View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15695_low_11 (Length: 203)

Name: NF15695_low_11
Description: NF15695
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15695_low_11
NF15695_low_11
[»] chr3 (30 HSPs)
chr3 (18-189)||(52473864-52474035)
chr3 (74-189)||(14897981-14898096)
chr3 (74-189)||(24560222-24560337)
chr3 (74-189)||(25655096-25655211)
chr3 (74-189)||(41110445-41110560)
chr3 (106-189)||(46556180-46556263)
chr3 (74-189)||(18654724-18654840)
chr3 (74-189)||(6803325-6803440)
chr3 (106-189)||(27542055-27542138)
chr3 (74-189)||(28582633-28582748)
chr3 (74-189)||(46204891-46205006)
chr3 (75-189)||(220521-220635)
chr3 (75-189)||(21773788-21773902)
chr3 (74-189)||(17474330-17474445)
chr3 (94-185)||(30200219-30200310)
chr3 (120-189)||(10748421-10748490)
chr3 (123-189)||(37102272-37102339)
chr3 (118-189)||(43005863-43005934)
chr3 (107-189)||(651769-651851)
chr3 (75-189)||(10943738-10943852)
chr3 (127-189)||(41040074-41040136)
chr3 (139-189)||(51819249-51819299)
chr3 (105-189)||(52185051-52185136)
chr3 (120-189)||(54574485-54574554)
chr3 (106-189)||(2387884-2387967)
chr3 (74-140)||(17474211-17474277)
chr3 (74-140)||(34641163-34641229)
chr3 (74-151)||(9312636-9312708)
chr3 (120-189)||(40858616-40858685)
chr3 (121-189)||(55327422-55327490)
[»] chr8 (33 HSPs)
chr8 (74-189)||(2248457-2248572)
chr8 (74-189)||(7503078-7503193)
chr8 (74-189)||(31543196-31543311)
chr8 (74-189)||(42650460-42650570)
chr8 (108-189)||(37032418-37032499)
chr8 (74-189)||(1026973-1027087)
chr8 (74-189)||(7979145-7979260)
chr8 (75-186)||(33922531-33922637)
chr8 (74-189)||(40990308-40990422)
chr8 (107-189)||(16652987-16653069)
chr8 (69-189)||(11575530-11575650)
chr8 (74-189)||(9718603-9718718)
chr8 (74-189)||(12022267-12022382)
chr8 (75-189)||(1281149-1281263)
chr8 (74-189)||(29358463-29358580)
chr8 (125-189)||(6315118-6315182)
chr8 (74-189)||(10028115-10028230)
chr8 (106-189)||(11785563-11785646)
chr8 (74-189)||(28083747-28083862)
chr8 (74-140)||(31738596-31738662)
chr8 (120-189)||(41103630-41103699)
chr8 (89-189)||(31738443-31738543)
chr8 (78-169)||(13404985-13405076)
chr8 (74-140)||(43732860-43732926)
chr8 (120-189)||(30664412-30664481)
chr8 (74-138)||(7394636-7394700)
chr8 (74-189)||(16024158-16024274)
chr8 (106-189)||(36308879-36308963)
chr8 (110-169)||(3726999-3727058)
chr8 (74-189)||(30479841-30479956)
chr8 (120-182)||(11033468-11033530)
chr8 (74-138)||(8815316-8815380)
chr8 (74-138)||(30365135-30365199)
[»] chr2 (31 HSPs)
chr2 (74-189)||(36347665-36347780)
chr2 (74-189)||(35736180-35736295)
chr2 (73-189)||(8426995-8427111)
chr2 (74-189)||(15224818-15224933)
chr2 (74-189)||(19566945-19567055)
chr2 (120-189)||(29525857-29525926)
chr2 (118-189)||(31795893-31795964)
chr2 (120-189)||(37740015-37740085)
chr2 (74-189)||(36046328-36046440)
chr2 (74-189)||(36566975-36567091)
chr2 (74-189)||(9426990-9427105)
chr2 (106-189)||(23748132-23748215)
chr2 (74-189)||(39732853-39732967)
chr2 (74-140)||(22356177-22356243)
chr2 (120-189)||(40022421-40022490)
chr2 (74-185)||(12541775-12541882)
chr2 (108-188)||(39354299-39354379)
chr2 (94-189)||(2241435-2241530)
chr2 (106-189)||(2381111-2381194)
chr2 (74-189)||(34187580-34187695)
chr2 (106-189)||(39821706-39821789)
chr2 (74-189)||(41778778-41778893)
chr2 (120-189)||(7681299-7681368)
chr2 (120-188)||(28262568-28262636)
chr2 (142-189)||(16565850-16565897)
chr2 (74-189)||(41841687-41841802)
chr2 (74-140)||(17380014-17380080)
chr2 (74-140)||(36046209-36046275)
chr2 (120-189)||(6721746-6721815)
chr2 (78-189)||(886927-887036)
chr2 (74-138)||(42296478-42296542)
[»] chr6 (30 HSPs)
chr6 (74-186)||(19278165-19278276)
chr6 (74-189)||(9719155-9719269)
chr6 (74-189)||(4097636-4097752)
chr6 (74-189)||(2892727-2892842)
chr6 (74-189)||(2893635-2893750)
chr6 (74-189)||(30487429-30487544)
chr6 (74-189)||(30850036-30850151)
chr6 (75-189)||(16738120-16738233)
chr6 (74-189)||(9721262-9721376)
chr6 (74-185)||(12811108-12811219)
chr6 (74-189)||(31849115-31849230)
chr6 (125-182)||(14548737-14548794)
chr6 (74-154)||(10818234-10818314)
chr6 (74-189)||(14515478-14515591)
chr6 (127-189)||(13583777-13583839)
chr6 (120-169)||(33236002-33236051)
chr6 (126-189)||(1300676-1300740)
chr6 (74-189)||(1390324-1390440)
chr6 (74-189)||(33041475-33041590)
chr6 (129-187)||(5585428-5585486)
chr6 (74-140)||(10818389-10818455)
chr6 (131-189)||(34176397-34176455)
chr6 (120-184)||(6034201-6034265)
chr6 (73-137)||(19278038-19278102)
chr6 (109-189)||(26318345-26318425)
chr6 (74-140)||(9719036-9719102)
chr6 (74-140)||(9721143-9721209)
chr6 (120-189)||(10348922-10348992)
chr6 (74-168)||(15353369-15353463)
chr6 (74-138)||(15323230-15323294)
[»] chr1 (24 HSPs)
chr1 (74-189)||(32951442-32951557)
chr1 (74-189)||(51597673-51597788)
chr1 (74-189)||(30010337-30010452)
chr1 (74-189)||(38510018-38510133)
chr1 (76-189)||(2859056-2859169)
chr1 (74-186)||(12234015-12234127)
chr1 (114-189)||(26940967-26941042)
chr1 (77-189)||(10391880-10391992)
chr1 (106-189)||(8529836-8529919)
chr1 (120-189)||(50744405-50744474)
chr1 (74-189)||(35349586-35349701)
chr1 (120-189)||(40095057-40095127)
chr1 (89-189)||(49832567-49832667)
chr1 (74-189)||(41498409-41498524)
chr1 (142-189)||(49946712-49946759)
chr1 (74-140)||(40094938-40095004)
chr1 (131-185)||(45585813-45585867)
chr1 (125-189)||(42230594-42230658)
chr1 (121-189)||(44211029-44211097)
chr1 (74-140)||(7444483-7444549)
chr1 (74-140)||(12234183-12234249)
chr1 (74-140)||(20576138-20576204)
chr1 (74-140)||(38509899-38509965)
chr1 (77-169)||(50079528-50079620)
[»] chr7 (31 HSPs)
chr7 (74-189)||(33655232-33655347)
chr7 (74-189)||(39855989-39856104)
chr7 (75-184)||(41008188-41008298)
chr7 (74-179)||(13771080-13771185)
chr7 (74-189)||(31571592-31571709)
chr7 (74-189)||(43230241-43230356)
chr7 (120-189)||(24970289-24970358)
chr7 (74-189)||(1051622-1051737)
chr7 (106-189)||(41497081-41497164)
chr7 (74-189)||(47390860-47390975)
chr7 (120-189)||(34235131-34235201)
chr7 (120-189)||(17852922-17852991)
chr7 (74-189)||(25887197-25887312)
chr7 (126-189)||(40196656-40196719)
chr7 (120-189)||(42087046-42087115)
chr7 (74-189)||(37620779-37620894)
chr7 (74-189)||(37925846-37925961)
chr7 (121-188)||(48152036-48152099)
chr7 (74-189)||(34228442-34228558)
chr7 (74-189)||(33519053-33519168)
chr7 (74-140)||(28074108-28074174)
chr7 (119-189)||(42306384-42306454)
chr7 (120-189)||(18063685-18063750)
chr7 (74-189)||(26365772-26365888)
chr7 (142-189)||(4833655-4833702)
chr7 (74-141)||(36267558-36267625)
chr7 (74-137)||(36267729-36267792)
chr7 (74-140)||(42306503-42306569)
chr7 (120-189)||(37417757-37417826)
chr7 (120-189)||(38378096-38378165)
chr7 (75-135)||(40282203-40282263)
[»] chr5 (34 HSPs)
chr5 (74-189)||(7544141-7544256)
chr5 (74-183)||(14681475-14681583)
chr5 (74-189)||(13634716-13634831)
chr5 (74-189)||(16938484-16938599)
chr5 (74-189)||(26414898-26415013)
chr5 (74-189)||(2550476-2550591)
chr5 (74-189)||(4373690-4373805)
chr5 (106-189)||(9856917-9857000)
chr5 (72-189)||(36363035-36363152)
chr5 (120-189)||(9798736-9798805)
chr5 (74-189)||(10476031-10476148)
chr5 (97-169)||(11419305-11419377)
chr5 (74-189)||(28279600-28279716)
chr5 (73-189)||(36392274-36392389)
chr5 (74-189)||(11756883-11756997)
chr5 (71-141)||(36363204-36363274)
chr5 (120-189)||(42681504-42681573)
chr5 (74-169)||(15986768-15986863)
chr5 (74-169)||(20147020-20147109)
chr5 (110-189)||(37606936-37607014)
chr5 (126-189)||(39966076-39966139)
chr5 (131-189)||(8502959-8503017)
chr5 (74-140)||(14245093-14245159)
chr5 (120-182)||(22022901-22022963)
chr5 (120-189)||(10072771-10072840)
chr5 (123-169)||(43430-43477)
chr5 (74-141)||(10650586-10650653)
chr5 (120-167)||(40815348-40815395)
chr5 (74-140)||(1657986-1658052)
chr5 (74-140)||(7544309-7544375)
chr5 (74-140)||(14245219-14245285)
chr5 (74-189)||(16501914-16502031)
chr5 (74-138)||(13634886-13634950)
chr5 (74-138)||(40305840-40305904)
[»] chr4 (32 HSPs)
chr4 (74-189)||(27735750-27735865)
chr4 (74-189)||(31348445-31348560)
chr4 (74-189)||(1968483-1968598)
chr4 (74-189)||(26166942-26167057)
chr4 (74-187)||(54935072-54935186)
chr4 (82-189)||(6891373-6891480)
chr4 (74-189)||(46007825-46007940)
chr4 (74-169)||(51329801-51329896)
chr4 (121-189)||(35248738-35248806)
chr4 (74-189)||(47433832-47433948)
chr4 (74-189)||(37711143-37711263)
chr4 (74-189)||(45741895-45742010)
chr4 (74-189)||(56135754-56135869)
chr4 (74-189)||(5730954-5731070)
chr4 (74-189)||(45132625-45132734)
chr4 (74-189)||(2247927-2248040)
chr4 (75-189)||(17938231-17938346)
chr4 (74-189)||(54320440-54320554)
chr4 (126-189)||(2917087-2917150)
chr4 (74-140)||(49735473-49735539)
chr4 (74-154)||(29798293-29798373)
chr4 (125-189)||(36151632-36151696)
chr4 (89-189)||(49735592-49735691)
chr4 (74-138)||(7977672-7977736)
chr4 (121-189)||(41174397-41174465)
chr4 (78-189)||(16400809-16400920)
chr4 (74-140)||(54320607-54320673)
chr4 (74-140)||(54935242-54935308)
chr4 (120-189)||(28332855-28332924)
chr4 (120-189)||(44784043-44784112)
chr4 (88-136)||(6891537-6891585)
chr4 (74-138)||(37761470-37761534)
[»] scaffold0026 (1 HSPs)
scaffold0026 (74-164)||(1177-1267)
[»] scaffold0096 (1 HSPs)
scaffold0096 (74-189)||(6589-6704)
[»] scaffold0067 (1 HSPs)
scaffold0067 (74-183)||(39320-39429)
[»] scaffold0198 (1 HSPs)
scaffold0198 (74-137)||(3152-3215)
[»] scaffold0171 (1 HSPs)
scaffold0171 (110-187)||(15991-16068)
[»] scaffold0294 (1 HSPs)
scaffold0294 (120-189)||(15314-15383)
[»] scaffold0262 (1 HSPs)
scaffold0262 (105-189)||(16420-16504)
[»] scaffold0119 (1 HSPs)
scaffold0119 (76-168)||(37390-37482)


Alignment Details
Target: chr3 (Bit Score: 152; Significance: 1e-80; HSPs: 30)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 152; E-Value: 1e-80
Query Start/End: Original strand, 18 - 189
Target Start/End: Original strand, 52473864 - 52474035
Alignment:
Q  18 ttttatactaagaagatggtaaaattaaataaatatgtcaagtttatactgtatacgtgtttggattgagagtttgggaggggaagaaaggggagagttc 117  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  52473864 ttttatattaagaagatggtaaaattaaataaatatgtcaagtttatactgtatacgtgtttggattgagagtttgggaggggaagaaatgggagagttc 52473963  T
Q  118 aattttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||||    
T  52473964 aattttcttttttaaattacggattatataacatgttattttaaaataaattacatgtgattgaagtattat 52474035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 14897981 - 14898096
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    ||||||||||||||||||| ||||||||||  || ||| | || | |||||||||||||||||| || ||||| ||||||| || ||||||||||| | |    
T  14897981 gtgtttggattgagagtttaggaggggaagggagaggaaattttacttttcttttttaaattacagactatatgacatgtttttctaaaataaattaagt 14898080  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||||||||    
T  14898081 gtgattgaagtattat 14898096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 24560222 - 24560337
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    ||||||||||| || |||| ||||||||||  ||||||| |||   ||||||||||||||||||||| ||| ||||||||| || ||||||||||| | |    
T  24560222 gtgtttggattaagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacggactatgtaacatgtttttctaaaataaattaaat 24560321  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||||||||    
T  24560322 gtgattgaagtattat 24560337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 25655211 - 25655096
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||   |||| ||||  ||||||| ||| || |||| ||||||||||||||| ||||||||||||| || ||||||||||| | |    
T  25655211 gtgtttggattgagggttgaagaggagaagggaggggagggtttaactttcatttttaaattacggactatataacatgtttttctaaaataaattaagt 25655112  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||||||||    
T  25655111 gtgattgaagtattat 25655096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 41110560 - 41110445
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| ||||| |||||||||  || |||  ||| | ||||| ||||||||||||||| || |||||||||| ||  |||||||||| | |    
T  41110560 gtgtttggattgagggtttgtgaggggaagggagaggaaggtttacttttcgtttttaaattacggactagataacatgtttttcgaaaataaattaagt 41110461  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||||||||    
T  41110460 gtgattgaagtattat 41110445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 106 - 189
Target Start/End: Original strand, 46556180 - 46556263
Alignment:
Q  106 aggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    ||||||||||| |||||||||||||||||||| || ||||||| ||||| ||  |||||||||| | |||||||||||||||||    
T  46556180 aggggagagtttaattttcttttttaaattacagactatataatatgtttttccaaaataaattgagtgtgattgaagtattat 46556263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 18654840 - 18654724
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttctttttt-aaattacggattatataacatgttattttaaaataaatttac 172  Q
    ||||||| |||||| |||| ||||||||||  |||||||||||   ||| ||||||| |||||||||| |||||||||||||  | ||||||||||| |     
T  18654840 gtgtttgaattgagggtttaggaggggaagggaggggagagtttgttttactttttttaaattacggactatataacatgtttctctaaaataaattaag 18654741  T
Q  173 tgtgattgaagtattat 189  Q
    ||| |||||||||||||    
T  18654740 tgtaattgaagtattat 18654724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 6803440 - 6803325
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||  |||| ||||||||||| ||| ||||||| |||||||||||||||||||| || |||  || | ||| || |||||||||||   |    
T  6803440 gtgtttggattgaaggtttaggaggggaagagaggagagagtttaattttcttttttaaattacagactatgcaataagtttttataaaataaattatgt 6803341  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||| ||||||    
T  6803340 gtgattgaactattat 6803325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 106 - 189
Target Start/End: Complemental strand, 27542138 - 27542055
Alignment:
Q  106 aggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    |||||||||||   ||||||||||||||||| | | |||||||||| || || ||||||||||| |||||||||||||||||||    
T  27542138 aggggagagtttgtttttcttttttaaattatgaactatataacatatttttctaaaataaattaactgtgattgaagtattat 27542055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 28582748 - 28582633
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    ||||||||| ||||  ||| ||||||||||  ||||||| ||| | |||||||||||||||||||||  |||||||||||| || ||| ||||||  | |    
T  28582748 gtgtttggactgaggatttaggaggggaagggaggggagggtttacttttcttttttaaattacggacgatataacatgtttttctaagataaatcaagt 28582649  T
Q  174 gtgattgaagtattat 189  Q
    ||| ||||||||||||    
T  28582648 gtggttgaagtattat 28582633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 46204891 - 46205006
