View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15699_low_16 (Length: 278)

Name: NF15699_low_16
Description: NF15699
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15699_low_16
NF15699_low_16
[»] chr4 (49 HSPs)
chr4 (15-260)||(49248123-49248369)
chr4 (236-278)||(11248941-11248983)
chr4 (236-278)||(29832736-29832778)
chr4 (236-278)||(34016813-34016855)
chr4 (236-278)||(42629775-42629817)
chr4 (236-278)||(48380619-48380661)
chr4 (230-278)||(26882763-26882811)
chr4 (239-278)||(55968590-55968629)
chr4 (239-278)||(55984307-55984346)
chr4 (240-278)||(5388208-5388246)
chr4 (236-278)||(23222517-23222559)
chr4 (236-278)||(25367437-25367479)
chr4 (236-274)||(25771175-25771213)
chr4 (236-278)||(32860812-32860854)
chr4 (236-278)||(33599977-33600019)
chr4 (239-277)||(42168326-42168364)
chr4 (236-278)||(42507729-42507771)
chr4 (236-278)||(43587711-43587753)
chr4 (236-278)||(51817137-51817179)
chr4 (229-278)||(35836091-35836140)
chr4 (238-278)||(34491876-34491916)
chr4 (236-275)||(42179645-42179684)
chr4 (240-278)||(6920653-6920691)
chr4 (240-278)||(7258102-7258140)
chr4 (236-278)||(10555289-10555331)
chr4 (236-278)||(29832481-29832523)
chr4 (240-278)||(50690611-50690649)
chr4 (240-278)||(52920777-52920815)
chr4 (235-278)||(3506055-3506098)
chr4 (239-278)||(27383627-27383666)
chr4 (239-278)||(46674909-46674948)
chr4 (236-278)||(2401270-2401312)
chr4 (236-278)||(4294122-4294164)
chr4 (236-278)||(17609171-17609213)
chr4 (236-278)||(22019136-22019178)
chr4 (236-278)||(23662572-23662614)
chr4 (236-278)||(26483180-26483222)
chr4 (240-278)||(29290304-29290342)
chr4 (236-278)||(30088791-30088833)
chr4 (236-278)||(30418750-30418792)
chr4 (236-278)||(33501367-33501409)
chr4 (236-278)||(35877036-35877078)
chr4 (236-278)||(45250116-45250158)
chr4 (231-277)||(52808859-52808905)
chr4 (236-277)||(9542559-9542600)
chr4 (236-277)||(19877799-19877840)
chr4 (249-278)||(38794012-38794041)
chr4 (238-278)||(13494151-13494191)
chr4 (230-278)||(41608818-41608866)
[»] chr1 (47 HSPs)
chr1 (230-278)||(32557937-32557985)
chr1 (236-278)||(3550034-3550076)
chr1 (236-278)||(3552753-3552795)
chr1 (236-278)||(8712071-8712113)
chr1 (236-278)||(24583875-24583917)
chr1 (236-278)||(24589544-24589586)
chr1 (236-278)||(25984421-25984463)
chr1 (236-278)||(47393575-47393617)
chr1 (226-278)||(5432357-5432409)
chr1 (239-278)||(16705343-16705382)
chr1 (239-278)||(42334451-42334490)
chr1 (236-278)||(4750393-4750435)
chr1 (236-278)||(14202978-14203020)
chr1 (236-278)||(26333477-26333519)
chr1 (240-278)||(32049526-32049564)
chr1 (240-278)||(35096662-35096700)
chr1 (236-278)||(39282578-39282620)
chr1 (236-278)||(44343837-44343879)
chr1 (240-278)||(46160388-46160426)
chr1 (236-278)||(50942667-50942709)
chr1 (238-278)||(4227794-4227834)
chr1 (238-278)||(22172622-22172662)
chr1 (238-278)||(23624890-23624930)
chr1 (230-278)||(23827370-23827418)
chr1 (240-278)||(47038505-47038543)
chr1 (239-278)||(11353609-11353648)
chr1 (239-278)||(15575057-15575096)
chr1 (239-278)||(29672352-29672391)
chr1 (239-278)||(38665104-38665143)
chr1 (236-278)||(4226285-4226327)
chr1 (236-278)||(9066367-9066409)
chr1 (236-278)||(13352497-13352539)
chr1 (236-278)||(16010962-16011004)
chr1 (236-278)||(27952652-27952694)
chr1 (240-278)||(29361437-29361475)
chr1 (236-278)||(34967524-34967566)
chr1 (240-278)||(38680077-38680115)
chr1 (236-278)||(40100531-40100573)
chr1 (236-278)||(45467249-45467291)
chr1 (236-278)||(48355797-48355839)
chr1 (236-278)||(49980460-49980502)
chr1 (236-278)||(52703415-52703457)
chr1 (238-278)||(1037654-1037694)
chr1 (238-278)||(1044560-1044600)
chr1 (238-278)||(15824309-15824349)
chr1 (238-278)||(50324875-50324915)
chr1 (238-278)||(51983953-51983993)
[»] scaffold0427 (1 HSPs)
scaffold0427 (236-278)||(5277-5319)
[»] scaffold0160 (1 HSPs)
scaffold0160 (236-278)||(25954-25996)
[»] chr8 (45 HSPs)
chr8 (236-278)||(12000526-12000568)
chr8 (236-278)||(27667514-27667556)
chr8 (236-278)||(38896652-38896694)
chr8 (239-278)||(21582915-21582954)
chr8 (236-278)||(1042416-1042458)
chr8 (236-278)||(18673414-18673456)
chr8 (236-278)||(19715273-19715315)
chr8 (240-278)||(20091169-20091207)
chr8 (236-278)||(22578251-22578293)
chr8 (236-278)||(24616562-24616604)
chr8 (236-278)||(25838666-25838708)
chr8 (236-278)||(28074455-28074497)
chr8 (236-278)||(30852020-30852062)
chr8 (236-278)||(34908726-34908768)
chr8 (236-274)||(41541177-41541215)
chr8 (240-278)||(42192419-42192457)
chr8 (240-278)||(42927165-42927203)
chr8 (237-278)||(24333055-24333096)
chr8 (238-278)||(18203212-18203252)
chr8 (230-278)||(37504995-37505043)
chr8 (230-278)||(38367632-38367680)
chr8 (236-275)||(36652480-36652519)
chr8 (236-278)||(6796146-6796188)
chr8 (236-278)||(16421906-16421948)
chr8 (236-278)||(16872553-16872595)
chr8 (240-278)||(32629787-32629825)
chr8 (236-278)||(35631073-35631115)
chr8 (236-278)||(39168983-39169025)
chr8 (239-278)||(13779765-13779804)
chr8 (240-278)||(4135737-4135775)
chr8 (240-278)||(5371590-5371628)
chr8 (236-278)||(7427363-7427405)
chr8 (236-278)||(8738019-8738061)
chr8 (236-278)||(13429114-13429156)
chr8 (236-278)||(23597307-23597349)
chr8 (236-278)||(23606229-23606271)
chr8 (240-278)||(24450567-24450605)
chr8 (236-278)||(27919619-27919661)
chr8 (236-278)||(30087921-30087963)
chr8 (236-278)||(30526203-30526245)
chr8 (236-278)||(35544186-35544228)
chr8 (236-278)||(39284242-39284284)
chr8 (238-278)||(23897728-23897768)
chr8 (238-278)||(37965030-37965070)
chr8 (230-258)||(40488145-40488173)
[»] chr7 (32 HSPs)
chr7 (236-278)||(18234931-18234973)
chr7 (236-278)||(1643699-1643741)
chr7 (236-278)||(24685621-24685663)
chr7 (236-278)||(25428225-25428267)
chr7 (236-278)||(28234334-28234376)
chr7 (236-278)||(39199092-39199134)
chr7 (236-278)||(46774155-46774197)
chr7 (238-278)||(5680395-5680435)
chr7 (238-278)||(5705447-5705487)
chr7 (244-278)||(19785776-19785810)
chr7 (240-278)||(22624364-22624402)
chr7 (236-278)||(22918219-22918261)
chr7 (236-278)||(25651180-25651222)
chr7 (239-277)||(25756393-25756431)
chr7 (236-278)||(38074547-38074589)
chr7 (236-278)||(39403893-39403935)
chr7 (236-278)||(45042020-45042062)
chr7 (241-278)||(27119041-27119078)
chr7 (239-278)||(32827813-32827852)
chr7 (239-278)||(35421808-35421847)
chr7 (239-278)||(42121950-42121989)
chr7 (236-278)||(12118813-12118855)
chr7 (236-278)||(19866470-19866512)
chr7 (236-278)||(23726569-23726611)
chr7 (236-278)||(29155687-29155729)
chr7 (236-278)||(33938408-33938450)
chr7 (236-278)||(40768670-40768712)
chr7 (236-278)||(44186928-44186970)
chr7 (236-278)||(44481032-44481074)
chr7 (236-278)||(46373196-46373238)
chr7 (238-278)||(22706957-22706997)
chr7 (238-278)||(45823152-45823192)
[»] chr6 (26 HSPs)
chr6 (236-278)||(3787138-3787180)
chr6 (236-278)||(10364663-10364705)
chr6 (236-278)||(17360645-17360687)
chr6 (239-278)||(2603589-2603628)
chr6 (236-278)||(6835758-6835800)
chr6 (236-278)||(8493591-8493633)
chr6 (236-278)||(30739345-30739387)
chr6 (236-278)||(1352517-1352559)
chr6 (240-278)||(3888612-3888650)
chr6 (240-278)||(14310960-14310998)
chr6 (236-278)||(15989782-15989824)
chr6 (236-278)||(26409093-26409135)
chr6 (236-278)||(31492926-31492968)
chr6 (236-278)||(31498315-31498357)
chr6 (239-278)||(3337430-3337469)
chr6 (236-271)||(31503702-31503737)
chr6 (236-278)||(690453-690495)
chr6 (236-278)||(4130898-4130940)
chr6 (236-278)||(9660419-9660461)
chr6 (236-278)||(11172931-11172973)
chr6 (236-278)||(11615398-11615440)
chr6 (236-278)||(30510948-30510990)
chr6 (236-278)||(32142421-32142463)
chr6 (236-278)||(35040028-35040070)
chr6 (229-278)||(6335138-6335187)
chr6 (241-278)||(12278943-12278980)
[»] chr5 (36 HSPs)
chr5 (236-278)||(7414661-7414703)
chr5 (236-278)||(29816250-29816292)
chr5 (236-278)||(34163168-34163210)
chr5 (236-278)||(34606989-34607031)
chr5 (236-278)||(14153690-14153732)
chr5 (240-278)||(25784724-25784762)
chr5 (236-278)||(34381564-34381606)
chr5 (236-278)||(34382015-34382057)
chr5 (236-278)||(36347400-36347442)
chr5 (238-278)||(13978418-13978458)
chr5 (238-278)||(39410611-39410651)
chr5 (236-276)||(39895995-39896035)
chr5 (239-278)||(35080315-35080354)
chr5 (236-278)||(4456439-4456481)
chr5 (240-278)||(4890131-4890169)
