View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15696_high_27 (Length: 265)
Name: NF15696_high_27
Description: NF15696
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15696_high_27 |
 |  |
|
Alignment Details
Target: chr4 (Bit Score: 224; Significance: 1e-123; HSPs: 15)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 248
Target Start/End: Complemental strand, 4019697 - 4019450
Alignment:
| Q |
1 |
ctttgttgatgatgagcttaagaggggagatgaaataccacaatcacttggcagaggaattgaaggatcactaatttccttgatcatattctcacaagac |
100 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
4019697 |
ctttgttgatgatgagcttaagaggggagatgaaatactacaatcacttgtcagaggaattgaaggatcattaatttccttgatcatattctcacaagac |
4019598 |
T |
 |
| Q |
101 |
tatgcttcttcacgctggtgtttggaagaacttgtcacaatacttcaatgcagagagaaatatggacagattgttgtacctattttttatgagatagatc |
200 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||| |
|
|
| T |
4019597 |
tatgcttcttcacgctggtgtttggaagaacttgtcacaatacttcaatgcagagagaaatatggacaaattgttgtacctattttttatgggatagatc |
4019498 |
T |
 |
| Q |
201 |
ctgcagatggaagatatcaaatgaagagttatgaaaatgcatttgttg |
248 |
Q |
| |
|
||||||||| |||||||||||||||||||||||||||||||||||||| |
|
|
| T |
4019497 |
ctgcagatgtaagatatcaaatgaagagttatgaaaatgcatttgttg |
4019450 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 156; E-Value: 6e-83
Query Start/End: Original strand, 1 - 248
Target Start/End: Original strand, 3962378 - 3962625
Alignment:
| Q |
1 |
ctttgttgatgatgagcttaagaggggagatgaaataccacaatcacttggcagaggaattgaaggatcactaatttccttgatcatattctcacaagac |
100 |
Q |
| |
|
|||||| |||||| | |||||||||||||||||||||||||||||||||| ||||| |||||||||||| ||||||||||||||||||| ||||| ||| |
|
|
| T |
3962378 |
ctttgtagatgataaacttaagaggggagatgaaataccacaatcacttgtcagagcaattgaaggatcgttaatttccttgatcatattttcacacgac |
3962477 |
T |
 |
| Q |
101 |
tatgcttcttcacgctggtgtttggaagaacttgtcacaatacttcaatgcagagagaaatatggacagattgttgtacctattttttatgagatagatc |
200 |
Q |
| |
|
|||||||||||| | |||||||| ||||||||||| |||| |||||||||||||||||||||||||||||| ||| |||||||||||||| || |||||| |
|
|
| T |
3962478 |
tatgcttcttcatgttggtgtttagaagaacttgttacaacacttcaatgcagagagaaatatggacagatcgttatacctattttttatcaggtagatc |
3962577 |
T |
 |
| Q |
201 |
ctgcagatggaagatatcaaatgaagagttatgaaaatgcatttgttg |
248 |
Q |
| |
|
|| |||||| ||||||||||| ||||||||||| ||||||||||||| |
|
|
| T |
3962578 |
ctacagatgtaagatatcaaaacaagagttatgataatgcatttgttg |
3962625 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 190
Target Start/End: Complemental strand, 3825940 - 3825751
Alignment:
| Q |
1 |
ctttgttgatgatgagcttaagaggggagatgaaataccacaatcacttggcagaggaattgaaggatcactaatttccttgatcatattctcacaagac |
100 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
3825940 |
ctttgttgatgatgaacttaagaggggagatgaaataccacaatcacttgtaagaggaaatgaaggatcattaatttccttgatcatattctcacaagac |
3825841 |
T |
 |
| Q |
101 |
tatgcttcttcacgctggtgtttggaagaacttgtcacaatacttcaatgcagagagaaatatggacagattgttgtacctattttttat |
190 |
Q |
| |
|
|||||||||||| | |||||||| ||||||| ||||||||||| |||||||||||||||||||||||| |||||| ||||| |||||||| |
|
|
| T |
3825840 |
tatgcttcttcatgttggtgtttagaagaacatgtcacaatacgtcaatgcagagagaaatatggacaaattgttatacctgttttttat |
3825751 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 8 - 248
Target Start/End: Complemental strand, 3805956 - 3805726
