View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15696_high_33 (Length: 231)
Name: NF15696_high_33
Description: NF15696
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15696_high_33 |
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Alignment Details
Target: chr8 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 16 - 216
Target Start/End: Complemental strand, 40956396 - 40956196
Alignment:
| Q |
16 |
aagaatatggtatgacttgtgaactaaggatgtagtatatatagtctcgtaaattttgttttatacaggtgtgcttagtataaattaagtatgttcatga |
115 |
Q |
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| T |
40956396 |
aagaatatggtatgacttgtgaactaaggatgtagtatatatagtctcgtagattttgttttatacaggtgtgcttagtataaattaagtatgttcatga |
40956297 |
T |
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| Q |
116 |
atttctgtcaacaaaaacaaaaagtaagttcatgaataccatttactcttatttttaaaaaataataattaattattagattaattatggtttgtgatta |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
40956296 |
atttctgtcaacaaaaacaaaaagtaagttcatgaatatcatttactcttatttttaaaaaataataattaattattagattaattatagtttgtgatta |
40956197 |
T |
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| Q |
216 |
t |
216 |
Q |
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| T |
40956196 |
t |
40956196 |
T |
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