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||| ||| |||| | ||| ||||| | | ||| ||| | ||||||||||||||||| | | ||||||||||||| || ||||||||||| | |    
T  46204891 gtgtttggatcgagggtttagcaggagaagagatgagagtgtttacttttcttttttaaattatgaactatataacatgtttttctaaaataaattaagt 46204990  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||||||||    
T  46204991 gtgattgaagtattat 46205006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 189
Target Start/End: Complemental strand, 220635 - 220521
Alignment:
Q  75 tgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttactg 174  Q
    ||||||||| ||| |||| ||||| ||||  |||||||| || | ||||||||||||||||||||| ||| ||||||||| || ||||||||||  | |     
T  220635 tgtttggatggagggtttaggaggagaagggaggggagaatttacttttcttttttaaattacggactatgtaacatgtttttctaaaataaatcaagta 220536  T
Q  175 tgattgaagtattat 189  Q
    |||||||||| ||||    
T  220535 tgattgaagtgttat 220521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 189
Target Start/End: Original strand, 21773788 - 21773902
Alignment:
Q  75 tgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttactg 174  Q
    ||||||||||||  |||| ||||||||||  | || || ||  | ||||||||| ||||||||||| ||||||||||||| || ||||||||||| | ||    
T  21773788 tgtttggattgaaggtttaggaggggaagggaaggaagggtatacttttcttttctaaattacggactatataacatgtttttctaaaataaattaagtg 21773887  T
Q  175 tgattgaagtattat 189  Q
    ||||||||| |||||    
T  21773888 tgattgaagaattat 21773902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 17474445 - 17474330
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||  ||||||||||  ||||||||||| | |||| |||||||||||||| || || ||| || || ||| |||||||||| | |    
T  17474445 gtgtttggattgagggttgaggaggggaagggaggggagagttaacttttattttttaaattacgaataatgtaaaatattttttaaaaataaattaagt 17474346  T
Q  174 gtgattgaagtattat 189  Q
    ||  ||||||||||||    
T  17474345 gtttttgaagtattat 17474330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 94 - 185
Target Start/End: Complemental strand, 30200310 - 30200219
Alignment:
Q  94 ggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagta 185  Q
    ||||||||||  |||| || ||| | ||||||||||||||||||||| ||||||||||||| || ||||||||||  | ||||||| |||||    
T  30200310 ggaggggaagggagggaagggtttacttttcttttttaaattacggactatataacatgtttttctaaaataaatcaagtgtgattaaagta 30200219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 10748490 - 10748421
Alignment:
Q  120 ttttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    |||| |||||||||||||||| ||||||||||||| || ||||||||||| | ||||||  |||||||||    
T  10748490 tttttttttttaaattacggagtatataacatgtttttctaaaataaattaagtgtgataaaagtattat 10748421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 123 - 189
Target Start/End: Complemental strand, 37102339 - 37102272
Alignment:
Q  123 tcttttttaaattacggattatataacatgttattt-taaaataaatttactgtgattgaagtattat 189  Q
    |||||||||||||||||| ||||||||||||| ||| ||||||||||  | |||| ||||||||||||    
T  37102339 tcttttttaaattacggactatataacatgttttttctaaaataaatcaagtgtggttgaagtattat 37102272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 118 - 189
Target Start/End: Complemental strand, 43005934 - 43005863
Alignment:
Q  118 aattttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    |||||||||||||||||| |  | |||||||||| || || ||||||||||||| | |||||||||||||||    
T  43005934 aattttcttttttaaattccaaactatataacatatttttctaaaataaatttaatttgattgaagtattat 43005863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 107 - 189
Target Start/End: Original strand, 651769 - 651851
Alignment:
Q  107 ggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    |||||| ||| | |||||||||||||||||  || ||||||||||||| || ||||||||||| | ||||||| || ||||||    
T  651769 ggggagggtttacttttcttttttaaattatagactatataacatgtttttctaaaataaattaagtgtgattaaaatattat 651851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 75 - 189
Target Start/End: Complemental strand, 10943852 - 10943738
Alignment:
Q  75 tgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttactg 174  Q
    ||||||||||||| ||||  ||||| |||| ||||||| ||||| ||||  ||||||||||||| |  ||  || ||||| |||||||||||||| | ||    
T  10943852 tgtttggattgagggtttatgagggaaagagaggggagggttcacttttaatttttaaattacgaacaatgcaaaatgtttttttaaaataaattaagtg 10943753  T
Q  175 tgattgaagtattat 189  Q
    |  ||||||||||||    
T  10943752 tttttgaagtattat 10943738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 127 - 189
Target Start/End: Complemental strand, 41040136 - 41040074
Alignment:
Q  127 ttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    ||||||||||||||||| |||||||| | |||||||||||| | |  ||||||||||||||||    
T  41040136 ttttaaattacggattagataacatgattttttaaaataaagtaagcgtgattgaagtattat 41040074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 139 - 189
Target Start/End: Complemental strand, 51819299 - 51819249
Alignment:
Q  139 gattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    |||||||||| || || |||||||||||||||| |||||||||||||||||    
T  51819299 gattatataatatatttttttaaaataaatttagtgtgattgaagtattat 51819249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 105 - 189
Target Start/End: Original strand, 52185051 - 52185136
Alignment:
Q  105 aaggggagagttcaattttcttttttaaattacggattatataacatgttattt-taaaataaatttactgtgattgaagtattat 189  Q
    ||||||| |||| | ||||| ||||||||||||  ||||||||||||||| ||| ||||||||||| | | | |||||||||||||    
T  52185051 aaggggatagtttacttttcgtttttaaattacaaattatataacatgttttttctaaaataaattaaatataattgaagtattat 52185136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 54574554 - 54574485
Alignment:
Q  120 ttttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    ||||||||||| |||||| || ||||||||| ||| || ||||||||||| |  ||||||||||||||||    
T  54574554 ttttctttttttaattacagactatataacacgtttttctaaaataaattaagcgtgattgaagtattat 54574485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 106 - 189
Target Start/End: Complemental strand, 2387967 - 2387884
Alignment:
Q  106 aggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    ||||||| ||| | ||||||||| ||||| ||||  ||||||||||||| || ||||||||||| | ||||||| || ||||||    
T  2387967 aggggagggtttacttttcttttctaaatcacggtctatataacatgtttttctaaaataaattaagtgtgattaaattattat 2387884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 17474211 - 17474277
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacgga 140  Q
    |||||||||||||| |||| |||||| ||| || || | |||| | |||||||||||||||||||||    
T  17474211 gtgtttggattgagggtttaggagggaaagtaatggaaaagtttacttttcttttttaaattacgga 17474277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 34641229 - 34641163
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacgga 140  Q
    |||||||||| ||| |||| ||||||||||  ||||||| | | | |||||||||||||||||||||    
T  34641229 gtgtttggatggagggtttaggaggggaagggaggggagggcttacttttcttttttaaattacgga 34641163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 74 - 151
Target Start/End: Complemental strand, 9312708 - 9312636
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacat 151  Q
    |||||||||||||| |||| ||||||||     |||||| |||  ||||||||||||||||||| || ||||||||||    
T  9312708 gtgtttggattgagggtttaggagggga-----ggggagggtttgattttcttttttaaattaccgactatataacat 9312636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 40858616 - 40858685
Alignment:
Q  120 ttttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    |||| |||||||||||||| |  || ||| ||||| |||||||||||||||| |||  ||||||||||||    
T  40858616 ttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaatttagtgtttttgaagtattat 40858685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 55327422 - 55327490
Alignment:
Q  121 tttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    |||||||||||||||||||| || |||||||| | || | ||||||||  | ||||||||||| |||||    
T  55327422 tttcttttttaaattacggactacataacatgcttttcttaaataaatcaaatgtgattgaagcattat 55327490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 68; Significance: 1e-30; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 2248457 - 2248572
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    ||||||||||||||||||| ||||||||||  ||||||||||||||||| |||||||||||||||| |||||||||||||| || ||||||||||  | |    
T  2248457 gtgtttggattgagagtttaggaggggaagggaggggagagttcaatttccttttttaaattacggtttatataacatgtttttctaaaataaatcaagt 2248556  T
Q  174 gtgattgaagtattat 189  Q
    ||||||| | ||||||    
T  2248557 gtgattggaatattat 2248572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 7503193 - 7503078
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    ||||||||||||||  |||||||||||| |  ||||||| ||| | ||||| ||||||||||| ||||||||||||||||| || ||||||||||| | |    
T  7503193 gtgtttggattgaggctttgggaggggaggggaggggagggtttacttttcgtttttaaattatggattatataacatgtttttctaaaataaattaagt 7503094  T
Q  174 gtgattgaagtattat 189  Q
    |||||| |||||||||    
T  7503093 gtgattaaagtattat 7503078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 31543311 - 31543196
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||| ||||||| |||| ||||||||||  ||||||| ||| | ||||||||||||||||| |||  |||||||||||| || ||||||||||| | |    
T  31543311 gtgtttcgattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattatggaccatataacatgtttttctaaaataaattaagt 31543212  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||||||||    
T  31543211 gtgattgaagtattat 31543196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 42650570 - 42650460
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||| ||||||| ||||||||| |||||     |||||||| | ||||| ||||||||||||||| ||||||||||||| || ||||||||||| | |    
T  42650570 gtgtttagattgagggtttgggagaggaag-----ggagagtttacttttcgtttttaaattacggaatatataacatgtttttctaaaataaattaagt 42650476  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||||||||    
T  42650475 gtgattgaagtattat 42650460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 108 - 189
Target Start/End: Original strand, 37032418 - 37032499
Alignment:
Q  108 gggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    ||||||||| | |||||||||||||||||| || ||||||||||||| |||||||||||||| | ||||||| |||||||||    
T  37032418 gggagagtttatttttcttttttaaattacagactatataacatgtttttttaaaataaattaagtgtgattaaagtattat 37032499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 1027087 - 1026973
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    ||||||||||| || |||| ||| ||||||  |||| || ||||| ||||||||||||||||||||| ||||||| ||||| || ||||||||||| | |    
T  1027087 gtgtttggattaagggtttaggaagggaagggagggaagggttcacttttcttttttaaattacggactatataa-atgtttttctaaaataaattaagt 1026989  T
Q  174 gtgattgaagtattat 189  Q
     |||||||||||||||    
T  1026988 atgattgaagtattat 1026973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 7979145 - 7979260
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||| | || |||||  || |||||||| | ||||||||||||||||||||| ||||||||||||| || ||||||||||  | |    
T  7979145 gtgtttggattgagggtttagaagaggaagggagaggagagtttacttttcttttttaaattacggactatataacatgtttttctaaaataaatcaagt 7979244  T
Q  174 gtgattgaagtattat 189  Q
    |  |||||||||||||    
T  7979245 gcaattgaagtattat 7979260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 75 - 186
Target Start/End: Original strand, 33922531 - 33922637
Alignment:
Q  75 tgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttactg 174  Q
    ||||||||||||| |||| ||| ||||||     |||||||| | |||||||||||||||| |||| |||||||||| || |||||||||||||||| |     
T  33922531 tgtttggattgagggtttaggaagggaag-----ggagagtttacttttcttttttaaattccggactatataacatatttttttaaaataaatttagta 33922625  T
Q  175 tgattgaagtat 186  Q
    ||||||||||||    
T  33922626 tgattgaagtat 33922637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 40990422 - 40990308
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| ||| || || |||||  ||| |||||||   ||||||||||||||||||||| |||||||||||||  ||||||||||||| | |    
T  40990422 gtgtttggattgagggttagg-agaggaagggaggagagagtttgtttttcttttttaaattacggactatataacatgtttctttaaaataaattaagt 40990324  T
Q  174 gtgattgaagtattat 189  Q
     |||||||||||||||    
T  40990323 ctgattgaagtattat 40990308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 107 - 189
Target Start/End: Original strand, 16652987 - 16653069
Alignment:
Q  107 ggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    |||||| ||| | ||||||||||||||||||||| ||||||||||||| || ||||||||||  | |||||||||||||||||    
T  16652987 ggggagggtttacttttcttttttaaattacggactatataacatgtttttataaaataaatcaagtgtgattgaagtattat 16653069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 69 - 189
Target Start/End: Complemental strand, 11575650 - 11575530
Alignment:
Q  69 tatacgtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaat 168  Q
    |||| ||||||||||| || |||| ||| | ||||  ||||||| ||| | ||||| ||||||||||||  ||||||||||||||| || ||||||||||    
T  11575650 tatatgtgtttggattcagggtttaggatgagaagggaggggagggtttacttttcatttttaaattacaaattatataacatgtttttctaaaataaat 11575551  T
Q  169 ttactgtgattgaagtattat 189  Q
    | | ||||||| |||||||||    
T  11575550 taagtgtgattaaagtattat 11575530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 9718718 - 9718603
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||| ||||| ||||  |||||| |||| | ||||||||||||||||| | | |||||||||| || || ||||||  ||| | |    
T  9718718 gtgtttggattgagggtttaggaggagaagggaggggaaagtttacttttcttttttaaattatgaactatataacatatttttctaaaattcattaatt 9718619  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||||||||    
T  9718618 gtgattgaagtattat 9718603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 12022382 - 12022267
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||| |||||||||   ||||||| | ||| |||| ||||||||||||||||  || ||| ||||| |||||||||||||| | |    
T  12022382 gtgtttggattgagggtttaggaggggaaaggaggggagggctcacttttattttttaaattacggacaatgtaaaatgtttttttaaaataaattaagt 12022283  T
Q  174 gtgattgaagtattat 189  Q
    ||  ||||||||||||    
T  12022282 gtttttgaagtattat 12022267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 75 - 189
Target Start/End: Original strand, 1281149 - 1281263
Alignment:
Q  75 tgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttactg 174  Q
    ||||||||||||| |||| ||||||||||  | | ||| ||| | |||||||||||||||||||||  |||||||||||| || ||| ||||||  | ||    
T  1281149 tgtttggattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaattacggacgatataacatgtttttctaagataaatcaagtg 1281248  T
Q  175 tgattgaagtattat 189  Q
    || ||||||||||||    