Alignment:
| Q |
8 |
gatgatgagcttaagaggggagatgaaataccacaatcacttggcagaggaattgaaggatcactaatttccttgatcatattctcacaagactatgctt |
107 |
Q |
| |
|
|||||||| ||||| |||||||||||||||||||||||||||| || |||||| | ||| ||||||||||||| | ||| ||| |||||||| |
|
|
| T |
3805956 |
gatgatgaacttaaaaggggagatgaaataccacaatcacttgtca---------aaggattattaacttccttgatcataat-tcagaaggctatgctt |
3805867 |
T |
 |
| Q |
108 |
cttcacgctggtgtttggaagaacttgtcacaatacttcaatgcagagagaaatatggacagattgttgtacctattttttatgagatagatcctgcaga |
207 |
Q |
| |
|
||||| | ||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||||||||||||||| |
|
|
| T |
3805866 |
cttcatgttggtgtttggacgaacttgtcacaatacttcaatgcagaaagaaatatggacagattgttatacctattttttatgggatagatcctgcaga |
3805767 |
T |
 |
| Q |
208 |
tggaagatatcaaatgaagagttatgaaaatgcatttgttg |
248 |
Q |
| |
|
|| |||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
3805766 |
tgtaagatatcaaatgaagggttatgaaaatgcatttgttg |
3805726 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 92; E-Value: 9e-45
Query Start/End: Original strand, 1 - 112
Target Start/End: Complemental strand, 3792787 - 3792676
Alignment:
| Q |
1 |
ctttgttgatgatgagcttaagaggggagatgaaataccacaatcacttggcagaggaattgaaggatcactaatttccttgatcatattctcacaagac |
100 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||| |||||||||| ||||||||||||||||||||||||||||| |
|
|
| T |
3792787 |
ctttgttgatgatgaacttaagaggggagatgaaataccacaatcacttgtaagaggaaatgaaggatcattaatttccttgatcatattctcacaagac |
3792688 |
T |
 |
| Q |
101 |
tatgcttcttca |
112 |
Q |
| |
|
|||||||||||| |
|
|
| T |
3792687 |
tatgcttcttca |
3792676 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 247
Target Start/End: Complemental strand, 4220907 - 4220677
Alignment:
| Q |
17 |
cttaagaggggagatgaaataccacaatcacttggcagaggaattgaaggatcactaatttccttgatcatattctcacaagactatgcttcttcacgct |
116 |
Q |
| |
|
||||||| |||||||| ||| |||| |||||||| || ||||||||||||| ||||| ||| |||||||||| || ||||||||||||||| | |
|
|
| T |
4220907 |
cttaagaaaggagatgacatatcacattcacttggtgaagcaattgaaggatcatccatttcattggtcatattctctgaaaactatgcttcttcacatt |
4220808 |
T |
 |
| Q |
117 |
ggtgtttggaagaacttgtcacaatacttcaatgcagagagaaatatggacagattgttgtacctattttttatgagatagatcctgcagatggaagata |
216 |
Q |
| |
|
||||||| ||||||||||| | |||| || | |||||||||||||||||||| |||| |||||||||| || ||| |||||||| || ||| | |||| |
|
|
| T |
4220807 |
ggtgtttagaagaacttgtaaaaataattgagtgcagagagaaatatggacaacttgtaatacctattttctacgaggtagatcctacaaatgtacgata |
4220708 |
T |
 |
| Q |
217 |
tcaaatgaagagttatgaaaatgcatttgtt |
247 |
Q |
| |
|
||||| ||||||||||||||||||||||||| |
|
|
| T |
4220707 |
tcaaaagaagagttatgaaaatgcatttgtt |
4220677 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 58 - 246
Target Start/End: Original strand, 3953041 - 3953229
Alignment:
| Q |
58 |
aattgaaggatcactaatttccttgatcatattctcacaagactatgcttcttcacgctggtgtttggaagaacttgtcacaatacttcaatgcagagag |
157 |
Q |
| |
|
|||||||||||| | ||||| ||||||||||||||| || |||||||||||||||| |||||||| ||||||||||| | |||| || | ||||||||| |
|
|
| T |
3953041 |
aattgaaggatcgttcatttcattgatcatattctcagaaaactatgcttcttcacgttggtgtttagaagaacttgtgaaaataattgagtgcagagag |
3953140 |
T |
 |
| Q |
158 |
aaatatggacagattgttgtacctattttttatgagatagatcctgcagatggaagatatcaaatgaagagttatgaaaatgcatttgt |
246 |
Q |
| |
|
