View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15696_high_7 (Length: 468)
Name: NF15696_high_7
Description: NF15696
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15696_high_7 |
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Alignment Details
Target: chr7 (Bit Score: 321; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 321; E-Value: 0
Query Start/End: Original strand, 105 - 458
Target Start/End: Original strand, 32974774 - 32975127
Alignment:
| Q |
105 |
tagcattggtacaaggatgtgaagtggagcaccaaagtgaaggataaagatggttacccttcatttgctttggtcaacaaagtaactggtgaggcaatta |
204 |
Q |
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| T |
32974774 |
tagcattggtacaaggatgtgaagtggagcaccaaagtgaaggataaagatggttacccttcatttgctttggtcaacaaagtaactggtgaggcaatta |
32974873 |
T |
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| Q |
205 |
agcattccattggtgcctcccatccagtaagatataactttctcaatttcctttttattcaagtttgtatctgaaatattttttagtattatctaacaaa |
304 |
Q |
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| T |
32974874 |
agcattccattggtgcctcccatccagtaagatataactttctcaatttcctttttattcaagtttgtatctgaaatattttttagtattatctaacaaa |
32974973 |
T |
|
| Q |
305 |
tgtgcattattgtttaatgcttactgtgctgattcgtgataattgaattataattttggttatttgaattattaaggtttttnnnnnnntatctcaattt |
404 |
Q |
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| T |
32974974 |
tgtgcattattgtttaatgctttctgtgctgattcgtgataattgaattagaattttggttatttgaattattaaggtttttaaaaaaatatctcaattt |
32975073 |
T |
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| Q |
405 |
tgatgtacaagcgaccacaatcaactatggttctctgaaataccaaagtctgtg |
458 |
Q |
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| T |
32975074 |
tgatgtacaagcgaccacaatcaactatgattctctgaaataccaaagtctgtg |
32975127 |
T |
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