||||||||| ||||||||| | |||||   | | | |||||| || ||||||||||| | |||||||| ||||||| |||||| ||    
T  2832175 ttgtccccatgagcttagctcatctggtaaggggtgatgcacaatatgtgcaggggtcggggttcgaaccccaaacaccccacttattcatctttaaggt 2832076  T
Q  221 gaatt 225  Q
    |||||    
T  2832075 gaatt 2832071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 246
Target Start/End: Original strand, 50815700 - 50815823
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgc---atttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgt 220  Q
    |||||||||||||||||||||||| ||| |||||||||   |||||  | ||||||||| |||||||||||   ||||||||  |||||| ||| || ||    
T  50815700 gtccccatgagcttagctcatttgataaaggataatgcacaatttg--tgcaggggccggggttcgaaccccggacaccccacatattcatcttaaaggt 50815797  T
Q  221 gaatttctttaaccgctagactactt 246  Q
    |||||||| || || |||| ||||||    
T  50815798 gaatttctctagccactaggctactt 50815823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 162
Target Start/End: Complemental strand, 27862934 - 27862895
Alignment:
Q  123 tgtccccatgagcttagctcatttggtaagggataatgca 162  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  27862934 tgtccccatgagcttagctcatttgataagggataatgca 27862895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 195 - 246
Target Start/End: Original strand, 35733439 - 35733490
Alignment:
Q  195 acaccccatttattcacctttaatgtgaatttctttaaccgctagactactt 246  Q
    |||||||| |||||||||||||| |||| |||||||| ||||||||||||||    
T  35733439 acaccccacttattcacctttaaggtgagtttctttagccgctagactactt 35733490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 123 - 162
Target Start/End: Original strand, 49635424 - 49635463
Alignment:
Q  123 tgtccccatgagcttagctcatttggtaagggataatgca 162  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  49635424 tgtccccatgagtttagctcatttggtaagggataatgca 49635463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 145 - 246
Target Start/End: Complemental strand, 2766839 - 2766737
Alignment:
Q  145 ttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgctagacta 243  Q
    |||||||||||||||||||| ||||| ||||||||| | ||||||||| |  |||| || |  ||||||||||| ||||||||||  | ||||||| |||    
T  2766839 ttggtaagggataatgcattatgtatgcaggggccgggattcgaaccccaggcacctcactatttcacctttaaggtgaatttctccagccgctaggcta 2766740  T
Q  244 ctt 246  Q
    |||    
T  2766739 ctt 2766737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 41971401 - 41971363
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgca 162  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  41971401 gtccccatgagcttagctcatttggtaagtgataatgca 41971363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 9692953 - 9693060
Alignment:
Q  122 ttgtccccatgagcttagctcatttggtaagggataatgcatt--tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatg 219  Q
    |||||||| ||||| ||||||| |||| | |||||||||||||  | ||| ||||||||| |||||||||||   |||||||| |||||||| || || |    
T  9692953 ttgtccccgtgagcatagctcagttggca-gggataatgcattattatatgcaggggccggggttcgaaccccggacaccccacttattcactttaaaag 9693051  T
Q  220 tgaatttct 228  Q
    |||||||||    
T  9693052 tgaatttct 9693060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 246
Target Start/End: Complemental strand, 26885499 - 26885379
Alignment:
Q  127 cccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatt 225  Q
    |||||||||||||||||||||| | |||||||||||  || ||| | ||||||| |||||||||||   |||| ||| ||||| | |||||| ||| |||    
T  26885499 cccatgagcttagctcatttggcaggggataatgcacattatatgctggggccggggttcgaaccccggacactccacttatttatctttaaggtggatt 26885400  T
Q  226 tctttaaccgctagactactt 246  Q
    ||| || || |||| ||||||    
T  26885399 tctctagccactaggctactt 26885379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 39387474 - 39387510
Alignment:
Q  127 cccatgagcttagctcatttggtaagggataatgcat 163  Q
    ||||||| |||||||||||||||||||||||||||||    
T  39387474 cccatgaacttagctcatttggtaagggataatgcat 39387510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 246
Target Start/End: Complemental strand, 49811502 - 49811387
Alignment:
Q  131 tgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctt 229  Q
    |||||||| |||| ||||||||| ||||||||| || |||  |||||| | |||||||||||   | |||||| ||||||||||||||  |||||||||     
T  49811502 tgagcttatctcacttggtaaggaataatgcatattatatgtaggggcag-ggttcgaacccataataccccacttattcacctttaagatgaatttctc 49811404  T
Q  230 taaccgctagactactt 246  Q
    || ||||||| ||||||    
T  49811403 tagccgctaggctactt 49811387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 162
Target Start/End: Complemental strand, 8716493 - 8716454
Alignment:
Q  123 tgtccccatgagcttagctcatttggtaagggataatgca 162  Q
    ||||||||||| ||||||||||||| ||||||||||||||    
T  8716493 tgtccccatgaacttagctcatttgataagggataatgca 8716454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 137 - 243
Target Start/End: Original strand, 32037573 - 32037680
Alignment:
Q  137 tagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccg 235  Q
    ||||||| ||||| ||||||||||||| || ||| |||||| || ||||| || |||  | | ||||||||||||| ||||| |||||||||| || |||    
T  32037573 tagctcacttggttagggataatgcatattatatgcaggggtcggggttcaaatcctggatatcccatttattcacatttaaagtgaatttctctagccg 32037672  T
Q  236 ctagacta 243  Q
    ||| ||||    
T  32037673 ctaaacta 32037680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 127 - 162
Target Start/End: Original strand, 36993037 - 36993072
Alignment:
Q  127 cccatgagcttagctcatttggtaagggataatgca 162  Q
    ||||||||||||||||||||| ||||||||||||||    
T  36993037 cccatgagcttagctcatttgataagggataatgca 36993072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 246
Target Start/End: Original strand, 49607615 - 49607666
Alignment:
Q  195 acaccccatttattcacctttaatgtgaatttctttaaccgctagactactt 246  Q
    |||||||| |||||||||||||| |||||||||| || ||| ||||||||||    
T  49607615 acaccccacttattcacctttaaggtgaatttctctagccgatagactactt 49607666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 13210266 - 13210228
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgca 162  Q
    ||||| |||||||||||||||||||| ||||||||||||    
T  13210266 gtccctatgagcttagctcatttggtcagggataatgca 13210228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 162
Target Start/End: Original strand, 23448966 - 23449004
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgca 162  Q
    |||||||||| ||||||| ||||||||||||||||||||    
T  23448966 gtccccatgaacttagcttatttggtaagggataatgca 23449004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 128 - 162
Target Start/End: Complemental strand, 35909127 - 35909093
Alignment:
Q  128 ccatgagcttagctcatttggtaagggataatgca 162  Q
    ||||||||||||||||||| |||||||||||||||    
T  35909127 ccatgagcttagctcattttgtaagggataatgca 35909093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 135 - 164
Target Start/End: Original strand, 9884829 - 9884858
Alignment:
Q  135 cttagctcatttggtaagggataatgcatt 164  Q
    ||||||||||||||||||||||||||||||    
T  9884829 cttagctcatttggtaagggataatgcatt 9884858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 8716545 - 8716585
Alignment:
Q  122 ttgtccccatgagcttagctcatttggtaagggataatgca 162  Q
    ||||||| || |||||| |||||||||||||||||||||||    
T  8716545 ttgtccctataagcttatctcatttggtaagggataatgca 8716585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 195 - 243
Target Start/End: Original strand, 22525453 - 22525501
Alignment:
Q  195 acaccccatttattcacctttaatgtgaatttctttaaccgctagacta 243  Q
    |||||||| ||||||||||||||  ||||||||| |||||||| |||||    
T  22525453 acaccccacttattcacctttaagatgaatttctctaaccgctggacta 22525501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 43084438 - 43084478
Alignment:
Q  122 ttgtccccatgagcttagctcatttggtaagggataatgca 162  Q
    ||||| ||||||||||| |||||||||||||| ||||||||    
T  43084438 ttgtctccatgagcttaactcatttggtaaggaataatgca 43084478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 124 - 191
Target Start/End: Original strand, 55055913 - 55055980
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccc 191  Q
    |||||| ||||||||||||| ||||| ||||| ||||||| || ||| ||||||||| |||||||||||    
T  55055913 gtccccgtgagcttagctcagttggt-agggacaatgcatattttatgcaggggccgaggttcgaaccc 55055980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 69; Significance: 1e-30; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 122 - 246
Target Start/End: Original strand, 5228062 - 5228186
Alignment:
Q  122 ttgtccccatgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtg 221  Q
    |||||||||||||||||||||| ||| ||| ||||||||||||| ||| ||||||||| |||||||| |||  |||||||| |||||||||||||| |||    
T  5228062 ttgtccccatgagcttagctcacttgataaaggataatgcatttttatgcaggggccggggttcgaatcctggacaccccacttattcacctttaaggtg 5228161  T
Q  222 aatttctttaaccgctagactactt 246  Q
    ||||||| || ||||||| ||||||    
T  5228162 aatttctctagccgctaggctactt 5228186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 119 - 246
Target Start/End: Original strand, 14707281 - 14707408
Alignment:
Q  119 taattgtccccatgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaat 218  Q
    |||| |||||||||||||||||||||||||||||||||||||||||| ||| ||||||  | |||||||||||   |||||||| |||||||||||||      
T  14707281 taatcgtccccatgagcttagctcatttggtaagggataatgcatttatatgcaggggttggggttcgaaccccggacaccccacttattcacctttata 14707380  T
Q  219 gtgaatttctttaaccgctagactactt 246  Q
    |||||||||| || ||| ||||||||||    
T  14707381 gtgaatttctctagccgttagactactt 14707408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 64; E-Value: 1e-27
Query Start/End: Original strand, 124 - 246
Target Start/End: Original strand, 15025149 - 15025272
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 222  Q
    ||||||||||||||| |||||||||||||||||||||||| || ||| ||||||||| ||||| |||||   |||||||| |||||||||||||| ||||    
T  15025149 gtccccatgagcttaactcatttggtaagggataatgcatattttatacaggggccggggttcaaaccccgaacaccccacttattcacctttaaggtga 15025248  T
Q  223 atttctttaaccgctagactactt 246  Q
    |||||| || ||||||| ||||||    
T  15025249 atttctctacccgctaggctactt 15025272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 148 - 228
Target Start/End: Complemental strand, 10091534 - 10091454
Alignment:
Q  148 gtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttct 228  Q
    |||||||||||||||||||||| ||||||||| ||||||||||||| |||||| | |||||||||||||| ||||||||||    
T  10091534 gtaagggataatgcatttgtatgcaggggccggggttcgaaccctagacacccaacttattcacctttaaggtgaatttct 10091454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 123 - 228
Target Start/End: Original strand, 40273813 - 40273919
Alignment:
Q  123 tgtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtg 221  Q
    ||||||||||||||||||||||||||||||||||||||||   | | | ||||||||| |||||||||||   |||||||| ||||||| |||||| |||    
T  40273813 tgtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtg 40273912  T
Q  222 aatttct 228  Q
    |||||||    
T  40273913 aatttct 40273919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 131 - 248
Target Start/End: Original strand, 46243291 - 46243409
Alignment:
Q  131 tgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctt 229  Q
    ||||||||||||||||||||||||||||||||| || |||  ||||  ||  |||||||| |   |||||||| |||||||||||||| ||||||||||     
T  46243291 tgagcttagctcatttggtaagggataatgcatattatatatagggatcggagttcgaactccgaacaccccacttattcacctttaaggtgaatttctc 46243390  T
Q  230 taaccgctagactacttaa 248  Q
    ||||||||||| |||||||    
T  46243391 taaccgctagaatacttaa 46243409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 124 - 248
Target Start/End: Original strand, 37665737 - 37665862
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 222  Q
    |||||| |||||||| |||||||||||| ||||||  ||| || ||| ||||||||| ||||| |||||   |||||||| |||||| ||||||| ||||    
T  37665737 gtccccgtgagcttaactcatttggtaaaggataaaacatattatatgcaggggccggggttcaaaccccggacaccccacttattcgcctttaaggtga 37665836  T
Q  223 atttctttaaccgctagactacttaa 248  Q
    ||||||||| || |||||||||||||    
T  37665837 atttctttagccactagactacttaa 37665862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 124 - 246
Target Start/End: Original strand, 24029978 - 24030100
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgca---tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgt 220  Q
    ||||||||||| |||||||||||| ||||||||||||||   | ||| |  |||||||| ||||||||||| | |||||||||||||||| |||||| ||    
T  24029978 gtccccatgagtttagctcatttgataagggataatgcacaatatgtgt--aggggccggggttcgaaccccagacaccccatttattcatctttaaggt 24030075  T
Q  221 gaatttctttaaccgctagactactt 246  Q
    |||||||| || || |||||||||||    
T  24030076 gaatttctctagcc-ctagactactt 24030100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 124 - 246
Target Start/End: Complemental strand, 48433812 - 48433689
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 222  Q
    |||||||||||||||||||||||||||||||||||||||   | | | ||||||||| ||||| |||||   |||||||| ||||||| |||||| ||||    
T  48433812 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcaaaccccggacaccccacttattcatctttaaggtga 48433713  T
Q  223 atttctttaaccgctagactactt 246  Q
    |||||| || || |||| ||||||    
T  48433712 atttctctagccactaggctactt 48433689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 131 - 228
Target Start/End: Complemental strand, 44662558 - 44662460
Alignment:
Q  131 tgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttct 228  Q
    ||||||||||||| | |||||||||||||||||| ||||| ||||||||| |||||||||||   |||||||| |  ||||||||||| ||||||||||    
T  44662558 tgagcttagctcactaggtaagggataatgcattatgtatgcaggggccggggttcgaaccccggacaccccactatttcacctttaaggtgaatttct 44662460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 127 - 239
Target Start/End: Original strand, 20013578 - 20013690
Alignment:
Q  127 cccatgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaattt 226  Q
    ||||||| |||| |||||||||||| ||||||||||||||||| |||||||||  ||||||| ||   ||| |||| |||| |||||||||  |||||||    
T  20013578 cccatgaacttaactcatttggtaaaggataatgcatttgtatgcaggggccgaagttcgaatcccggacatcccacttatccacctttaagatgaattt 20013677  T
Q  227 ctttaaccgctag 239  Q
    || || |||||||    
T  20013678 ctctagccgctag 20013690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 140 - 228
Target Start/End: Original strand, 20529906 - 20529994
Alignment:
Q  140 ctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttct 228  Q
    |||||||||||||||||||||||||||||| |||||  || ||||| | |||   |||||||| |||||||||||||| ||||||||||    
T  20529906 ctcatttggtaagggataatgcatttgtatgcagggatcggggttcaagccccggacaccccacttattcacctttaaggtgaatttct 20529994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 131 - 246
Target Start/End: Original strand, 23602274 - 23602390
Alignment:
Q  131 tgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctt 229  Q
    ||||||||||||||||| ||||| ||||||||| || ||| ||| | |||  ||||||||||   ||||| || |||||||||||||| |||||||||||    
T  23602274 tgagcttagctcatttgataaggaataatgcatattatatgcagtgaccggagttcgaaccccggacacctcacttattcacctttaaggtgaatttctt 23602373  T
Q  230 taaccgctagactactt 246  Q
    || || |||||||||||    
T  23602374 tagccactagactactt 23602390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 128 - 244
Target Start/End: Complemental strand, 48258281 - 48258165
Alignment:
Q  128 ccatgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttc 227  Q
    |||||| |||| || |||||||||| ||||||||||||||||  ||| | ||  ||||||||||   ||||||||||||||||||||||| ||||||||     
T  48258281 ccatgaacttaacttatttggtaagtgataatgcatttgtatgtaggagtcggagttcgaaccccggacaccccatttattcacctttaaagtgaatttg 48258182  T
Q  228 tttaaccgctagactac 244  Q
    | || ||||||| ||||    
T  48258181 tctagccgctaggctac 48258165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 131 - 246