chr5 (236-278)||(18473178-18473220)
chr5 (236-278)||(20495483-20495525)
chr5 (236-278)||(28377683-28377725)
chr5 (236-278)||(37337071-37337113)
chr5 (240-278)||(40915607-40915645)
chr5 (238-275)||(1108236-1108273)
chr5 (236-277)||(3633969-3634010)
chr5 (241-278)||(12503896-12503933)
chr5 (238-278)||(39990394-39990434)
chr5 (236-274)||(1313250-1313288)
chr5 (236-278)||(6334997-6335039)
chr5 (236-278)||(12360833-12360875)
chr5 (236-278)||(15268467-15268509)
chr5 (236-278)||(22801880-22801922)
chr5 (244-278)||(29000909-29000943)
chr5 (236-278)||(32706777-32706819)
chr5 (236-278)||(42940812-42940854)
chr5 (239-268)||(32238035-32238064)
chr5 (238-278)||(8042548-8042588)
chr5 (230-278)||(9577666-9577714)
chr5 (246-278)||(21772841-21772873)
[»] chr3 (38 HSPs)
chr3 (236-278)||(21216860-21216902)
chr3 (236-278)||(42490087-42490129)
chr3 (236-278)||(48910533-48910575)
chr3 (238-278)||(5137665-5137705)
chr3 (230-278)||(27848879-27848927)
chr3 (230-278)||(54103942-54103990)
chr3 (239-278)||(8104279-8104318)
chr3 (239-278)||(24978878-24978917)
chr3 (239-278)||(40164217-40164256)
chr3 (240-278)||(2929883-2929921)
chr3 (236-278)||(28227017-28227059)
chr3 (236-278)||(28686356-28686398)
chr3 (236-278)||(30744898-30744940)
chr3 (236-278)||(31786841-31786883)
chr3 (236-278)||(38999490-38999532)
chr3 (236-278)||(40643362-40643404)
chr3 (238-278)||(52679781-52679821)
chr3 (239-278)||(27039075-27039114)
chr3 (239-278)||(32100275-32100314)
chr3 (236-278)||(240667-240709)
chr3 (236-278)||(3671574-3671616)
chr3 (240-278)||(46195821-46195859)
chr3 (240-278)||(54080304-54080342)
chr3 (239-275)||(16661466-16661502)
chr3 (236-278)||(23609427-23609469)
chr3 (236-274)||(29227368-29227406)
chr3 (236-278)||(29343248-29343290)
chr3 (236-278)||(30358764-30358806)
chr3 (236-278)||(31170430-31170472)
chr3 (236-278)||(33839994-33840036)
chr3 (240-278)||(43175784-43175822)
chr3 (236-278)||(47054042-47054084)
chr3 (236-278)||(47241208-47241250)
chr3 (236-278)||(52262270-52262312)
chr3 (236-277)||(52040444-52040485)
chr3 (238-278)||(42662652-42662692)
chr3 (230-278)||(46336736-46336784)
chr3 (238-278)||(51166476-51166516)
[»] chr2 (44 HSPs)
chr2 (236-278)||(9047432-9047474)
chr2 (236-278)||(14527795-14527837)
chr2 (236-278)||(14943457-14943499)
chr2 (236-278)||(40833514-40833556)
chr2 (238-278)||(25899048-25899088)
chr2 (230-278)||(27244926-27244974)
chr2 (239-278)||(1204961-1205000)
chr2 (231-278)||(12467670-12467717)
chr2 (240-278)||(13375361-13375399)
chr2 (236-278)||(19002951-19002993)
chr2 (236-278)||(24000318-24000360)
chr2 (236-278)||(26850016-26850058)
chr2 (236-278)||(28330790-28330832)
chr2 (236-278)||(36068150-36068192)
chr2 (236-278)||(39927684-39927726)
chr2 (236-278)||(40171731-40171773)
chr2 (238-278)||(19240808-19240848)
chr2 (238-278)||(34213175-34213215)
chr2 (238-278)||(42056084-42056124)
chr2 (239-278)||(16062577-16062616)
chr2 (240-278)||(1221232-1221270)
chr2 (236-278)||(1684330-1684372)
chr2 (236-278)||(6579746-6579788)
chr2 (240-278)||(19275135-19275173)
chr2 (236-278)||(22061025-22061067)
chr2 (240-278)||(39407826-39407864)
chr2 (236-278)||(40171937-40171979)
chr2 (240-276)||(13849460-13849496)
chr2 (230-278)||(14723832-14723880)
chr2 (239-278)||(6312266-6312305)
chr2 (239-278)||(6596515-6596554)
chr2 (239-278)||(27341780-27341819)
chr2 (236-278)||(4646586-4646628)
chr2 (240-278)||(8341674-8341712)
chr2 (236-278)||(12192452-12192494)
chr2 (236-278)||(12363666-12363708)
chr2 (236-278)||(18450123-18450165)
chr2 (230-260)||(26850069-26850099)
chr2 (236-278)||(34036144-34036186)
chr2 (226-260)||(39235229-39235263)
chr2 (236-278)||(40425154-40425196)
chr2 (236-277)||(20925892-20925933)
chr2 (230-278)||(3870796-3870844)
chr2 (236-276)||(36174554-36174594)
[»] scaffold0037 (1 HSPs)
scaffold0037 (236-278)||(98908-98950)
[»] scaffold0001 (1 HSPs)
scaffold0001 (236-278)||(524337-524379)
[»] scaffold0154 (1 HSPs)
scaffold0154 (239-278)||(4173-4212)
[»] scaffold0140 (1 HSPs)
scaffold0140 (239-278)||(18318-18357)
[»] scaffold0011 (1 HSPs)
scaffold0011 (236-278)||(63390-63432)


Alignment Details
Target: chr4 (Bit Score: 227; Significance: 1e-125; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 15 - 260
Target Start/End: Complemental strand, 49248369 - 49248123
Alignment:
Q  15 cagagaataagaacgtacaatgcatgttcaagcttgacaacatgattaatactactttgtaacattgtcaaatagaaaacatcctcaattatatattgaa 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  49248369 cagagaataagaacgtacaatgcatgttcaagcttgacaacatgattaatactactttgtaacattgtcaaatagaaaacatcctcaattatatattgaa 49248270  T
Q  115 gttgctacttctgtattatctccatccagtttcgattcttcattgtccctgcatcacaaacatgtttcaattaaagttattaaaaaattgactaattaat 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  49248269 gttgctacttctgtattatctccatccagtttcgattcttcattgtccctgcatcagaaacatgtttcaattaaagttattaaaaaattgactaattaat 49248170  T
Q  215 accatatatgttact-cctccttcccaaattgtatgtcactttagaa 260  Q
    ||||||||||||||| |||||||| ||||||||||||| ||||||||    
T  49248169 accatatatgttactccctccttcacaaattgtatgtccctttagaa 49248123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 11248983 - 11248941
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  11248983 tcccaaattgtatgtcactttagaataccaatgaaacattaat 11248941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 29832778 - 29832736
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  29832778 tcccaaattgtatgtcactttagaataccaatgaaacattaat 29832736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 34016813 - 34016855
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  34016813 tcccaaattgtatgtcactttagaataccaatgaaacattaat 34016855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 42629817 - 42629775
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  42629817 tcccaaattgtatgtcactttagaataccaatgaaacattaat 42629775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 48380619 - 48380661
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  48380619 tcccaaattgtatgtcactttagaataccaatgaaacattaat 48380661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 26882763 - 26882811
Alignment:
Q  230 cctccttcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  26882763 cctccgtcccaaattgtatgtcactttacaataccaatgaaacattaat 26882811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 278
Target Start/End: Original strand, 55968590 - 55968629
Alignment:
Q  239 caaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  55968590 caaattgtatgtcactttagaataccaatgaaacattaat 55968629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 278
Target Start/End: Complemental strand, 55984346 - 55984307
Alignment:
Q  239 caaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  55984346 caaattgtatgtcactttagaataccaatgaaacattaat 55984307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 240 - 278
Target Start/End: Original strand, 5388208 - 5388246
Alignment:
Q  240 aaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||    
T  5388208 aaattgtatgtcactttagaataccaatgaaacattaat 5388246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 23222517 - 23222559
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  23222517 tcccaaattgtatgtcactttacaataccaatgaaacattaat 23222559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 25367479 - 25367437
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  25367479 tcccaaattgtatgtcactttacaataccaatgaaacattaat 25367437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 274
Target Start/End: Complemental strand, 25771213 - 25771175
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacat 274  Q
    |||||||||||||||||||||||||||||||||||||||    
T  25771213 tcccaaattgtatgtcactttagaataccaatgaaacat 25771175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 32860854 - 32860812
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  32860854 tcccaaattgtatgtcactttacaataccaatgaaacattaat 32860812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 33600019 - 33599977
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  33600019 tcccaaattgtatgtcactttataataccaatgaaacattaat 33599977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 239 - 277
Target Start/End: Original strand, 42168326 - 42168364
Alignment:
Q  239 caaattgtatgtcactttagaataccaatgaaacattaa 277  Q
    |||||||||||||||||||||||||||||||||||||||    
T  42168326 caaattgtatgtcactttagaataccaatgaaacattaa 42168364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 42507771 - 42507729
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||| |||||||||||||||||||||||||||||    
T  42507771 tcccaaattgtatatcactttagaataccaatgaaacattaat 42507729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 43587711 - 43587753
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  43587711 tcccaaattgtatgtcactttagaatacaaatgaaacattaat 43587753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 51817179 - 51817137
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  51817179 tcccaaattgtatgtcactttagaatatcaatgaaacattaat 51817137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 229 - 278
Target Start/End: Original strand, 35836091 - 35836140
Alignment:
Q  229 tcctccttcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||| || ||||||||||||||||||| ||||||||||||||||||||    
T  35836091 tcctccgtctcaaattgtatgtcactttacaataccaatgaaacattaat 35836140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 34491916 - 34491876
Alignment:
Q  238 ccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  34491916 ccaaattgtatgtcactttagaatatcaatgaaacattaat 34491876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 236 - 275
Target Start/End: Complemental strand, 42179684 - 42179645
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacatt 275  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  42179684 tcccaaattgtatgtcactttacaataccaatgaaacatt 42179645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 278
Target Start/End: Original strand, 6920653 - 6920691
Alignment:
Q  240 aaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  6920653 aaattgtatgtcactttacaataccaatgaaacattaat 6920691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 278
Target Start/End: Complemental strand, 7258140 - 7258102
Alignment:
Q  240 aaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  7258140 aaattgtatgtcactttacaataccaatgaaacattaat 7258102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 10555331 - 10555289
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| |||| |||||||||||||||    
T  10555331 tcccaaattgtatgtcactttacaatatcaatgaaacattaat 10555289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 29832481 - 29832523
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| |||| |||||||||||||||    
T  29832481 tcccaaattgtatgtcactttacaatatcaatgaaacattaat 29832523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 278
Target Start/End: Complemental strand, 50690649 - 50690611
Alignment:
Q  240 aaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  50690649 aaattgtatgtcactttaaaataccaatgaaacattaat 50690611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 278
Target Start/End: Complemental strand, 52920815 - 52920777
Alignment:
Q  240 aaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  52920815 aaattgtatgtcactttaaaataccaatgaaacattaat 52920777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 235 - 278
Target Start/End: Original strand, 3506055 - 3506098
Alignment:
Q  235 ttcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||| |||||||||||||||||| ||||| ||||||||||||||    
T  3506055 ttcctaaattgtatgtcactttacaatacaaatgaaacattaat 3506098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 278
Target Start/End: Complemental strand, 27383666 - 27383627
Alignment:
Q  239 caaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||| ||||||||| ||||||||||    
T  27383666 caaattgtatgtcactttacaataccaataaaacattaat 27383627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 278
Target Start/End: Original strand, 46674909 - 46674948
Alignment:
Q  239 caaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||| |||||||||||| ||||||||||||||||||||    
T  46674909 caaattttatgtcactttacaataccaatgaaacattaat 46674948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 2401270 - 2401312
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||| | || ||||||||||||||||||||    
T  2401270 tcccaaattgtatgtcaatctacaataccaatgaaacattaat 2401312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 4294164 - 4294122
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||| |||||| ||||| ||||||||||||||||||||    
T  4294164 tcccaaattatatgtcgctttacaataccaatgaaacattaat 4294122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 17609213 - 17609171
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||| |||||| ||||| ||||||||||||||||||||    
T  17609213 tcccaaattatatgtcgctttacaataccaatgaaacattaat 17609171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 22019136 - 22019178
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  22019136 tcccaaattgtatgtcgctttacaataccaatgaaaaattaat 22019178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 23662572 - 23662614
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||| ||||||| ||||||    
T  23662572 tcccaaattgtatgtcactttacaatactaatgaaatattaat 23662614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 26483222 - 26483180
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  26483222 tcccaaattgtatgtcgctttataataccaatgaaaaattaat 26483180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 278
Target Start/End: Complemental strand, 29290342 - 29290304
Alignment:
Q  240 aaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||| ||||||| ||||||    
T  29290342 aaattgtatgtcactttagaatactaatgaaatattaat 29290304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 30088833 - 30088791
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  30088833 tcccaaattgtatgtcgctttacaataccaatgaaaaattaat 30088791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 30418750 - 30418792
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||| |||||| ||||||||||||||||||| ||||||    
T  30418750 tcccaaattatatgtcgctttagaataccaatgaaatattaat 30418792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 33501367 - 33501409
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||| ||||||||||| |||| |||||||||||||||    
T  33501367 tcccaaattggatgtcactttacaatatcaatgaaacattaat 33501409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 35877078 - 35877036
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||  ||||| ||||||||||||||    
T  35877078 tcccaaattgtatgtcactttccaatactaatgaaacattaat 35877036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 45250116 - 45250158
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  45250116 tcccaaattgtatgtcgctttacaataccaatgaaaaattaat 45250158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 231 - 277
Target Start/End: Original strand, 52808859 - 52808905
Alignment:
Q  231 ctccttcccaaattgtatgtcactttagaataccaatgaaacattaa 277  Q
    |||| |||||||||||| ||||||||| |||||||||| ||||||||    
T  52808859 ctccgtcccaaattgtacgtcactttacaataccaatgcaacattaa 52808905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 236 - 277
Target Start/End: Complemental strand, 9542600 - 9542559
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaa 277  Q
    ||||||||| |||||||||||  |||||||||||||||||||    
T  9542600 tcccaaattatatgtcactttgcaataccaatgaaacattaa 9542559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 236 - 277
Target Start/End: Original strand, 19877799 - 19877840
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaa 277  Q
    ||||||||| |||||| ||||| |||||||||||||||||||    
T  19877799 tcccaaattatatgtcgctttacaataccaatgaaacattaa 19877840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 249 - 278
Target Start/End: Complemental strand, 38794041 - 38794012
Alignment:
Q  249 gtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||||||||||||||    
T  38794041 gtcactttagaataccaatgaaacattaat 38794012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 13494151 - 13494191
Alignment:
Q  238 ccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||| ||||| ||||||| ||||||||||||    
T  13494151 ccaaattgtatgtctctttataataccattgaaacattaat 13494191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 41608866 - 41608818
Alignment:
Q  230 cctccttcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||| |||||||||||||||| ||||| |||||||||| ||| |||||    