T  1281249 tggttgaagtattat 1281263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 29358580 - 29358463
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaa-gaaaggggagagttcaatttt-cttttttaaattacggattatataacatgttattttaaaataaattta 171  Q
    |||||||||||||||||||  |||||||| | ||| |||| ||| | |||| | |||||||| ||||||||||||||||| || || || |||||||| |    
T  29358580 gtgtttggattgagagtttacgaggggaaaggaagaggagtgtttactttttcatttttaaactacggattatataacatatttttctagaataaattaa 29358481  T
Q  172 ctgtgattgaagtattat 189  Q
     |||||||||||||||||    
T  29358480 gtgtgattgaagtattat 29358463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 125 - 189
Target Start/End: Original strand, 6315118 - 6315182
Alignment:
Q  125 ttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    |||||| ||||||||| ||||||||||||| || ||||||||||| | |||||||||||||||||    
T  6315118 tttttttaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattat 6315182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 10028115 - 10028230
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||| ||| |||| ||||||||    ||| |||| || | |||||||||||||||||||||  ||||||||| || |||||||||||||| | |    
T  10028115 gtgtttggatcgagggtttaggaggggataggaggtgagattttacttttcttttttaaattacggaccatataacatatttttttaaaataaattaagt 10028214  T
Q  174 gtgattgaagtattat 189  Q
    ||| ||||||| ||||    
T  10028215 gtggttgaagtcttat 10028230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 106 - 189
Target Start/End: Original strand, 11785563 - 11785646
Alignment:
Q  106 aggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    ||||||||||| | ||||||||||||||||| | | ||||||||||||| || ||||||| ||| | || ||||||||||||||    
T  11785563 aggggagagtttacttttcttttttaaattatgaactatataacatgtttttctaaaatacattaattgcgattgaagtattat 11785646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 28083747 - 28083862
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    ||||| |||||||| |||| ||||||||||  ||| |||| ||   |||||||||||||||||| ||  ||||||||||||  | ||||||||||| | |    
T  28083747 gtgttcggattgagggtttaggaggggaagggaggagagattttgtttttcttttttaaattacagacaatataacatgtttctctaaaataaattaagt 28083846  T
Q  174 gtgattgaagtattat 189  Q
    ||||||| ||||||||    
T  28083847 gtgattggagtattat 28083862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 31738662 - 31738596
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacgga 140  Q
    |||||||||| ||| |||| ||||||||||||||||||| ||| || |||| |||||||||||||||    
T  31738662 gtgtttggatggagggtttaggaggggaagaaaggggagggtttaaatttcatttttaaattacgga 31738596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 41103699 - 41103630
Alignment:
Q  120 ttttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    ||||||||||||||||||    ||||||||||||| || ||||||||||| | |||||||||||||||||    
T  41103699 ttttcttttttaaattacaagctatataacatgtttttctaaaataaattaagtgtgattgaagtattat 41103630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 189
Target Start/End: Original strand, 31738443 - 31738543
Alignment:
Q  89 gtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtatta 188  Q
    |||| ||||||||||| | |||||||||   |||| ||||||||||||| || |||||||||||||  | || |||||||| | ||| ||||||||||||    
T  31738443 gtttaggaggggaagagaagggagagttttttttttttttttaaattacagactatataacatgtttctctagaataaattaagtgtaattgaagtatta 31738542  T
Q  189 t 189  Q
    |    
T  31738543 t 31738543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 78 - 169
Target Start/End: Original strand, 13404985 - 13405076
Alignment:
Q  78 ttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatt 169  Q
    |||||||||| |||| ||||||||||  | ||||||  | | ||||||||||||||| || || ||||||||||||| || |||||||||||    
T  13404985 ttggattgagggtttaggaggggaagggatgggagaaattacttttcttttttaaataacagactatataacatgtttttctaaaataaatt 13405076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 43732926 - 43732860
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacgga 140  Q
    |||||||||| ||| |||| ||||||||||  ||||||| ||| | |||||||||||||||||||||    
T  43732926 gtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacgga 43732860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 30664412 - 30664481
Alignment:
Q  120 ttttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    |||||||||||||||| | || | ||||||||||| ||  |||||||||| | |||||||||||||||||    
T  30664412 ttttcttttttaaattgcagactttataacatgtttttcaaaaataaattaagtgtgattgaagtattat 30664481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 7394700 - 7394636
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacg 138  Q
    |||||||||||||| |||| ||||||||||  ||||||  ||||| |||| ||||||||||||||    
T  7394700 gtgtttggattgagggtttaggaggggaagggaggggatggttcacttttattttttaaattacg 7394636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 16024158 - 16024274
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatg-ttattttaaaataaatttac 172  Q
    |||||||||||||| |||| ||| ||||||  ||||||||| ||| ||||  ||||||||||||| |  |||||| ||| || |||| ||||||||| |     
T  16024158 gtgtttggattgagggtttaggaagggaagggaggggagagctcagtttttgtttttaaattacgaacaatataaaatgattttttttaaataaattaag 16024257  T
Q  173 tgtgattgaagtattat 189  Q
    |||  ||||||||||||    
T  16024258 tgtttttgaagtattat 16024274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 106 - 189
Target Start/End: Original strand, 36308879 - 36308963
Alignment:
Q  106 aggggagagttcaattttcttttttaaattacggattatataacatgttattt-taaaataaatttactgtgattgaagtattat 189  Q
    ||||||| ||||| |||||||| ||||| ||  || ||||||||||||| ||| ||||||||| | | |||||||||||||||||    
T  36308879 aggggagggttcatttttctttgttaaactagagactatataacatgttttttataaaataaactaagtgtgattgaagtattat 36308963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 110 - 169
Target Start/End: Complemental strand, 3727058 - 3726999
Alignment:
Q  110 gagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatt 169  Q
    ||||||| | |||||||||||| ||||| || ||||||||||||| || |||||||||||    
T  3727058 gagagtttacttttcttttttagattacagactatataacatgtttttctaaaataaatt 3726999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 30479956 - 30479841
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| ||||  ||| ||||   || |||| ||| | |||||||||||||| ||| || |||||  |||||| || ||||||||||  | |    
T  30479956 gtgtttggattgagggtttatgagaggaatggagcggagggtttagttttcttttttaaactacagactatatgtcatgtttttctaaaataaatcaagt 30479857  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||||||||    
T  30479856 gtgattgaagtattat 30479841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 182
Target Start/End: Original strand, 11033468 - 11033530
Alignment:
Q  120 ttttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaa 182  Q
    ||||||||||||||| ||||| |||||| |||||| || |||||||||||   ||||||||||    
T  11033468 ttttcttttttaaataacggactatatatcatgtttttctaaaataaattatgtgtgattgaa 11033530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 8815380 - 8815316
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacg 138  Q
    |||||||||||||| |||| ||||||| ||  ||||||| ||||| ||||  |||||||||||||    
T  8815380 gtgtttggattgagggtttaggagggggagggaggggagggttcacttttaatttttaaattacg 8815316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 30365135 - 30365199
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacg 138  Q
    |||||||||||||| |||| ||||| |||   ||||||||||||| ||||  |||||||||||||    
T  30365135 gtgtttggattgagggtttaggaggagaaaggaggggagagttcacttttaatttttaaattacg 30365199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 1e-30; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 1e-30
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 36347780 - 36347665
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||| ||||||||||  | ||||||||| | ||||||||||||||||||||| ||||||||||||| || ||||||||||| | |    
T  36347780 gtgtttggattgagggtttaggaggggaagggaagggagagtttacttttcttttttaaattacggactatataacatgtttttctaaaataaattaagt 36347681  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||||||||    
T  36347680 gtgattgaagtattat 36347665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 35736180 - 35736295
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||| ||||||||||  ||||||| | | ||||||||||||||||| ||||| || |||||||||| || ||||||||||  | |    
T  35736180 gtgtttggattgagggtttaggaggggaagggaggggaggggttaattttcttttttaaatcacggactagataacatgtttttctaaaataaatgaagt 35736279  T
Q  174 gtgattgaagtattat 189  Q
    |||| |||||||||||    
T  35736280 gtgactgaagtattat 35736295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 8427111 - 8426995
Alignment:
Q  73 cgtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttac 172  Q
    ||||||||||||||| |||| |||||| |||  ||||||||||| | ||||| |||||||| ||| ||  |||||||||||| || ||||||||||| |     
T  8427111 cgtgtttggattgagggtttaggagggaaagggaggggagagtttacttttcatttttaaagtacagacgatataacatgtttttctaaaataaattaag 8427012  T
Q  173 tgtgattgaagtattat 189  Q
    || ||||||||||||||    
T  8427011 tgcgattgaagtattat 8426995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 15224933 - 15224818
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    ||||||||||  || |||| ||||||||||  ||||||  ||| | ||||||||||||||||||||  ||||||||||||| || || |||||||| | |    
T  15224933 gtgtttggatcaagggtttaggaggggaagggaggggatggtttacttttcttttttaaattacgggctatataacatgtttttctagaataaattaagt 15224834  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||||||||    
T  15224833 gtgattgaagtattat 15224818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 19567055 - 19566945
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||| |||| ||     ||||||| ||| |||||  |||||||||||||||| ||||||||||||| || ||||||||||| | |    
T  19567055 gtgtttggattgagggtttaggagagg-----aggggagggtttaatttcattttttaaattacggactatataacatgtttttctaaaataaattaagt 19566961  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||||||||    
T  19566960 gtgattgaagtattat 19566945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 29525926 - 29525857
Alignment:
Q  120 ttttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    ||||||||||||||| ||||| ||||||| ||||| |||||||||||||| | |||||||||||||||||    
T  29525926 ttttcttttttaaatcacggaatatataatatgtttttttaaaataaattaaatgtgattgaagtattat 29525857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 118 - 189
Target Start/End: Complemental strand, 31795964 - 31795893
Alignment:
Q  118 aattttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    ||||||||||| ||||| ||||| || |||||||||| |||||||||||||| | |||||||||||||||||    
T  31795964 aattttcttttctaaatcacggagtaaataacatgtttttttaaaataaattaagtgtgattgaagtattat 31795893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 37740085 - 37740015
Alignment:
Q  120 ttttcttttttaaattacggattatataacatgttattt-taaaataaatttactgtgattgaagtattat 189  Q
    |||||||||||||||| | |||||||||||||||| ||| ||||||||||| | |||||||||||||||||    
T  37740085 ttttcttttttaaattccagattatataacatgttttttctaaaataaattaagtgtgattgaagtattat 37740015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 36046440 - 36046328
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| ||||  |||||||||  ||||||| ||| | |||| ||||||||||||||||  |||||||||| | || ||||||||||| |      
T  36046440 gtgtttggattgagggtttatgaggggaagggaggggag-gtttacttttgttttttaaattacggacgatataacatgcttttataaaataaattga-- 36046344  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||||||||    
T  36046343 gtgattgaagtattat 36046328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 36567091 - 36566975
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaagggga-gagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttac 172  Q
    |||||||||||||| |||| ||||||||| | ||| || || ||   ||||| ||||||||||| | ||||||||||||||| || || |||||||| |     
T  36567091 gtgtttggattgagggtttaggaggggaatagaggagatgatttactttttcgtttttaaattatgaattatataacatgtttttctataataaattaat 36566992  T
Q  173 tgtgattgaagtattat 189  Q
    |||||||||||||||||    
T  36566991 tgtgattgaagtattat 36566975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 9426990 - 9427105
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    ||||||||||||| ||||| ||||||||||  ||| ||| |||  |||||||||||||||||||  | ||||||||||||| ||  ||| ||||||        
T  9426990 gtgtttggattgaaagtttaggaggggaagggaggagagggtttgattttcttttttaaattaccaactatataacatgtttttcaaaactaaattatgc 9427089  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||||||||    
T  9427090 gtgattgaagtattat 9427105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 106 - 189
Target Start/End: Original strand, 23748132 - 23748215
Alignment:
Q  106 aggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    ||||||| ||| | |||||||||||||| |||||| ||||||||||||| ||  |||||||||  | |||||||||||||||||    
T  23748132 aggggagggtttagttttcttttttaaactacggactatataacatgtttttcaaaaataaatcaagtgtgattgaagtattat 23748215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 39732967 - 39732853
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||  ||||| ||||||||| || ||||   || | ||||| ||||||||||||||| |||||| |||||| || ||||||||||| | |    
T  39732967 gtgtttggattgaaggtttgagaggggaaggaaagggatgatttacttttcgtttttaaattacggactatata-catgtttttctaaaataaattaagt 39732869  T
Q  174 gtgattgaagtattat 189  Q
     |||||||||||||||    
T  39732868 atgattgaagtattat 39732853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 22356243 - 22356177
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacgga 140  Q
    ||||||||||||||  ||| ||||||||||  ||||||| ||||| |||||||||||||||||||||    
T  22356243 gtgtttggattgaggatttaggaggggaagggaggggagggttcatttttcttttttaaattacgga 22356177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 40022421 - 40022490
Alignment:
Q  120 ttttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    |||| |||||||||||| | | ||||||||||||| || ||||||||||| | |||||||||||||||||    
T  40022421 tttttttttttaaattatgaactatataacatgtttttgtaaaataaattaagtgtgattgaagtattat 40022490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 185
Target Start/End: Original strand, 12541775 - 12541882
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattt-taaaataaatttac 172  Q
    |||||||||||||| |||| ||||||||     |||||||||  | ||||||||||||||||||||| ||||||| || || ||| ||||||||||| |     
T  12541775 gtgtttggattgagggtttaggagggga-----ggggagagtctacttttcttttttaaattacggactatataaaatattttttctaaaataaattaag 12541869  T
Q  173 tgtgattgaagta 185  Q
    || ||||||||||    
T  12541870 tgcgattgaagta 12541882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 108 - 188