Target Start/End: Complemental strand, 9668909 - 9668795
Alignment:
Q  131 tgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttcttt 230  Q
    ||||||||||||| ||||||||||||||||||| | ||| ||||| |   ||||||||||| | ||||| |||||||||||| |||| |||||||||| |    
T  9668909 tgagcttagctcacttggtaagggataatgcatatttatgcagggactagggttcgaaccccaaacacctcatttattcacc-ttaaggtgaatttctct 9668811  T
Q  231 aaccgctagactactt 246  Q
      ||||||| ||||||    
T  9668810 ggccgctaggctactt 9668795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 140 - 246
Target Start/End: Complemental strand, 10624882 - 10624777
Alignment:
Q  140 ctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgctag 239  Q
    |||||||| |||||||||||||||||| || |||||| |  ||||||||||| | ||||| || ||||||| |||||| |||||||||| || ||||| |    
T  10624882 ctcatttgataagggataatgcatttgcatgcaggggtcagggttcgaaccccaaacaccgcacttattca-ctttaaggtgaatttctctagccgcttg 10624784  T
Q  240 actactt 246  Q
    |||||||    
T  10624783 actactt 10624777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 128 - 228
Target Start/End: Original strand, 12166079 - 12166180
Alignment:
Q  128 ccatgagcttagctcatttggtaagggataatgc---atttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaat 224  Q
    |||||| |||||||||||||||||||||||||||   |||||  | ||||||| | ||||||||||| | |||||||| ||||||| |||||| ||||||    
T  12166079 ccatgaacttagctcatttggtaagggataatgcacaatttg--tgcaggggctggggttcgaaccccagacaccccacttattcatctttaaggtgaat 12166176  T
Q  225 ttct 228  Q
    ||||    
T  12166177 ttct 12166180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 122 - 162
Target Start/End: Complemental strand, 23824695 - 23824655
Alignment:
Q  122 ttgtccccatgagcttagctcatttggtaagggataatgca 162  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  23824695 ttgtccccatgagcttagctcatttggtaagggataatgca 23824655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 124 - 230
Target Start/End: Complemental strand, 33248904 - 33248797
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 222  Q
    ||||||||||||||||||||||||||||||||| |||||   | ||| ||| || || |||||||||||   |||||| | ||||||| |||||| ||||    
T  33248904 gtccccatgagcttagctcatttggtaagggatgatgcacaatatatgcagaggtcggggttcgaaccccggacaccctacttattcatctttaaggtga 33248805  T
Q  223 atttcttt 230  Q
    ||||||||    
T  33248804 atttcttt 33248797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 44986584 - 44986625
Alignment:
Q  121 attgtccccatgagcttagctcatttggtaagggataatgca 162  Q
    ||||||| ||||||||||||||||||||||||||||||||||    
T  44986584 attgtcctcatgagcttagctcatttggtaagggataatgca 44986625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 123 - 246
Target Start/End: Original strand, 46266660 - 46266784
Alignment:
Q  123 tgtccccatgagcttagctcatttggtaagggataatgc---atttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatg 219  Q
    |||||||||||||||| ||||||||||||||||||||||   |||||  | | |||| || |||||||||| |  ||| |||| ||||||| ||| || |    
T  46266660 tgtccccatgagcttaactcatttggtaagggataatgcacaatttg--tgcgggggacggggttcgaaccttgaacatcccacttattcatcttaaagg 46266757  T
Q  220 tgaatttctttaaccgctagactactt 246  Q
    ||||||| | ||||| |||||||||||    
T  46266758 tgaatttatctaaccactagactactt 46266784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 124 - 246
Target Start/End: Complemental strand, 26456107 - 26455984
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 222  Q
    |||||||||||||||||||||||||||||||| ||||||   | | | ||||| | |  ||| |||||| | |||| ||| ||||||||||| || ||||    
T  26456107 gtccccatgagcttagctcatttggtaagggacaatgcacaatatgtgcagggactgacgtttgaaccccagacactccagttattcaccttaaaggtga 26456008  T
Q  223 atttctttaaccgctagactactt 246  Q
    |||||| || || |||||||||||    
T  26456007 atttctctagccactagactactt 26455984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 162
Target Start/End: Original strand, 27454007 - 27454042
Alignment:
Q  127 cccatgagcttagctcatttggtaagggataatgca 162  Q
    ||||||||||||||||||||||||||||||||||||    
T  27454007 cccatgagcttagctcatttggtaagggataatgca 27454042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 195 - 246
Target Start/End: Original strand, 32376504 - 32376555
Alignment:
Q  195 acaccccatttattcacctttaatgtgaatttctttaaccgctagactactt 246  Q
    |||||||||||||||| |||||| ||||||||||||| |||||| |||||||    
T  32376504 acaccccatttattcaactttaaggtgaatttctttagccgctaaactactt 32376555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 3902375 - 3902337
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgca 162  Q
    ||||||| |||||||||||||||||||||||||||||||    
T  3902375 gtccccacgagcttagctcatttggtaagggataatgca 3902337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 36528321 - 36528283
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgca 162  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  36528321 gtccccatgagcttaactcatttggtaagggataatgca 36528283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 162
Target Start/End: Original strand, 42554631 - 42554665
Alignment:
Q  128 ccatgagcttagctcatttggtaagggataatgca 162  Q
    |||||||||||||||||||||||||||||||||||    
T  42554631 ccatgagcttagctcatttggtaagggataatgca 42554665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 114 - 246
Target Start/End: Complemental strand, 26606221 - 26606088
Alignment:
Q  114 ctacgtaattgtccccatgagcttagctcatttggtaagggataatgcatttg-tatccaggggccgtggttcgaaccctatacaccccatttattcacc 212  Q
    |||| ||| |||||| |||||||||| ||| ||| ||||| ||||||||  |  |||  |||||||| |||| |||||||  |||| ||| |||||||||    
T  26606221 ctacttaactgtccctatgagcttagttcacttgataaggaataatgcaaatcatatgtaggggccggggtttgaaccctggacactccacttattcacc 26606122  T
Q  213 tttaatgtgaatttctttaaccgctagactactt 246  Q
    ||||| |||||||||| || ||||| | ||||||    
T  26606121 tttaaggtgaatttctctagccgcttggctactt 26606088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 31793461 - 31793566
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 222  Q
    |||| ||||||||||||||||||| ||||||||||||||   | | | |||||| || |||||||||||   |||||||| ||||||| |||||| |||     
T  31793461 gtccacatgagcttagctcatttgttaagggataatgcacaatatgtgcaggggtcggggttcgaaccccggacaccccacttattcatctttaaggtgg 31793560  T
Q  223 atttct 228  Q
    ||||||    
T  31793561 atttct 31793566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 42338348 - 42338311
Alignment:
Q  125 tccccatgagcttagctcatttggtaagggataatgca 162  Q
    ||||||||||||||||||||||||||||| ||||||||    
T  42338348 tccccatgagcttagctcatttggtaaggaataatgca 42338311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 119 - 191
Target Start/End: Complemental strand, 46570078 - 46570005
Alignment:
Q  119 taattgtccccatgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccc 191  Q
    |||| |||||| ||||||||||||| ||| |||||||||||||||  | ||| ||||||||| |||||||||||    
T  46570078 taatagtccccgtgagcttagctcacttgataagggataatgcatagtttatgcaggggccggggttcgaaccc 46570005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 159
Target Start/End: Original strand, 1575686 - 1575722
Alignment:
Q  123 tgtccccatgagcttagctcatttggtaagggataat 159  Q
    |||||||||||||||| ||||||||||||||||||||    
T  1575686 tgtccccatgagcttaactcatttggtaagggataat 1575722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 226
Target Start/End: Complemental strand, 8133898 - 8133794
Alignment:
Q  123 tgtccccatgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtg 221  Q
    |||||| |||||||||||||| ||| ||| |||||||||||  | ||| |||||||||  |||||||| | | |||||||||| |||  ||||||| |||    
T  8133898 tgtccctatgagcttagctcacttgataatggataatgcataatttatgcaggggccgaagttcgaactccagacaccccattaatttgcctttaaggtg 8133799  T
Q  222 aattt 226  Q
    |||||    
T  8133798 aattt 8133794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 123 - 163
Target Start/End: Original strand, 8249697 - 8249737
Alignment:
Q  123 tgtccccatgagcttagctcatttggtaagggataatgcat 163  Q
    ||||||||||||||||||||| ||||||| |||||||||||    
T  8249697 tgtccccatgagcttagctcacttggtaaaggataatgcat 8249737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 10900070 - 10900106
Alignment:
Q  127 cccatgagcttagctcatttggtaagggataatgcat 163  Q
    ||||||||||||||||||||||||||| |||||||||    
T  10900070 cccatgagcttagctcatttggtaaggaataatgcat 10900106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 136 - 246
Target Start/End: Complemental strand, 28914968 - 28914856
Alignment:
Q  136 ttagctcatttggtaagggataatgcat-ttgtatccagggg-ccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaac 233  Q
    ||||||||  |||||||||||||||||| || ||| |||||| ||| |||||||||||   |||||||| |||||||| || || |||||||||| || |    
T  28914968 ttagctcacatggtaagggataatgcatattatatgcagggggccggggttcgaaccccggacaccccacttattcactttaaaggtgaatttctctagc 28914869  T
Q  234 cgctagactactt 246  Q
    | |||| ||||||    
T  28914868 cactaggctactt 28914856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 176
Target Start/End: Original strand, 32986339 - 32986391
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgcatttgtatccagggg 176  Q
    |||||||| | |||| ||||||||| |||||||||||||||||||| ||||||    
T  32986339 gtccccatcaacttaactcatttggcaagggataatgcatttgtatgcagggg 32986391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 171 - 246
Target Start/End: Complemental strand, 4956146 - 4956071
Alignment:
Q  171 caggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgctagactactt 246  Q
    |||||| || ||||||||||||  |||||||| ||||||| |||||| |||||||||| || || |||| ||||||    
T  4956146 caggggtcggggttcgaaccctggacaccccacttattcatctttaaggtgaatttctctagccactaggctactt 4956071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 229
Target Start/End: Original strand, 29357801 - 29357899
Alignment:
Q  131 tgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctt 229  Q
    ||||||||||||| ||| |||||||||||||||| | ||| || ||||||  |||||||||||  |||| ||| |  ||||||||||| |||||||||||    
T  29357801 tgagcttagctcacttgataagggataatgcattatatatgca-gggccggagttcgaaccctggacactccactatttcacctttaaggtgaatttctt 29357899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 131 - 162
Target Start/End: Complemental strand, 38110277 - 38110246
Alignment:
Q  131 tgagcttagctcatttggtaagggataatgca 162  Q
    ||||||||||||||||||||||||||||||||    
T  38110277 tgagcttagctcatttggtaagggataatgca 38110246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 46195909 - 46196016
Alignment:
Q  122 ttgtccccatgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgt 220  Q
    |||||||| ||| ||||||| | ||| |||||||||||| ||| ||||| |||||| || |||| ||||||   |||||||| |  ||||||||||| ||    
T  46195909 ttgtccccgtgaacttagcttacttgataagggataatgtattatgtatgcaggggtcggggtttgaaccccggacaccccactatttcacctttaaggt 46196008  T
Q  221 gaatttct 228  Q
    ||||||||    
T  46196009 gaatttct 46196016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 132 - 228
Target Start/End: Complemental strand, 6548805 - 6548709
Alignment:
Q  132 gagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttct 228  Q
    |||||||||||| || |||||| |||||||||| ||||| || |||||| ||||||||| |   |||||||| |  ||||||||||| ||||||||||    
T  6548805 gagcttagctcacttagtaaggaataatgcattatgtatgca-gggccggggttcgaactccggacaccccactatttcacctttaaggtgaatttct 6548709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 164
Target Start/End: Original strand, 9992610 - 9992643
Alignment:
Q  131 tgagcttagctcatttggtaagggataatgcatt 164  Q
    ||||||||||||||||| ||||||||||||||||    
T  9992610 tgagcttagctcatttgataagggataatgcatt 9992643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 123 - 160
Target Start/End: Original strand, 28712360 - 28712397
Alignment:
Q  123 tgtccccatgagcttagctcatttggtaagggataatg 160  Q
    ||||| |||||||||| |||||||||||||||||||||    
T  28712360 tgtcctcatgagcttaactcatttggtaagggataatg 28712397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 125 - 192
Target Start/End: Complemental strand, 19753040 - 19752973
Alignment:
Q  125 tccccatgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccct 192  Q
    ||||| ||||||||||||| |||||| |||||| ||||| || ||| ||||||||| ||||||||||||    
T  19753040 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggccggggttcgaaccct 19752973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 163
Target Start/End: Original strand, 25965742 - 25965778
Alignment:
Q  127 cccatgagcttagctcatttggtaagggataatgcat 163  Q
    |||||||||||||||||  ||||||||||||||||||    
T  25965742 cccatgagcttagctcacctggtaagggataatgcat 25965778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 56; Significance: 6e-23; HSPs: 26)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 124 - 239
Target Start/End: Original strand, 17855643 - 17855758
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaa 223  Q
    |||||||| |||||| ||||||||||| | |||||||||||||||| ||||||||| |||||||||||   |||||||| |||||||| ||||| |||||    
T  17855643 gtccccataagcttaactcatttggtaggcgataatgcatttgtatgcaggggccggggttcgaaccccggacaccccacttattcacatttaaagtgaa 17855742  T
Q  224 tttctttaaccgctag 239  Q
    ||| | || |||||||    
T  17855743 tttttctagccgctag 17855758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 131 - 246
Target Start/End: Complemental strand, 39172307 - 39172192
Alignment:
Q  131 tgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttcttt 230  Q
    |||||||| |||||||||||| |||||||||||||||||  || |||||  ||||||| ||   ||||||||||||||||||||||| ||||||||||||    
T  39172307 tgagcttaactcatttggtaaaggataatgcatttgtatgtagaggccgaagttcgaatcccggacaccccatttattcacctttaaagtgaatttcttt 39172208  T
Q  231 aaccgctagactactt 246  Q
    | || |||| ||||||    
T  39172207 agcccctaggctactt 39172192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 41454931 - 41454824
Alignment:
Q  122 ttgtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgt 220  Q
    |||||||||||||||||||||||||||||||||||||||||   | | | ||||||||| |||||||||||   |||||||| ||||||| |||||||||    
T  41454931 ttgtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaatgt 41454832  T
Q  221 gaatttct 228  Q
    ||||||||    
T  41454831 gaatttct 41454824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 32822107 - 32822213
Alignment:
Q  122 ttgtccccatgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtg 221  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||  |||||| |  |||||||||| | ||| |||| | |||||| ||||| |||    
T  32822107 ttgtccccatgagcttaactcatttggtaagggataatgcatttgtatataggggcgggagttcgaaccccagacatcccactcattcacttttaaggtg 32822206  T
Q  222 aatttct 228  Q
    |||||||    
T  32822207 aatttct 32822213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 129 - 246
Target Start/End: Complemental strand, 10621472 - 10621354
Alignment:
Q  129 catgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttc 227  Q
    ||||||||||||||| ||| |||||||||||||||| ||||| |||||| |  |||| ||||||   ||||||||||| |||||||||||||||||||||    
T  10621472 catgagcttagctcacttgataagggataatgcattatgtatgcaggggtcagggtttgaaccccggacaccccattttttcacctttaatgtgaatttc 10621373  T
Q  228 tttaaccgctagactactt 246  Q
    ||   ||||||| ||||||    
T  10621372 ttccgccgctaggctactt 10621354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 1032564 - 1032668
Alignment:
Q  125 tccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaa 223  Q
    ||||||||||||||||||||||||||||||||||||||   | | | ||||||| | ||||||||||| | |||||||| ||||||| |||||| |||||    
T  1032564 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccagacaccccacttattcatctttaaggtgaa 1032663  T
Q  224 tttct 228  Q
    |||||    
T  1032664 tttct 1032668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 135 - 246
Target Start/End: Complemental strand, 19957412 - 19957300
Alignment:
Q  135 cttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaac 233  Q
    ||||||||| ||||||||||||||||||| || ||| |||||| || |||||||||||   |||||||| |||||||||||||| |||||||||| || |    
T  19957412 cttagctcacttggtaagggataatgcatattatatgcaggggacgaggttcgaaccccggacaccccacttattcacctttaaggtgaatttctctagc 19957313  T
Q  234 cgctagactactt 246  Q
     ||||| ||||||    
T  19957312 agctaggctactt 19957300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 122 - 231
Target Start/End: Complemental strand, 41845533 - 41845423
Alignment:
Q  122 ttgtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgt 220  Q
    ||||| |||||||||||||||||||||||||||||||||||   | | | |||||  || |||||||||||   |||||| ||||||||| |||||| ||    
T  41845533 ttgtctccatgagcttagctcatttggtaagggataatgcacaatatgtgcagggatcggggttcgaaccccgaacaccctatttattcatctttaaggt 41845434  T
Q  221 gaatttcttta 231  Q
    |||||||||||    
T  41845433 gaatttcttta 41845423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 123 - 246
Target Start/End: Complemental strand, 44828536 - 44828411
Alignment:
Q  123 tgtccccatgagcttagctcatttggtaagggataatgc---atttgtatccaggggccgtggttcgaaccctatacaccccatttattca-cctttaat 218  Q
    |||||||||||||||||||||||||||||||||||||||   |||||  | ||||| | | ||||||||||| | ||||| || ||||||| | |||||     
T  44828536 tgtccccatgagcttagctcatttggtaagggataatgcacaatttg--tgcagggtctggggttcgaaccccagacaccacacttattcatcttttaag 44828439  T
Q  219 gtgaatttctttaaccgctagactactt 246  Q
    ||||||||||||| ||  ||||||||||    
T  44828438 gtgaatttctttagccattagactactt 44828411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 124 - 234
Target Start/End: Complemental strand, 19733171 - 19733060
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 222  Q
    |||||||| |||||||||||||||||||||||||||||||  | ||| |||||| || |||||||| ||   |||||  | ||||||| |||||| ||||    
T  19733171 gtccccataagcttagctcatttggtaagggataatgcataatatatgcaggggtcggggttcgaatcccgaacacctaaattattcatctttaaggtga 19733072  T
Q  223 atttctttaacc 234  Q
    |||||| |||||    
T  19733071 atttctctaacc 19733060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 120 - 210
Target Start/End: Original strand, 23139063 - 23139154
Alignment:
Q  120 aattgtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattca 210  Q
    ||||||||||||||||||||||||||||  |||||||||||||   ||| | ||||||||| ||||||||| | | |||||||| |||||||    
T  23139063 aattgtccccatgagcttagctcatttgacaagggataatgcacaatgtgtgcaggggccgaggttcgaacaccagacaccccacttattca 23139154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 122 - 228
Target Start/End: Complemental strand, 38289339 - 38289232
Alignment:
Q  122 ttgtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgt 220  Q
    |||| ||||| ||||||||||||||||||||||||||||||   | | | |||||| || ||||||||||  | |||||||| ||||||| |||||| ||    
T  38289339 ttgttcccataagcttagctcatttggtaagggataatgcacaatatgtgcaggggtcggggttcgaacctcaaacaccccacttattcatctttaaggt 38289240  T
Q  221 gaatttct 228  Q
    ||||||||    
T  38289239 gaatttct 38289232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 13906728 - 13906690
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgca 162  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13906728 gtccccatgagcttagctcatttggtaagggataatgca 13906690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 120 - 162
Target Start/End: Original strand, 30466668 - 30466710
Alignment:
Q  120 aattgtccccatgagcttagctcatttggtaagggataatgca 162  Q
    ||||||||||||||||||||||||||||||||||| |||||||    
T  30466668 aattgtccccatgagcttagctcatttggtaagggctaatgca 30466710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 122 - 246
Target Start/End: Original strand, 38063968 - 38064093
Alignment:
Q  122 ttgtccccatgagcttagctcatttggtaagggataatgc---atttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaat 218  Q
    |||||||||||||||||  |||||||||||||||||||||   |||||  | ||||| | | || | |||||| | |||||||| ||||||| ||||||     
T  38063968 ttgtccccatgagcttaattcatttggtaagggataatgcacaatttg--tgcagggactgggggttgaaccccagacaccccacttattcatctttaag 38064065  T
Q  219 gtgaatttctttaaccgctagactactt 246  Q
    |||||||||| ||||| || ||||||||    
T  38064066 gtgaatttctctaaccactggactactt 38064093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 246
Target Start/End: Original strand, 4259851 - 4259975
Alignment:
Q  123 tgtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtg 221  Q
    ||||| |||||||||| |||||||||||||||||||||||   | | | ||||||||| ||||| |||||   || ||||| ||||||| |||||| |||    
T  4259851 tgtccgcatgagcttaactcatttggtaagggataatgcacaatatgtgcaggggccggggttccaaccccggactccccacttattcatctttaaggtg 4259950  T
Q  222 aatttctttaaccgctagactactt 246  Q
    ||||||| || || |||| ||||||    
T  4259951 aatttctctagccactaggctactt 4259975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 130 - 228
Target Start/End: Complemental strand, 11052680 - 11052581
Alignment:
Q  130 atgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttct 228  Q
    ||||||||| |||||||||||||||||||||||  |  | | ||||||||  |||  |||||||| |||||||| ||||||| |||||| ||||||||||    
T  11052680 atgagcttaactcatttggtaagggataatgcacatattgtgcaggggccaaggtgtgaaccctaaacaccccacttattcatctttaaggtgaatttct 11052581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 162
Target Start/End: Original strand, 10161957 - 10161995
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgca 162  Q
    ||||||||||||||||||||| |||||||||||||||||    
T  10161957 gtccccatgagcttagctcatctggtaagggataatgca 10161995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 128 - 228
Target Start/End: Original strand, 22652680 - 22652781
Alignment:
Q  128 ccatgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaattt 226  Q
    |||||||||||||||||||| |||||||||||||||  | | | |||||||||  ||||||||||   |||||||| |||||||  || || ||||||||    
T  22652680 ccatgagcttagctcatttgataagggataatgcataatttgtgcaggggccggtgttcgaaccccggacaccccaattattcatgttaaaggtgaattt 22652779  T
Q  227 ct 228  Q
    ||    
T  22652780 ct 22652781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 195 - 231
Target Start/End: Complemental strand, 11690984 - 11690948
Alignment:
Q  195 acaccccatttattcacctttaatgtgaatttcttta 231  Q
    ||||||||||||||||||||||| |||||||||||||    
T  11690984 acaccccatttattcacctttaaggtgaatttcttta 11690948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 164
Target Start/End: Original strand, 31220337 - 31220377
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgcatt 164  Q
    |||||| ||||||||||||| ||||||||||||||||||||    
T  31220337 gtccccgtgagcttagctcacttggtaagggataatgcatt 31220377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 238
Target Start/End: Original strand, 8145838 - 8145881
Alignment:
Q  195 acaccccatttattcacctttaatgtgaatttctttaaccgcta 238  Q
    |||||||| |||||||||||||| |||||||||| |||||||||    
T  8145838 acaccccacttattcacctttaaggtgaatttctctaaccgcta 8145881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 121 - 163
Target Start/End: Original strand, 40444695 - 40444737
Alignment:
Q  121 attgtccccatgagcttagctcatttggtaagggataatgcat 163  Q
    ||||||| | ||||||||||||| |||||||||||||||||||    
T  40444695 attgtccacgtgagcttagctcacttggtaagggataatgcat 40444737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 132 - 162
Target Start/End: Complemental strand, 43456746 - 43456716
Alignment:
Q  132 gagcttagctcatttggtaagggataatgca 162  Q
    |||||||||||||||||||||||||||||||    
T  43456746 gagcttagctcatttggtaagggataatgca 43456716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 228
Target Start/End: Original strand, 10201259 - 10201360
Alignment:
Q  128 ccatgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaattt 226  Q
    ||||||| |||| | | |||||||| ||||||||||  | |||  ||||| || |||||||||||   ||||| ||||||||||||||||| ||||||||    
T  10201259 ccatgagtttagtttagttggtaagagataatgcataatatatgtaggggtcggggttcgaaccccggacacctcatttattcacctttaaagtgaattt 10201358  T
Q  227 ct 228  Q
    ||    
T  10201359 ct 10201360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 122 - 162
Target Start/End: Original strand, 29114093 - 29114133
Alignment:
Q  122 ttgtccccatgagcttagctcatttggtaagggataatgca 162  Q
    |||| ||||||| ||||||||||||| ||||||||||||||    
T  29114093 ttgttcccatgaacttagctcatttgataagggataatgca 29114133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 56; Significance: 6e-23; HSPs: 21)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 135 - 246
Target Start/End: Original strand, 7164699 - 7164810
Alignment:
Q  135 cttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaacc 234  Q
    ||||||||||||| ||||||||||||||||| |||  ||||||||  ||||||||||    ||||||| |||||||||||||| |||||||||| || ||    
T  7164699 cttagctcatttgataagggataatgcatttatatgtaggggccggagttcgaaccccgaccaccccacttattcacctttaaggtgaatttctctagcc 7164798  T
Q  235 gctagactactt 246  Q
    ||||||||||||    
T  7164799 gctagactactt 7164810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 123 - 246
Target Start/End: Complemental strand, 6228363 - 6228239
Alignment:
Q  123 tgtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtg 221  Q
    ||||||||||||||||||||||||||||||||||||||||   | | | ||||||||| |||||||||||   |||||||| ||||||| |||||| |||    
T  6228363 tgtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtg 6228264  T
Q  222 aatttctttaaccgctagactactt 246  Q
    ||||||| || || |||| ||||||    
T  6228263 aatttctctagccactaggctactt 6228239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 120 - 246
Target Start/End: Complemental strand, 4854412 - 4854285
Alignment:
Q  120 aattgtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaat 218  Q
    ||||||||||||||||||||||||||||| ||||||||||| |   ||| | ||||||||| |||||||||||   |||||||| ||||||| ||||||     
T  4854412 aattgtccccatgagcttagctcatttggcaagggataatgtacaatgtgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaag 4854313  T
Q  219 gtgaatttctttaaccgctagactactt 246  Q
    || ||||||| ||||| |||| ||||||    
T  4854312 gtaaatttctctaaccactagcctactt 4854285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 143 - 226
Target Start/End: Original strand, 9455852 - 9455935
Alignment:
Q  143 atttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaattt 226  Q
    |||||||||||||||||||||||||||  ||||| ||  |||||||||| | |||||||| ||||||||||||||  |||||||    
T  9455852 atttggtaagggataatgcatttgtatgtaggggtcggagttcgaaccccaaacaccccacttattcacctttaagttgaattt 9455935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 124 - 246
Target Start/End: Complemental strand, 18903469 - 18903346
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 222  Q
    ||||||||||||||||||||||||| |||||||||| ||   | | | ||||||||| |||||||||||   |||||||| ||||||| |||||| ||||    
T  18903469 gtccccatgagcttagctcatttggcaagggataatacacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtga 18903370  T
Q  223 atttctttaaccgctagactactt 246  Q
    |||||| || || |||| ||||||    
T  18903369 atttctctagccactaggctactt 18903346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 153 - 249
Target Start/End: Original strand, 32344662 - 32344758
Alignment:
Q  153 ggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgctagactacttaac 249  Q
    |||||||| |||||||| ||||||  | ||||||||| |   |||||||| |||||||||||||| ||||||||| ||| ||| |||||||||||||    
T  32344662 ggataatgtatttgtatgcaggggttggggttcgaactccggacaccccacttattcacctttaaagtgaatttccttagccgttagactacttaac 32344758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 15717115 - 15717077
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgca 162  Q
    |||||||||||||||||||||||||||||||||||||||    
T  15717115 gtccccatgagcttagctcatttggtaagggataatgca 15717077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 126 - 163
Target Start/End: Original strand, 17216953 - 17216990
Alignment:
Q  126 ccccatgagcttagctcatttggtaagggataatgcat 163  Q
    ||||||||||||||||||||||||||||||||||||||    
T  17216953 ccccatgagcttagctcatttggtaagggataatgcat 17216990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 125 - 228
Target Start/End: Complemental strand, 20415663 - 20415559
Alignment:
Q  125 tccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaa 223  Q
    |||||||||| ||||||||||| |||||||||||||||   | | | ||||||||  |||||||||||   |||||||| ||||||| |||||| |||||    
T  20415663 tccccatgagtttagctcattttgtaagggataatgcacaatatgtgcaggggccagggttcgaaccccggacaccccacttattcatctttaaggtgaa 20415564  T
Q  224 tttct 228  Q
    |||||    
T  20415563 tttct 20415559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 124 - 192
Target Start/End: Original strand, 24466825 - 24466893
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccct 192  Q
    |||||||| ||||||||||||||||| | ||||||||||| | ||| |||||| || ||||||||||||    
T  24466825 gtccccataagcttagctcatttggtgaaggataatgcatatatatgcaggggacggggttcgaaccct 24466893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 195 - 246
Target Start/End: Complemental strand, 5641720 - 5641669
Alignment:
Q  195 acaccccatttattcacctttaatgtgaatttctttaaccgctagactactt 246  Q
    |||||||| |||||||||||||| |||||||||| || ||||||||||||||    
T  5641720 acaccccacttattcacctttaaggtgaatttctctagccgctagactactt 5641669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 172 - 228
Target Start/End: Original strand, 11611411 - 11611467
Alignment:
Q  172 aggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttct 228  Q
    |||||| | ||||||||||||  |||||||| ||||||| |||||||||||||||||    
T  11611411 aggggctggggttcgaaccctggacaccccacttattcatctttaatgtgaatttct 11611467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 162
Target Start/End: Complemental strand, 18618643 - 18618603
Alignment:
Q  122 ttgtccccatgagcttagctcatttggtaagggataatgca 162  Q
    ||||||||||||||||||||||||||||||  |||||||||    
T  18618643 ttgtccccatgagcttagctcatttggtaaaagataatgca 18618603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 162
Target Start/End: Complemental strand, 24794991 - 24794959
Alignment:
Q  130 atgagcttagctcatttggtaagggataatgca 162  Q
    |||||||||||||||||||||||||||||||||    
T  24794991 atgagcttagctcatttggtaagggataatgca 24794959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 14981804 - 14981699
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgcatt--tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtg 221  Q
    |||||| ||||| ||||||| |||| | |||| ||||||||  | ||| ||||||||| ||||||||||||  |||||||| |||||||| || || |||    
T  14981804 gtccccgtgagcatagctcagttggca-gggacaatgcattattatatgcaggggccggggttcgaaccctggacaccccacttattcactttaaaagtg 14981706  T
Q  222 aatttct 228  Q
    |||||||    
T  14981705 aatttct 14981699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 128 - 159
Target Start/End: Original strand, 25045737 - 25045768
Alignment:
Q  128 ccatgagcttagctcatttggtaagggataat 159  Q
    ||||||||||||||||||||||||||||||||    
T  25045737 ccatgagcttagctcatttggtaagggataat 25045768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 128 - 169
Target Start/End: Complemental strand, 4096661 - 4096621
Alignment:
Q  128 ccatgagcttagctcatttggtaagggataatgcatttgtat 169  Q
    |||||||||||||||||||||||||||||  |||||||||||    
T  4096661 ccatgagcttagctcatttggtaagggat-ttgcatttgtat 4096621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 21874322 - 21874285
Alignment:
Q  125 tccccatgagcttagctcatttggtaagggataatgca 162  Q
    ||||||| |||||| |||||||||||||||||||||||    
T  21874322 tccccataagcttaactcatttggtaagggataatgca 21874285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 30422207 - 30422174
Alignment:
Q  127 cccatgagcttagctcatttggtaagggataatg 160  Q
    |||||||||||| |||||||||||||||||||||    
T  30422207 cccatgagcttaactcatttggtaagggataatg 30422174  T