T  41608866 cctccgtcccaaattgtatgtcgctttacaataccaatgcaactttaat 41608818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 1e-16; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 32557937 - 32557985
Alignment:
Q  230 cctccttcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  32557937 cctccgtcccaaattgtatgtcactttagaataccaatgaaacattaat 32557985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 3550034 - 3550076
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  3550034 tcccaaattgtatgtcactttagaataccaatgaaacattaat 3550076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 3552795 - 3552753
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  3552795 tcccaaattgtatgtcactttagaataccaatgaaacattaat 3552753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 8712113 - 8712071
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  8712113 tcccaaattgtatgtcactttagaataccaatgaaacattaat 8712071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 24583875 - 24583917
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  24583875 tcccaaattgtatgtcactttagaataccaatgaaacattaat 24583917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 24589544 - 24589586
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  24589544 tcccaaattgtatgtcactttagaataccaatgaaacattaat 24589586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 25984421 - 25984463
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  25984421 tcccaaattgtatgtcactttagaataccaatgaaacattaat 25984463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 47393617 - 47393575
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  47393617 tcccaaattgtatgtcactttagaataccaatgaaacattaat 47393575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 226 - 278
Target Start/End: Complemental strand, 5432409 - 5432357
Alignment:
Q  226 tactcctccttcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||  |||||||||||||||||||||||||||||||| ||||||||||    
T  5432409 tactcctcagtcccaaattgtatgtcactttagaataccaattaaacattaat 5432357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 278
Target Start/End: Original strand, 16705343 - 16705382
Alignment:
Q  239 caaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  16705343 caaattgtatgtcactttagaataccaatgaaacattaat 16705382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 278
Target Start/End: Complemental strand, 42334490 - 42334451
Alignment:
Q  239 caaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  42334490 caaattgtatgtcactttagaataccaatgaaacattaat 42334451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 4750435 - 4750393
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  4750435 tcccaaattgtatgtcactttacaataccaatgaaacattaat 4750393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 14202978 - 14203020
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  14202978 tcccaaattgtatgtcactttagaatatcaatgaaacattaat 14203020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 26333519 - 26333477
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||| ||||||||||||||    
T  26333519 tcccaaattgtatgtcactttagaatactaatgaaacattaat 26333477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 240 - 278
Target Start/End: Complemental strand, 32049564 - 32049526
Alignment:
Q  240 aaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||    
T  32049564 aaattgtatgtcactttagaataccaatgaaacattaat 32049526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 240 - 278
Target Start/End: Original strand, 35096662 - 35096700
Alignment:
Q  240 aaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||    
T  35096662 aaattgtatgtcactttagaataccaatgaaacattaat 35096700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 39282578 - 39282620
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  39282578 tcccaaattgtatgtcactttaaaataccaatgaaacattaat 39282620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 44343879 - 44343837
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  44343879 tcccaaattgtatgtcactttaaaataccaatgaaacattaat 44343837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 240 - 278
Target Start/End: Original strand, 46160388 - 46160426
Alignment:
Q  240 aaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||    
T  46160388 aaattgtatgtcactttagaataccaatgaaacattaat 46160426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 50942667 - 50942709
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  50942667 tcccaaattgtatgtcactttagaatatcaatgaaacattaat 50942709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 4227794 - 4227834
Alignment:
Q  238 ccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  4227794 ccaaattgtatgtcattttagaataccaatgaaacattaat 4227834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 22172662 - 22172622
Alignment:
Q  238 ccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  22172662 ccaaattgtatgtcactttagaatacaaatgaaacattaat 22172622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 23624890 - 23624930
Alignment:
Q  238 ccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  23624890 ccaaattgtatgtcactttagaatatcaatgaaacattaat 23624930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 23827370 - 23827418
Alignment:
Q  230 cctccttcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||| |||||||||||||||||||||| ||||||||||||| ||||||    
T  23827370 cctccgtcccaaattgtatgtcactttacaataccaatgaaatattaat 23827418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 278
Target Start/End: Complemental strand, 47038543 - 47038505
Alignment:
Q  240 aaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||| |||||||||||||||||||||||||    
T  47038543 aaattgtatgtcattttagaataccaatgaaacattaat 47038505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 278
Target Start/End: Original strand, 11353609 - 11353648
Alignment:
Q  239 caaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||| |||| |||||||||||||||    
T  11353609 caaattgtatgtcactttacaatatcaatgaaacattaat 11353648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 278
Target Start/End: Complemental strand, 15575096 - 15575057
Alignment:
Q  239 caaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||| ||||||| ||||||||||||||||||||    
T  15575096 caaattgtatgccactttacaataccaatgaaacattaat 15575057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 278
Target Start/End: Original strand, 29672352 - 29672391
Alignment:
Q  239 caaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||| |||| ||||||||||||||||||||    
T  29672352 caaattgtatgtcattttacaataccaatgaaacattaat 29672391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 278
Target Start/End: Original strand, 38665104 - 38665143
Alignment:
Q  239 caaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||| |||| |||||||||||||||    
T  38665104 caaattgtatgtcactttacaatatcaatgaaacattaat 38665143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 4226285 - 4226327
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||| |||||||||||| |||| |||||||||||||||    
T  4226285 tcccaaattatatgtcactttacaatatcaatgaaacattaat 4226327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 9066367 - 9066409
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  9066367 tcccaaattgtatgtcgctttacaataccaatgaaaaattaat 9066409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 13352497 - 13352539
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||| |||||| ||||| ||||||||||||||||||||    
T  13352497 tcccaaattatatgtcgctttacaataccaatgaaacattaat 13352539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 16010962 - 16011004
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  16010962 tcccaaattgtatgtcgctttacaataccaatgaaaaattaat 16011004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 27952652 - 27952694
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||| |||||| ||||| ||||||||||||||||||||    
T  27952652 tcccaaattatatgtcgctttacaataccaatgaaacattaat 27952694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 278
Target Start/End: Complemental strand, 29361475 - 29361437
Alignment:
Q  240 aaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||| |||| ||||||||||||||||||||    
