View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15695_low_10 (Length: 217)

Name: NF15695_low_10
Description: NF15695
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15695_low_10
NF15695_low_10
[»] chr5 (36 HSPs)
chr5 (1-48)||(25027691-25027738)
chr5 (1-46)||(13144879-13144924)
chr5 (1-49)||(15569435-15569483)
chr5 (1-47)||(1643342-1643388)
chr5 (1-47)||(37699884-37699930)
chr5 (1-47)||(41989562-41989608)
chr5 (1-46)||(7053647-7053692)
chr5 (1-46)||(9601697-9601742)
chr5 (1-46)||(29374169-29374214)
chr5 (1-39)||(1108289-1108327)
chr5 (1-47)||(7945835-7945881)
chr5 (1-46)||(7749917-7749962)
chr5 (1-46)||(31803062-31803107)
chr5 (1-41)||(41046832-41046872)
chr5 (1-39)||(2959343-2959381)
chr5 (1-39)||(2967812-2967850)
chr5 (1-47)||(6338419-6338465)
chr5 (1-47)||(25027798-25027844)
chr5 (1-47)||(29374274-29374320)
chr5 (1-47)||(36419089-36419135)
chr5 (1-46)||(18353312-18353357)
chr5 (5-50)||(21610409-21610454)
chr5 (1-46)||(37699779-37699824)
chr5 (1-41)||(2959243-2959283)
chr5 (1-41)||(2967712-2967752)
chr5 (5-49)||(20578763-20578807)
chr5 (1-41)||(21090380-21090420)
chr5 (1-48)||(903963-904010)
chr5 (1-47)||(904070-904116)
chr5 (1-47)||(1643448-1643494)
chr5 (1-47)||(13144984-13145030)
chr5 (5-35)||(26898201-26898231)
chr5 (2-47)||(26898296-26898341)
chr5 (1-46)||(31802957-31803002)
chr5 (1-46)||(36417151-36417196)
chr5 (1-34)||(42311914-42311947)
[»] chr4 (37 HSPs)
chr4 (1-48)||(36099484-36099531)
chr4 (1-48)||(53621432-53621479)
chr4 (1-47)||(4758881-4758927)
chr4 (1-46)||(18135417-18135462)
chr4 (1-46)||(49122624-49122669)
chr4 (1-47)||(580515-580561)
chr4 (1-47)||(23125644-23125690)
chr4 (1-49)||(47948935-47948983)
chr4 (1-47)||(20688520-20688566)
chr4 (1-47)||(38688015-38688061)
chr4 (1-46)||(3085976-3086021)
chr4 (1-46)||(27006504-27006549)
chr4 (1-46)||(44200076-44200121)
chr4 (3-39)||(5970385-5970421)
chr4 (1-37)||(18430359-18430395)
chr4 (1-49)||(31227267-31227315)
chr4 (1-36)||(2279533-2279568)
chr4 (1-40)||(6246613-6246652)
chr4 (1-48)||(53621325-53621372)
chr4 (1-47)||(2385299-2385345)
chr4 (1-47)||(4758775-4758821)
chr4 (1-39)||(31854483-31854521)
chr4 (1-39)||(51833018-51833056)
chr4 (1-46)||(39834273-39834318)
chr4 (1-46)||(39877402-39877447)
chr4 (1-49)||(19485676-19485724)
chr4 (1-36)||(7350310-7350345)
chr4 (1-32)||(56216247-56216278)
chr4 (1-47)||(580409-580455)
chr4 (1-47)||(2385193-2385239)
chr4 (1-35)||(2411944-2411978)
chr4 (1-47)||(6246712-6246758)
chr4 (5-47)||(19485570-19485612)
chr4 (1-47)||(36099591-36099637)
chr4 (1-39)||(53303742-53303780)
chr4 (1-47)||(55292110-55292156)
chr4 (1-41)||(54611978-54612018)
[»] chr6 (24 HSPs)
chr6 (1-47)||(22880916-22880962)
chr6 (1-47)||(22898851-22898897)
chr6 (1-47)||(6045785-6045831)
chr6 (1-47)||(24949735-24949781)
chr6 (1-46)||(390909-390954)
chr6 (1-46)||(31971134-31971179)
chr6 (1-47)||(885706-885752)
chr6 (1-47)||(7405442-7405488)
chr6 (1-46)||(14931257-14931302)
chr6 (1-46)||(17225347-17225392)
chr6 (1-49)||(14931357-14931405)
chr6 (1-48)||(885599-885646)
chr6 (1-40)||(30686549-30686588)
chr6 (1-47)||(6047900-6047946)
chr6 (1-47)||(24949629-24949675)
chr6 (1-47)||(33859488-33859534)
chr6 (1-46)||(766531-766576)
chr6 (1-46)||(34639144-34639189)
chr6 (1-35)||(6801655-6801689)
chr6 (1-47)||(7405548-7405594)
chr6 (1-47)||(8558912-8558958)
chr6 (1-47)||(33859594-33859640)
chr6 (1-46)||(8559017-8559062)
chr6 (1-46)||(34639039-34639084)
[»] chr3 (42 HSPs)
chr3 (1-47)||(8243786-8243832)
chr3 (1-47)||(10049666-10049712)
chr3 (1-46)||(9440232-9440277)
chr3 (1-46)||(26999020-26999065)
chr3 (1-45)||(6087005-6087049)
chr3 (1-49)||(14768094-14768142)
chr3 (1-47)||(28945654-28945700)
chr3 (1-46)||(9465175-9465220)
chr3 (1-49)||(10049772-10049820)
chr3 (5-49)||(25846619-25846663)
chr3 (1-41)||(49122948-49122988)
chr3 (1-47)||(42605931-42605977)
chr3 (1-46)||(29019734-29019779)
chr3 (1-46)||(47449915-47449960)
chr3 (1-41)||(25113453-25113493)
chr3 (1-49)||(28945760-28945808)
chr3 (1-49)||(51698218-51698266)
chr3 (1-48)||(6086898-6086945)
chr3 (1-48)||(40215004-40215051)
chr3 (1-35)||(21653448-21653482)
chr3 (1-47)||(26999125-26999171)
chr3 (1-47)||(39341370-39341416)
chr3 (1-35)||(52114128-52114162)
chr3 (1-46)||(379069-379114)
chr3 (2-39)||(18765363-18765400)
chr3 (1-46)||(19202354-19202399)
chr3 (2-47)||(28406465-28406510)
chr3 (2-47)||(28565040-28565085)
chr3 (1-49)||(3484328-3484376)
chr3 (1-41)||(9440132-9440172)
chr3 (4-48)||(28406574-28406618)
chr3 (1-46)||(40464517-40464566)
chr3 (5-41)||(42841877-42841913)
chr3 (1-40)||(335479-335518)
chr3 (1-48)||(23825146-23825193)
chr3 (1-39)||(8243688-8243726)
chr3 (1-35)||(40141978-40142012)
chr3 (1-47)||(51698112-51698158)
chr3 (1-46)||(40214899-40214944)
chr3 (1-37)||(1122379-1122415)
chr3 (1-41)||(19202254-19202294)
chr3 (5-41)||(28564939-28564975)
[»] chr2 (50 HSPs)
chr2 (1-47)||(6761463-6761509)
chr2 (1-46)||(16241371-16241416)
chr2 (1-46)||(25892048-25892093)
chr2 (1-46)||(44737386-44737431)
chr2 (1-49)||(39377832-39377880)
chr2 (1-47)||(18452567-18452613)
chr2 (1-47)||(29866080-29866126)
chr2 (1-50)||(13775706-13775755)
chr2 (1-46)||(20427000-20427045)
chr2 (1-47)||(11711428-11711474)
chr2 (1-39)||(39377935-39377973)
chr2 (1-46)||(41260024-41260069)
chr2 (1-48)||(6761569-6761616)
chr2 (1-40)||(40430770-40430809)
chr2 (1-47)||(30864779-30864825)
chr2 (1-47)||(42263574-42263620)
chr2 (1-46)||(16241266-16241311)
chr2 (1-46)||(45065684-45065729)
chr2 (1-41)||(7765898-7765938)
chr2 (6-50)||(44736773-44736817)
chr2 (1-32)||(3264935-3264966)
chr2 (2-49)||(9152484-9152531)
chr2 (1-32)||(11363102-11363133)
chr2 (5-40)||(38598461-38598496)
chr2 (1-52)||(44737276-44737327)
chr2 (1-47)||(7765792-7765838)
chr2 (1-47)||(30864666-30864712)
chr2 (1-47)||(32750340-32750386)
chr2 (1-47)||(32750446-32750492)
chr2 (1-35)||(43658029-43658063)
chr2 (1-46)||(1944638-1944683)
chr2 (5-46)||(4740709-4740750)
chr2 (2-47)||(12486097-12486142)
chr2 (5-34)||(32880918-32880947)
chr2 (1-46)||(38598560-38598605)
chr2 (1-41)||(2100021-2100061)
chr2 (1-49)||(25891940-25891988)
chr2 (2-46)||(45571029-45571073)
chr2 (2-46)||(45574696-45574740)
chr2 (2-46)||(45578363-45578407)
chr2 (2-46)||(45582030-45582074)
chr2 (2-46)||(45585697-45585741)
chr2 (2-46)||(45589364-45589408)
chr2 (2-46)||(45593031-45593075)
chr2 (2-46)||(45596698-45596742)
chr2 (2-46)||(45600365-45600409)
chr2 (2-46)||(45604032-45604076)
chr2 (2-46)||(45607699-45607743)
chr2 (2-46)||(45611366-45611410)
chr2 (2-46)||(45615033-45615077)
[»] chr1 (34 HSPs)
chr1 (1-47)||(2352307-2352353)
chr1 (1-47)||(14281588-14281634)
chr1 (1-47)||(38830481-38830527)
chr1 (1-47)||(9302023-9302069)
chr1 (1-47)||(23398078-23398124)
chr1 (1-46)||(29312438-29312483)
chr1 (1-47)||(2961208-2961254)
chr1 (1-47)||(9548670-9548716)
chr1 (1-47)||(10380494-10380540)
chr1 (1-47)||(34718889-34718935)
chr1 (1-46)||(24595022-24595067)
chr1 (1-49)||(2352413-2352461)
chr1 (1-41)||(2512415-2512455)
chr1 (1-41)||(45536267-45536307)
chr1 (1-52)||(9548776-9548827)
chr1 (1-48)||(46320253-46320300)
chr1 (1-39)||(28359175-28359213)
chr1 (1-46)||(9301918-9301963)
chr1 (1-46)||(10380389-10380434)
chr1 (1-46)||(23398184-23398229)
chr1 (1-46)||(28989271-28989316)
chr1 (3-47)||(26550393-26550437)
chr1 (1-49)||(33325329-33325377)
chr1 (1-48)||(10065252-10065299)
chr1 (1-40)||(23537425-23537464)
chr1 (1-40)||(26733790-26733829)
chr1 (14-49)||(39720783-39720818)
chr1 (1-47)||(1674076-1674122)
chr1 (1-47)||(2961102-2961148)
chr1 (1-47)||(10065359-10065405)
chr1 (1-31)||(40161277-40161307)
chr1 (1-49)||(14281694-14281743)
chr1 (5-46)||(38830591-38830632)
chr1 (1-49)||(26550283-26550331)
[»] chr8 (30 HSPs)
chr8 (1-46)||(2229174-2229219)
chr8 (1-48)||(2339287-2339334)
chr8 (1-46)||(29563657-29563702)
chr8 (1-46)||(45145868-45145913)
chr8 (1-41)||(12270160-12270200)
chr8 (1-48)||(30924025-30924072)
chr8 (1-47)||(25847965-25848011)
chr8 (5-46)||(11293295-11293336)
chr8 (1-46)||(25848071-25848116)
chr8 (1-46)||(33642457-33642502)
chr8 (1-46)||(33837579-33837624)
chr8 (1-41)||(22781886-22781926)
chr8 (1-41)||(32159138-32159178)
chr8 (1-49)||(41915698-41915746)
chr8 (1-48)||(41915591-41915638)
chr8 (1-47)||(2229068-2229114)
chr8 (5-39)||(37564739-37564773)
chr8 (1-47)||(43135148-43135194)
chr8 (1-46)||(30923920-30923965)
chr8 (1-46)||(34028382-34028427)
chr8 (1-38)||(42351302-42351339)
chr8 (1-46)||(45145969-45146014)
chr8 (2-37)||(27793205-27793240)
chr8 (1-47)||(2339394-2339440)
chr8 (1-39)||(7668197-7668235)
chr8 (1-47)||(29563762-29563808)
chr8 (1-47)||(40465236-40465282)
chr8 (1-39)||(41569200-41569238)
chr8 (1-46)||(27793301-27793346)
chr8 (6-46)||(3799826-3799866)
[»] chr7 (20 HSPs)
chr7 (1-46)||(23248772-23248817)
chr7 (1-47)||(5909575-5909621)
chr7 (1-46)||(35427763-35427808)
chr7 (1-47)||(12763227-12763273)
chr7 (7-46)||(5347832-5347871)
chr7 (1-39)||(3411338-3411376)
chr7 (1-47)||(7107734-7107780)
chr7 (1-47)||(10599420-10599466)
chr7 (1-47)||(12426634-12426680)
chr7 (1-39)||(30866251-30866289)
chr7 (5-46)||(7463448-7463489)
chr7 (1-46)||(20397814-20397859)
chr7 (1-40)||(32050184-32050223)
chr7 (1-48)||(34281773-34281820)
chr7 (1-47)||(12763333-12763379)
chr7 (1-47)||(20397919-20397965)
chr7 (9-46)||(15074621-15074658)
chr7 (1-49)||(5347719-5347767)
chr7 (1-49)||(5909467-5909515)
chr7 (1-49)||(23248664-23248712)
[»] scaffold0024 (2 HSPs)
scaffold0024 (1-47)||(35952-35998)
scaffold0024 (2-46)||(36059-36103)
[»] scaffold0221 (2 HSPs)
scaffold0221 (1-47)||(11028-11074)
scaffold0221 (1-46)||(11134-11179)
[»] scaffold0144 (1 HSPs)
scaffold0144 (1-47)||(38823-38869)
[»] scaffold0123 (2 HSPs)
scaffold0123 (1-46)||(29243-29288)
scaffold0123 (1-41)||(29348-29388)
[»] scaffold2107 (2 HSPs)
scaffold2107 (1-47)||(547-593)
scaffold2107 (1-35)||(453-487)
[»] scaffold0002 (1 HSPs)
scaffold0002 (1-47)||(492409-492455)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-31)||(3744-3774)