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Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 123 - 228
Target Start/End: Original strand, 9064858 - 9064964
Alignment:
Q  123 tgtccccatgagcttagctcatttggtaagggataatgcatt--tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgt 220  Q
    ||||||| ||||| ||||||| |||| | |||| ||||||||  | ||| ||||||||| ||||||||||| | |||||||| ||||| || || || ||    
T  9064858 tgtccccgtgagcatagctcagttggca-gggacaatgcattattatatgcaggggccggggttcgaaccccagacaccccacttatttactttaaaagt 9064956  T
Q  221 gaatttct 228  Q
    ||||||||    
T  9064957 gaatttct 9064964  T

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Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 134 - 162
Target Start/End: Original strand, 19748102 - 19748130
Alignment:
Q  134 gcttagctcatttggtaagggataatgca 162  Q
    |||||||||||||||||||||||||||||    
T  19748102 gcttagctcatttggtaagggataatgca 19748130  T

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Target: chr1 (Bit Score: 56; Significance: 6e-23; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 124 - 231
Target Start/End: Original strand, 35309718 - 35309825
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaa 223  Q
    |||||||||||||||||||||||||||||||||||| ||||||||| ||||||  |  | ||||||||   |||||||| ||||||| |||||| |||||    
T  35309718 gtccccatgagcttagctcatttggtaagggataatacatttgtatgcaggggttggaggtcgaaccccgaacaccccacttattcatctttaaggtgaa 35309817  T
Q  224 tttcttta 231  Q
    ||||||||    
T  35309818 tttcttta 35309825  T