T  29361475 aaattgtatgtcattttacaataccaatgaaacattaat 29361437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 34967566 - 34967524
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  34967566 tcccaaattgtatgtcgctttacaataccaatgaaaaattaat 34967524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 278
Target Start/End: Complemental strand, 38680115 - 38680077
Alignment:
Q  240 aaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||| ||||||||||||| ||||||    
T  38680115 aaattgtatgtcactttacaataccaatgaaatattaat 38680077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 40100531 - 40100573
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||| |||||||||||| ||||||||||||| ||||||    
T  40100531 tcccaaattatatgtcactttacaataccaatgaaatattaat 40100573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 45467291 - 45467249
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||| |||||| |||| |||||||||||||||    
T  45467291 tcccaaattgtatgttactttacaatatcaatgaaacattaat 45467249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 48355797 - 48355839
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| |||||| |||||||||||||    
T  48355797 tcccaaattgtatgtcgctttacaataccgatgaaacattaat 48355839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 49980502 - 49980460
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  49980502 tcccaaattgtatgtcgctttacaataccaatgaaaaattaat 49980460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 52703415 - 52703457
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| |||||||||||| |||||||    
T  52703415 tcccaaattgtatgtcgctttacaataccaatgaatcattaat 52703457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 1037694 - 1037654
Alignment:
Q  238 ccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||| ||||| ||||||||||||| ||||||    
T  1037694 ccaaattgtatgtcgctttacaataccaatgaaaaattaat 1037654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 1044600 - 1044560
Alignment:
Q  238 ccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||| ||||| ||||||||||||| ||||||    
T  1044600 ccaaattgtatgtcgctttacaataccaatgaaaaattaat 1044560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 15824349 - 15824309
Alignment:
Q  238 ccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||| ||||| ||||| ||||||||||||||    
T  15824349 ccaaattgtatgtcgctttacaatactaatgaaacattaat 15824309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 50324875 - 50324915
Alignment:
Q  238 ccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||| ||||| ||||||||||||| ||||||    
T  50324875 ccaaattgtatgtcgctttacaataccaatgaaaaattaat 50324915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 51983993 - 51983953
Alignment:
Q  238 ccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||| ||||| ||||||||||||| ||||||    
T  51983993 ccaaattgtatgtcgctttacaataccaatgaaaaattaat 51983953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0427 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 5277 - 5319
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  5277 tcccaaattgtatgtcactttagaataccaatgaaacattaat 5319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 25996 - 25954
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  25996 tcccaaattgtatgtcactttagaataccaatgaaacattaat 25954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 45)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 12000526 - 12000568
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  12000526 tcccaaattgtatgtcactttagaataccaatgaaacattaat 12000568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 27667514 - 27667556
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  27667514 tcccaaattgtatgtcactttagaataccaatgaaacattaat 27667556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 38896694 - 38896652
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  38896694 tcccaaattgtatgtcactttagaataccaatgaaacattaat 38896652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 278
Target Start/End: Complemental strand, 21582954 - 21582915
Alignment:
Q  239 caaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  21582954 caaattgtatgtcactttagaataccaatgaaacattaat 21582915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 1042416 - 1042458
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  1042416 tcccaaattgtatgtcactttagaatatcaatgaaacattaat 1042458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 18673414 - 18673456
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  18673414 tcccaaattatatgtcactttagaataccaatgaaacattaat 18673456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 19715273 - 19715315
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  19715273 tcccaaattgtatgtcactttacaataccaatgaaacattaat 19715315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 240 - 278
Target Start/End: Complemental strand, 20091207 - 20091169
Alignment:
Q  240 aaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||    
T  20091207 aaattgtatgtcactttagaataccaatgaaacattaat 20091169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 22578251 - 22578293
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  22578251 tcccaaattatatgtcactttagaataccaatgaaacattaat 22578293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 24616562 - 24616604
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  24616562 tcccaaattgtatgtcactttacaataccaatgaaacattaat 24616604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 25838708 - 25838666
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  25838708 tcccaaattgtatgtcactttacaataccaatgaaacattaat 25838666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 28074497 - 28074455
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  28074497 tcccaaattgtatgtcactttacaataccaatgaaacattaat 28074455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 30852020 - 30852062
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  30852020 tcccaaattgtatgtcactttacaataccaatgaaacattaat 30852062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 34908726 - 34908768
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  34908726 tcccaaattgtatgtcactttagaataccaatgaaatattaat 34908768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 274
Target Start/End: Complemental strand, 41541215 - 41541177
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacat 274  Q
    |||||||||||||||||||||||||||||||||||||||    
T  41541215 tcccaaattgtatgtcactttagaataccaatgaaacat 41541177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 240 - 278
Target Start/End: Complemental strand, 42192457 - 42192419
Alignment:
Q  240 aaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||    
T  42192457 aaattgtatgtcactttagaataccaatgaaacattaat 42192419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 240 - 278
Target Start/End: Original strand, 42927165 - 42927203
Alignment:
Q  240 aaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||    
T  42927165 aaattgtatgtcactttagaataccaatgaaacattaat 42927203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 237 - 278
Target Start/End: Original strand, 24333055 - 24333096
Alignment:
Q  237 cccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||||| ||||||||||||||||||||    
T  24333055 cccaaattgtatgtcactttacaataccaatgaaacattaat 24333096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 18203252 - 18203212
Alignment:
Q  238 ccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  18203252 ccaaattgtatgtcactttacaataccaatgaaacattaat 18203212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 37504995 - 37505043
Alignment:
Q  230 cctccttcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||| |||||||||||||||||||||| |||| |||||||||||||||    
T  37504995 cctccgtcccaaattgtatgtcactttataatatcaatgaaacattaat 37505043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 38367680 - 38367632
Alignment:
Q  230 cctccttcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||| ||| ||||||||||||||||||||||| |||||||||||||||    
T  38367680 cctccgtcctaaattgtatgtcactttagaatatcaatgaaacattaat 38367632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 236 - 275
Target Start/End: Original strand, 36652480 - 36652519
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacatt 275  Q