Target Start/End: Complemental strand, 39354379 - 39354299
Alignment:
Q  108 gggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtatta 188  Q
    ||||||||| | |||| |||||||||||||   ||||||||||||||  | ||||||||| ||| ||||||||||||||||    
T  39354379 gggagagtttactttttttttttaaattacaagttatataacatgtttatctaaaataaagttagtgtgattgaagtatta 39354299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 189
Target Start/End: Original strand, 2241435 - 2241530
Alignment:
Q  94 ggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    ||||||||||  ||||||||||| | |||| | || ||||||||||| ||||||| | ||| || ||||||||||| | ||| |||||||||||||    
T  2241435 ggaggggaagggaggggagagtttacttttttattataaattacggactatataatacgtttttctaaaataaattaagtgtaattgaagtattat 2241530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 189
Target Start/End: Complemental strand, 2381194 - 2381111
Alignment:
Q  106 aggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    ||||||||||||| |||| |||||||||||||| |  || ||| ||||| |||||||||||||| | |||  ||||||||||||    
T  2381194 aggggagagttcacttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaattaagtgtttttgaagtattat 2381111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 34187580 - 34187695
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    ||||||||||||||||||| |||| ||||| |||||||  ||||| ||||  ||||||||||||| |  |  ||| ||||| | |||||||||||| | |    
T  34187580 gtgtttggattgagagtttaggagtggaaggaaggggaaggttcacttttaatttttaaattacgaacaacgtaagatgttttattaaaataaattaagt 34187679  T
Q  174 gtgattgaagtattat 189  Q
    ||  ||||||||||||    
T  34187680 gtttttgaagtattat 34187695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 106 - 189
Target Start/End: Original strand, 39821706 - 39821789
Alignment:
Q  106 aggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    ||||||| ||| | ||||| ||||||||||| ||||| ||||||||||| || ||||||||||| | || |||| |||||||||    
T  39821706 aggggagggtttacttttcatttttaaattatggattctataacatgtttttctaaaataaattaagtgcgatttaagtattat 39821789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 41778778 - 41778893
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||| | |||| |||  ||||||| ||| | |||| |  ||||||||| |||   ||||| ||||| |||||||||||||| | |    
T  41778778 gtgtttggattgagggtttagaagggaaagggaggggagggtttacttttgtactttaaattatggacagtataaaatgtttttttaaaataaattaagt 41778877  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||||||||    
T  41778878 gtgattgaagtattat 41778893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 7681299 - 7681368
Alignment:
Q  120 ttttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    ||||| ||||| ||||||||||||||||| |  || || ||||||||||| | |||||||||||||||||    
T  7681299 ttttcattttttaattacggattatataatagttttttgtaaaataaattaagtgtgattgaagtattat 7681368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 188
Target Start/End: Complemental strand, 28262636 - 28262568
Alignment:
Q  120 ttttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtatta 188  Q
    |||||||||||||||||  || ||||||||||||| || |||||||||||   |||||||||| |||||    
T  28262636 ttttcttttttaaattattgactatataacatgtttttctaaaataaattacatgtgattgaaatatta 28262568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 142 - 189
Target Start/End: Original strand, 16565850 - 16565897
Alignment:
Q  142 tatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    ||||||||||||| || ||||||||||| | |||||||||||||||||    
T  16565850 tatataacatgtttttctaaaataaattaagtgtgattgaagtattat 16565897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 41841687 - 41841802
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    ||||||||||||||  ||| |||||| |||  | ||||| |||  |||||||||||||||||||  | |||||||||| || |  ||||||||||| |      
T  41841687 gtgtttggattgaggatttaggagggaaagggatgggagggtttgattttcttttttaaattaccaactatataacatattttcctaaaataaattaagg 41841786  T
Q  174 gtgattgaagtattat 189  Q
    ||||||| ||||||||    
T  41841787 gtgattggagtattat 41841802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 17380080 - 17380014
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacgga 140  Q
    |||||||||||||| |||| ||||||||||  ||||||  |||  |||||| |||||||||||||||    
T  17380080 gtgtttggattgagggtttaggaggggaagtgaggggatggtttgattttcatttttaaattacgga 17380014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 36046209 - 36046275
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacgga 140  Q
    |||||||||| ||| |||| |||||||||   ||||||||||| | ||||| |||||||||||||||    
T  36046209 gtgtttggatggagggtttaggaggggaaatgaggggagagtttatttttcatttttaaattacgga 36046275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 6721815 - 6721746
Alignment:
Q  120 ttttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    ||||||||||||||  ||||| |||||| |||||| || ||||||||||  | |||||||||| ||||||    
T  6721815 ttttcttttttaaaccacggaatatatagcatgtttttctaaaataaatcaagtgtgattgaaatattat 6721746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 78 - 189
Target Start/End: Original strand, 886927 - 887036
Alignment:
Q  78 ttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttactgtga 177  Q
    |||| ||||| |||| ||||||||||  | ||||| | | | ||||||||||||||||||  |  |||||| ||| | ||||||||||||||   |||||    
T  886927 ttgggttgagggtttaggaggggaaggtaagggagggcttacttttcttttttaaattacaca--atataaaatgcttttttaaaataaattatgtgtga 887024  T
Q  178 ttgaagtattat 189  Q
    ||||||||||||    
T  887025 ttgaagtattat 887036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 42296542 - 42296478
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacg 138  Q
    |||||||||||||| | || ||||||||||  ||| ||| ||||| |||| ||||||||||||||    
T  42296542 gtgtttggattgagggattaggaggggaagggaggagagggttcacttttattttttaaattacg 42296478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 65; Significance: 9e-29; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 65; E-Value: 9e-29
Query Start/End: Original strand, 74 - 186
Target Start/End: Complemental strand, 19278276 - 19278165
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    ||||||||||||||||||| ||||||||||  ||||||| ||| | ||||||||||||||||||||| ||||||||||||| || ||||||||||||| |    
T  19278276 gtgtttggattgagagtttaggaggggaagggaggggagggttta-ttttcttttttaaattacggactatataacatgtttttctaaaataaatttagt 19278178  T
Q  174 gtgattgaagtat 186  Q
     ||||||||||||    
T  19278177 ctgattgaagtat 19278165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 9719269 - 9719155
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| ||||  |||||||||| ||||| | ||| |||||||||||||||||| |||| ||||||||||| | ||||||| |||||||| |    
T  9719269 gtgtttggattgagggtttatgaggggaagagaggggtgggtttaattttcttttttaaattccggactatataacatgct-ttttaaattaaatttagt 9719171  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||||||||    
T  9719170 gtgattgaagtattat 9719155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 4097752 - 4097636
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattt-taaaataaatttac 172  Q
    |||||||||||||| ||||  |||||||||  |||| || ||||| |||||||||||||||||||||  ||||||||| || |||  |||||||||| |     
T  4097752 gtgtttggattgagggtttaagaggggaagggagggaagggttcacttttcttttttaaattacggacaatataacattttttttccaaaataaattaag 4097653  T
Q  173 tgtgattgaagtattat 189  Q
    |||||||||||||||||    
T  4097652 tgtgattgaagtattat 4097636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 2892842 - 2892727
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    ||||||| || ||| |||||| ||| ||||  |||||||| || | |||||||||||||| |||||| ||||||||| ||| || ||||||||||||| |    
T  2892842 gtgtttgaatggagggtttggaaggcgaagggaggggagaatttacttttcttttttaaactacggactatataacacgtttttctaaaataaatttagt 2892743  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||| ||||||    
T  2892742 gtgattgaaatattat 2892727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 2893635 - 2893750
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||||||| |||||   || |||||||| | ||||| |||||||| ||| || ||||||||||||| || ||||||||||| | |    
T  2893635 gtgtttggattgagggtttgggaagggaaatgagcggagagtttacttttcgtttttaaactacagactatataacatgtttttctaaaataaattaagt 2893734  T
Q  174 gtgattgaagtattat 189  Q
    |||||||| |||||||    
T  2893735 gtgattgatgtattat 2893750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 30487544 - 30487429
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||| ||||||| |||| ||||||||||  || |||| ||| | |||| ||||||||| |||||| ||||||||||||| || ||||||||||  | |    
T  30487544 gtgtttcgattgagggtttaggaggggaagggagtggagggtttagttttattttttaaactacggactatataacatgtttttataaaataaatcaagt 30487445  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||||||||    
T  30487444 gtgattgaagtattat 30487429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 30850151 - 30850036
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||| |||||| |||| | ||||||||| | |||| | |||||||||| | ||||||||| ||||| |||||||| ||||||| |    
T  30850151 gtgtttggattgagggtttaggagggaaagagaagggagagtttacttttttattttaaattatgaattatataatatgtttttttaaaacaaatttagt 30850052  T
Q  174 gtgattgaagtattat 189  Q
     | |||||||||||||    
T  30850051 ataattgaagtattat 30850036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 75 - 189
Target Start/End: Complemental strand, 16738233 - 16738120
Alignment:
Q  75 tgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttactg 174  Q
    ||||||||||||| |||| ||| |||||| | |||||||||| | |||||||||||||||||| |||||||||| ||||| || ||||||||| | | ||    
T  16738233 tgtttggattgagggtttaggatgggaagga-ggggagagtttacttttcttttttaaattacagattatataaaatgtttttctaaaataaagtaagtg 16738135  T
Q  175 tgattgaagtattat 189  Q
    | ||| |||||||||    
T  16738134 ttatttaagtattat 16738120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 9721376 - 9721262
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    ||||||| |||||| ||||  || || |||| ||||| | ||| |||||||||||||||||| ||||  |||||||||||| ||||||| |||| ||| |    
T  9721376 gtgtttgaattgagggtttatgaaggtaagagaggggtgggtttaattttcttttttaaattccggaccatataacatgtt-ttttaaattaaagttagt 9721278  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||||||||    
T  9721277 gtgattgaagtattat 9721262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 74 - 185
Target Start/End: Complemental strand, 12811219 - 12811108
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||| ||| ||||||| ||||||| | | | ||||||| |||||||||  || ||||||| ||||| || ||||||||||| | |    
T  12811219 gtgtttggattgagggtttaggatgggaagagaggggagggattacttttcttctttaaattagagactatataatatgtttttctaaaataaattaagt 12811120  T
Q  174 gtgattgaagta 185  Q
    ||||||||||||    
T  12811119 gtgattgaagta 12811108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 31849115 - 31849230
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    ||||| |||||||| ||||  |||||||||  ||||||| ||| | |||||||||||||| ||| || |||||||||| || || ||||||||||  | |    
T  31849115 gtgttaggattgagggtttaagaggggaagggaggggagggtttagttttcttttttaaactacagactatataacatatttttctaaaataaatcaagt 31849214  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||||||||    
T  31849215 gtgattgaagtattat 31849230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 125 - 182
Target Start/End: Complemental strand, 14548794 - 14548737
Alignment:
Q  125 ttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaa 182  Q
    ||||||||||||||||  |||||| |||||||||||||||||||| ||||||||||||    
T  14548794 ttttttaaattacggacaatataaaatgttattttaaaataaattaactgtgattgaa 14548737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 10818234 - 10818314
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgtt 154  Q
    |||||||||||||| |||| ||||||||||  ||||||  ||| | |||||||||||||||||||||  ||||||||||||    
T  10818234 gtgtttggattgagggtttaggaggggaagggaggggattgtttatttttcttttttaaattacggacaatataacatgtt 10818314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 14515478 - 14515591
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||| ||||||||||  ||||||| |||   ||||||||||||||||||||| || |||  |||||  | ||||||||||| | |    
T  14515478 gtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaaattacggactagata--atgtttctctaaaataaattaagt 14515575  T
Q  174 gtgattgaagtattat 189  Q
    |||| |||||||||||    
T  14515576 gtgaatgaagtattat 14515591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 127 - 189
Target Start/End: Original strand, 13583777 - 13583839
Alignment:
Q  127 ttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    ||||||||||| |||||||||||||||| || ||||||||||| | |||||||||| ||||||    
T  13583777 ttttaaattacagattatataacatgtttttctaaaataaattaagtgtgattgaaatattat 13583839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 169
Target Start/End: Original strand, 33236002 - 33236051
Alignment:
Q  120 ttttcttttttaaattacggattatataacatgttattttaaaataaatt 169  Q
    ||||||||||||||||||||| ||||||||||||| || |||||||||||    
T  33236002 ttttcttttttaaattacggactatataacatgtttttctaaaataaatt 33236051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 126 - 189
Target Start/End: Original strand, 1300676 - 1300740
Alignment:
Q  126 tttttaaattacggattatataacatgttatttt-aaaataaatttactgtgattgaagtattat 189  Q
    |||||||||||||||||||||||||| || |||| || ||||||| | |||||||||||||||||    
T  1300676 tttttaaattacggattatataacatatttttttcaagataaattaagtgtgattgaagtattat 1300740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 1390324 - 1390440
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatg-ttattttaaaataaatttac 172  Q
    |||||||||| ||| ||||  ||||||||||   | |||| || |||||||||||| |||||||||| ||| ||||||| ||||| ||||||||||| |     
T  1390324 gtgtttggatggagggtttatgaggggaagagcagagagaatttaattttctttttaaaattacggactatgtaacatgtttattctaaaataaattaag 1390423  T
Q  173 tgtgattgaagtattat 189  Q
    | |||||||| ||||||    
T  1390424 tttgattgaaatattat 1390440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 33041475 - 33041590
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||| | |||| |||| ||||   |||||||| || | ||||| |||||||||||  || |||||||  |||| |||||||||||||| | |    
T  33041475 gtgtttggattgggggtttaggagaggaaaggaggggagaatttatttttcatttttaaattatagactatataatgtgtttttttaaaataaattaagt 33041574  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||| ||||    
T  33041575 gtgattgaagtgttat 33041590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 129 - 187
Target Start/End: Complemental strand, 5585486 - 5585428
Alignment:
Q  129 ttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtatt 187  Q
    |||||||||||| ||||||||||||| || ||||||||||| | |||||||||| ||||    
