View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15697_low_3 (Length: 460)
Name: NF15697_low_3
Description: NF15697
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15697_low_3 |
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Alignment Details
Target: chr8 (Bit Score: 407; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 407; E-Value: 0
Query Start/End: Original strand, 10 - 448
Target Start/End: Original strand, 28608091 - 28608528
Alignment:
| Q |
10 |
aagaatatctaaataggcggaatccaaatcctagcattagttgctaaatatttgtgaatagatttattttggatgataaatatgtgactgtagtattaaa |
109 |
Q |
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| T |
28608091 |
aagaatatctaaataggcggaatccaaatcctagcattagttgctaaatatttgtgaattgatttattttggatgataaatatgtgatagtagtattaa- |
28608189 |
T |
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| Q |
110 |
tttggatcaaaataatattagaagcttgtgaattaatttatctaacttgatgattgacatattatgtaaactataaaagttgtttccttactcgctgtgt |
209 |
Q |
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| T |
28608190 |
tttggatcaaaataatattagaagcttgtgaattaatttatctaacttgatgattgacatattatgtaaactataaaagttgtttccttactcgctgtgt |
28608289 |
T |
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| Q |
210 |
tctaaatgaagtgtagtttagagtttttcacatagattaagaaatacaataaataagcatcgtttaaagtttttgaaatgggggagtattaaacttcaat |
309 |
Q |
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| T |
28608290 |
tctaaatgaagtgtagtttagagtttttcaaatagattaagaaatacaataaataagcatcgtttaaagtttttgaaatgggggagtattaaacttcaat |
28608389 |
T |
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| Q |
310 |
tttttctttaaaaaacataattgttggatccaagggatttaaacatagataagtcgcacttacttgtttaatgcctgaatggaatggtccactagaagca |
409 |
Q |
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| T |
28608390 |
tttttctttaaaaaacataattgttggatccaagggatttgaacatagataagtcgcacttacttgtttaatgcctgaatggaatggtccactggaagca |
28608489 |
T |
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| Q |
410 |
gctgcgtatggtacgagatacgagggcaatatcaaactg |
448 |
Q |
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| T |
28608490 |
gctgcgtatggtacgagatacgagggcaatatcaaactg |
28608528 |
T |
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