Alignment Details
Target: chr5 (Bit Score: 48; Significance: 1e-18; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 25027738 - 25027691
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtata 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  25027738 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtata 25027691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 13144924 - 13144879
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  13144924 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 13144879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 15569435 - 15569483
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtataa 49  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15569435 tatctaaaaagtaaattgtctcttgtaaataggaccggaggaagtataa 15569483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 1643388 - 1643342
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||    
T  1643388 tatctaaaaagtaaattgtctattgtaaataggaccggaggtagtat 1643342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 37699884 - 37699930
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||    
T  37699884 tatctaaaaagtaaattgtctcttgtaaataggaccggatgtagtat 37699930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 41989608 - 41989562
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  41989608 tatctaaaaagtaaattgtctcttgtaaataggaccggaggaagtat 41989562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 7053692 - 7053647
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  7053692 tatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 7053647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 9601697 - 9601742
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  9601697 tatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 9601742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 29374214 - 29374169
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    |||||||||||||||||||||||||||||||||| |||||||||||    
T  29374214 tatctaaaaagtaaattgtctcttgtaaataggatcggaggtagta 29374169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 1108327 - 1108289
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccgga 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  1108327 tatctaaaaagtaaattgtctcttgtaaataggaccgga 1108289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 7945881 - 7945835
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  7945881 tatctaaaaagtaaattgtttcttgtaaataggaccggagggagtat 7945835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 7749962 - 7749917
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||    
T  7749962 tatctaaaaattaaattgtctcttgtaaataggaccggagggagta 7749917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 31803062 - 31803107
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||    
T  31803062 tatctaaaaagtaaattgtttcttgtaaataggaccggagggagta 31803107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 41046872 - 41046832
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggagg 41  Q
    ||||||||||||| |||||||||||||||||||||||||||    
T  41046872 tatctaaaaagtagattgtctcttgtaaataggaccggagg 41046832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 2959343 - 2959381
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccgga 39  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  2959343 tatctaaaaagtaaattgtttcttgtaaataggaccgga 2959381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 2967812 - 2967850
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccgga 39  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  2967812 tatctaaaaagtaaattgtttcttgtaaataggaccgga 2967850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 6338419 - 6338465
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    ||||||||||||||||||||| ||||||||||||| ||||| |||||    
T  6338419 tatctaaaaagtaaattgtcttttgtaaataggactggagggagtat 6338465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 25027798 - 25027844
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||| || ||||||||||||||||||||||||| |||||    
T  25027798 tatctaaaaagtcaactgtctcttgtaaataggaccggagggagtat 25027844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 29374274 - 29374320
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||| || ||||||||||||||||||||||||| |||||    
T  29374274 tatctaaaaagtcaactgtctcttgtaaataggaccggagggagtat 29374320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 36419089 - 36419135
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    ||||||||||||||||||||||||||||||||| ||| ||| |||||    
T  36419089 tatctaaaaagtaaattgtctcttgtaaataggtccgaagggagtat 36419135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 18353312 - 18353357
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||||||||||| |||||||||||||| |||||| ||||    
T  18353312 tatctaaaaagtaaattgtttcttgtaaataggatcggagggagta 18353357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 50
Target Start/End: Original strand, 21610409 - 21610454
Alignment:
Q  5 taaaaagtaaattgtctcttgtaaataggaccggaggtagtataac 50  Q
    |||||||| |||||| ||||||||||||||||||||| ||||||||    
T  21610409 taaaaagttaattgtttcttgtaaataggaccggagggagtataac 21610454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 37699824 - 37699779
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    |||||||||||| || ||||||||||||||||||||||||| ||||    
T  37699824 tatctaaaaagtcaactgtctcttgtaaataggaccggagggagta 37699779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 2959283 - 2959243
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggagg 41  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  2959283 tatctaaaaagtcaattttctcttgtaaataggaccggagg 2959243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 2967752 - 2967712
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggagg 41  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  2967752 tatctaaaaagtcaattttctcttgtaaataggaccggagg 2967712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 20578763 - 20578807
Alignment:
Q  5 taaaaagtaaattgtctcttgtaaataggaccggaggtagtataa 49  Q
    ||||||||||||||||| ||||||||||||||| ||| |||||||    
T  20578763 taaaaagtaaattgtctattgtaaataggaccgaaggaagtataa 20578807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 21090420 - 21090380
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggagg 41  Q
    |||||||||||| |||| |||||||||||||||||||||||    
T  21090420 tatctaaaaagttaattttctcttgtaaataggaccggagg 21090380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 904010 - 903963
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtata 48  Q
    |||||||||||| || | ||||||||||||||||||||||| ||||||    
T  904010 tatctaaaaagtcaactttctcttgtaaataggaccggagggagtata 903963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 904070 - 904116
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    ||||||||||||||||||| | |||||||||| |||||||| |||||    
T  904070 tatctaaaaagtaaattgtttattgtaaatagaaccggagggagtat 904116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 1643448 - 1643494
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||| || |||||||| |||||||||||||||| |||||    
T  1643448 tatctaaaaagtcaactgtctcttataaataggaccggagggagtat 1643494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 13144984 - 13145030
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||| | || ||||||||||||||||||||||||| |||||    
T  13144984 tatctaaaaaatcaactgtctcttgtaaataggaccggagggagtat 13145030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 35
Target Start/End: Complemental strand, 26898231 - 26898201
Alignment:
Q  5 taaaaagtaaattgtctcttgtaaataggac 35  Q
    |||||||||||||||||||||||||||||||    
T  26898231 taaaaagtaaattgtctcttgtaaataggac 26898201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 26898296 - 26898341
Alignment:
Q  2 atctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    ||||||||||| || | ||||||||||||||||||||||| |||||    
T  26898296 atctaaaaagtcaactttctcttgtaaataggaccggagggagtat 26898341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 31803002 - 31802957
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    |||||||||||| || | ||||||||||||||||||||||| ||||    
T  31803002 tatctaaaaagtcaactttctcttgtaaataggaccggagggagta 31802957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 36417151 - 36417196
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||||||||||| |||| ||||||||||| |||| ||||    
T  36417151 tatctaaaaagtaaattgtttcttataaataggaccagagggagta 36417196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 42311914 - 42311947
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaatagga 34  Q
    |||||||||| |||||||||||||||||||||||    
T  42311914 tatctaaaaaataaattgtctcttgtaaatagga 42311947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 48; Significance: 1e-18; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 36099531 - 36099484
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtata 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  36099531 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtata 36099484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 53621432 - 53621479
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtata 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  53621432 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtata 53621479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 4758881 - 4758927
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  4758881 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 4758927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 18135417 - 18135462
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  18135417 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 18135462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 49122624 - 49122669
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  49122624 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 49122669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 580515 - 580561
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||    
T  580515 tatctaaaaaataaattgtctcttgtaaataggaccggaggtagtat 580561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 23125690 - 23125644
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  23125690 tatctaaaaagtaaattgtctcttgtaaataggaccggagggagtat 23125644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 47948983 - 47948935
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtataa 49  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||    
T  47948983 tatctaaaaagtaaattgtctcttgtaagtaggactggaggtagtataa 47948935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 20688520 - 20688566
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||| || |||||||||||||||||||||||||||||||    
T  20688520 tatctaaaaagtcaactgtctcttgtaaataggaccggaggtagtat 20688566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 38688015 - 38688061
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  38688015 tatctaaaaagtaaattgtttcttgtaaataggaccggagggagtat 38688061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 3085976 - 3086021
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    |||||||||| |||||||||||||||||||||||||||||| ||||    
T  3085976 tatctaaaaaataaattgtctcttgtaaataggaccggagggagta 3086021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 27006549 - 27006504
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||    
T  27006549 tatctaaaaagtaaattgtctcttgtaaataggactggagggagta 27006504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 44200076 - 44200121
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||||||||||||||||||||||| ||||||||| ||||    
T  44200076 tatctaaaaagtaaattgtctcttgtaaataagaccggagggagta 44200121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 39
Target Start/End: Original strand, 5970385 - 5970421
Alignment:
Q  3 tctaaaaagtaaattgtctcttgtaaataggaccgga 39  Q
    |||||||||||||||||||||||||||||||||||||    
T  5970385 tctaaaaagtaaattgtctcttgtaaataggaccgga 5970421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 18430359 - 18430395
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccg 37  Q
    |||||||||||||||||||||||||||||||||||||    
T  18430359 tatctaaaaagtaaattgtctcttgtaaataggaccg 18430395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 31227315 - 31227267
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtataa 49  Q
    ||||||||||||||||||| ||||||||||||||||||| | |||||||    
T  31227315 tatctaaaaagtaaattgtttcttgtaaataggaccggatggagtataa 31227267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 2279568 - 2279533
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggacc 36  Q
    ||||||||||||||||||||||||||||||||||||    
T  2279568 tatctaaaaagtaaattgtctcttgtaaataggacc 2279533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 6246652 - 6246613
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggag 40  Q
    |||||||||||||||||||||||||||||||| |||||||    
T  6246652 tatctaaaaagtaaattgtctcttgtaaatagaaccggag 6246613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 53621372 - 53621325
