View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15697_low_12 (Length: 250)
Name: NF15697_low_12
Description: NF15697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15697_low_12 |
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Alignment Details
Target: chr8 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 1 - 246
Target Start/End: Complemental strand, 28751139 - 28750894
Alignment:
| Q |
1 |
ttggccttttttacttaagggagaatatcttcattttatacttgtctatatatattgtaagaagtgtgaccaaatgtgtgtaggggctttagattaccct |
100 |
Q |
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| T |
28751139 |
ttggccttttttacttaagggagaatatcttcattttatacttgtctatatatattgtaagaagtgtgaccaaatgtgtgtaggggctttagattaccct |
28751040 |
T |
|
| Q |
101 |
atgtattttgagcctttttcaatgtacatcagtgaatccagttttctttaaaaatgttgtcttccaagtaccaaacatctcatgaatgaaatactttgaa |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
28751039 |
atgtattttgagcctttttcaatgtacatcagtgaatccagttttctttaaaaatgttgtcttccaagtaccaaacatctcatgaatgaaatactttgaa |
28750940 |
T |
|
| Q |
201 |
aggatttcaaaagaatggttctgatatgtttctattcatctcactc |
246 |
Q |
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|||||||||||||||||||||||||||||||||||| || |||||| |
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| T |
28750939 |
aggatttcaaaagaatggttctgatatgtttctattgatttcactc |
28750894 |
T |
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