T  5585486 ttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaaatatt 5585428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 10818455 - 10818389
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacgga 140  Q
    ||||||||||||||||||| ||||||| ||  ||||||| ||| | ||||| |||||||||||||||    
T  10818455 gtgtttggattgagagtttaggaggggtagggaggggagggtttacttttcatttttaaattacgga 10818389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 131 - 189
Target Start/End: Original strand, 34176397 - 34176455
Alignment:
Q  131 aaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    |||||||||||||||||||||||| || ||||||||||  | |||||||| ||||||||    
T  34176397 aaattacggattatataacatgtttttctaaaataaatcaagtgtgattgcagtattat 34176455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 184
Target Start/End: Complemental strand, 6034265 - 6034201
Alignment:
Q  120 ttttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagt 184  Q
    |||||||||||||||| | || | ||||||||||| || ||||||||||| | ||||||||||||    
T  6034265 ttttcttttttaaattgcagactgtataacatgtttttctaaaataaattaagtgtgattgaagt 6034201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 73 - 137
Target Start/End: Original strand, 19278038 - 19278102
Alignment:
Q  73 cgtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattac 137  Q
    ||||||||||| ||| |||| |||||||||| |||| ||||||| | ||||| ||||||||||||    
T  19278038 cgtgtttggatggagggtttaggaggggaaggaaggagagagtttacttttcatttttaaattac 19278102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 109 - 189
Target Start/End: Original strand, 26318345 - 26318425
Alignment:
Q  109 ggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    |||| ||||| |||| |||||||||||||| |  |||||| ||||| |||||||||||||| | |||  ||||||||||||    
T  26318345 ggagggttcatttttattttttaaattacgaaaaatataaaatgtttttttaaaataaattaagtgtttttgaagtattat 26318425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 9719036 - 9719102
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacgga 140  Q
    |||||||||||||| |||| ||||||||||  |||||||  || | ||||| |||||||||||||||    
T  9719036 gtgtttggattgagggtttaggaggggaagggaggggaggatttatttttcatttttaaattacgga 9719102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 9721143 - 9721209
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacgga 140  Q
    |||||||||||||  |||| ||||||||||  ||||||| ||| | ||||| |||||||||||||||    
T  9721143 gtgtttggattgaaggtttaggaggggaagggaggggagggtttatttttcatttttaaattacgga 9721209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 10348992 - 10348922
Alignment:
Q  120 ttttcttttttaaattacggattatataacatg-ttattttaaaataaatttactgtgattgaagtattat 189  Q
    |||| |||||||||||||||| ||||||||||| || ||||||||||| |  | || ||||||||||||||    
T  10348992 tttttttttttaaattacggactatataacatgttttttttaaaataattcaagtgcgattgaagtattat 10348922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 168
Target Start/End: Original strand, 15353369 - 15353463
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaat 168  Q
    |||||||||||||| |||| ||||||||||  ||| ||| | ||| |||| |||||||||||||| |  || ||| ||||| |||| ||||||||    
T  15353369 gtgtttggattgagggtttaggaggggaagggaggagagcgctcacttttattttttaaattacgaacaatgtaaaatgtttttttgaaataaat 15353463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 15323230 - 15323294
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacg 138  Q
    |||||||||||||| |||| ||||||||||  ||| ||| | ||| |||| ||||||||||||||    
T  15323230 gtgtttggattgagggtttaggaggggaagggaggagagcgctcacttttattttttaaattacg 15323294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 3e-28; HSPs: 24)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 3e-28
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 32951557 - 32951442
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    ||||||||||||||||||| |||| |||||  ||||||||||| | ||||| ||||||||||||||| |||| |||||||| || ||||||||||| | |    
T  32951557 gtgtttggattgagagtttaggagaggaagggaggggagagtttacttttcgtttttaaattacggactatagaacatgtttttctaaaataaattaagt 32951458  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||||||||    
T  32951457 gtgattgaagtattat 32951442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 51597673 - 51597788
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| ||||  ||  |||||  ||||||||||| | ||||||||||||||| ||||| ||||||||||||| |||||||||||||| | |    
T  51597673 gtgtttggattgagggtttatgaaaggaagggaggggagagtttacttttcttttttaaatcacggactatataacatgtttttttaaaataaattaagt 51597772  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||||||||    
T  51597773 gtgattgaagtattat 51597788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 30010337 - 30010452
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||| ||||||||||  |||||||  || | ||||||| ||||||||||||| ||||||||||||| || ||||||||||| | |    
T  30010337 gtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttgtttaaattacggactatataacatgtttttctaaaataaattaagt 30010436  T
Q  174 gtgattgaagtattat 189  Q
    ||| ||||||||||||    
T  30010437 gtggttgaagtattat 30010452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 38510133 - 38510018
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    ||||||||||| || |||| ||||||||||  ||||||| ||| | |||||||||||||| |||||| ||||||||||||| || ||||||||||  | |    
T  38510133 gtgtttggattaagggtttaggaggggaagggaggggagggtttagttttcttttttaaactacggactatataacatgtttttctaaaataaatcaagt 38510034  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||||||||    
T  38510033 gtgattgaagtattat 38510018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 76 - 189
Target Start/End: Complemental strand, 2859169 - 2859056
Alignment:
Q  76 gtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttactgt 175  Q
    |||||||||||  |||| ||||||||||  ||||||| ||| | |||| |||||||||||||||| ||||||||||||| ||  |||||||||| | |||    
T  2859169 gtttggattgaaggtttaggaggggaagggaggggagggtttacttttattttttaaattacggactatataacatgtttttcaaaaataaattaagtgt 2859070  T
Q  176 gattgaagtattat 189  Q
    ||||||||||||||    
T  2859069 gattgaagtattat 2859056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 74 - 186
Target Start/End: Original strand, 12234015 - 12234127
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||| ||||||||||  |||| || | | ||||||||||||||||||||||| ||||||||||||| || ||||||||||  | |    
T  12234015 gtgtttggattgagggtttaggaggggaagggagggtagggcttaattttcttttttaaattacggactatataacatgtttttctaaaataaatcaagt 12234114  T
Q  174 gtgattgaagtat 186  Q
    |||||||| ||||    
T  12234115 gtgattgatgtat 12234127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 114 - 189
Target Start/End: Complemental strand, 26941042 - 26940967
Alignment:
Q  114 gttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    |||||||||||||||||||| |||||||| ||||||||||| || ||||||||||  | |||||||||||||||||    
T  26941042 gttcaattttcttttttaaaatacggattctataacatgtttttctaaaataaatcaagtgtgattgaagtattat 26940967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 77 - 189
Target Start/End: Original strand, 10391880 - 10391992
Alignment:
Q  77 tttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttactgtg 176  Q
    |||||||||||  ||| |||||||||   ||||||| ||| | ||||| ||||||||||||||| ||||| ||||||| || ||||||||||| | ||||    
T  10391880 tttggattgaggttttaggaggggaaacgaggggagggtttacttttcatttttaaattacggactatattacatgtttttctaaaataaattaattgtg 10391979  T
Q  177 attgaagtattat 189  Q
    ||| |||||||||    
T  10391980 attaaagtattat 10391992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 106 - 189
Target Start/End: Original strand, 8529836 - 8529919
Alignment:
Q  106 aggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    ||||||| ||| | ||||||||||||||||||  | ||||||||||||| |||| ||||||||| | |||||||||||||||||    
T  8529836 aggggagggtttacttttcttttttaaattacaaactatataacatgttttttttaaataaattaagtgtgattgaagtattat 8529919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 50744474 - 50744405
Alignment:
Q  120 ttttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    ||||||||||||||||||||| ||||||||| |||  | ||||||||||| | |||||||||||||||||    
T  50744474 ttttcttttttaaattacggactatataacaggtttctctaaaataaattaagtgtgattgaagtattat 50744405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 35349701 - 35349586
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    ||||||||||| || ||||  |||||||||  ||||||| ||| | ||||| ||||||||||||||| |||||||||| || || ||||||||| | |      
T  35349701 gtgtttggattaagggtttatgaggggaagggaggggagggtttacttttcgtttttaaattacggactatataacatttttttctaaaataaactaagg 35349602  T
Q  174 gtgattgaagtattat 189  Q
    || |||||||||||||    
T  35349601 gttattgaagtattat 35349586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 40095127 - 40095057
Alignment:
Q  120 ttttcttttttaaattacggattatataacatgttattt-taaaataaatttactgtgattgaagtattat 189  Q
    ||||| |||||||||||| || ||||||||||||| ||| ||||||||||| | |||||||||||||||||    
T  40095127 ttttcgtttttaaattacagactatataacatgttttttctaaaataaattaagtgtgattgaagtattat 40095057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 189
Target Start/End: Original strand, 49832567 - 49832667
Alignment:
Q  89 gtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtatta 188  Q
    |||| ||||||||||  || |||||| | | |||||||||||||||||| ||| ||||||  |||| ||| |||||||| | | ||||||||||||||||    
T  49832567 gtttaggaggggaagtgagaggagagcttacttttcttttttaaattacagataatataaagtgttttttaaaaataaaataagtgtgattgaagtatta 49832666  T
Q  189 t 189  Q
    |    
T  49832667 t 49832667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 41498409 - 41498524
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||| ||||||||||  ||||||| ||| | ||||| ||||||||||| | | ||| ||||||| | || ||  |||| || | |    
T  41498409 gtgtttggattgagggtttaggaggggaagtgaggggagggtttacttttcgtttttaaattatgaactatttaacatgattttctacgataagttaagt 41498508  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||||||||    
T  41498509 gtgattgaagtattat 41498524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 49946759 - 49946712
Alignment:
Q  142 tatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    ||||||||||||| |||||||||||||| | |||||||||||||||||    
T  49946759 tatataacatgtttttttaaaataaattaaatgtgattgaagtattat 49946712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 40094938 - 40095004
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacgga 140  Q
    |||||||||| ||| |||| |||||||||| |||||||| ||| | ||||| |||||||||||||||    
T  40094938 gtgtttggatggagggtttaggaggggaaggaaggggagggtttacttttcatttttaaattacgga 40095004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 131 - 185
Target Start/End: Complemental strand, 45585867 - 45585813
Alignment:
Q  131 aaattacggattatataacatgttattttaaaataaatttactgtgattgaagta 185  Q
    |||||||||| ||||||||||||| |||||||||||||| | |||||| ||||||    
T  45585867 aaattacggactatataacatgtttttttaaaataaattaagtgtgatcgaagta 45585813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 125 - 189
Target Start/End: Original strand, 42230594 - 42230658
Alignment:
Q  125 ttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    ||||| ||||||  |||||| ||||||||| ||| |||||||||| | |||||||||||||||||    
T  42230594 tttttaaaattattgattatttaacatgttttttaaaaataaattaagtgtgattgaagtattat 42230658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 189
Target Start/End: Complemental strand, 44211097 - 44211029
Alignment:
Q  121 tttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    |||||||| |||||||| |  |||||||| |||| || ||||||||||| | |||||||||||||||||    
T  44211097 tttcttttataaattacagtctatataacgtgtttttctaaaataaattaagtgtgattgaagtattat 44211029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 7444483 - 7444549
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacgga 140  Q
    ||||| |||||||| |||||||||| ||||  | ||||| ||| | |||||||||||||||||||||    
T  7444483 gtgttaggattgagggtttgggaggagaagggaagggagggtttacttttcttttttaaattacgga 7444549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 12234249 - 12234183
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacgga 140  Q
    |||||||||| ||| |||| ||||||||||  ||||||| ||| | ||||| |||||||||||||||    
T  12234249 gtgtttggatggagggtttaggaggggaagggaggggagggtttagttttcatttttaaattacgga 12234183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 20576138 - 20576204
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacgga 140  Q
    |||||||||| ||| |||| ||||||||||  ||||||||||| |  |||| |||||||||||||||    
T  20576138 gtgtttggatagagggtttaggaggggaagggaggggagagtttagatttcatttttaaattacgga 20576204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 38509899 - 38509965
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacgga 140  Q
    |||||||||| ||| |||| ||||||||||  || |||| ||||| ||||| |||||||||||||||    
T  38509899 gtgtttggatagagggtttaggaggggaagggagaggagggttcacttttcatttttaaattacgga 38509965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 77 - 169
Target Start/End: Complemental strand, 50079620 - 50079528
Alignment:
Q  77 tttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatt 169  Q
    ||||||||||| |||| ||||| ||| | ||| ||||||||  |||| || |||||| |||| |  |||||| ||||| ||||||||||||||    
T  50079620 tttggattgagtgtttaggaggagaaaagaggagagagttcctttttattatttaaagtacgaacaatataaaatgtttttttaaaataaatt 50079528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 60; Significance: 8e-26; HSPs: 31)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 33655347 - 33655232
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||| ||||||||||| ||| ||| ||| | ||||||||||||||||| ||  ||||||||||||| || ||||||||||| | |    
T  33655347 gtgtttggattgagggtttaggaggggaagagaggcgagggtttacttttcttttttaaattatgggctatataacatgtttttctaaaataaattaagt 33655248  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||||||||    
T  33655247 gtgattgaagtattat 33655232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 39856104 - 39855989
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||| ||||||||||  ||||||| ||| | ||||||||||||||||||||| ||||||||||||| || ||||||||||| | |    
T  39856104 gtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattacggactatataacatgtttttctaaaataaattaagt 39856005  T
Q  174 gtgattgaagtattat 189  Q
    |||| | |||||||||    
T  39856004 gtgacttaagtattat 39855989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 75 - 184
Target Start/End: Original strand, 41008188 - 41008298
Alignment:
Q  75 tgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatg-ttattttaaaataaatttact 173  Q