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtata 48  Q
    |||||||||||| || ||||||||||||||||||||||||| ||||||    
T  53621372 tatctaaaaagtcaactgtctcttgtaaataggaccggagggagtata 53621325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 2385299 - 2385345
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||| ||||||||||||||||||||||||| |||| |||||    
T  2385299 tatctaaaaattaaattgtctcttgtaaataggaccagagggagtat 2385345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 4758821 - 4758775
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||| || ||||||||||||||||||||||||| |||||    
T  4758821 tatctaaaaagtcaactgtctcttgtaaataggaccggagggagtat 4758775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 31854483 - 31854521
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccgga 39  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  31854483 tatctaaaaagtaaattgtttcttgtaaataggaccgga 31854521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 51833056 - 51833018
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccgga 39  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  51833056 tatctaaaaaataaattgtctcttgtaaataggaccgga 51833018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 39834318 - 39834273
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    |||||||||| |||||||||||||||||||| ||||||||| ||||    
T  39834318 tatctaaaaaataaattgtctcttgtaaataagaccggagggagta 39834273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 39877447 - 39877402
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    |||||||||||||||| || ||||||||||||||||||||| ||||    
T  39877447 tatctaaaaagtaaatcgtttcttgtaaataggaccggagggagta 39877402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 19485676 - 19485724
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtataa 49  Q
    |||||||||| | |||| ||||||||||||||||||||||| |||||||    
T  19485676 tatctaaaaaatcaattttctcttgtaaataggaccggagggagtataa 19485724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 36
Target Start/End: Original strand, 7350310 - 7350345
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggacc 36  Q
    ||||||||||||||||||||||||||||||| ||||    
T  7350310 tatctaaaaagtaaattgtctcttgtaaatatgacc 7350345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 56216278 - 56216247
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaatag 32  Q
    ||||||||||||||||||||||||||||||||    
T  56216278 tatctaaaaagtaaattgtctcttgtaaatag 56216247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 580455 - 580409
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||| |||| |||||||||||||||| |||||| |||||    
T  580455 tatctaaaaagtcaattttctcttgtaaataggatcggagggagtat 580409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 2385239 - 2385193
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||| || | ||||||||||||||||||||||| |||||    
T  2385239 tatctaaaaagtcaactttctcttgtaaataggaccggagggagtat 2385193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 2411944 - 2411978
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggac 35  Q
    ||||||||||||||||||| |||||||||||||||    
T  2411944 tatctaaaaagtaaattgtttcttgtaaataggac 2411978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 6246712 - 6246758
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||| || | ||||||||||||||||||||||| |||||    
T  6246712 tatctaaaaagtcaactttctcttgtaaataggaccggagggagtat 6246758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 19485612 - 19485570
Alignment:
Q  5 taaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    ||||||||||||||| ||||||||||||||| ||||| |||||    
T  19485612 taaaaagtaaattgtttcttgtaaataggacaggagggagtat 19485570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 36099591 - 36099637
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||| | || ||||||||||||||||||||||||| |||||    
T  36099591 tatctaaaaaatcaactgtctcttgtaaataggaccggagggagtat 36099637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 53303780 - 53303742
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccgga 39  Q
    |||||||||| ||||||||| ||||||||||||||||||    
T  53303780 tatctaaaaaataaattgtcacttgtaaataggaccgga 53303742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 55292156 - 55292110
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||| || | ||||||||||||||||||||||| |||||    
T  55292156 tatctaaaaagtcaaatttctcttgtaaataggaccggaggaagtat 55292110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 54612018 - 54611978
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggagg 41  Q
    ||||||||||||||||||| |||| ||||||| ||||||||    
T  54612018 tatctaaaaagtaaattgtgtcttataaatagaaccggagg 54611978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 47; Significance: 5e-18; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 22880962 - 22880916
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  22880962 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 22880916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 22898897 - 22898851
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  22898897 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 22898851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 6045785 - 6045831
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  6045785 tatctaaaaagtaaattgtctcttgtaaataggaccggagggagtat 6045831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 24949735 - 24949781
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  24949735 tatctaaaaagtaaattgtctcttgtaaataggaccggagggagtat 24949781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 390909 - 390954
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  390909 tatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 390954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 31971134 - 31971179
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||| ||||||||||||||||||||||||||||||||||||    
T  31971134 tatctaaaatgtaaattgtctcttgtaaataggaccggaggtagta 31971179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 885706 - 885752
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    ||||||||||||||||| |||||||||||||||| ||||||||||||    
T  885706 tatctaaaaagtaaattctctcttgtaaataggatcggaggtagtat 885752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 7405488 - 7405442
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||    
T  7405488 tatctaaaaagtaaattgtctcttgtaaataggaccgaagggagtat 7405442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 14931302 - 14931257
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    |||||||||||||||||||||||| |||||||||||||| ||||||    
T  14931302 tatctaaaaagtaaattgtctcttataaataggaccggaagtagta 14931257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 17225347 - 17225392
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||    
T  17225347 tatctaaaaagtaaattgtctcttgtaaataggatcggagggagta 17225392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 14931357 - 14931405
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtataa 49  Q
    |||||||||||| |||||||||||||||||| ||||||||| |||||||    
T  14931357 tatctaaaaagtcaattgtctcttgtaaatatgaccggagggagtataa 14931405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 885646 - 885599
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtata 48  Q
    |||||||||||| || ||||||||||||||||||||||||| ||||||    
T  885646 tatctaaaaagtcaactgtctcttgtaaataggaccggagggagtata 885599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 30686588 - 30686549
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggag 40  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  30686588 tatctaaaaagtaaattgtctcttgtaaataggactggag 30686549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 6047900 - 6047946
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    ||||||||||||||||| ||||||||||||| ||||||||| |||||    
T  6047900 tatctaaaaagtaaattatctcttgtaaatatgaccggagggagtat 6047946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 24949675 - 24949629
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||| |||| ||||||||||||||||||||||| |||||    
T  24949675 tatctaaaaagtcaattttctcttgtaaataggaccggagggagtat 24949629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 33859534 - 33859488
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    ||||||||||||||||||||| ||||||||||||||| ||| |||||    
T  33859534 tatctaaaaagtaaattgtctattgtaaataggaccgaagggagtat 33859488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 766531 - 766576
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    |||||||||| |||||| ||||||||||||||||||||||| ||||    
T  766531 tatctaaaaaataaattatctcttgtaaataggaccggagggagta 766576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 34639144 - 34639189
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    |||||||||||||||||||||||| |||||||||||| || |||||    
T  34639144 tatctaaaaagtaaattgtctcttataaataggaccgaagatagta 34639189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 6801655 - 6801689
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggac 35  Q
    ||||||||||||||||||| |||||||||||||||    
T  6801655 tatctaaaaagtaaattgtttcttgtaaataggac 6801689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 7405548 - 7405594
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||| |||| ||||||||||||| ||||||||| |||||    
T  7405548 tatctaaaaagtcaattttctcttgtaaataagaccggagggagtat 7405594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 8558958 - 8558912
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||| |||| ||||||||||||||||| ||||| |||||    
T  8558958 tatctaaaaagtcaattttctcttgtaaataggactggagggagtat 8558912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 33859594 - 33859640
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||| || | ||||||||||||||||||||||| |||||    
T  33859594 tatctaaaaagttaactttctcttgtaaataggaccggagggagtat 33859640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 8559017 - 8559062
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    |||||||||| |||||||||||||||||||| || |||||| ||||    
T  8559017 tatctaaaaaataaattgtctcttgtaaataagatcggagggagta 8559062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 34639084 - 34639039
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    |||||||||||| || ||||||||||||||||||| ||||| ||||    
T  34639084 tatctaaaaagtcaactgtctcttgtaaataggactggaggaagta 34639039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 47; Significance: 5e-18; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 8243786 - 8243832
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  8243786 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 8243832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 10049712 - 10049666
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  10049712 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 10049666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 9440232 - 9440277
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  9440232 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 9440277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 26999065 - 26999020
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  26999065 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 26999020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 6087005 - 6087049
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagt 45  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  6087005 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagt 6087049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 14768142 - 14768094
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtataa 49  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  14768142 tatctaaaaagtaaattgtctcttgtaaataggaccggagggagtataa 14768094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 28945700 - 28945654
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  28945700 tatctaaaaagtaaattgtctcttgtaaataggaccggagggagtat 28945654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 9465175 - 9465220
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  9465175 tatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 9465220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 10049772 - 10049820
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtataa 49  Q
    |||||||||||| |||||||||||||||||||||||||||| |||||||    
T  10049772 tatctaaaaagtcaattgtctcttgtaaataggaccggagggagtataa 10049820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 5 - 49
Target Start/End: Original strand, 25846619 - 25846663
Alignment:
Q  5 taaaaagtaaattgtctcttgtaaataggaccggaggtagtataa 49  Q
    ||||||||||||||||||||||||||||||||||| |||||||||    
T  25846619 taaaaagtaaattgtctcttgtaaataggaccggaagtagtataa 25846663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 49122988 - 49122948
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggagg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  49122988 tatctaaaaagtaaattgtctcttgtaaataggaccggagg 49122948  T