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Target: chr1; HSP #2
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 140 - 246
Target Start/End: Complemental strand, 2350460 - 2350354
Alignment:
Q  140 ctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgctag 239  Q
    |||||||||||| ||||||| ||||||||| ||||| | | |||||||||||   |||||||| |||||||||||||| ||||||||||||| |||||||    
T  2350460 ctcatttggtaatggataatacatttgtatgcagggactggggttcgaaccccgaacaccccacttattcacctttaaagtgaatttctttagccgctag 2350361  T
Q  240 actactt 246  Q
     ||||||    
T  2350360 gctactt 2350354  T

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Target: chr1; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 135 - 246
Target Start/End: Original strand, 19424050 - 19424162
Alignment:
Q  135 cttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaac 233  Q
    ||||||||||||| ||||||||||||||| || ||| |||||| || |||||||||||   |||||||| |||||||||||||| |||||||||| || |    
T  19424050 cttagctcatttgataagggataatgcatattatatgcaggggtcggggttcgaaccccggacaccccacttattcacctttaaggtgaatttctctagc 19424149  T
Q  234 cgctagactactt 246  Q
    |||||| ||||||    
T  19424150 cgctaggctactt 19424162  T

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Target: chr1; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 124 - 246
Target Start/End: Complemental strand, 34702415 - 34702292
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 222  Q
    |||||||||||||||||||||||||||||||||||||||   | | | ||||||||| |||||||||||   ||||| || ||||||| ||||||  |||    
T  34702415 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacacctcacttattcatctttaagatga 34702316  T
Q  223 atttctttaaccgctagactactt 246  Q
    ||||||||| || |||||||||||    
T  34702315 atttctttagccactagactactt 34702292  T