    |||||||||||||||||||||| |||||||||||||||||    
T  36652480 tcccaaattgtatgtcactttacaataccaatgaaacatt 36652519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 6796146 - 6796188
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||||||||||| ||||||    
T  6796146 tcccaaattgtatgtcactttacaataccaatgaaatattaat 6796188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 16421906 - 16421948
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| |||||||||||| |||||||    
T  16421906 tcccaaattgtatgtcactttacaataccaatgaatcattaat 16421948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 16872595 - 16872553
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||||||||||| ||||||    
T  16872595 tcccaaattgtatgtcactttacaataccaatgaaatattaat 16872553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 278
Target Start/End: Complemental strand, 32629825 - 32629787
Alignment:
Q  240 aaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||| ||||||||||    
T  32629825 aaattgtatgtcactttagaataccaataaaacattaat 32629787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 35631073 - 35631115
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||| ||||||||||||||||| |||||||||||||||    
T  35631073 tcccaaattatatgtcactttagaatatcaatgaaacattaat 35631115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 39169025 - 39168983
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||||||||||| ||||||    
T  39169025 tcccaaattgtatgtcactttacaataccaatgaaaaattaat 39168983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 278
Target Start/End: Complemental strand, 13779804 - 13779765
Alignment:
Q  239 caaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||| |||| |||||||||||||||    
T  13779804 caaattgtatgtcactttacaatatcaatgaaacattaat 13779765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 278
Target Start/End: Original strand, 4135737 - 4135775
Alignment:
Q  240 aaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||| ||||||| ||||||||||||    
T  4135737 aaattgtatgtcactttacaataccagtgaaacattaat 4135775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 278
Target Start/End: Original strand, 5371590 - 5371628
Alignment:
Q  240 aaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||| ||||||||| ||||||||||    
T  5371590 aaattgtatgtcactttacaataccaataaaacattaat 5371628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 7427405 - 7427363
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  7427405 tcccaaattgtatgtcgctttacaataccaatgaaaaattaat 7427363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 8738019 - 8738061
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| |||||||||||| |||||||    
T  8738019 tcccaaattgtatgtcgctttacaataccaatgaatcattaat 8738061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 13429114 - 13429156
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||| |||||| ||||| ||||||||||||||||||||    
T  13429114 tcccaaattatatgtcgctttacaataccaatgaaacattaat 13429156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 23597307 - 23597349
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  23597307 tcccaaattgtatgtcgctttacaataccaatgaaaaattaat 23597349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 23606229 - 23606271
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  23606229 tcccaaattgtatgtcgctttacaataccaatgaaaaattaat 23606271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 278
Target Start/End: Original strand, 24450567 - 24450605
Alignment:
Q  240 aaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||| |||| |||||||||||||||    
T  24450567 aaattgtatgtcactttacaatatcaatgaaacattaat 24450605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 27919661 - 27919619
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| |||||||||||| |||||||    
T  27919661 tcccaaattgtatgtcgctttacaataccaatgaatcattaat 27919619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 30087963 - 30087921
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  30087963 tcccaaattgtatgtcgctttacaataccaatgaaaaattaat 30087921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 30526203 - 30526245
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  30526203 tcccaaattgtatgtcgctttacaataccaatgaaaaattaat 30526245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 35544228 - 35544186
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  35544228 tcccaaattgtatgtcgctttacaataccaatgaaaaattaat 35544186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 39284242 - 39284284
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  39284242 tcccaaattgtatgtcgctttacaataccaatgaaaaattaat 39284284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 23897728 - 23897768
Alignment:
Q  238 ccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||| |||||||||||| ||||||||||||| ||||||    
T  23897728 ccaaattatatgtcactttacaataccaatgaaatattaat 23897768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 37965070 - 37965030
Alignment:
Q  238 ccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||| |||||||| ||||| ||||||||||||||    
T  37965070 ccaaattgtatatcactttacaatactaatgaaacattaat 37965030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 258
Target Start/End: Original strand, 40488145 - 40488173
Alignment:
Q  230 cctccttcccaaattgtatgtcactttag 258  Q
    |||||||||||||||||||||||||||||    
T  40488145 cctccttcccaaattgtatgtcactttag 40488173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 18234931 - 18234973
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  18234931 tcccaaattgtatgtcactttagaataccaatgaaacattaat 18234973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 1643741 - 1643699
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  1643741 tcccaaattgtatgtcactttacaataccaatgaaacattaat 1643699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 24685663 - 24685621
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  24685663 tcccaaattgtatgtcactttacaataccaatgaaacattaat 24685621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 25428225 - 25428267
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  25428225 tcccaaattgtatgtcactttataataccaatgaaacattaat 25428267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 28234376 - 28234334
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  28234376 tcccaaattatatgtcactttagaataccaatgaaacattaat 28234334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 39199092 - 39199134
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  39199092 tcccaaattgtatgtcactttacaataccaatgaaacattaat 39199134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 46774155 - 46774197
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  46774155 tcccaaattgtatgtcactttacaataccaatgaaacattaat 46774197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 5680435 - 5680395
Alignment:
Q  238 ccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  5680435 ccaaattgtatgtcactttacaataccaatgaaacattaat 5680395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 5705487 - 5705447
Alignment:
Q  238 ccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  5705487 ccaaattgtatgtcactttacaataccaatgaaacattaat 5705447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 278
Target Start/End: Complemental strand, 19785810 - 19785776
Alignment:
Q  244 tgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||    
T  19785810 tgtatgtcactttagaataccaatgaaacattaat 19785776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 278
Target Start/End: Original strand, 22624364 - 22624402
Alignment:
Q  240 aaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  22624364 aaattgtatgtcactttagaatatcaatgaaacattaat 22624402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 22918219 - 22918261
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||| |||||||||||| ||||||||||||||||||||    
T  22918219 tcccaaattatatgtcactttataataccaatgaaacattaat 22918261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 25651222 - 25651180
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||  ||||||||||||||||||||    
T  25651222 tcccaaattgtatgtcactttgcaataccaatgaaacattaat 25651180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 239 - 277