    ||||||||||||| ||||| |||||||||  |||||||| ||   ||||||||||||||||||||| ||||||||||| || |||||||||||||| | |    
T  41008188 tgtttggattgagggtttgagaggggaagggaggggagaatttgtttttcttttttaaattacggactatataacatgttttttttaaaataaattaagt 41008287  T
Q  174 gtgattgaagt 184  Q
    |||||||||||    
T  41008288 gtgattgaagt 41008298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 74 - 179
Target Start/End: Complemental strand, 13771185 - 13771080
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||| ||||||| |||| ||||||||||  ||| ||||||| | ||||| ||||||||||||||| ||||||||||||| |||||||||||||| | |    
T  13771185 gtgtttagattgagggtttaggaggggaagggaggtgagagtttacttttcgtttttaaattacggactatataacatgtttttttaaaataaattaagt 13771086  T
Q  174 gtgatt 179  Q
    ||||||    
T  13771085 gtgatt 13771080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 31571709 - 31571592
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatg-ttattttaaaataa-attta 171  Q
    |||||||||||||| |||| ||||||||||  ||||||||||| | |||||||||||||||||||||  |||||||||| || |||||||| || ||| |    
T  31571709 gtgtttggattgagggtttaggaggggaagcgaggggagagtttacttttcttttttaaattacggaccatataacatgctttttttaaaaaaatattaa 31571610  T
Q  172 ctgtgattgaagtattat 189  Q
     |||||||||||||||||    
T  31571609 gtgtgattgaagtattat 31571592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 43230241 - 43230356
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||| | ||||  ||| | ||| |||||||| ||| | ||||||||||||||||||||||||||||||||||| || ||||||||||| | |    
T  43230241 gtgtttggattgggggtttaagagagaaaggaaggggagggtttacttttcttttttaaattacggattatataacatgtttttctaaaataaattaagt 43230340  T
Q  174 gtgattgaagtattat 189  Q
    | |||||||| |||||    
T  43230341 gcgattgaagaattat 43230356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 24970358 - 24970289
Alignment:
Q  120 ttttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    ||||||||||||||||| ||||||||||||||||| || ||||||||||| | |||||||||||||||||    
T  24970358 ttttcttttttaaattatggattatataacatgtttttctaaaataaattaagtgtgattgaagtattat 24970289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 1051737 - 1051622
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||| ||||||||||  ||| |||  || | ||||||||||||||||||| | |||||||| |||| || ||||||||||| | |    
T  1051737 gtgtttggattgagggtttaggaggggaagggaggagaggatttatttttcttttttaaattacgaactatataacctgtttttctaaaataaattaagt 1051638  T
Q  174 gtgattgaagtattat 189  Q
    |||||||||| |||||    
T  1051637 gtgattgaagcattat 1051622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 106 - 189
Target Start/End: Complemental strand, 41497164 - 41497081
Alignment:
Q  106 aggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    ||||||| ||| | ||||||||||||||||||||| ||||||||||||| || ||||||||||| | ||||||||||| |||||    
T  41497164 aggggagggtttacttttcttttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagaattat 41497081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 47390860 - 47390975
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| | || ||||||||||  || |||| ||| | ||||||||||||||||| | | ||||||||||||| || ||||||| ||| | |    
T  47390860 gtgtttggattgaggggttaggaggggaagggagtggagggtttacttttcttttttaaattatgaactatataacatgtttttctaaaatacattaatt 47390959  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||||||||    
T  47390960 gtgattgaagtattat 47390975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 34235201 - 34235131
Alignment:
Q  120 ttttcttttttaaattacggattatataacatgttattt-taaaataaatttactgtgattgaagtattat 189  Q
    ||||| ||||||||||||||||||||||||||||| ||| ||||||||||| | |||||||||||||||||    
T  34235201 ttttcatttttaaattacggattatataacatgttttttctaaaataaattaagtgtgattgaagtattat 34235131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 17852922 - 17852991
Alignment:
Q  120 ttttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    |||||||||||||||||||||||| |||||||||| || ||||||||||| | ||||||||| |||||||    
T  17852922 ttttcttttttaaattacggattaaataacatgtttttctaaaataaattaagtgtgattgaggtattat 17852991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 25887197 - 25887312
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| ||||  |||||||||  |||||||  ||   ||||||||| ||||| ||||| ||||||||||||| || ||||||||||| | |    
T  25887197 gtgtttggattgagggtttatgaggggaagggaggggaggatttgtttttcttttataaatcacggactatataacatgtttttctaaaataaattaagt 25887296  T
Q  174 gtgattgaagtattat 189  Q
    ||||||| ||||||||    
T  25887297 gtgattggagtattat 25887312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 126 - 189
Target Start/End: Complemental strand, 40196719 - 40196656
Alignment:
Q  126 tttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    ||||||||||||||| ||||||||||||| || ||||||||||| | |||||||||||||||||    
T  40196719 tttttaaattacggaatatataacatgtttttctaaaataaattaagtgtgattgaagtattat 40196656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 42087046 - 42087115
Alignment:
Q  120 ttttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    |||||||||| |||||||| |||||||||||| ||||||||||||||||| | ||| |||||| ||||||    
T  42087046 ttttctttttaaaattacgaattatataacatattattttaaaataaattaagtgtaattgaattattat 42087115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 37620779 - 37620894
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||||||||||||||  ||||||||||||| ||||  |||| |||||| | |  || ||| ||| | |||||||||||||| | |    
T  37620779 gtgtttggattgagggtttgggaggggaagggaggggagagttcactttttattttcaaattatgaacaatgtaaaatgattttttaaaataaattaaat 37620878  T
Q  174 gtgattgaagtattat 189  Q
    ||  ||||||||||||    
T  37620879 gtttttgaagtattat 37620894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 37925846 - 37925961
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||| ||||||||||  ||||||| ||||| |||| |||||||||||||| |  || ||| ||||| |||| ||||| ||| | |    
T  37925846 gtgtttggattgagggtttaggaggggaagggaggggagggttcacttttattttttaaattacgaacaatgtaaaatgttttttttaaatagattaagt 37925945  T
Q  174 gtgattgaagtattat 189  Q
    ||  ||||||||||||    
T  37925946 gtttttgaagtattat 37925961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 121 - 188
Target Start/End: Original strand, 48152036 - 48152099
Alignment:
Q  121 tttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtatta 188  Q
    |||||||||||||||||||    ||||||||||| || ||||||||||||| ||||||||||||||||    
T  48152036 tttcttttttaaattacgg----tataacatgtttttctaaaataaatttagtgtgattgaagtatta 48152099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 34228558 - 34228442
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggat-tatataacatgttattttaaaataaatttac 172  Q
    ||||||| |||||  |||| ||||| ||||  |||||||  || | ||||| |||| ||||||||||  ||||||||||||| || ||||||||||| |     
T  34228558 gtgtttgaattgaaggtttaggaggagaagggaggggaggatttacttttcattttaaaattacggaactatataacatgtttttctaaaataaattaag 34228459  T
Q  173 tgtgattgaagtattat 189  Q
    |||||||||||||||||    
T  34228458 tgtgattgaagtattat 34228442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 33519053 - 33519168
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||| |||  ||| ||||||||||  ||||||| | ||| |||| |||||||||||||| |  |||||| ||||| |||| ||||||||| | |    
T  33519053 gtgtttggatggaggttttaggaggggaagggaggggagggctcacttttattttttaaattacgaacaatataaaatgtttttttgaaataaattaagt 33519152  T
Q  174 gtgattgaagtattat 189  Q
    ||  ||||||||||||    
T  33519153 gtttttgaagtattat 33519168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 28074108 - 28074174
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacgga 140  Q
    |||||||||||||  |||| ||||||||||  ||||||||  ||| |||||||||||||||||||||    
T  28074108 gtgtttggattgaaggtttaggaggggaagggaggggagaactcacttttcttttttaaattacgga 28074174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 119 - 189
Target Start/End: Original strand, 42306384 - 42306454
Alignment:
Q  119 attttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    ||||||||||||||||||| || ||||||||||||  || ||||||||||| |  ||||||| ||||||||    
T  42306384 attttcttttttaaattaccgactatataacatgtatttctaaaataaattaagcgtgattggagtattat 42306454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 18063750 - 18063685
Alignment:
Q  120 ttttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    ||||||||||||||||| |||| ||||||    || |||||||||||||| | |||||||||||||||||    
T  18063750 ttttcttttttaaattatggataatataa----tttttttaaaataaattaagtgtgattgaagtattat 18063685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 26365772 - 26365888
Alignment:
Q  74 gtgtttggattgagagtttgggagggg-aagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttac 172  Q
    |||||||||||||| |||| ||||||| |||  ||  ||||||| | |||||||||||| |||||  | |||||||||| || || ||||||||| |       
T  26365772 gtgtttggattgagggtttaggagggggaagggagttgagagtttacttttcttttttatattacaaactatataacatatttttctaaaataaactagg 26365871  T
Q  173 tgtgattgaagtattat 189  Q
    |||||||||||||||||    
T  26365872 tgtgattgaagtattat 26365888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 142 - 189
Target Start/End: Complemental strand, 4833702 - 4833655
Alignment:
Q  142 tatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    |||||||||||| ||||||||||||||| | ||||||| |||||||||    
T  4833702 tatataacatgtaattttaaaataaattaaatgtgatttaagtattat 4833655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 74 - 141
Target Start/End: Original strand, 36267558 - 36267625
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggat 141  Q
    |||||||||| ||| |||| ||||||||||  ||||||| | | | ||||||||||||||||||||||    
T  36267558 gtgtttggatggagggtttaggaggggaagggaggggagggcttagttttcttttttaaattacggat 36267625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 74 - 137
Target Start/End: Complemental strand, 36267792 - 36267729
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattac 137  Q
    |||||||||||||| |||| ||||||||||  ||||||| | ||| |||| |||||||||||||    
T  36267792 gtgtttggattgagggtttaggaggggaagggaggggagggctcatttttattttttaaattac 36267729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 42306569 - 42306503
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacgga 140  Q
    |||||||||||||| |||| |||||||||   ||||||  ||| ||||||| |||||||||||||||    
T  42306569 gtgtttggattgagggtttaggaggggaattgaggggatggtttaattttcatttttaaattacgga 42306503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 37417826 - 37417757
Alignment:
Q  120 ttttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    ||||| ||||||||| ||||| ||||||||||||| ||  ||| ||| || | |||||||||||||||||    
T  37417826 ttttcatttttaaataacggactatataacatgtttttcaaaattaagttaagtgtgattgaagtattat 37417757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 38378096 - 38378165
Alignment:
Q  120 ttttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    |||||||||||||| |||| | ||||||||||||| ||| |||||||||  | ||| ||||| |||||||    
T  38378096 ttttcttttttaaactacgaactatataacatgttttttaaaaataaatcaattgtaattgaggtattat 38378165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 75 - 135
Target Start/End: Original strand, 40282203 - 40282263
Alignment:
Q  75 tgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaatt 135  Q
    ||||||||||||| |||| ||||||||||  || |||| |||  |||||||||||||||||    
T  40282203 tgtttggattgagggtttaggaggggaagggagaggagggtttgattttcttttttaaatt 40282263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 60; Significance: 8e-26; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 7544141 - 7544256
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||| ||| ||||||  ||||||| | | ||||||||||||||||||||||| ||||||||||||| || ||||||||||  | |    
T  7544141 gtgtttggattgagggtttaggaagggaagggaggggagggctaaattttcttttttaaattacggactatataacatgtttttctaaaataaatcaagt 7544240  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||||||||    
T  7544241 gtgattgaagtattat 7544256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 74 - 183
Target Start/End: Original strand, 14681475 - 14681583
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||| |||||||||| ||| |  | ||| |||||||||||||||||||| |||||||||||||||| |||||||||||||| | |    
T  14681475 gtgtttggattgagggtttaggaggggaaggaagtgatg-gttaaattttcttttttaaattacagattatataacatgtttttttaaaataaattaaat 14681573  T
Q  174 gtgattgaag 183  Q
    ||||||||||    
T  14681574 gtgattgaag 14681583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 13634716 - 13634831
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||| ||||||||||  ||||||| ||| | ||||||||||||||| ||||| ||||||||||||| || |||||||||||   |    
T  13634716 gtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaataacggactatataacatgtttttctaaaataaattatgt 13634815  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||| ||||||    
T  13634816 gtgattgaattattat 13634831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 16938484 - 16938599
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||| ||||||||||  ||||||| |||   ||||||||||||| ||||||| |||||||||||||  | ||||||||||| | |    
T  16938484 gtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcttttttaagttacggactatataacatgtttctctaaaataaattaagt 16938583  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||| ||||||    
T  16938584 gtgattgaaatattat 16938599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 26414898 - 26415013
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||| ||||| ||||  ||||||| ||| | ||||| ||||||||||||||| ||||| ||||||| || ||||||| ||| | |    
T  26414898 gtgtttggattgagggtttaggaggagaagggaggggagggtttacttttcgtttttaaattacggactatatgacatgtttttctaaaatatattaagt 26414997  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||||||||    
T  26414998 gtgattgaagtattat 26415013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 2550591 - 2550476
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||| ||||||||||  ||||||| ||| | |||||||||||||  | |||| ||||||||||||| || || ||||||||   |    
T  2550591 gtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaagattcggactatataacatgtttttctataataaattacgt 2550492  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||||||||    
T  2550491 gtgattgaagtattat 2550476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 4373805 - 4373690
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||| ||| ||||| | || ||||  || | ||||||||||||||||||||| ||||||||| ||| ||| |||||||||| | |    
T  4373805 gtgtttggattgagggtttaggaagggaaaatagtggaggatttacttttcttttttaaattacggactatataacaagttttttaaaaataaattaagt 4373706  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||| ||||||    