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Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 42605931 - 42605977
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||||||||||||||||||| |||||||||||| |||||    
T  42605931 tatctaaaaagtaaattgtctcttgtaagtaggaccggagggagtat 42605977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 29019779 - 29019734
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||||    
T  29019779 tatctaaaatgtaaattgtctcttgtaaataggaccggagggagta 29019734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 47449960 - 47449915
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    |||||||||||||||||||||||||||||||||| |||||| ||||    
T  47449960 tatctaaaaagtaaattgtctcttgtaaataggatcggagggagta 47449915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 25113453 - 25113493
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggagg 41  Q
    |||| ||||||||||||||||||||||||||||||||||||    
T  25113453 tatcgaaaaagtaaattgtctcttgtaaataggaccggagg 25113493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 28945760 - 28945808
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtataa 49  Q
    |||||||||||| |||| ||||||||||||||||||||||| |||||||    
T  28945760 tatctaaaaagtcaattttctcttgtaaataggaccggagggagtataa 28945808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 51698218 - 51698266
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtataa 49  Q
    |||||||||||||||||||||||||||||||||| | |||| |||||||    
T  51698218 tatctaaaaagtaaattgtctcttgtaaataggatcagagggagtataa 51698266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 6086945 - 6086898
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtata 48  Q
    |||||||||||| || ||||||||||||||||||||||||| ||||||    
T  6086945 tatctaaaaagtcaactgtctcttgtaaataggaccggagggagtata 6086898  T