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Target: chr1; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 122 - 246
Target Start/End: Complemental strand, 43109342 - 43109217
Alignment:
Q  122 ttgtccccatgagcttagctcatttggtaagggataatgc-atttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgt 220  Q
    ||||| |||||||||||||||||||||||||||||||||| |  | | | ||||||||| |||||||||||   ||||| |||||||||| |||||| ||    
T  43109342 ttgtctccatgagcttagctcatttggtaagggataatgcaaaatatgtgcaggggccggggttcgaaccccggacacctcatttattcatctttaaggt 43109243  T
Q  221 gaatttctttaaccgctagactactt 246  Q
    |||||||| || || |||| ||||||    
T  43109242 gaatttctctagccactaggctactt 43109217  T

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Target: chr1; HSP #6
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 131 - 246
Target Start/End: Original strand, 22779223 - 22779339
Alignment:
Q  131 tgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctt 229  Q
    ||||||||||||| ||||||||||||||||||| || ||| |||| | || ||||||||||| | |||||||| ||||||||||||||  |||||||||     
T  22779223 tgagcttagctcacttggtaagggataatgcatattttatacaggagtcggggttcgaaccccaaacaccccacttattcacctttaaaatgaatttctc 22779322  T
Q  230 taaccgctagactactt 246  Q
    || ||  ||||||||||    
T  22779323 tagccaatagactactt 22779339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 125 - 228
Target Start/End: Complemental strand, 24134725 - 24134621
Alignment:
Q  125 tccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaa 223  Q
    ||||||||||||||||||||||||||||||||||||||   | | | ||||||||| |||||||||||   |||||||| ||||||| |||||| |||||    
T  24134725 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaa 24134626  T
Q  224 tttct 228  Q
    |||||    
T  24134625 tttct 24134621  T

