View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15694_low_12 (Length: 386)
Name: NF15694_low_12
Description: NF15694
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15694_low_12 |
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Alignment Details
Target: chr6 (Bit Score: 296; Significance: 1e-166; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 296; E-Value: 1e-166
Query Start/End: Original strand, 19 - 367
Target Start/End: Original strand, 982661 - 983013
Alignment:
| Q |
19 |
tatgattcataggaatggattgtgtacaatgcatcatgcatgaatagaaacaac----tatatagaataaacagtaatgaatttagtagggttaatacat |
114 |
Q |
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| T |
982661 |
tatgattcataggaatggattgtgtacaatgcatcatgcatgaatagaaacaaccaagtatatagaacaaataataatgaatttagtagggttaatacat |
982760 |
T |
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| Q |
115 |
gtttacctgtcatcattattctcttatcaatcaaatcaaaccataattaaaagaaaaagatcaagtctactgattcacccttcaactctcaaacaattct |
214 |
Q |
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| T |
982761 |
gtttacatgtcatcattattctcttatcaatcaaatcaaaccataattaaaagaaaaagatcatgtctattgattcacccttcaactctcaaacaattct |
982860 |
T |
|
| Q |
215 |
tcaacccagagttaactcagtcaagctttcaaaaatcgttcgatgcaacaagtctctcaaccgacctccatgtgattatgttataatgttgtatgttgtg |
314 |
Q |
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||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
982861 |
tcaacccagagttaactcagtcaggctttcagaaatcattcgatgcaacaagtctctcaaccgacctccacgtgattatgttataatgttgtatgttgtg |
982960 |
T |
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| Q |
315 |
ttcactgattgagattgttctatattgtacattaatgagtttatacatgtgtg |
367 |
Q |
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| T |
982961 |
ttcactgattgagattgttctatattgtacattaatgagtttatacatgtgtg |
983013 |
T |
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