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Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 40215004 - 40215051
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtata 48  Q
    |||||||||||||| ||||||||| |||||||||||||||| ||||||    
T  40215004 tatctaaaaagtaacttgtctcttataaataggaccggagggagtata 40215051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 21653448 - 21653482
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggac 35  Q
    |||||||||||||||||||||||||||||||||||    
T  21653448 tatctaaaaagtaaattgtctcttgtaaataggac 21653482  T

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Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 26999125 - 26999171
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||| || ||||||||||||||||||||||||| |||||    
T  26999125 tatctaaaaagtcaaatgtctcttgtaaataggaccggagggagtat 26999171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 39341416 - 39341370
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||| |||| ||||||||||||||||||||||| |||||    
T  39341416 tatctaaaaagtcaattttctcttgtaaataggaccggagggagtat 39341370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 52114128 - 52114162
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggac 35  Q
    |||||||||||||||||||||||||||||||||||    
T  52114128 tatctaaaaagtaaattgtctcttgtaaataggac 52114162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 379114 - 379069
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    |||||||||| | |||||||||||||||||||||||||||| ||||    
T  379114 tatctaaaaaattaattgtctcttgtaaataggaccggagggagta 379069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 39
Target Start/End: Original strand, 18765363 - 18765400
Alignment:
Q  2 atctaaaaagtaaattgtctcttgtaaataggaccgga 39  Q
    |||||||||||||||||| |||||||||||||||||||    
T  18765363 atctaaaaagtaaattgtttcttgtaaataggaccgga 18765400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 19202354 - 19202399
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||||||||||| | ||||||||||||||||||| ||||    
T  19202354 tatctaaaaagtaaattgttttttgtaaataggaccggagggagta 19202399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 28406510 - 28406465
Alignment:
Q  2 atctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    ||||||||||| |||||| ||||||||||||||||||||| |||||    
T  28406510 atctaaaaagtcaattgtttcttgtaaataggaccggagggagtat 28406465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 28565040 - 28565085
Alignment:
Q  2 atctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    ||||||||| |||||||||||||||||||||||||| ||| |||||    
T  28565040 atctaaaaaataaattgtctcttgtaaataggaccgaagggagtat 28565085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 3484376 - 3484328
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtataa 49  Q
    |||||||||| | |||||||||||||||||||||| ||||| |||||||    
T  3484376 tatctaaaaaattaattgtctcttgtaaataggactggagggagtataa 3484328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 9440172 - 9440132
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggagg 41  Q
    |||||||||||| || |||||||||||||||||||||||||    
T  9440172 tatctaaaaagtcaactgtctcttgtaaataggaccggagg 9440132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 28406574 - 28406618
Alignment:
Q  4 ctaaaaagtaaattgtctcttgtaaataggaccggaggtagtata 48  Q
    ||||||||| |||||| ||||||||||||||||||||| ||||||    
T  28406574 ctaaaaagtcaattgtttcttgtaaataggaccggagggagtata 28406618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 40464566 - 40464517
Alignment:
Q  1 tatctaaaaagtaaattgtctctt----gtaaataggaccggaggtagta 46  Q
    ||||||||||||||||||||||||    ||||||||||||||||||||||    
T  40464566 tatctaaaaagtaaattgtctcttgtaagtaaataggaccggaggtagta 40464517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 42841877 - 42841913
Alignment:
Q  5 taaaaagtaaattgtctcttgtaaataggaccggagg 41  Q
    ||||||||||||||||||||||||||||| |||||||    
T  42841877 taaaaagtaaattgtctcttgtaaatagggccggagg 42841913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 335479 - 335518
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggag 40  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  335479 tatctaaaaagtaaattgttttttgtaaataggaccggag 335518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 23825193 - 23825146
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtata 48  Q
    ||||||||||||||||||| ||||||||||||||  ||||| ||||||    
T  23825193 tatctaaaaagtaaattgtttcttgtaaataggattggagggagtata 23825146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 8243726 - 8243688
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccgga 39  Q
    |||||||||||| |||||||||||||||||| |||||||    
T  8243726 tatctaaaaagtcaattgtctcttgtaaataagaccgga 8243688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 40141978 - 40142012
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggac 35  Q
    ||||||||||||||||||| |||||||||||||||    
T  40141978 tatctaaaaagtaaattgtttcttgtaaataggac 40142012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 51698158 - 51698112
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||| || | ||||||||||||||||||||||| |||||    
T  51698158 tatctaaaaagtcaactttctcttgtaaataggaccggagggagtat 51698112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 40214944 - 40214899
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    |||||||||||| || | ||||||||||||||||||||||| ||||    
T  40214944 tatctaaaaagtcaactttctcttgtaaataggaccggagggagta 40214899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 1122379 - 1122415
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccg 37  Q
    |||||||||||| |||| |||||||||||||||||||    
T  1122379 tatctaaaaagtcaattttctcttgtaaataggaccg 1122415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 19202294 - 19202254
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggagg 41  Q
    |||||||||||| || | |||||||||||||||||||||||    
T  19202294 tatctaaaaagtcaactttctcttgtaaataggaccggagg 19202254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 28564975 - 28564939
Alignment:
Q  5 taaaaagtaaattgtctcttgtaaataggaccggagg 41  Q
    |||||||| |||| |||||||||||||||||||||||    
T  28564975 taaaaagtcaattttctcttgtaaataggaccggagg 28564939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 47; Significance: 5e-18; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 6761509 - 6761463
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  6761509 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 6761463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 16241371 - 16241416
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  16241371 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 16241416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 25892048 - 25892093
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  25892048 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 25892093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 44737386 - 44737431
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  44737386 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 44737431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 39377880 - 39377832
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtataa 49  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||    
T  39377880 tatctaaaaagtaaattgtctcttgtaaataggaccggagggagtataa 39377832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 18452613 - 18452567
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||    
T  18452613 tatctaaaaagtaaattgtctcttgtaaataggactggaggtagtat 18452567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29866126 - 29866080
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  29866126 tatctaaaaagtaaattgtctcttgtaaataggaccggagggagtat 29866080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 13775755 - 13775706
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtataac 50  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  13775755 tatctaaaaagtaaattatctcttgtaaataggaccggagggagtataac 13775706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 20427045 - 20427000
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  20427045 tatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 20427000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 11711428 - 11711474
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    ||||| ||||||||||||||||||||||||||||||||||| |||||    
T  11711428 tatcttaaaagtaaattgtctcttgtaaataggaccggagggagtat 11711474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 39377935 - 39377973
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccgga 39  Q
    |||||||||||||||||||||||||||||||||||||||    
T  39377935 tatctaaaaagtaaattgtctcttgtaaataggaccgga 39377973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 41260069 - 41260024
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||    
T  41260069 tatcaaaaaagtaaattgtctcttgtaaataggaccggagggagta 41260024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 6761569 - 6761616
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtata 48  Q
    |||||||||||| || ||||||||||||||||||||||||| ||||||    
T  6761569 tatctaaaaagtcaactgtctcttgtaaataggaccggagggagtata 6761616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 40430770 - 40430809
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggag 40  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  40430770 tatctaaaaagtaaattgtctcttataaataggaccggag 40430809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 30864779 - 30864825
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    ||||||||||||||||||||||||||||||| ||| ||||| |||||    
T  30864779 tatctaaaaagtaaattgtctcttgtaaataagactggagggagtat 30864825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 42263574 - 42263620
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    ||||||||||||||||||| ||||||||||||||| ||||| |||||    
T  42263574 tatctaaaaagtaaattgtttcttgtaaataggactggagggagtat 42263620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 16241311 - 16241266
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    |||||||||||| || ||||||||||||||||||||||||| ||||    
T  16241311 tatctaaaaagtcaactgtctcttgtaaataggaccggagggagta 16241266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 45065684 - 45065729
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    |||||||||||||||||||||||||||||||| || ||||| ||||    
T  45065684 tatctaaaaagtaaattgtctcttgtaaatagaactggagggagta 45065729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 7765898 - 7765938
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggagg 41  Q
    |||||||||||||||||||||||| ||||||||||| ||||    
T  7765898 tatctaaaaagtaaattgtctcttataaataggaccagagg 7765938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 44736817 - 44736773
Alignment:
Q  6 aaaaagtaaattgtctcttgtaaataggaccggaggtagtataac 50  Q
    |||||||||||||| |||||||||||||| |||||| ||||||||    
T  44736817 aaaaagtaaattgtttcttgtaaataggatcggaggaagtataac 44736773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 3264966 - 3264935
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaatag 32  Q
    ||||||||||||||||||||||||||||||||    
T  3264966 tatctaaaaagtaaattgtctcttgtaaatag 3264935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 9152484 - 9152531
