View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15697_high_1 (Length: 512)
Name: NF15697_high_1
Description: NF15697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15697_high_1 |
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Alignment Details
Target: chr2 (Bit Score: 458; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 458; E-Value: 0
Query Start/End: Original strand, 14 - 495
Target Start/End: Complemental strand, 45362724 - 45362243
Alignment:
| Q |
14 |
gagcagagattcgaggaactttaatcccttatcccttcttttaatatgtttcctttatgtctcattgccatgcacatgacgttgatcaatctatctggtt |
113 |
Q |
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| T |
45362724 |
gagcagagattcgaggaactttaatcccttatcccttcttttaatatgtttcctttatgtctcattgccatgcacatgacgttgatcaatctatctggtt |
45362625 |
T |
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| Q |
114 |
acagcaggattaattgtgcatacctttctccatgaaaagtttccacttattaaagtgctttctgaaacaataaatatccttggtcattgataatccacat |
213 |
Q |
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| T |
45362624 |
acagcaggattaattgtgcatacctttctccatgaaaagtttccacttattaaagtgctttctgaaacaataaatatccttggtcattgataatccacat |
45362525 |
T |
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| Q |
214 |
gaatgaaccggtccttcagcattattttacaaagaagctttacttttgcaatatgatgtggttggtttagattcaataaaatttaaaattcctaagtgaa |
313 |
Q |
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| T |
45362524 |
gaatgaaccggtccttcagcattattttacaaagaagctttacttttgcaatatgatgtggttggtttagattcaataaaatttaaaattcctaagtgaa |
45362425 |
T |
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| Q |
314 |
agacacagtagatattagattttggtactacagacagaactttcacactannnnnnnnggactgggattactgtttattgttgttgtaatttgtgaggtt |
413 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
45362424 |
agacacagtagatattagattttggtactacagacagaactttcacactattttttttggactgggattactgtttattgttgttgtaatttgtgaggtt |
45362325 |
T |
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| Q |
414 |
tgaagaatctttgtcttgaatttgattcctgcatggacggaactaagtatgtgacaaaagtggctatcgccacccttaatat |
495 |
Q |
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| T |
45362324 |
tgaagaatctttgtcttgaatttgattcctgcatggacggaactaagtatgtgacaaaagtggctatcgccacccttaatat |
45362243 |
T |
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