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Target: chr1; HSP #8
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 127 - 246
Target Start/End: Original strand, 7438617 - 7438737
Alignment:
Q  127 cccatgagcttagctcatttggtaagggataatgc---atttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaa 223  Q
    |||||||||||||||||||||||||||||||||||   |||||| |  ||||| || ||||||||| |   |||||||| ||||||| ||| || |||||    
T  7438617 cccatgagcttagctcatttggtaagggataatgcacaatttgtgt--aggggtcggggttcgaactccggacaccccacttattcatcttaaaggtgaa 7438714  T
Q  224 tttctttaaccgctagactactt 246  Q
    |||||||| || |||||||||||    
T  7438715 tttctttagccactagactactt 7438737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 122 - 246
Target Start/End: Complemental strand, 12973382 - 12973257
Alignment:
Q  122 ttgtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgt 220  Q
    ||||||||||||| |||||||||||||||||||||||||||   | ||| ||||||||| | ||| ||| |   |||||||| ||||||| |||||| ||    
T  12973382 ttgtccccatgagtttagctcatttggtaagggataatgcacaatatatgcaggggccgagattcaaactcctgacaccccacttattcatctttaaggt 12973283  T
Q  221 gaatttctttaaccgctagactactt 246  Q
     |||||||||| || |||||||||||    
T  12973282 aaatttctttagccactagactactt 12973257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 50011500 - 50011605
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 222  Q
    |||||||||||||||||||||||||||||||||||||||   | | | ||||||| | ||||||||||| | ||| |||| ||||||| |||||| ||||    
T  50011500 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggctggggttcgaaccccagacatcccacttattcatctttaaggtga 50011599  T
Q  223 atttct 228  Q
    ||||||    
T  50011600 atttct 50011605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 8893851 - 8893958
Alignment:
Q  122 ttgtccccatgagcttagctcatttggtaagggataatgc---atttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaat 218  Q
    |||||| ||||||||||| |||||||||||||||||||||   || ||||  |||||| || ||||||||||| | |||||||| ||||||| ||||||     
T  8893851 ttgtccacatgagcttagttcatttggtaagggataatgcacaatatgta--caggggtcggggttcgaaccccaaacaccccacttattcatctttaag 8893948  T
Q  219 gtgaatttct 228  Q
    ||||||||||    
T  8893949 gtgaatttct 8893958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 126 - 248
Target Start/End: Original strand, 17916702 - 17916821
Alignment:
Q  126 ccccatgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaat 224  Q
    |||| ||||||||||||||||||||| |||||||| ||| | ||| |||||| || |||||||||    ||||||| | |  ||||||||||||||||||    
T  17916702 ccccgtgagcttagctcatttggtaaaggataatgtattatatatgcaggggtcggggttcgaac----tacaccctactatttcacctttaatgtgaat 17916797  T
Q  225 ttctttaaccgctagactacttaa 248  Q
    ||||  ||||||||| ||||||||    
T  17916798 ttctccaaccgctaggctacttaa 17916821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 124 - 246
Target Start/End: Original strand, 29332279 - 29332400
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaa 223  Q
    ||||||||||||||| |||| ||| |||||||||||| || |  || || |||||| |||| ||||||   |||||||| |||||||||||||| |||||    
T  29332279 gtccccatgagcttaactcacttgataagggataatgtatata-atgcatgggccggggtttgaaccccggacaccccacttattcacctttaaggtgaa 29332377  T
Q  224 tttctttaaccgctagactactt 246  Q
    ||||| || ||||||| ||||||    
T  29332378 tttctctagccgctaggctactt 29332400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 44583579 - 44583685
Alignment:
Q  122 ttgtccccatgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtg 221  Q
    |||| |||||||||||| |||||||| ||||||||||| |||||||||  ||||| || ||||||||| |   |||| |||  ||||||||||||| |||    
T  44583579 ttgttcccatgagcttaactcatttgataagggataatacatttgtatgtaggggtcggggttcgaactccggacactccacctattcacctttaaggtg 44583678  T
Q  222 aatttct 228  Q
    |||||||    
T  44583679 aatttct 44583685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 122 - 163
Target Start/End: Complemental strand, 39304307 - 39304266
Alignment:
Q  122 ttgtccccatgagcttagctcatttggtaagggataatgcat 163  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  39304307 ttgtccccatgagcttagctcatttggtaagggataatgcat 39304266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 131 - 246
Target Start/End: Complemental strand, 35195706 - 35195590
Alignment:
Q  131 tgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctt 229  Q
    ||||||||||||| ||  ||||||||||||||| || ||| ||||| ||  |||||||||||  ||||| ||| |||||||||||||| || |||||||     
T  35195706 tgagcttagctcacttaataagggataatgcatattatatgcagggaccagggttcgaaccccgtacactccacttattcacctttaaggtaaatttctc 35195607  T
Q  230 taaccgctagactactt 246  Q
    || ||||||| ||||||    
T  35195606 tagccgctaggctactt 35195590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 246
Target Start/End: Complemental strand, 40210014 - 40209894
Alignment:
Q  127 cccatgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatt 225  Q
    ||||||||||||| ||| ||||||||||| ||||||| || |||  ||||| ||  |||||||||| | ||||| ||||| ||||||||||| |||||||    
T  40210014 cccatgagcttagatcacttggtaagggacaatgcatattatatgtaggggtcgaagttcgaaccccaaacacctcattttttcacctttaaggtgaatt 40209915  T
Q  226 tctttaaccgctagactactt 246  Q
    ||| |  || |||||||||||    
T  40209914 tctctggccactagactactt 40209894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 127 - 238
Target Start/End: Complemental strand, 46532594 - 46532482
Alignment:
Q  127 cccatgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatt 225  Q
    |||||||||||| |||||||||||||| |||||| ||| ||||| | ||||||| | |||||||   | |||||||| |  ||||||||||| |||||||    
T  46532594 cccatgagcttaactcatttggtaaggaataatgtattatgtatgctggggccgggattcgaacttcagacaccccactatttcacctttaaggtgaatt 46532495  T
Q  226 tctttaaccgcta 238  Q
    ||| |||||||||    
T  46532494 tctctaaccgcta 46532482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 124 - 246
Target Start/End: Original strand, 4126892 - 4127015
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 222  Q
    ||||||||||| |||||||||||||||||||||||||||   | ||| ||| |||||  ||| |||| |   |||||||||||||||| |||||| ||||    
T  4126892 gtccccatgagtttagctcatttggtaagggataatgcacaatatatgcagaggccgatgtttgaacaccggacaccccatttattcatctttaaggtga 4126991  T
Q  223 atttctttaaccgctagactactt 246  Q
    |||| | || || |||||||||||    
T  4126992 atttatctagccactagactactt 4127015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 121 - 249
Target Start/End: Original strand, 25421844 - 25421974
Alignment:
Q  121 attgtccccatgagcttagctcatttggtaagggataatgc---atttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctt-ta 216  Q
    |||||||||||||||||| |||||||||||||||| |||||   |||||| |  |||||| | ||||| ||||| | |||| ||| |||||||||||  |    
T  25421844 attgtccccatgagcttaactcatttggtaagggacaatgcacaatttgtgt--aggggctggggttcaaaccccagacactccacttattcaccttaaa 25421941  T
Q  217 atgtgaatttctttaaccgctagactacttaac 249  Q
    | |||||||||| ||||| ||| ||||||||||    
T  25421942 aggtgaatttctctaaccactaaactacttaac 25421974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 124 - 246
Target Start/End: Original strand, 49619965 - 49620088
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 222  Q
    |||||||||||||||||||||||||||||||||||||||   | | | |||||| || |||||  ||||   |||||||| ||||||| |||||| ||||    
T  49619965 gtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggtcggggttcagaccccggacaccccacttattcatctttaaagtga 49620064  T
Q  223 atttctttaaccgctagactactt 246  Q
    |||||| || || |||| ||||||    
T  49620065 atttctctagccactaggctactt 49620088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 124 - 162
Target Start/End: Original strand, 27054683 - 27054721
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgca 162  Q
    |||||||||||||||||||||||||||||||||||||||    
T  27054683 gtccccatgagcttagctcatttggtaagggataatgca 27054721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 122 - 162
Target Start/End: Complemental strand, 2017788 - 2017748
Alignment:
Q  122 ttgtccccatgagcttagctcatttggtaagggataatgca 162  Q
    |||||| ||||||||||||||||||||||||||||||||||    
T  2017788 ttgtcctcatgagcttagctcatttggtaagggataatgca 2017748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 124 - 246
Target Start/End: Complemental strand, 24253745 - 24253622
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 222  Q
    |||||||||||||||||||| ||| |||||||||||||||  | ||| |||||| || | ||||||||  | ||| |  | |||||| |||||||  |||    
T  24253745 gtccccatgagcttagctcacttgataagggataatgcataatttatgcaggggtcgggattcgaacctcagacatcttacttattcgcctttaagatga 24253646  T
Q  223 atttctttaaccgctagactactt 246  Q
    |||||| |||||| ||||||||||    
T  24253645 atttctctaaccgttagactactt 24253622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 124 - 159
Target Start/End: Complemental strand, 35527603 - 35527568
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataat 159  Q
    ||||||||||||||||||||||||||||||||||||    
T  35527603 gtccccatgagcttagctcatttggtaagggataat 35527568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 127 - 162
Target Start/End: Original strand, 47651868 - 47651903
Alignment:
Q  127 cccatgagcttagctcatttggtaagggataatgca 162  Q
    ||||||||||||||||||||||||||||||||||||    
T  47651868 cccatgagcttagctcatttggtaagggataatgca 47651903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 128 - 246
Target Start/End: Complemental strand, 10123150 - 10123032
Alignment:
Q  128 ccatgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttc 227  Q
    ||||||||||| ||||||||||||||||||||     | | |  ||||| || ||||||||||| | |||||||| ||||||| |||||| |||||||||    
T  10123150 ccatgagcttaactcatttggtaagggataattacaatatgtgtaggggtcggggttcgaaccccaaacaccccacttattcatctttaaggtgaatttc 10123051  T
Q  228 tttaaccgctagactactt 246  Q
    | || || |||| ||||||    
T  10123050 tctagccactaggctactt 10123032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 15417919 - 15417881
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgca 162  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  15417919 gtccccatgagcttagctcatttggtaaaggataatgca 15417881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 162
Target Start/End: Original strand, 15550879 - 15550917
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgca 162  Q
    ||||||||||||||| |||||||||||||||||||||||    
T  15550879 gtccccatgagcttatctcatttggtaagggataatgca 15550917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 35527437 - 35527399
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgca 162  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  35527437 gtccccatgaacttagctcatttggtaagggataatgca 35527399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 120 - 162
Target Start/End: Original strand, 50064999 - 50065041
Alignment:
Q  120 aattgtccccatgagcttagctcatttggtaagggataatgca 162  Q
    |||||||||||| ||||||||||||||| ||||||||||||||    
T  50064999 aattgtccccataagcttagctcatttgataagggataatgca 50065041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 181 - 246
Target Start/End: Original strand, 52720735 - 52720800
Alignment:
Q  181 ggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgctagactactt 246  Q
    ||||||||||| | ||||| || ||||||| |||||| |||||||||| ||||| |||||||||||    
T  52720735 ggttcgaaccccagacaccacacttattcatctttaaagtgaatttctctaaccactagactactt 52720800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 226
Target Start/End: Complemental strand, 23368831 - 23368731
Alignment:
Q  127 cccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatt 225  Q
    ||||||||||||||||||||| ||||||||||||||  || | | ||||| |||  ||||||||||   |||||||| |||||||| || || |||||||    
T  23368831 cccatgagcttagctcatttgataagggataatgcacattttgtgcagggaccgatgttcgaaccccggacaccccacttattcacattaaaggtgaatt 23368732  T
Q  226 t 226  Q
    |    
T  23368731 t 23368731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 124 - 246
Target Start/End: Original strand, 40061436 - 40061559
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgc---atttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgt 220  Q
    ||||||||||||||| |||||||||||||||||| |||   || |||||  |||||| | ||||||||| |   |||||||| ||||||| |||||| ||    
T  40061436 gtccccatgagcttaactcatttggtaagggatagtgcacaatatgtat--aggggctggggttcgaactccggacaccccacttattcatctttaaggt 40061533  T
Q  221 gaatttctttaaccgctagactactt 246  Q
    | |||||| || || |||| ||||||    
T  40061534 ggatttctctagccactaggctactt 40061559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 131 - 163
Target Start/End: Original strand, 40513237 - 40513269
Alignment:
Q  131 tgagcttagctcatttggtaagggataatgcat 163  Q
    |||||||||||||||||||||||||||||||||    
T  40513237 tgagcttagctcatttggtaagggataatgcat 40513269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 127 - 246
Target Start/End: Complemental strand, 48497312 - 48497192
Alignment:
Q  127 cccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatt 225  Q
    |||||||| |||||||||||||||||||||||||||   | | | |||||||||  ||||||| ||   |||| ||||||||||| |||||| || ||||    
T  48497312 cccatgagtttagctcatttggtaagggataatgcacaatatgtgcaggggccggagttcgaatcccggacactccatttattcatctttaaggtaaatt 48497213  T
Q  226 tctttaaccgctagactactt 246  Q
    ||| || || |||| ||||||    
T  48497212 tctctagccactaggctactt 48497192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 125 - 160
Target Start/End: Complemental strand, 16986027 - 16985992
Alignment:
Q  125 tccccatgagcttagctcatttggtaagggataatg 160  Q
    |||||||||| |||||||||||||||||||||||||    
T  16986027 tccccatgagtttagctcatttggtaagggataatg 16985992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 163
Target Start/End: Original strand, 48813727 - 48813766
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgcat 163  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  48813727 gtccccatgagcttatttcatttggtaagggataatgcat 48813766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 122 - 160
Target Start/End: Complemental strand, 4684281 - 4684243
Alignment:
Q  122 ttgtccccatgagcttagctcatttggtaagggataatg 160  Q
    ||||||||| ||||||| |||||||||||||||||||||    
T  4684281 ttgtccccacgagcttacctcatttggtaagggataatg 4684243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 127 - 228
Target Start/End: Complemental strand, 14262820 - 14262718
Alignment:
Q  127 cccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatt 225  Q
    |||||||| ||| |||||||| ||||||||||||||   | ||| |||||| || |||||||||||   |||||| | ||||||| |||||| |||||||    
T  14262820 cccatgagattaactcatttgataagggataatgcacaatatatgcaggggtcggggttcgaaccccggacaccctacttattcatctttaaggtgaatt 14262721  T
Q  226 tct 228  Q
    |||    
T  14262720 tct 14262718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 22386338 - 22386300
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgca 162  Q
    ||||||| ||||||||||||||||||||||||| |||||    
T  22386338 gtccccacgagcttagctcatttggtaagggattatgca 22386300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 130 - 246
Target Start/End: Original strand, 30735827 - 30735944
Alignment:
Q  130 atgagcttagctcatttggtaagggataatgc---atttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaattt 226  Q
    ||||||||| ||||||||||||||||||||||   |||||  | |||||||||  ||| |||||||  ||||| || ||||||| ||  || ||||||||    
T  30735827 atgagcttaactcatttggtaagggataatgcacaatttg--tgcaggggccggagtttgaaccctggacaccacacttattcatctcaaaggtgaattt 30735924  T
Q  227 ctttaaccgctagactactt 246  Q
    || ||||| |||| ||||||    
T  30735925 ctctaaccactaggctactt 30735944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 125 - 202
Target Start/End: Complemental strand, 35605695 - 35605618
Alignment:
Q  125 tccccatgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacacccca 202  Q
    ||||| ||||||||||||| |||||| |||||| ||||| || ||| |||||| || ||||||||||||| ||||||||    
T  35605695 tccccgtgagcttagctcagttggta-gggatattgcatattatatgcaggggtcggggttcgaaccctaaacacccca 35605618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 181 - 231
Target Start/End: Complemental strand, 47428939 - 47428889
Alignment:
Q  181 ggttcgaaccctatacaccccatttattcacctttaatgtgaatttcttta 231  Q
    ||||||||||| | |||||||| ||||||| |||||| |||||||||||||    
T  47428939 ggttcgaaccccaaacaccccacttattcatctttaaagtgaatttcttta 47428889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 163
Target Start/End: Complemental strand, 2466037 - 2465996
Alignment:
Q  122 ttgtccccatgagcttagctcatttggtaagggataatgcat 163  Q
    ||||||||||| | ||||||||||||||||||||| ||||||    
T  2466037 ttgtccccatgtgtttagctcatttggtaagggatgatgcat 2465996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 122 - 228
Target Start/End: Original strand, 39238707 - 39238814
Alignment:
Q  122 ttgtccccatgagcttagctcatttggtaagggataatgcatt--tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatg 219  Q
    |||||||| ||||| ||||||| |||| | |||| ||||||||  | ||| ||||||||| |||||||||||   |||||||| |||||||| || || |    
T  39238707 ttgtccccgtgagcatagctcagttggca-gggacaatgcattattatatgcaggggccgaggttcgaaccccggacaccccacttattcactttaaaag 39238805  T
Q  220 tgaatttct 228  Q
    |||||||||    
T  39238806 tgaatttct 39238814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 150 - 246
Target Start/End: Complemental strand, 42946543 - 42946446
Alignment:
Q  150 aagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgctagactactt 246  Q
    |||||||||||||| || ||| ||||||| | |||| ||||||   |||||||| ||||||||||| || |||||||||| || ||| ||| ||||||    
T  42946543 aagggataatgcatattatatgcaggggctggggtttgaaccccggacaccccacttattcaccttaaaggtgaatttctctagccgttaggctactt 42946446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 131 - 219
Target Start/End: Complemental strand, 52426979 - 52426891
Alignment:
Q  131 tgagcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatg 219  Q
    ||||||||||||| ||| || |||||| ||||| || ||| ||||||||||||||||||| | | ||||||||||| | ||| |||||||    
T  52426979 tgagcttagctcagttgata-gggatattgcatattatatgcaggggccgtggttcgaactccagacaccccatttctccacatttaatg 52426891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 9e-22; HSPs: 21)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 122 - 246
Target Start/End: Complemental strand, 38503361 - 38503236
Alignment:
Q  122 ttgtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgt 220  Q
    |||||||||||||||||||||||||||||||||||||||||   | | | ||||||||| |||||||||||   |||||||| ||||||| |||||| ||    
T  38503361 ttgtccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggt 38503262  T
Q  221 gaatttctttaaccgctagactactt 246  Q
    |||||||| || ||  ||||||||||    
T  38503261 gaatttctctagccaatagactactt 38503236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 31250141 - 31250245
Alignment:
Q  125 tccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaa 223  Q
    ||||||||||||||||||||||||||||||||||||||   | | | ||||||||| |||||||||||   |||||||| ||||||| |||||| |||||    
T  31250141 tccccatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaa 31250240  T
Q  224 tttct 228  Q
    |||||    
T  31250241 tttct 31250245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 131 - 246
Target Start/End: Original strand, 20191442 - 20191557
Alignment:
Q  131 tgagcttagctcatttggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttcttt 230  Q
    |||||||| |||| ||||||||||||||||||||| ||| |||||| || |||||||||||   |||| ||| |||||||||||||| || ||||||| |    
T  20191442 tgagcttaactcacttggtaagggataatgcatttatatgcaggggtcggggttcgaaccccggacactccacttattcacctttaaggtaaatttctct 20191541  T
Q  231 aaccgctagactactt 246  Q
      || |||||||||||    
T  20191542 ggccactagactactt 20191557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 125 - 228
Target Start/End: Original strand, 43227860 - 43227964
Alignment:
Q  125 tccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaa 223  Q
    |||| |||||||||||||||||||||||||||||||||   | | | ||||||||| |||||||||||   |||||||| ||||||| |||||| |||||    
T  43227860 tccctatgagcttagctcatttggtaagggataatgcacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtgaa 43227959  T
Q  224 tttct 228  Q
    |||||    
T  43227960 tttct 43227964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 140 - 246
Target Start/End: Original strand, 34729481 - 34729587
Alignment:
Q  140 ctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaaccgcta 238  Q
    |||| ||||||||||||||||||| || ||| |||||| || |||||||||||   |||||||| |||||||||||||| |||||||||| ||||||||     
T  34729481 ctcacttggtaagggataatgcatattatatgcaggggtcggggttcgaacccgg-acaccccacttattcacctttaaggtgaatttctctaaccgctt 34729579  T
Q  239 gactactt 246  Q
     |||||||    
T  34729580 aactactt 34729587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 124 - 228
Target Start/End: Complemental strand, 4395953 - 4395848
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 222  Q
    ||||||||||||||| ||||||||| ||  ||||||||||  ||| | |||||||||  ||||||||||   |||||||||||||||| |||||| ||||    
T  4395953 gtccccatgagcttaactcatttggcaaatgataatgcataatgtgtgcaggggccggagttcgaacccctgacaccccatttattcatctttaaggtga 4395854  T
Q  223 atttct 228  Q
    ||||||    
T  4395853 atttct 4395848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 121 - 246
Target Start/End: Original strand, 3294073 - 3294199
Alignment:
Q  121 attgtccccatgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatg 219  Q
    ||||||||| |||||||| || | ||| |||||||||||||||  | ||| ||||||||| ||||||||  |   ||| |||||||||||| |||||| |    
T  3294073 attgtccccgtgagcttaacttacttgttaagggataatgcataatttatgcaggggccggggttcgaattccggacaacccatttattcatctttaagg 3294172  T
Q  220 tgaatttctttaaccgctagactactt 246  Q
    ||||||||| ||  |||||||||||||    
T  3294173 tgaatttctatagtcgctagactactt 3294199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 123 - 246
Target Start/End: Complemental strand, 15470724 - 15470600
Alignment:
Q  123 tgtccccatgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtg 221  Q
    |||||| |||||||||  ||||||||||||||||||||||   | | | || |||| | | ||||||||| | |||||||||||||||| |||||| |||    
T  15470724 tgtccctatgagcttaattcatttggtaagggataatgcacaatatgtgcaagggctgagattcgaaccccagacaccccatttattcatctttaaggtg 15470625  T
Q  222 aatttctttaaccgctagactactt 246  Q
    ||||||| || || ||| |||||||    
T  15470624 aatttctctagccactaaactactt 15470600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 195 - 246
Target Start/End: Complemental strand, 15680931 - 15680880
Alignment:
Q  195 acaccccatttattcacctttaatgtgaatttctttaaccgctagactactt 246  Q
    |||||||| |||||||||||||| |||||||||| |||||||||| ||||||    
T  15680931 acaccccacttattcacctttaaggtgaatttctctaaccgctaggctactt 15680880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 12375514 - 12375476
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgca 162  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  12375514 gtccccatgagcttagctcatttggtaatggataatgca 12375476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 121 - 162
Target Start/End: Original strand, 87781 - 87822
Alignment:
Q  121 attgtccccatgagcttagctcatttggtaagggataatgca 162  Q
    |||||||||||||||| | |||||||||||||||||||||||    
T  87781 attgtccccatgagctcaactcatttggtaagggataatgca 87822  T