Alignment:
Q  2 atctaaaaagtaaattgtctcttgtaaataggaccggaggtagtataa 49  Q
    ||||||||||| |||||| ||||||||||| ||||||||| |||||||    
T  9152484 atctaaaaagtcaattgtttcttgtaaataagaccggagggagtataa 9152531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 11363102 - 11363133
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaatag 32  Q
    ||||||||||||||||||||||||||||||||    
T  11363102 tatctaaaaagtaaattgtctcttgtaaatag 11363133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 5 - 40
Target Start/End: Complemental strand, 38598496 - 38598461
Alignment:
Q  5 taaaaagtaaattgtctcttgtaaataggaccggag 40  Q
    ||||||||||||||||||||||||||| ||||||||    
T  38598496 taaaaagtaaattgtctcttgtaaataagaccggag 38598461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 44737327 - 44737276
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtataacct 52  Q
    |||||||||||| |||| ||||||||||||| ||||||||| ||||| ||||    
T  44737327 tatctaaaaagtcaattttctcttgtaaataagaccggagggagtattacct 44737276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 7765838 - 7765792
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||| || | ||||||||||||||||||||||| |||||    
T  7765838 tatctaaaaagtcaactttctcttgtaaataggaccggagggagtat 7765792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 30864712 - 30864666
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||| |||| |||||||| |||||||||||||| |||||    
T  30864712 tatctaaaaagtcaattttctcttgtcaataggaccggagggagtat 30864666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 32750386 - 32750340
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||| || | ||||||||||||||||||||||| |||||    
T  32750386 tatctaaaaagtcaactttctcttgtaaataggaccggagggagtat 32750340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 32750446 - 32750492
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||||| | ||||||||||||||||| |||||| |||||    
T  32750446 tatctaaaaagtaactcgtctcttgtaaataggatcggagggagtat 32750492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 43658029 - 43658063
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggac 35  Q
    ||||||||||||||||| |||||||||||||||||    
T  43658029 tatctaaaaagtaaattatctcttgtaaataggac 43658063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 1944638 - 1944683
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    |||||||||||||| |||||||||||||||| ||| ||||| ||||    
T  1944638 tatctaaaaagtaacttgtctcttgtaaatatgactggagggagta 1944683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 4740750 - 4740709
Alignment:
Q  5 taaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    |||||||| |||||| ||||||||||||||||||||| ||||    
T  4740750 taaaaagttaattgtttcttgtaaataggaccggagggagta 4740709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 12486097 - 12486142
Alignment:
Q  2 atctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    ||||||||||| |||||| |||||||||||||||| |||| |||||    
T  12486097 atctaaaaagtcaattgtttcttgtaaataggaccagagggagtat 12486142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 34
Target Start/End: Complemental strand, 32880947 - 32880918
Alignment:
Q  5 taaaaagtaaattgtctcttgtaaatagga 34  Q
    ||||||||||||||||||||||||||||||    
T  32880947 taaaaagtaaattgtctcttgtaaatagga 32880918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 38598560 - 38598605
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||||||| | ||| ||||||||||||||||||| ||||    
T  38598560 tatctaaaaagtaaactttcttttgtaaataggaccggaggaagta 38598605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 2100061 - 2100021
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggagg 41  Q
    |||||||||| |||  |||||||||||||||||||||||||    
T  2100061 tatctaaaaaataacatgtctcttgtaaataggaccggagg 2100021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 25891988 - 25891940
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtataa 49  Q
    |||||||||||| || |||||||| ||||||||| |||||| |||||||    
T  25891988 tatctaaaaagtcaactgtctcttataaataggatcggagggagtataa 25891940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 45571073 - 45571029
Alignment:
Q  2 atctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||| |||| | |||| |||||||||||||||||||||    
T  45571073 atctaaaaagttaattttttcttataaataggaccggaggtagta 45571029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 45574740 - 45574696
Alignment:
Q  2 atctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||| |||| | |||| |||||||||||||||||||||    
T  45574740 atctaaaaagttaattttttcttataaataggaccggaggtagta 45574696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 45578407 - 45578363
Alignment:
Q  2 atctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||| |||| | |||| |||||||||||||||||||||    
T  45578407 atctaaaaagttaattttttcttataaataggaccggaggtagta 45578363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 45582074 - 45582030
Alignment:
Q  2 atctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||| |||| | |||| |||||||||||||||||||||    
T  45582074 atctaaaaagttaattttttcttataaataggaccggaggtagta 45582030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 45585741 - 45585697
Alignment:
Q  2 atctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||| |||| | |||| |||||||||||||||||||||    
T  45585741 atctaaaaagttaattttttcttataaataggaccggaggtagta 45585697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 45589408 - 45589364
Alignment:
Q  2 atctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||| |||| | |||| |||||||||||||||||||||    
T  45589408 atctaaaaagttaattttttcttataaataggaccggaggtagta 45589364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 45593075 - 45593031
Alignment:
Q  2 atctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||| |||| | |||| |||||||||||||||||||||    
T  45593075 atctaaaaagttaattttttcttataaataggaccggaggtagta 45593031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 45596742 - 45596698
Alignment:
Q  2 atctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||| |||| | |||| |||||||||||||||||||||    
T  45596742 atctaaaaagttaattttttcttataaataggaccggaggtagta 45596698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 45600409 - 45600365
Alignment:
Q  2 atctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||| |||| | |||| |||||||||||||||||||||    
T  45600409 atctaaaaagttaattttttcttataaataggaccggaggtagta 45600365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 45604076 - 45604032
Alignment:
Q  2 atctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||| |||| | |||| |||||||||||||||||||||    
T  45604076 atctaaaaagttaattttttcttataaataggaccggaggtagta 45604032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 45607743 - 45607699
Alignment:
Q  2 atctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||| |||| | |||| |||||||||||||||||||||    
T  45607743 atctaaaaagttaattttttcttataaataggaccggaggtagta 45607699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 45611410 - 45611366
Alignment:
Q  2 atctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||| |||| | |||| |||||||||||||||||||||    
T  45611410 atctaaaaagttaattttttcttataaataggaccggaggtagta 45611366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 45615077 - 45615033
Alignment:
Q  2 atctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||| |||| | |||| |||||||||||||||||||||    
T  45615077 atctaaaaagttaattttttcttataaataggaccggaggtagta 45615033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 47; Significance: 5e-18; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 2352353 - 2352307
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  2352353 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 2352307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 14281634 - 14281588
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  14281634 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 14281588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 38830527 - 38830481
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||||||||||||||||||||||||||||||||||||||    
T  38830527 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 38830481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 9302023 - 9302069
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||    
T  9302023 tatctaaaaagtaaattgtctcttataaataggaccggaggtagtat 9302069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 23398124 - 23398078
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||    
T  23398124 tatctaaaaagtaagttgtctcttgtaaataggaccggaggtagtat 23398078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 29312483 - 29312438
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  29312483 tatctaaaaagtaaattgtctcttgtaaataggaccggaggaagta 29312438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 2961208 - 2961254
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||    
T  2961208 tatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 2961254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 9548716 - 9548670
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    ||||||||||||||||||| ||||||||||||||||||||| |||||    
T  9548716 tatctaaaaagtaaattgtttcttgtaaataggaccggaggaagtat 9548670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10380494 - 10380540
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||    
T  10380494 tatctaaaaagtaaattgtctcttgtaaataggaccagagggagtat 10380540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 34718935 - 34718889
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||| |||||||||||||||||||||||||||||| |||||    
T  34718935 tatctaaaaattaaattgtctcttgtaaataggaccggagggagtat 34718889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 24595022 - 24595067
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    |||||||||||||||||||||||||||||||||| | |||||||||    
T  24595022 tatctaaaaagtaaattgtctcttgtaaataggatcagaggtagta 24595067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 2352413 - 2352461
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtataa 49  Q
    |||||||||||| || ||||||||||||||||||||||||| |||||||    
T  2352413 tatctaaaaagtcaactgtctcttgtaaataggaccggagggagtataa 2352461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 2512455 - 2512415
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggagg 41  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  2512455 tatctaaaaagtaaattgtctcttgtaaataggatcggagg 2512415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 45536267 - 45536307
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggagg 41  Q
    ||||||||||||||||| |||||||||||||||||||||||    
T  45536267 tatctaaaaagtaaattatctcttgtaaataggaccggagg 45536307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 9548776 - 9548827
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtataacct 52  Q
    |||||||||||| |||| ||||||||||||||||||||||| ||||| ||||    
T  9548776 tatctaaaaagtcaattttctcttgtaaataggaccggagggagtatgacct 9548827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 46320253 - 46320300
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtata 48  Q
    |||||||||||||||||||||||||||||||||| | |||| ||||||    
T  46320253 tatctaaaaagtaaattgtctcttgtaaataggaacagagggagtata 46320300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 28359175 - 28359213