||| ||||||||||||| ||||| |||| || ||| ||| |||| |||||| | || |||||| ||||||||||||||||||| |||| |
|
|
| T |
3953141 |
aaaaatggacagattgtaatacctgttttctacgaggtaggtcctacagatgtacgacatcaaaagaagagttatgaaaatgcacttgt |
3953229 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 4011900 - 4011656
Alignment:
| Q |
1 |
ctttgttgatgatgagcttaagaggggagatgaaataccacaatcacttggcagaggaattgaaggatcactaatttccttgatcatattctcacaagac |
100 |
Q |
| |
|
|||||||||||| | ||||||||||||||||| || |||| ||||||| || |||||||||||| | ||||| ||| ||||||||||| || || |
|
|
| T |
4011900 |
ctttgttgatgagaaacttaagaggggagatgacatgtcacattcacttgttgaagcaattgaaggatctcccatttcattggtcatattctcataaaac |
4011801 |
T |
 |
| Q |
101 |
tatgcttcttcacgctggtgtttggaagaacttgtcacaatacttcaatgcagagagaaatatggacagattgttgtacctattttttatgagatagatc |
200 |
Q |
| |
|
||||||| ||||| |||||||| |||||||||| | |||| || | |||| ||||||||||||||||||||| ||||| |||| |||| | |||||| |
|
|
| T |
4011800 |
tatgcttgttcacattggtgtttagaagaacttgcgaaaataattgagtgcaaagagaaatatggacagattgtaatacctgttttctatggggtagatc |
4011701 |
T |
 |
| Q |
201 |
ctgcagatggaagatatcaaatgaagagttatgaaaatgcatttg |
245 |
Q |
| |
|
|| || ||| | || |||||| ||||||||||||||||||||||| |
|
|
| T |
4011700 |
ctacaaatgtacgacatcaaaagaagagttatgaaaatgcatttg |
4011656 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 17 - 232
Target Start/End: Complemental strand, 4003405 - 4003190
Alignment:
| Q |
17 |
cttaagaggggagatgaaataccacaatcacttggcagaggaattgaaggatcactaatttccttgatcatattctcacaagactatgcttcttcacgct |
116 |
Q |
| |
|
||||||||||||||||| ||| |||| |||||| || ||||||||||||| | ||||| ||| ||||||||||| || ||||||||||||||| | |
|
|
| T |
4003405 |
cttaagaggggagatgatatatcacatgcacttgtagaagcaattgaaggatcattcatttcattggtcatattctcagaaaactatgcttcttcacatt |
4003306 |
T |
 |
| Q |
117 |
ggtgtttggaagaacttgtcacaatacttcaatgcagagagaaatatggacagattgttgtacctattttttatgagatagatcctgcagatggaagata |
216 |
Q |
| |
|
||||||| ||||||||||| | |||| || | |||| |||||||||||||| ||||||| ||||| |||| |||| | |||||||| || ||| |||| | |
|
|
| T |
4003305 |
ggtgtttagaagaacttgtgaaaataattgagtgcaaagagaaatatggacggattgttttacctgttttctatggggtagatcctacaaatgtaagaca |
4003206 |
T |
 |
| Q |
217 |
tcaaatgaagagttat |
232 |
Q |
| |
|
||||| |||||||||| |
|
|
| T |
4003205 |
tcaaaagaagagttat |
4003190 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 245
Target Start/End: Complemental strand, 4026657 - 4026413
Alignment:
| Q |
1 |
ctttgttgatgatgagcttaagaggggagatgaaataccacaatcacttggcagaggaattgaaggatcactaatttccttgatcatattctcacaagac |
100 |
Q |
| |
|
|||||||||||| | ||||||||||||||||| ||| | | ||||||| || ||| ||||||||| | ||||| ||||||||||||||| || || |
|
|
| T |
4026657 |
ctttgttgatgacaaacttaagaggggagatgacatatcgaattcacttgtagaagcaatagaaggatcattcatttcattgatcatattctcagaaaac |
4026558 |
T |
 |
| Q |
101 |
tatgcttcttcacgctggtgtttggaagaacttgtcacaatacttcaatgcagagagaaatatggacagattgttgtacctattttttatgagatagatc |
200 |
Q |
| |
|
|||||||||||| | |||||||| ||||||||| | | |||| || | |||| ||||||||||||||||||||| ||||| |||| |||| | |||||| |
|
|
| T |
4026557 |
tatgcttcttcaagttggtgtttagaagaacttttgaaaataattgattgcaaagagaaatatggacagattgtaatacctgttttctatggggtagatc |
4026458 |
T |
 |
| Q |
201 |
ctgcagatggaagatatcaaatgaagagttatgaaaatgcatttg |
245 |
Q |
| |
|
|| || | | | || ||| || |||||||||| ||||||||||| |
|
|
| T |
4026457 |
ctacaaacgtacgacatctaaaaaagagttatggaaatgcatttg |