Target Start/End: Original strand, 25756393 - 25756431
Alignment:
Q  239 caaattgtatgtcactttagaataccaatgaaacattaa 277  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  25756393 caaattgtatgtcactttacaataccaatgaaacattaa 25756431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 38074547 - 38074589
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| ||||||||||||||||||||    
T  38074547 tcccaaattgtatgtcgctttacaataccaatgaaacattaat 38074589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 39403935 - 39403893
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||||||| ||||||||||    
T  39403935 tcccaaattgtatgtcactttacaataccaataaaacattaat 39403893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 45042020 - 45042062
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| |||||||||||||||||| |||||||    
T  45042020 tcccaaattgtatgtcgctttagaataccaatgaatcattaat 45042062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 241 - 278
Target Start/End: Complemental strand, 27119078 - 27119041
Alignment:
Q  241 aattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||| ||||||||||||||||||||    
T  27119078 aattgtatgtcactttacaataccaatgaaacattaat 27119041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 278
Target Start/End: Complemental strand, 32827852 - 32827813
Alignment:
Q  239 caaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||| ||||| ||||||||||||||||||||    
T  32827852 caaattgtatgtcgctttacaataccaatgaaacattaat 32827813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 278
Target Start/End: Complemental strand, 35421847 - 35421808
Alignment:
Q  239 caaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||| ||||||||||||| ||||||    
T  35421847 caaattgtatgtcactttacaataccaatgaaaaattaat 35421808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 278
Target Start/End: Original strand, 42121950 - 42121989
Alignment:
Q  239 caaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||| |||||||||||| ||||||||||||||||||||    
T  42121950 caaattatatgtcactttacaataccaatgaaacattaat 42121989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 12118855 - 12118813
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||| ||||||||| |||||||||||||||||| ||||||    
T  12118855 tcccaaactgtatgtcattttagaataccaatgaaatattaat 12118813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 19866512 - 19866470
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| |||||||||||| |||||||    
T  19866512 tcccaaattgtatgtcgctttacaataccaatgaatcattaat 19866470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 23726611 - 23726569
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  23726611 tcccaaattgtatgtcgctttacaataccaatgaaaaattaat 23726569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 29155729 - 29155687
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  29155729 tcccaaattgtatgtcgctttacaataccaatgaaaaattaat 29155687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 33938450 - 33938408
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  33938450 tcccaaattgtatgtcgctttacaataccaatgaaaaattaat 33938408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 40768712 - 40768670
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  40768712 tcccaaattgtatgtcgctttacaataccaatgaaaaattaat 40768670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 44186928 - 44186970
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  44186928 tcccaaattgtatgtcgctttacaataccaatgaaaaattaat 44186970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 44481032 - 44481074
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  44481032 tcccaaattgtatgtcgctttacaataccaatgaaaaattaat 44481074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 46373238 - 46373196
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  46373238 tcccaaattgtatgtcgctttacaataccaatgaaaaattaat 46373196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 22706997 - 22706957
Alignment:
Q  238 ccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||| ||||| |||||||||||| |||||||    
T  22706997 ccaaattgtatgtcgctttacaataccaatgaatcattaat 22706957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 45823192 - 45823152
Alignment:
Q  238 ccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||| ||||| ||||||||||||| ||||||    
T  45823192 ccaaattgtatgtcgctttacaataccaatgaaaaattaat 45823152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 3787138 - 3787180
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  3787138 tcccaaattgtatgtcactttagaataccaatgaaacattaat 3787180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 10364705 - 10364663
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  10364705 tcccaaattgtatgtcactttagaataccaatgaaacattaat 10364663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 17360645 - 17360687
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  17360645 tcccaaattgtatgtcactttagaataccaatgaaacattaat 17360687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 278
Target Start/End: Complemental strand, 2603628 - 2603589
Alignment:
Q  239 caaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  2603628 caaattgtatgtcactttagaataccaatgaaacattaat 2603589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 6835758 - 6835800
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||| ||||||    
T  6835758 tcccaaattgtatgtcactttagaataccaatgaaatattaat 6835800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 8493633 - 8493591
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  8493633 tcccaaattgtatgtcactttagaatatcaatgaaacattaat 8493591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 30739387 - 30739345
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||| ||||||||    
T  30739387 tcccaaattgtatgtcactttagaataccaatgatacattaat 30739345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 1352517 - 1352559
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| ||||||||||||||||||||    
T  1352517 tcccaaattgtatgtcgctttacaataccaatgaaacattaat 1352559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 278
Target Start/End: Original strand, 3888612 - 3888650
Alignment:
Q  240 aaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  3888612 aaattgtatgtcactttacaataccaatgaaacattaat 3888650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 278
Target Start/End: Complemental strand, 14310998 - 14310960
Alignment:
Q  240 aaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  14310998 aaattgtatgtcactttagaatatcaatgaaacattaat 14310960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 15989824 - 15989782
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||| |||| ||||||||||||||||||||    
T  15989824 tcccaaattgtatgtcattttacaataccaatgaaacattaat 15989782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 26409093 - 26409135
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| | ||||||||||||||||||    
T  26409093 tcccaaattgtatgtcactttacattaccaatgaaacattaat 26409135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 31492926 - 31492968
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||||||||||| ||||||    
T  31492926 tcccaaattgtatgtcactttacaataccaatgaaatattaat 31492968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 31498315 - 31498357
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||||||||||| ||||||    
T  31498315 tcccaaattgtatgtcactttacaataccaatgaaatattaat 31498357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 278
Target Start/End: Original strand, 3337430 - 3337469
Alignment:
Q  239 caaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||| |||| |||||||||||||||    
T  3337430 caaattgtatgtcactttacaatatcaatgaaacattaat 3337469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 236 - 271
Target Start/End: Original strand, 31503702 - 31503737
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaa 271  Q
    |||||||||||||||||||||| |||||||||||||    
T  31503702 tcccaaattgtatgtcactttacaataccaatgaaa 31503737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 690495 - 690453
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||| ||||| |||||| ||||||||||||||||||||    
T  690495 tcccaaattatatgttactttataataccaatgaaacattaat 690453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 4130898 - 4130940