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccgga 39  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  28359175 tatctaaaaagtaaattgtttcttgtaaataggaccgga 28359213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 9301963 - 9301918
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    |||||||||||| || ||||||||||||||||||||||||| ||||    
T  9301963 tatctaaaaagttaactgtctcttgtaaataggaccggagggagta 9301918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 10380434 - 10380389
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    |||||||||||| |||| ||||||||||||||||||||||| ||||    
T  10380434 tatctaaaaagtcaattttctcttgtaaataggaccggaggaagta 10380389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 23398184 - 23398229
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    |||||||||||| |||||||| ||||||||||||||||||| ||||    
T  23398184 tatctaaaaagtcaattgtctattgtaaataggaccggagggagta 23398229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 28989316 - 28989271
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||||||||||| ||||||||||||||||| ||| ||||    
T  28989316 tatctaaaaagtaaattgtttcttgtaaataggaccgaagggagta 28989271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 26550393 - 26550437
Alignment:
Q  3 tctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||||||||||||| |||||| ||||||||| |||||    
T  26550393 tctaaaaagtaaattgtctcttataaatatgaccggagggagtat 26550437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 33325377 - 33325329
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtataa 49  Q
    |||||||||| |||||||||||||||||||| || |||||| |||||||    
T  33325377 tatctaaaaaataaattgtctcttgtaaatatgatcggagggagtataa 33325329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 10065299 - 10065252
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtata 48  Q
    |||||||||| | |||| ||||||||||||||||||||||| ||||||    
T  10065299 tatctaaaaaatcaattttctcttgtaaataggaccggagggagtata 10065252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 23537425 - 23537464
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggag 40  Q
    |||||||||| ||||||||||||||||||||||| |||||    
T  23537425 tatctaaaaaataaattgtctcttgtaaataggatcggag 23537464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 26733829 - 26733790
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggag 40  Q
    |||||||||||| |||||| ||||||||||||||||||||    
T  26733829 tatctaaaaagttaattgtttcttgtaaataggaccggag 26733790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 49
Target Start/End: Original strand, 39720783 - 39720818
Alignment:
Q  14 aattgtctcttgtaaataggaccggaggtagtataa 49  Q
    ||||||||||| ||||||||||||||||||||||||    
T  39720783 aattgtctcttataaataggaccggaggtagtataa 39720818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 1674076 - 1674122
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||| ||||||||||||||||||||||| | |||| |||||    
T  1674076 tatctaaaaaataaattgtctcttgtaaataggatccgagggagtat 1674122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 2961148 - 2961102
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||| || | ||||||||||||||||||||||| |||||    
T  2961148 tatctaaaaagtcaactttctcttgtaaataggaccggagggagtat 2961102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10065359 - 10065405
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    ||||||||||||||||||| | |||||||||||| |||||| |||||    
T  10065359 tatctaaaaagtaaattgttttttgtaaataggatcggaggaagtat 10065405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 40161277 - 40161307
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaata 31  Q
    |||||||||||||||||||||||||||||||    
T  40161277 tatctaaaaagtaaattgtctcttgtaaata 40161307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 14281694 - 14281743
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaatagga-ccggaggtagtataa 49  Q
    |||||||||||| || |||||||||||||||||| ||||||| |||||||    
T  14281694 tatctaaaaagtcaactgtctcttgtaaataggacccggagggagtataa 14281743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 38830591 - 38830632
Alignment:
Q  5 taaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    |||||||| || ||||||||||||||||||||||||| ||||    
T  38830591 taaaaagtcaactgtctcttgtaaataggaccggagggagta 38830632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 26550331 - 26550283
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtataa 49  Q
    |||||||||||| || | |||||||||||||||| |||||| |||||||    
T  26550331 tatctaaaaagtcaactttctcttgtaaataggatcggaggaagtataa 26550283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 46; Significance: 2e-17; HSPs: 30)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 2229174 - 2229219
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  2229174 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 2229219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 2339334 - 2339287
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtata 48  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||    
T  2339334 tatctaaaaagtaaattgtctcttgtaaataggaccggagggagtata 2339287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 29563702 - 29563657
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  29563702 tatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 29563657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 45145913 - 45145868
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  45145913 tatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 45145868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 12270160 - 12270200
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggagg 41  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  12270160 tatctaaaaagtaaattgtctcttgtaaataggaccggagg 12270200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 30924025 - 30924072
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtata 48  Q
    ||||||||||||||||||||| || |||||||||||||||||||||||    
T  30924025 tatctaaaaagtaaattgtcttttataaataggaccggaggtagtata 30924072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 25848011 - 25847965
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||||||||||||||||||||||||| ||||| ||||||    
T  25848011 tatctaaaaagtaaattgtctcttgtaaataggatcggagctagtat 25847965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 5 - 46
Target Start/End: Original strand, 11293295 - 11293336
Alignment:
Q  5 taaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||||||||||||||||||||||||||||| ||||    
T  11293295 taaaaagtaaattgtctcttgtaaataggaccggaggaagta 11293336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 25848071 - 25848116
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    |||||||||||| || ||||||||||||||||||||||||||||||    
T  25848071 tatctaaaaagtcaactgtctcttgtaaataggaccggaggtagta 25848116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 33642502 - 33642457
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||||||||| ||||||||||||||||||||||| ||||    
T  33642502 tatctaaaaagtaaattatctcttgtaaataggaccggagggagta 33642457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 33837624 - 33837579
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    |||||||||||||||||||||||||||||||| |||||||| ||||    
T  33837624 tatctaaaaagtaaattgtctcttgtaaatagaaccggagggagta 33837579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 22781926 - 22781886
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggagg 41  Q
    ||||||||||||||||||| |||||||||||||||||||||    
T  22781926 tatctaaaaagtaaattgtttcttgtaaataggaccggagg 22781886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 32159138 - 32159178
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggagg 41  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  32159138 tatctaaaaagtaaattgtctcttgtaaataggatcggagg 32159178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 41915698 - 41915746
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtataa 49  Q
    |||||||||||| |||| ||||||||||||||||||||||| |||||||    
T  41915698 tatctaaaaagtcaattttctcttgtaaataggaccggagggagtataa 41915746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 41915638 - 41915591
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtata 48  Q
    |||||||||| ||||||||||||| |||||||||||||||| ||||||    
T  41915638 tatctaaaaattaaattgtctcttataaataggaccggagggagtata 41915591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 2229114 - 2229068
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||| || ||||||||||||||||||||||||| |||||    
T  2229114 tatctaaaaagtcaactgtctcttgtaaataggaccggagggagtat 2229068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 5 - 39
Target Start/End: Original strand, 37564739 - 37564773
Alignment:
Q  5 taaaaagtaaattgtctcttgtaaataggaccgga 39  Q
    |||||||||||||||||||||||||||||||||||    
T  37564739 taaaaagtaaattgtctcttgtaaataggaccgga 37564773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 43135148 - 43135194
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||| || ||||||||||||||||||||||||| |||||    
T  43135148 tatctaaaaagtcaactgtctcttgtaaataggaccggaggaagtat 43135194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 30923965 - 30923920
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    |||||||||||| || ||||||||||||||||||||||||| ||||    
T  30923965 tatctaaaaagtcaactgtctcttgtaaataggaccggaggaagta 30923920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 34028427 - 34028382
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    |||||||||||||||||||  |||||||||||||||||||| ||||    
T  34028427 tatctaaaaagtaaattgttacttgtaaataggaccggagggagta 34028382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 38
Target Start/End: Original strand, 42351302 - 42351339
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccgg 38  Q
    |||||||||| |||||||||||||||||||||||||||    
T  42351302 tatctaaaaaataaattgtctcttgtaaataggaccgg 42351339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 45145969 - 45146014
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    |||||||||||| |||| ||||||||||||||||||||||| ||||    
T  45145969 tatctaaaaagtcaattttctcttgtaaataggaccggagggagta 45146014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 37
Target Start/End: Complemental strand, 27793240 - 27793205
Alignment:
Q  2 atctaaaaagtaaattgtctcttgtaaataggaccg 37  Q
    |||||||||||||||| |||||||||||||||||||    
T  27793240 atctaaaaagtaaattatctcttgtaaataggaccg 27793205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 2339394 - 2339440
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||| || | ||||||||||||||||||||||| |||||    
T  2339394 tatctaaaaagtcaactttctcttgtaaataggaccggagggagtat 2339440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 7668235 - 7668197
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccgga 39  Q
    |||||||||| ||||||||||||||||||||||| ||||    
T  7668235 tatctaaaaaataaattgtctcttgtaaataggatcgga 7668197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 29563762 - 29563808
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||| || | ||||||||||||||||||||||| |||||    
T  29563762 tatctaaaaagtcaactttctcttgtaaataggaccggaggaagtat 29563808  T

