View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15696_low_19 (Length: 333)
Name: NF15696_low_19
Description: NF15696
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15696_low_19 |
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Alignment Details
Target: chr8 (Bit Score: 293; Significance: 1e-164; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 293; E-Value: 1e-164
Query Start/End: Original strand, 22 - 330
Target Start/End: Complemental strand, 36540926 - 36540618
Alignment:
| Q |
22 |
atgtcaaagtgtgatttataagaaaactaagaatttggttatttgattgacagtgcaatgtctacggtggcagatgaaaatggtttgaggcatgtgttgc |
121 |
Q |
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| T |
36540926 |
atgtcaaagtgtgatttctaggaaaactaagaatttggttatttgattgacagtgcaatgtctacggtggcagatgaaaatggtttgaggcatgtgttgc |
36540827 |
T |
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| Q |
122 |
tatgcaaggtgatactaggaagggttgaaaatgtagctgttgattcaaaacagagccaacctagttgcaggcaatatgacacaggagttgatgacatttc |
221 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
36540826 |
tatgcaaggtgatactaggaagggttgaaaatgtacctgttgattcaaaacagagccaacctagttgcaggcaatatgacacaggagttgatgacatttc |
36540727 |
T |
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| Q |
222 |
atcacccagaaaacatattatatggactgcttttatgaattcacacattcatcctgagtatatcgtaagtttcaattataactacgtgaagggtaagttt |
321 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
36540726 |
atcacccagaaaacatattatatggactgcttttatgaattcacacattcatcctgagtatatcgtaagtttcaattataactatgtgaagggtaagttt |
36540627 |
T |
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| Q |
322 |
agtgttctt |
330 |
Q |
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||||||||| |
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| T |
36540626 |
agtgttctt |
36540618 |
T |
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