4026413 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 17 - 243
Target Start/End: Complemental strand, 3812096 - 3811870
Alignment:
| Q |
17 |
cttaagaggggagatgaaataccacaatcacttggcagaggaattgaaggatcactaatttccttgatcatattctcacaagactatgcttcttcacgct |
116 |
Q |
| |
|
||||||||||||||||| ||| |||| ||||||| || ||| |||||||| | ||||| ||| ||||||||||| || ||||||||||||||| | |
|
|
| T |
3812096 |
cttaagaggggagatgacatatcacattcacttgtagaagcaatggaaggatctcccatttcattggtcatattctcagaaaactatgcttcttcacatt |
3811997 |
T |
 |
| Q |
117 |
ggtgtttggaagaacttgtcacaatacttcaatgcagagagaaatatggacagattgttgtacctattttttatgagatagatcctgcagatggaagata |
216 |
Q |
| |
|
||||||| || || ||||| | |||| || | |||| ||||| ||||||||| |||| |||||||||| || | |||||||| |||||| | || | |
|
|
| T |
3811996 |
ggtgtttagatgagcttgtgaaaataattgagtgcaaagagacatatggacattttgtaatacctattttctacggagtagatcctacagatgtacgaca |
3811897 |
T |
 |
| Q |
217 |
tcaaatgaagagttatgaaaatgcatt |
243 |
Q |
| |
|
||||| ||||||||||||||||||||| |
|
|
| T |
3811896 |
tcaaaagaagagttatgaaaatgcatt |
3811870 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 1 - 244
Target Start/End: Complemental strand, 3821685 - 3821442
Alignment:
| Q |
1 |
ctttgttgatgatgagcttaagaggggagatgaaataccacaatcacttggcagaggaattgaaggatcactaatttccttgatcatattctcacaagac |
100 |
Q |
| |
|
|||||||||||| | |||| |||||||||||| ||| |||| |||||| || |||||||||||| | ||||| ||| ||||||||||| || || |
|
|
| T |
3821685 |
ctttgttgatgacgcacttacgaggggagatgacatatcacattcactttttgaagcaattgaaggatctcccatttcattggtcatattctcaaaaaac |
3821586 |
T |
 |
| Q |
101 |
tatgcttcttcacgctggtgtttggaagaacttgtcacaatacttcaatgcagagagaaatatggacagattgttgtacctattttttatgagatagatc |
200 |
Q |
| |
|
||||||||||||| |||||||| || || ||||| | |||| | | |||| ||||||||||||||||||||| |||||||||| || | || | | |
|
|
| T |
3821585 |
tatgcttcttcacattggtgtttagatgagcttgtgaaaataatcgagtgcaaagagaaatatggacagattgtattacctattttctacggagtaaaac |
3821486 |
T |
 |
| Q |
201 |
ctgcagatggaagatatcaaatgaagagttatgaaaatgcattt |
244 |
Q |
| |
|
| || ||| | || |||||| |||||||||||||||||||||| |
|
|
| T |
3821485 |
ccacaaatgtacgacatcaaaagaagagttatgaaaatgcattt |
3821442 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 2 - 245
Target Start/End: Original strand, 3915943 - 3916186
Alignment:
| Q |
2 |
tttgttgatgatgagcttaagaggggagatgaaataccacaatcacttggcagaggaattgaaggatcactaatttccttgatcatattctcacaagact |
101 |
Q |
| |
|
||||||||||| | ||||||||||||||||| ||| || | |||||||| || ||| ||||||||| | ||||| ||||||||||||||| || ||| |
|
|
| T |
3915943 |
tttgttgatgacaaacttaagaggggagatgacatatcagattcacttggtgaagcaatcgaaggatcattcatttcattgatcatattctcagaaaact |
3916042 |
T |
 |
| Q |
102 |
atgcttcttcacgctggtgtttggaagaacttgtcacaatacttcaatgcagagagaaatatggacagattgttgtacctattttttatgagatagatcc |
201 |
Q |
| |
|
|||||| ||||| |||||||| |||||||||| | |||| || | || | ||||||||||| ||| ||||| ||||| |||| | | ||||||| |
|
|
| T |
3916043 |
atgcttgttcacattggtgtttaaaagaacttgtgaaaatagttgagtgtaaagagaaatatgcacaaattgtaatacctgttttcttcagggtagatcc |
3916142 |
T |
 |
| Q |
202 |
tgcagatggaagatatcaaatgaagagttatgaaaatgcatttg |
245 |
Q |
| |
|
| ||||| | || |||||| | |||||||||||||||||||| |
|
|
| T |
3916143 |
tacagatatacgacatcaaaaaaggagttatgaaaatgcatttg |
3916186 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 188 - 248
Target Start/End: Complemental strand, 3948350 - 3948290