T  4373705 gtgattgaaatattat 4373690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 106 - 189
Target Start/End: Original strand, 9856917 - 9857000
Alignment:
Q  106 aggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    ||||||||||| | ||||||||||||||||| ||| ||||||||||||| || ||||||||||  | |||||||||||||||||    
T  9856917 aggggagagtttagttttcttttttaaattaaggactatataacatgtttttctaaaataaatcaagtgtgattgaagtattat 9857000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 72 - 189
Target Start/End: Original strand, 36363035 - 36363152
Alignment:
Q  72 acgtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaattta 171  Q
    |||||||||||||||| |||| | |||||||   ||||||||||| ||||||||| |||||| |||| | ||||||||||||| || ||||||||||  |    
T  36363035 acgtgtttggattgagggtttagaaggggaatggaggggagagtttaattttcttgtttaaactacgtactatataacatgtttttctaaaataaatcaa 36363134  T
Q  172 ctgtgattgaagtattat 189  Q
     ||| |||||||| ||||    
T  36363135 gtgtcattgaagttttat 36363152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 9798805 - 9798736
Alignment:
Q  120 ttttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    |||||||||| ||||||| |||||||||||||||| || | ||||||||| | |||||||||||||||||    
T  9798805 ttttctttttaaaattacagattatataacatgtttttcttaaataaattaattgtgattgaagtattat 9798736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 10476031 - 10476148
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaa-ttacggattatata-acatgttattttaaaataaattta 171  Q
    ||||||| |||||| |||| ||||||||||  | | ||| ||| | |||||||||||||| |||| ||||||||| ||||||| || ||||||||||| |    
T  10476031 gtgtttgaattgagggtttaggaggggaagggatgagagggtttacttttcttttttaaaattacagattatatatacatgtttttctaaaataaattaa 10476130  T
Q  172 ctgtgattgaagtattat 189  Q
     |||||||||||||||||    
T  10476131 gtgtgattgaagtattat 10476148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 97 - 169
Target Start/End: Complemental strand, 11419377 - 11419305
Alignment:
Q  97 ggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatt 169  Q
    ||||||| || | ||||||| | |||||||||||||||||||| |||||||||||||| || |||||||||||    
T  11419377 ggggaaggaatgagagagtttacttttcttttttaaattacgggttatataacatgtttttctaaaataaatt 11419305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 28279716 - 28279600
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattt-taaaataaatttac 172  Q
    ||||||||||||||||| |   ||||||||  ||| ||| ||| | ||||| ||||||||||| ||| ||||||||||||| ||| ||||||||| | |     
T  28279716 gtgtttggattgagagtctataaggggaagggaggagagggtttacttttcctttttaaattatggaatatataacatgttttttctaaaataaactaag 28279617  T
Q  173 tgtgattgaagtattat 189  Q
    |||||||||||||||||    
T  28279616 tgtgattgaagtattat 28279600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 73 - 189
Target Start/End: Complemental strand, 36392389 - 36392274
Alignment:
Q  73 cgtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttac 172  Q
    ||||||||||||||| |||| ||||||||||| || || | ||| |  |||| ||||||||||||||| ||||||| || || || ||||||| ||| |     
T  36392389 cgtgtttggattgagggtttaggaggggaagagagcggtgtgtttatatttcgtttttaaattacggactatataatatatt-ttctaaaatagattaag 36392291  T
Q  173 tgtgattgaagtattat 189  Q
    |||||||||||||||||    
T  36392290 tgtgattgaagtattat 36392274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 11756883 - 11756997
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||| |||||||| | | ||| ||||||   |||| |||||||||||||| | |||||||||||||  | ||||||||||| | |    
T  11756883 gtgtttggattgagggtttaggaggggagggatggg-agagtttgtttttattttttaaattacgaactatataacatgtttctctaaaataaattaagt 11756981  T
Q  174 gtgattgaagtattat 189  Q
    |||||| |||||||||    
T  11756982 gtgattaaagtattat 11756997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 71 - 141
Target Start/End: Complemental strand, 36363274 - 36363204
Alignment:
Q  71 tacgtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggat 141  Q
    ||||||||||||| ||| |||| ||||||||||  ||| ||||||||| ||||| ||||||||||||||||    
T  36363274 tacgtgtttggatggagggtttaggaggggaagggaggagagagttcacttttcatttttaaattacggat 36363204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 42681504 - 42681573
Alignment:
Q  120 ttttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    |||| |||||| ||||||||| ||||||||||||| || |||||||| |||| ||||||| |||||||||    
T  42681504 ttttttttttttaattacggactatataacatgtttttctaaaataattttagtgtgattaaagtattat 42681573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 15986863 - 15986768
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatt 169  Q
    |||||||||||||| |||| |||||||||| ||| |||| | ||| |||| |||||||||||||| |  || ||| ||||  ||||||||||||||    
T  15986863 gtgtttggattgagggtttaggaggggaaggaagaggagggctcacttttattttttaaattacgaacaatgtaaaatgtctttttaaaataaatt 15986768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 74 - 169
Target Start/End: Complemental strand, 20147109 - 20147020
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatt 169  Q
    |||||||||||||| |||| ||||||||||     |||| ||| | ||||| ||||||||||||||||||||| ||||||| || |||||||||||    
T  20147109 gtgtttggattgagggtttaggaggggaag-----ggagggtttacttttcatttttaaattacggattatat-acatgtttttctaaaataaatt 20147020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 110 - 189
Target Start/End: Original strand, 37606936 - 37607014
Alignment:
Q  110 gagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    ||||||| | ||||| ||||||||||| ||| ||||||| ||||| ||||||||||||||   |||||||||||||||||    
T  37606936 gagagtttacttttcgtttttaaattaaggactatataa-atgtttttttaaaataaattatatgtgattgaagtattat 37607014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 126 - 189
Target Start/End: Complemental strand, 39966139 - 39966076
Alignment:
Q  126 tttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    |||||||||||||||||||||||||| || |||| ||||||||| |  ||||||||| ||||||    
T  39966139 tttttaaattacggattatataacatattttttttaaataaattaaacgtgattgaattattat 39966076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 131 - 189
Target Start/End: Complemental strand, 8503017 - 8502959
Alignment:
Q  131 aaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    |||||||||| ||||||||||| | || ||||||||||| | |||||||||||||||||    
T  8503017 aaattacggactatataacatgcttttctaaaataaattaagtgtgattgaagtattat 8502959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 14245093 - 14245159
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacgga 140  Q
    |||||||||||||| |||| ||||||||||  |||||||  || | |||||||||||||||||||||    
T  14245093 gtgtttggattgagggtttaggaggggaagggaggggaggatttacttttcttttttaaattacgga 14245159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 35; E-Value: 0.00000000007
Query Start/End: Original strand, 120 - 182
Target Start/End: Original strand, 22022901 - 22022963
Alignment:
Q  120 ttttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaa 182  Q
    |||| |||||||||||||||| |||||||||| || || ||||||||||| | ||||||||||    
T  22022901 tttttttttttaaattacggactatataacatatttttctaaaataaattaagtgtgattgaa 22022963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 120 - 189
Target Start/End: Complemental strand, 10072840 - 10072771
Alignment:
Q  120 ttttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    |||||||||||||||||| ||   ||||||||||| || ||||||||||| | | |||||||||||||||    
T  10072840 ttttcttttttaaattaccgacggtataacatgtttttctaaaataaattaagtatgattgaagtattat 10072771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 123 - 169
Target Start/End: Original strand, 43430 - 43477
Alignment:
Q  123 tcttttttaaattacggattatataacatg-ttattttaaaataaatt 169  Q
    |||||||||||||| ||||||||||||||| || ||||||||||||||    
T  43430 tcttttttaaattagggattatataacatgttttttttaaaataaatt 43477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 74 - 141
Target Start/End: Complemental strand, 10650653 - 10650586
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggat 141  Q
    ||||||||||||| ||||||||||||||||  ||| || |||| | ||||  ||||||||||||||||    
T  10650653 gtgtttggattgaaagtttgggaggggaagggaggagaaagtttactttttgtttttaaattacggat 10650586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 120 - 167
Target Start/End: Original strand, 40815348 - 40815395
Alignment:
Q  120 ttttcttttttaaattacggattatataacatgttattttaaaataaa 167  Q
    |||||||||||||||||| || ||||||||||||| || |||||||||    
T  40815348 ttttcttttttaaattacagactatataacatgtttttataaaataaa 40815395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 1658052 - 1657986
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacgga 140  Q
    |||||||||| ||| |||| ||||||||||  ||||||| ||| | ||||| |||||||||||||||    
T  1658052 gtgtttggatggagggtttaggaggggaagggaggggagggtttacttttcatttttaaattacgga 1657986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 7544375 - 7544309
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacgga 140  Q
    |||||||||| ||| |||| |||||||||| |||||||| |||   ||||| |||||||||||||||    
T  7544375 gtgtttggatggagggtttaggaggggaaggaaggggagggtttggttttcatttttaaattacgga 7544309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 14245285 - 14245219
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacgga 140  Q
    |||||||||||||| |||| ||||||||||  ||||||| |||   ||||| |||||||||||||||    
T  14245285 gtgtttggattgagggtttaggaggggaagggaggggagggtttgtttttcatttttaaattacgga 14245219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 16502031 - 16501914
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaaga-aaggggagagttcaattttcttttttaaattacggattatataacatgttattt-taaaataaattta 171  Q
    |||||||||||||| |||| |||||| |||| | |||||||  | | |||| |||||||||||||||| |||||| ||| || ||| ||||||||||  |    
T  16502031 gtgtttggattgagggtttaggagggaaagagagggggagaaattacttttattttttaaattacggactatatatcatattttttctaaaataaatcaa 16501932  T
Q  172 ctgtgattgaagtattat 189  Q
     ||||||| |||| ||||    
T  16501931 gtgtgattaaagttttat 16501914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 13634950 - 13634886
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacg 138  Q
    |||||||||||||| |||| ||||||||||  ||||||| | | | ||||| |||||||||||||    
T  13634950 gtgtttggattgagggtttaggaggggaagggaggggaggggttacttttcatttttaaattacg 13634886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 40305904 - 40305840
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacg 138  Q
    |||||||||||||| |||| ||||| ||||  ||||||||  ||| |||| ||||||||||||||    
T  40305904 gtgtttggattgagggtttaggaggagaagggaggggagaactcatttttattttttaaattacg 40305840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 60; Significance: 8e-26; HSPs: 32)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 27735750 - 27735865
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||| ||| |||| ||||||||||  | | ||| ||| ||||||| ||||||||||||||| ||||||||||||| |||||||||||||| | |    
T  27735750 gtgtttggatcgagggtttaggaggggaagggaagagagggtttaattttcatttttaaattacggactatataacatgtttttttaaaataaattaagt 27735849  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||||||||    
T  27735850 gtgattgaagtattat 27735865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 60; E-Value: 8e-26
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 31348560 - 31348445
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    ||||||||||||||||||| ||||||||||  ||||||| ||| | ||||||||||||||| ||||| ||||||||||||| || |||||||||||   |    
T  31348560 gtgtttggattgagagtttaggaggggaagggaggggagggtttacttttcttttttaaataacggactatataacatgtttttctaaaataaattatgt 31348461  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||| ||||||    
T  31348460 gtgattgaattattat 31348445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 1968598 - 1968483
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||| ||||||||||  |||| |||||| ||||||| ||||||||||||||| ||||||| ||||| || ||||||||||    |    
T  1968598 gtgtttggattgagggtttaggaggggaagggagggaagagtttaattttcatttttaaattacggactatataatatgtttttctaaaataaatcaggt 1968499  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||||||||    
T  1968498 gtgattgaagtattat 1968483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 26166942 - 26167057
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||| |||||||||   |||||||||||   |||||||||||||||||| || |||||||||||||  | ||||||||||| | |    
T  26166942 gtgtttggattgagggtttaggaggggaatggaggggagagtttgtttttcttttttaaattacagactatataacatgtttctctaaaataaattaagt 26167041  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||||||||    
T  26167042 gtgattgaagtattat 26167057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 55; E-Value: 8e-23
Query Start/End: Original strand, 74 - 187
Target Start/End: Original strand, 54935072 - 54935186
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaagggg-agagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttac 172  Q
    |||||||||||||| |||| ||||||||||  ||||| || ||| | ||||||||||||||||||| | ||||||||||||| || ||||||||||| |     
T  54935072 gtgtttggattgagggtttaggaggggaagggagggggagggtttacttttcttttttaaattacgaactatataacatgtttttctaaaataaattaag 54935171  T
Q  173 tgtgattgaagtatt 187  Q
    |||||||||||||||    
T  54935172 tgtgattgaagtatt 54935186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 82 - 189
Target Start/End: Original strand, 6891373 - 6891480
Alignment:
Q  82 attgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattga 181  Q
    |||||| |||| | ||||||||| |||||| |||| | |||||||||||||| |||  ||||||||||||||| || ||||||||||| | |||||||||    
T  6891373 attgagggtttagaaggggaagagaggggatagtttatttttcttttttaaaatacaaattatataacatgtttttctaaaataaattaagtgtgattga 6891472  T
Q  182 agtattat 189  Q
    ||||||||    
T  6891473 agtattat 6891480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 46007940 - 46007825
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||| ||||||||||  ||||||| ||| | |||||||||||||||| | || |||||||| |||| || ||||||||||| | |    
T  46007940 gtgtttggattgagggtttaggaggggaagggaggggagggtttacttttcttttttaaattgcagactatataacttgtttttgtaaaataaattaagt 46007841  T
Q  174 gtgattgaagtattat 189  Q
    | ||||||||||||||    
T  46007840 gagattgaagtattat 46007825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 74 - 169
Target Start/End: Original strand, 51329801 - 51329896
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatt 169  Q
    ||||||||||||||||||| |||||||||||||| |||||||||||||||  ||||||||||||| |  | | || ||||| ||||||||||||||    