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Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 40465282 - 40465236
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||| |||| |||||||||||||||| |||||| |||||    
T  40465282 tatctaaaaagtcaattttctcttgtaaataggatcggagggagtat 40465236  T

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Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 41569200 - 41569238
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccgga 39  Q
    ||||||||||||||||||| |||||||||||||| ||||    
T  41569200 tatctaaaaagtaaattgtttcttgtaaataggatcgga 41569238  T

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Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 27793301 - 27793346
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    |||||||||||| || | ||||||||||||||||||||||| ||||    
T  27793301 tatctaaaaagtcaactttctcttgtaaataggaccggagggagta 27793346  T

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Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 46
Target Start/End: Original strand, 3799826 - 3799866
Alignment:
Q  6 aaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    |||||||||||||||| ||||||||||||||| ||| ||||    
T  3799826 aaaaagtaaattgtctattgtaaataggaccgaagggagta 3799866  T

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Target: chr7 (Bit Score: 46; Significance: 2e-17; HSPs: 20)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 23248772 - 23248817
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  23248772 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 23248817  T

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Target: chr7; HSP #2
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 5909575 - 5909621
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  5909575 tatctaaaaagtaaattgtctcttgtaaataggaccggaggaagtat 5909621  T

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Target: chr7; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 35427763 - 35427808
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  35427763 tatctaaaaagtaaattgtctcttgtaaataggaccggagggagta 35427808  T

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Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 12763273 - 12763227
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||    
T  12763273 tatctaaaaagtaaattgtctcttgtaaataggaccgaagggagtat 12763227  T

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Target: chr7; HSP #5
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 5347832 - 5347871
Alignment:
Q  7 aaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  5347832 aaaagtaaattgtctcttgtaaataggaccggagggagta 5347871  T

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Target: chr7; HSP #6
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 3411376 - 3411338
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccgga 39  Q
    ||||||||||||||||||||||||||||||| |||||||    
T  3411376 tatctaaaaagtaaattgtctcttgtaaataagaccgga 3411338  T

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Target: chr7; HSP #7
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 7107734 - 7107780
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||| || | |||||||||||||||||||||||||||||    
T  7107734 tatctaaaaagtcaactttctcttgtaaataggaccggaggtagtat 7107780  T

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Target: chr7; HSP #8
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 10599420 - 10599466
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||| ||||||||||||||||||||||| |||||| |||||    
T  10599420 tatctaaaaaataaattgtctcttgtaaataggatcggagggagtat 10599466  T

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Target: chr7; HSP #9
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 12426634 - 12426680
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    ||||||||||||||| ||||||||||||||| ||||||||| |||||    
T  12426634 tatctaaaaagtaaactgtctcttgtaaataagaccggaggaagtat 12426680  T

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Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 30866289 - 30866251
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccgga 39  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  30866289 tatctaaaaagtaaattgtctcttttaaataggaccgga 30866251  T

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Target: chr7; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 5 - 46
Target Start/End: Complemental strand, 7463489 - 7463448
Alignment:
Q  5 taaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||||||| ||||||||||||||||||||| ||||    
T  7463489 taaaaagtaaattgtttcttgtaaataggaccggagggagta 7463448  T

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Target: chr7; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 20397859 - 20397814
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    |||||||||| ||||||||||||| |||||||||||||||| ||||    
T  20397859 tatctaaaaattaaattgtctcttataaataggaccggagggagta 20397814  T

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Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 32050184 - 32050223
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggag 40  Q
    ||||||||||||||||||||||||||||||| || |||||    
T  32050184 tatctaaaaagtaaattgtctcttgtaaataagatcggag 32050223  T

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Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 34281773 - 34281820
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtata 48  Q
    ||||||||||||||||||||||||||||||| ||| | ||| ||||||    
T  34281773 tatctaaaaagtaaattgtctcttgtaaataagactgaagggagtata 34281820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 12763333 - 12763379
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||| |||| ||||||||||||| ||||||||| |||||    
T  12763333 tatctaaaaagtcaattttctcttgtaaataagaccggagggagtat 12763379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 20397919 - 20397965
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||| || | ||||||||||||||||||||||| |||||    
T  20397919 tatctaaaaagtcaactttctcttgtaaataggaccggagggagtat 20397965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 9 - 46
Target Start/End: Complemental strand, 15074658 - 15074621
Alignment:
Q  9 aagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  15074658 aagtaaattgtttcttgtaaataggaccggagggagta 15074621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 5347767 - 5347719
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtataa 49  Q
    |||||||||||| || | |||||| |||||||||||||||| |||||||    
T  5347767 tatctaaaaagtcaactttctcttataaataggaccggagggagtataa 5347719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 5909515 - 5909467
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtataa 49  Q
    ||||||||| || |||| ||||||||||||||||||| ||| |||||||    
T  5909515 tatctaaaaggtcaattttctcttgtaaataggaccgaagggagtataa 5909467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 23248712 - 23248664
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtataa 49  Q
    |||||||||||| || | | ||||||||||||||||||||| |||||||    
T  23248712 tatctaaaaagtcaactttatcttgtaaataggaccggagggagtataa 23248664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 35998 - 35952
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||    
T  35998 tatctaaaaagtaaattgtctcttgtaaataggaccggagggagtat 35952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 36059 - 36103
Alignment:
Q  2 atctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||| |||| ||||||||||||||||||||||| ||||    
T  36059 atctaaaaagtcaattttctcttgtaaataggaccggagggagta 36103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0221 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 11074 - 11028
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||    
T  11074 tatctaaaaagtaaattgtctcttgtaaaaaggaccggagggagtat 11028  T

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Target: scaffold0221; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 11134 - 11179
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    |||||||||||| || | ||||||||||||||||||||||| ||||    
T  11134 tatctaaaaagtcaactttctcttgtaaataggaccggagggagta 11179  T

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Target: scaffold0144 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0144
Description:

Target: scaffold0144; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 38869 - 38823
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||||||||||||||||||| ||||||||||| ||||||    
T  38869 tatctaaaaagtaaattgtctcttgtaactaggaccggagatagtat 38823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 38; Significance: 0.000000000001; HSPs: 2)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 29288 - 29243
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagta 46  Q
    ||||||||||||||||||| ||||||||||||||||||||| ||||    
T  29288 tatctaaaaagtaaattgtttcttgtaaataggaccggagggagta 29243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123; HSP #2
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 29348 - 29388
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggagg 41  Q
    |||||||||||| || | |||||||||||||||||||||||    
T  29348 tatctaaaaagtcaactttctcttgtaaataggaccggagg 29388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold2107
Description:

Target: scaffold2107; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 547 - 593
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    |||||||||||| |||| ||||||||||||||||||||||| |||||    
T  547 tatctaaaaagtcaattttctcttgtaaataggaccggagggagtat 593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2107; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 487 - 453
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggac 35  Q
    ||||||||||||||||||| |||||||||||||||    
T  487 tatctaaaaagtaaattgtttcttgtaaataggac 453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 492409 - 492455
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaataggaccggaggtagtat 47  Q
    ||||||||||||||||||| ||||||||||||||| ||||| |||||    
T  492409 tatctaaaaagtaaattgtttcttgtaaataggactggagggagtat 492455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 3744 - 3774
Alignment:
Q  1 tatctaaaaagtaaattgtctcttgtaaata 31  Q
    |||||||||||||||||||||||||||||||    
T  3744 tatctaaaaagtaaattgtctcttgtaaata 3774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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