Alignment:
| Q |
188 |
tatgagatagatcctgcagatggaagatatcaaatgaagagttatgaaaatgcatttgttg |
248 |
Q |
| |
|
|||||| ||||||||||||||| |||||||||||||||| ||||||||||||||||||||| |
|
|
| T |
3948350 |
tatgaggtagatcctgcagatgtaagatatcaaatgaagggttatgaaaatgcatttgttg |
3948290 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 18 - 135
Target Start/End: Complemental strand, 3988293 - 3988176
Alignment:
| Q |
18 |
ttaagaggggagatgaaataccacaatcacttggcagaggaattgaaggatcactaatttccttgatcatattctcacaagactatgcttcttcacgctg |
117 |
Q |
| |
|
||||||||||||||||||| ||| ||||||| || ||||||||| || ||||||| ||| ||||||||||| || | ||| ||||||||| || |
|
|
| T |
3988293 |
ttaagaggggagatgaaatcaaacattcacttgttgaagcaattgaaggctcgttaatttcattggtcatattctcaaaaaattattcttcttcacattg |
3988194 |
T |
 |
| Q |
118 |
gtgtttggaagaacttgt |
135 |
Q |
| |
|
|||||| || |||||||| |
|
|
| T |
3988193 |
gtgtttagatgaacttgt |
3988176 |
T |
 |
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[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 72; Significance: 8e-33; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 17 - 248
Target Start/End: Complemental strand, 13399246 - 13399015
Alignment:
| Q |
17 |
cttaagaggggagatgaaataccacaatcacttggcagaggaattgaaggatcactaatttccttgatcatattctcacaagactatgcttcttcacgct |
116 |
Q |
| |
|
|||||||||||| |||| ||| |||| |||||| || ||| ||||||||| | ||||| ||||||||||||||| || |||||||||||||||| | |
|
|
| T |
13399246 |
cttaagaggggaaatgacatatcacattcactttttgaagcaatcgaaggatcatttatttcattgatcatattctcagaaaactatgcttcttcacgtt |
13399147 |
T |
 |
| Q |
117 |
ggtgtttggaagaacttgtcacaatacttcaatgcagagagaaatatggacagattgttgtacctattttttatgagatagatcctgcagatggaagata |
216 |
Q |
| |
|
||||||| ||||||||||| | |||| || | |||| ||||||||||||||| ||||| ||||| |||| || | ||||||| | |||| | || | |
|
|
| T |
13399146 |
ggtgtttagaagaacttgtgaaaataattgagtgcaaagagaaatatggacaaattgtaatacctgttttctacggagtagatcccaccgatgtacgaca |
13399047 |
T |
 |
| Q |
217 |
tcaaatgaagagttatgaaaatgcatttgttg |
248 |
Q |
| |
|
||||| |||||||||||||||||||||||||| |
|
|
| T |
13399046 |
tcaaaagaagagttatgaaaatgcatttgttg |
13399015 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 26 - 135
Target Start/End: Complemental strand, 42862390 - 42862281
Alignment:
| Q |
26 |
ggagatgaaataccacaatcacttggcagaggaattgaaggatcactaatttccttgatcatattctcacaagactatgcttcttcacgctggtgtttgg |
125 |
Q |
| |
|
|||||||||||| || || |||||| || || |||||||||||||| || || ||||| ||||| || ||||||||||||||||| ||||| |||| |
|
|
| T |
42862390 |
ggagatgaaatatcaaaagcacttgtcaaagccattgaaggatcactcatgtctttgataatattttccaaagactatgcttcttcaaagtggtgcttgg |
42862291 |
T |
 |
| Q |
126 |
aagaacttgt |
135 |
Q |
| |
|
|||| ||||| |
|
|
| T |
42862290 |
aagagcttgt |
42862281 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 84 - 172
Target Start/End: Complemental strand, 7087050 - 7086962
Alignment:
| Q |
84 |
tcatattctcacaagactatgcttcttcacgctggtgtttggaagaacttgtcacaatacttcaatgcagagagaaatatggacagatt |
172 |
Q |
| |
|
|||||||||| ||| |||||||||||||| ||||||||||| || ||||||| ||| || | || ||||||||| ||||||||||| |
|
|
| T |
7087050 |
tcatattctctcaaaactatgcttcttcaaaatggtgtttggatgagcttgtcaaaattgttgagtgtagagagaaagatggacagatt |
7086962 |
T |
 |
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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