T  51329801 gtgtttggattgagagtttaggaggggaagaaagaggagagttcaattttaatttttaaattacgaacaacacaaaatgtttttttaaaataaatt 51329896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 35248738 - 35248806
Alignment:
Q  121 tttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    |||||||||||||||||||| ||||||||||||| || ||||||||||| | |||||||||||||||||    
T  35248738 tttcttttttaaattacggactatataacatgtttttctaaaataaattaagtgtgattgaagtattat 35248806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 47433948 - 47433832
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattata-taacatgttattttaaaataaatttac 172  Q
    |||||||| ||||  |||| ||||||||||  || |||| ||| | |||||||||||||||||| || |||| ||||||||| |||||||||||||| |     
T  47433948 gtgtttgggttgacggtttaggaggggaagggagaggagggtttacttttcttttttaaattacagactataataacatgtttttttaaaataaattaag 47433849  T
Q  173 tgtgattgaagtattat 189  Q
    |||||||||||||||||    
T  47433848 tgtgattgaagtattat 47433832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 37711143 - 37711263
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaag--aa---aggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaat 168  Q
    |||||||||||||| |||| ||||||||||  ||   ||||||| |||   ||||||||||||||||||||| |||||||||||||  | ||||||||||    
T  37711143 gtgtttggattgagggtttaggaggggaagggaagggaggggagggtttgtttttcttttttaaattacggactatataacatgtttctctaaaataaat 37711242  T
Q  169 ttactgtgattgaagtattat 189  Q
    | | |||||||||||||||||    
T  37711243 taagtgtgattgaagtattat 37711263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 45741895 - 45742010
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||| |||||||||  || | |||  || | |||| |||||||||||||||| |||||||| |||| || ||||||||||| | |    
T  45741895 gtgtttggattgagggtttaggaggggaatgaatgtgaggatttacttttgttttttaaattacggactatataacttgtttttctaaaataaattaaat 45741994  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||||||||    
T  45741995 gtgattgaagtattat 45742010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 56135754 - 56135869
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||| ||||||||||  ||||||| ||||| |||| |||||||||||||| |  || ||| ||||| |||||||||||||| | |    
T  56135754 gtgtttggattgagggtttaggaggggaagggaggggagggttcatttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaattaagt 56135853  T
Q  174 gtgattgaagtattat 189  Q
    ||  ||||||||||||    
T  56135854 gtttttgaagtattat 56135869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 5731070 - 5730954
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttctttttt-aaattacggattatataacatgttattttaaaataaatttac 172  Q
    ||||||| |||||| |||| ||||||||||  |||||||||||   ||| ||||||| |||||||||| |||||||||||||  | ||||||||||| |     
T  5731070 gtgtttgaattgagggtttaggaggggaagggaggggagagtttgttttactttttttaaattacggactatataacatgtttctctaaaataaattaag 5730971  T
Q  173 tgtgattgaagtattat 189  Q
    ||| |||||||||||||    
T  5730970 tgtaattgaagtattat 5730954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 45132734 - 45132625
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    ||||||| ||||||||||| ||||||||||| ||| ||  ||| | ||||||||||||||||||||| ||||||| |||      ||||||||||| | |    
T  45132734 gtgtttgaattgagagtttaggaggggaagagaggagatggtttacttttcttttttaaattacggactatataatatg------taaaataaattaagt 45132641  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||||||||    
T  45132640 gtgattgaagtattat 45132625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 74 - 189
Target Start/End: Complemental strand, 2248040 - 2247927
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||| ||||| ||||  | ||||||||| | |||||||||||||||||| || ||||||||||||| || ||||| |||| |  |    
T  2248040 gtgtttggattgagggtttaggaggagaagtgaagggagagtttacttttcttttttaaattacaga-tatataacatgtttttctaaaaaaaatat-gt 2247943  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||||||||    
T  2247942 gtgattgaagtattat 2247927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 75 - 189
Target Start/End: Complemental strand, 17938346 - 17938231
Alignment:
Q  75 tgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacat-gttattttaaaataaatttact 173  Q
    |||||||||||||| ||| ||||||||||  ||  ||||||| | ||||||||||||||||||  | ||||||||||  || |||| ||||||||| | |    
T  17938346 tgtttggattgagaatttaggaggggaagggagatgagagtttacttttcttttttaaattacaaactatataacatatttttttttaaataaattaagt 17938247  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||||||||    
T  17938246 gtgattgaagtattat 17938231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 54320440 - 54320554
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||| |||||| |||  |||| || |||  ||||||||||||||||||| || |||||| |||||| || ||||||||||| | |    
T  54320440 gtgtttggattgagggtttaggagggaaagggaggg-agggtttgattttcttttttaaattaccgactatatatcatgtttttctaaaataaattaagt 54320538  T
Q  174 gtgattgaagtattat 189  Q
    ||||||| ||||||||    
T  54320539 gtgattggagtattat 54320554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.00000000000007
Query Start/End: Original strand, 126 - 189
Target Start/End: Complemental strand, 2917150 - 2917087
Alignment:
Q  126 tttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    |||||||||| |||| ||||||||||| | || ||||||||||||| |||||||||||||||||    
T  2917150 tttttaaattccggactatataacatgattttctaaaataaatttattgtgattgaagtattat 2917087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 74 - 140
Target Start/End: Original strand, 49735473 - 49735539
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacgga 140  Q
    |||||||||||||| |||| ||||||||||  ||||||| ||||| ||||| |||||||||||||||    
T  49735473 gtgtttggattgagggtttaggaggggaagggaggggagggttcacttttcatttttaaattacgga 49735539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 74 - 154
Target Start/End: Original strand, 29798293 - 29798373
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgtt 154  Q
    |||||||||||||  |||| ||||||||||| || ||| |||| | |||| ||||||||||||| || |||||||||||||    
T  29798293 gtgtttggattgatggtttaggaggggaagagagaggatagtttacttttattttttaaattacagactatataacatgtt 29798373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 125 - 189
Target Start/End: Original strand, 36151632 - 36151696
Alignment:
Q  125 ttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    |||| |||||||| || ||||||||||||| || ||||||||||| | |||||||||||||||||    
T  36151632 ttttataaattacagactatataacatgtttttctaaaataaattaagtgtgattgaagtattat 36151696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 89 - 189
Target Start/End: Complemental strand, 49735691 - 49735592
Alignment:
Q  89 gtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtatta 188  Q
    |||| ||||||||||  ||||||| ||| | |||||||||||||| |||||| ||||||||||||| || ||||||||||  | |||||| ||| |||||    
T  49735691 gtttaggaggggaagggaggggag-gtttagttttcttttttaaactacggactatataacatgtttttctaaaataaatcaagtgtgatagaaatatta 49735593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 74 - 138
Target Start/End: Complemental strand, 7977736 - 7977672
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacg 138  Q
    |||||||||||||| ||||  ||||||||   ||||||| |||||||||| ||||||||||||||    
T  7977736 gtgtttggattgagggtttatgaggggaaaggaggggagggttcaattttattttttaaattacg 7977672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 121 - 189
Target Start/End: Original strand, 41174397 - 41174465
Alignment:
Q  121 tttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    |||||||||||||||| ||| |||||| |||||| || ||||||||||  | ||||||||| |||||||    
T  41174397 tttcttttttaaattagggactatatagcatgtttttctaaaataaatcaaatgtgattgatgtattat 41174465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 32; E-Value: 0.000000004
Query Start/End: Original strand, 78 - 189
Target Start/End: Original strand, 16400809 - 16400920
Alignment:
Q  78 ttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttactgtga 177  Q
    |||||||||| |||| ||||| ||||  |||||||  |||| |||| ||||||| | |||  | |||| |||||||| || ||||||||||| | | |||    
T  16400809 ttggattgagggtttaggaggagaagggaggggaggattcacttttattttttatactacaaactatacaacatgtttttctaaaataaattaattatga 16400908  T
Q  178 ttgaagtattat 189  Q
    ||||||||||||    
T  16400909 ttgaagtattat 16400920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 54320673 - 54320607
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacgga 140  Q
    |||||||||||||| |||| ||||||||||  ||||||| |||  |||||  |||||||||||||||    
T  54320673 gtgtttggattgagggtttaggaggggaagggaggggagggtttgattttaatttttaaattacgga 54320607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 74 - 140
Target Start/End: Complemental strand, 54935308 - 54935242
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacgga 140  Q
    |||||||||| ||| |||| ||||||||||  ||||||| ||| | ||||| |||||||||||||||    
T  54935308 gtgtttggatggagggtttaggaggggaagggaggggagggtttatttttcatttttaaattacgga 54935242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 28332855 - 28332924
Alignment:
Q  120 ttttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    ||||||||||||||||||  | ||||||||| ||| || |||| |||||| | | |||||||||||||||    
T  28332855 ttttcttttttaaattacatactatataacaggtttttctaaagtaaattaagtatgattgaagtattat 28332924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 44784043 - 44784112
Alignment:
Q  120 ttttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    ||||||||||||||||||  |  |||||||| ||| || |||| |||||| | |||||||||||||||||    
T  44784043 ttttcttttttaaattacataccatataacaggtttttctaaagtaaattaagtgtgattgaagtattat 44784112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 88 - 136
Target Start/End: Complemental strand, 6891585 - 6891537
Alignment:
Q  88 agtttgggaggggaagaaaggggagagttcaattttcttttttaaatta 136  Q
    ||||| ||||||||||| |||||||||||  |||||| |||||||||||    
T  6891585 agtttaggaggggaagagaggggagagtttgattttcgtttttaaatta 6891537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 74 - 138
Target Start/End: Original strand, 37761470 - 37761534
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacg 138  Q
    ||||||||||||||||||| ||||| |||   |||| |||||||| ||||  |||||||||||||    
T  37761470 gtgtttggattgagagtttaggaggagaaaggagggtagagttcacttttaatttttaaattacg 37761534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 59; Significance: 3e-25; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 59; E-Value: 3e-25
Query Start/End: Original strand, 74 - 164
Target Start/End: Original strand, 1177 - 1267
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaat 164  Q
    |||||||||||||| |||| ||||||||||| ||||||||||| | ||||||||||||||||||||| ||| |||||||||||| ||||||    
T  1177 gtgtttggattgagggtttaggaggggaagagaggggagagtttacttttcttttttaaattacggactatgtaacatgttattctaaaat 1267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0096 (Bit Score: 56; Significance: 2e-23; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 74 - 189
Target Start/End: Original strand, 6589 - 6704
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||   ||| ||||| ||||  ||||||| ||| | |||||||||||||||||| || |||||||| ||||||| ||||||||||||| |    
T  6589 gtgtttggattgaagttttaggaggagaagggaggggagggtttacttttcttttttaaattacagactatataacttgttattctaaaataaatttagt 6688  T
Q  174 gtgattgaagtattat 189  Q
    ||||||||||||||||    
T  6689 gtgattgaagtattat 6704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0067 (Bit Score: 50; Significance: 8e-20; HSPs: 1)
Name: scaffold0067
Description:

Target: scaffold0067; HSP #1
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 74 - 183
Target Start/End: Complemental strand, 39429 - 39320
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttact 173  Q
    |||||||||||||| |||| | |||| |||  ||||||| ||| | ||||||||||||||||||||| ||| ||||||||| || ||||||||||| | |    
T  39429 gtgtttggattgagggtttagaagggaaagggaggggagggtttacttttcttttttaaattacggactatgtaacatgtttttctaaaataaattaagt 39330  T
Q  174 gtgattgaag 183  Q
    ||||||||||    
T  39329 gtgattgaag 39320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0198 (Bit Score: 44; Significance: 3e-16; HSPs: 1)
Name: scaffold0198
Description:

Target: scaffold0198; HSP #1
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 74 - 137
Target Start/End: Original strand, 3152 - 3215
Alignment:
Q  74 gtgtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattac 137  Q
    ||||||||||||||||||| ||||||||||  ||||||||||| | ||||||||||||||||||    
T  3152 gtgtttggattgagagtttaggaggggaagggaggggagagtttacttttcttttttaaattac 3215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 110 - 187
Target Start/End: Original strand, 15991 - 16068
Alignment:
Q  110 gagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtatt 187  Q
    ||||||| | |||||||||||||||||| || ||||||||||||| |||||||| |||||   |||||||||||||||    
T  15991 gagagtttacttttcttttttaaattacagactatataacatgtttttttaaaaaaaattatgtgtgattgaagtatt 16068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0294 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0294
Description:

Target: scaffold0294; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 120 - 189
Target Start/End: Original strand, 15314 - 15383
Alignment:
Q  120 ttttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    |||| ||||||||| ||||||||| |||||||||| || ||||||||||| | |||| ||||||||||||    
T  15314 tttttttttttaaactacggattacataacatgtttttctaaaataaattaagtgtggttgaagtattat 15383  T

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Target: scaffold0262 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 105 - 189
Target Start/End: Complemental strand, 16504 - 16420
Alignment:
Q  105 aaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaatttactgtgattgaagtattat 189  Q
    |||||||| ||| | ||||| ||||||| | ||||| |||||||||||||  | ||||||||||| | |||||||||||||||||    
T  16504 aaggggagggtttacttttcgtttttaactcacggactatataacatgtttgtctaaaataaattaagtgtgattgaagtattat 16420  T

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Target: scaffold0119 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0119
Description:

Target: scaffold0119; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 76 - 168
Target Start/End: Original strand, 37390 - 37482
Alignment:
Q  76 gtttggattgagagtttgggaggggaagaaaggggagagttcaattttcttttttaaattacggattatataacatgttattttaaaataaat 168  Q
    ||||| ||||||  ||| |||||| ||| |||||||| | ||| |||| |||||||||||||| |  || ||| ||||| |||||||||||||    
T  37390 gtttgaattgaggatttaggagggcaaggaaggggagggctcacttttattttttaaattacgaacaatgtaaaatgtttttttaaaataaat 37482  T

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