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Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 124 - 188
Target Start/End: Complemental strand, 31991863 - 31991798
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgcatt-tgtatccaggggccgtggttcgaa 188  Q
    |||||| ||||||||||||| |||||||||||||||||||| | ||| |||||| || ||||||||    
T  31991863 gtccccttgagcttagctcacttggtaagggataatgcattatatatgcaggggtcggggttcgaa 31991798  T

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Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 122 - 162
Target Start/End: Complemental strand, 1984293 - 1984253
Alignment:
Q  122 ttgtccccatgagcttagctcatttggtaagggataatgca 162  Q
    |||||| |||||||||| |||||||||||||||||||||||    
T  1984293 ttgtccacatgagcttaactcatttggtaagggataatgca 1984253  T

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Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 130 - 162
Target Start/End: Original strand, 17077360 - 17077392
Alignment:
Q  130 atgagcttagctcatttggtaagggataatgca 162  Q
    |||||||||||||||||||||||||||||||||    
T  17077360 atgagcttagctcatttggtaagggataatgca 17077392  T

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Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 123 - 162
Target Start/End: Original strand, 43263205 - 43263244
Alignment:
Q  123 tgtccccatgagcttagctcatttggtaagggataatgca 162  Q
    |||||||||||||||| ||||||||||||| |||||||||    
T  43263205 tgtccccatgagcttaactcatttggtaagagataatgca 43263244  T

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Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 124 - 162
Target Start/End: Original strand, 13576316 - 13576354
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgca 162  Q
    |||| |||||||||| |||||||||||||||||||||||    
T  13576316 gtcctcatgagcttaactcatttggtaagggataatgca 13576354  T

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Target: chr5; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 181 - 234
Target Start/End: Original strand, 38435970 - 38436023
Alignment:
Q  181 ggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaacc 234  Q
    ||||||||||  | |||||| | |||||||||||||| ||||||||||||||||    
T  38435970 ggttcgaaccacagacaccctacttattcacctttaaggtgaatttctttaacc 38436023  T

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Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 131 - 163
Target Start/End: Complemental strand, 1931872 - 1931840
Alignment:
Q  131 tgagcttagctcatttggtaagggataatgcat 163  Q
    ||||||||||| |||||||||||||||||||||    
T  1931872 tgagcttagcttatttggtaagggataatgcat 1931840  T

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Target: chr5; HSP #19
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 174 - 214
Target Start/End: Complemental strand, 2058304 - 2058264
Alignment:
Q  174 gggccgtggttcgaaccctatacaccccatttattcacctt 214  Q
    |||||| ||||||||||| ||||||| ||||||||||||||    
T  2058304 gggccgaggttcgaaccccatacacctcatttattcacctt 2058264  T

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Target: chr5; HSP #20
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 202 - 246
Target Start/End: Complemental strand, 12256519 - 12256475
Alignment:
Q  202 atttattcacctttaatgtgaatttctttaaccgctagactactt 246  Q
    |||||||||||||||| |||||||||| || ||||||| ||||||    
T  12256519 atttattcacctttaaggtgaatttctctagccgctaggctactt 12256475  T

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Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 127 - 159
Target Start/End: Original strand, 42208913 - 42208945
Alignment:
Q  127 cccatgagcttagctcatttggtaagggataat 159  Q
    |||||||||||||||||||| ||||||||||||    
T  42208913 cccatgagcttagctcatttagtaagggataat 42208945  T

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Target: scaffold0001 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 124 - 246
Target Start/End: Original strand, 419705 - 419828
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgca-tttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtga 222  Q
    ||||||||||||||||||||||||||||||||||||| |   | | | ||||||||| |||||||||||   |||||||| ||||||| |||||| ||||    
T  419705 gtccccatgagcttagctcatttggtaagggataatgaacaatatgtgcaggggccggggttcgaaccccggacaccccacttattcatctttaaggtga 419804  T
Q  223 atttctttaaccgctagactactt 246  Q
    |||||| || || |||| ||||||    
T  419805 atttctctagccactaggctactt 419828  T

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Target: scaffold0054 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0054
Description:

Target: scaffold0054; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 134 - 247
Target Start/End: Original strand, 22462 - 22576
Alignment:
Q  134 gcttagctcatttggtaagggataatgcat-ttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttctttaa 232  Q
    |||||||||| ||||||||||||||| ||| || |||  |||||| | ||||||||||| | ||| |||| |||||||  ||||| |||||||| ||||     
T  22462 gcttagctcacttggtaagggataatacatattatatgtaggggctgaggttcgaaccccagacatcccacttattcatttttaaggtgaatttttttag 22561  T
Q  233 ccgctagactactta 247  Q
     |||||| |||||||    
T  22562 tcgctagtctactta 22576  T

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Target: scaffold0018 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 124 - 162
Target Start/End: Complemental strand, 121901 - 121863
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgca 162  Q
    ||||||||||||||||||||||||||| |||||||||||    
T  121901 gtccccatgagcttagctcatttggtaggggataatgca 121863  T

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Target: scaffold0011 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 147 - 231
Target Start/End: Complemental strand, 15409 - 15325
Alignment:
Q  147 ggtaagggataatgcatttgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtgaatttcttta 231  Q
    ||||||||||||||||| | ||| |||||| || ||||||||||| | ||| | || | ||||| |||||| |||||||||||||    
T  15409 ggtaagggataatgcatatttatgcaggggtcggggttcgaaccccagacatcgcagtcattcatctttaaggtgaatttcttta 15325  T

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Target: scaffold0308 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0308
Description:

Target: scaffold0308; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 124 - 228
Target Start/End: Original strand, 7069 - 7174
Alignment:
Q  124 gtccccatgagcttagctcatttggtaagggataatgcatt--tgtatccaggggccgtggttcgaaccctatacaccccatttattcacctttaatgtg 221  Q
    |||||| ||||| ||||||| ||| || |||| ||||||||  | ||| ||||||||| |||||||||||   ||||||||||||||||| || || |||    
T  7069 gtccccgtgagcatagctcagttgtta-gggacaatgcattattatatgcaggggccggggttcgaaccccggacaccccatttattcactttaaaagtg 7167  T
Q  222 aatttct 228  Q
    |||||||    
T  7168 aatttct 7174  T

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