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||  |||| ||||||||||||||||||||    
T  4130898 tcccaaattgtatgtcgttttacaataccaatgaaacattaat 4130940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 9660461 - 9660419
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||| |||||| ||||| ||||||||||||||||||||    
T  9660461 tcccaaattatatgtcgctttacaataccaatgaaacattaat 9660419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 11172931 - 11172973
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  11172931 tcccaaattgtatgtcgctttacaataccaatgaaaaattaat 11172973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 11615398 - 11615440
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  11615398 tcccaaattgtatgtcgctttacaataccaatgaaaaattaat 11615440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 30510990 - 30510948
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| |||||||||||| |||||||    
T  30510990 tcccaaattgtatgtcgctttacaataccaatgaatcattaat 30510948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 32142421 - 32142463
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  32142421 tcccaaattgtatgtcgctttacaataccaatgaaaaattaat 32142463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 35040070 - 35040028
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| |||||||||||| |||||||    
T  35040070 tcccaaattgtatgtcgctttacaataccaatgaatcattaat 35040028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 229 - 278
Target Start/End: Complemental strand, 6335187 - 6335138
Alignment:
Q  229 tcctccttcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||| |||||||||||||||| ||||| |||||||||| ||| |||||    
T  6335187 tcctccgtcccaaattgtatgtcgctttacaataccaatgcaactttaat 6335138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 241 - 278
Target Start/End: Complemental strand, 12278980 - 12278943
Alignment:
Q  241 aattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||| |||||||| ||||||||||||||||||||    
T  12278980 aattgtatctcactttacaataccaatgaaacattaat 12278943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 36)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 7414661 - 7414703
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  7414661 tcccaaattgtatgtcactttagaataccaatgaaacattaat 7414703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 29816250 - 29816292
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  29816250 tcccaaattgtatgtcactttagaataccaatgaaacattaat 29816292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 34163168 - 34163210
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  34163168 tcccaaattgtatgtcactttagaataccaatgaaacattaat 34163210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 34607031 - 34606989
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  34607031 tcccaaattgtatgtcactttagaataccaatgaaacattaat 34606989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 14153732 - 14153690
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  14153732 tcccaaattgtatgtcactttaaaataccaatgaaacattaat 14153690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 240 - 278
Target Start/End: Complemental strand, 25784762 - 25784724
Alignment:
Q  240 aaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||    
T  25784762 aaattgtatgtcactttagaataccaatgaaacattaat 25784724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 34381606 - 34381564
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  34381606 tcccaaattgtatgtcactttacaataccaatgaaacattaat 34381564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 34382057 - 34382015
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  34382057 tcccaaattgtatgtcactttaaaataccaatgaaacattaat 34382015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 36347442 - 36347400
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  36347442 tcccaaattgtacgtcactttagaataccaatgaaacattaat 36347400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 13978458 - 13978418
Alignment:
Q  238 ccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  13978458 ccaaattgtatgtcactttacaataccaatgaaacattaat 13978418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 39410651 - 39410611
Alignment:
Q  238 ccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  39410651 ccaaattgtatgtcactttagaatactaatgaaacattaat 39410611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 236 - 276
Target Start/End: Complemental strand, 39896035 - 39895995
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacatta 276  Q
    ||||||||||||||||||||||||||| |||||||||||||    
T  39896035 tcccaaattgtatgtcactttagaatatcaatgaaacatta 39895995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 278
Target Start/End: Original strand, 35080315 - 35080354
Alignment:
Q  239 caaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||| |||||||||||||||||||||||||    
T  35080315 caaattgtatgtcattttagaataccaatgaaacattaat 35080354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 4456439 - 4456481
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||| |||||||||||| ||||||||||||||||||||    
T  4456439 tcccaaattatatgtcactttacaataccaatgaaacattaat 4456481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 278
Target Start/End: Complemental strand, 4890169 - 4890131
Alignment:
Q  240 aaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  4890169 aaattgtatgtcactttacaataccaatgaaacattaat 4890131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 18473220 - 18473178
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||| |||||||| ||||||||||||||||||||    
T  18473220 tcccaaattgtatttcactttacaataccaatgaaacattaat 18473178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 20495483 - 20495525
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||| |||||||||||||||||||||| ||||||||||    
T  20495483 tcccaaattatatgtcactttagaataccaataaaacattaat 20495525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 28377683 - 28377725
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||||||  |||||||||||||||||||    
T  28377683 tcccaaattgtatgtcactttacgataccaatgaaacattaat 28377725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 37337071 - 37337113
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||| ||||||||||||||    
T  37337071 tcccaaattgtatgtcactttacaatacaaatgaaacattaat 37337113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 278
Target Start/End: Complemental strand, 40915645 - 40915607
Alignment:
Q  240 aaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||| ||||||||||||||    
T  40915645 aaattgtatgtcactttagaatactaatgaaacattaat 40915607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 238 - 275
Target Start/End: Original strand, 1108236 - 1108273
Alignment:
Q  238 ccaaattgtatgtcactttagaataccaatgaaacatt 275  Q
    ||||||||||||||||||||||||| ||||||||||||    
T  1108236 ccaaattgtatgtcactttagaatatcaatgaaacatt 1108273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 236 - 277
Target Start/End: Original strand, 3633969 - 3634010
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaa 277  Q
    |||||||||||||||||||||| ||||| |||||||||||||    
T  3633969 tcccaaattgtatgtcactttacaatactaatgaaacattaa 3634010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 241 - 278
Target Start/End: Original strand, 12503896 - 12503933
Alignment:
Q  241 aattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| |||||||||||||||||||||    
T  12503896 aattgtatgtcacttttgaataccaatgaaacattaat 12503933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 39990434 - 39990394
Alignment:
Q  238 ccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||| |||| |||||||||||||||    
T  39990434 ccaaattgtatgtcactttacaatatcaatgaaacattaat 39990394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 274
Target Start/End: Original strand, 1313250 - 1313288
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacat 274  Q
    |||||||||||| ||||||||| ||||||||||||||||    
T  1313250 tcccaaattgtaagtcactttacaataccaatgaaacat 1313288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 6334997 - 6335039
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||| ||||| |||||| ||||||||||||||||||||    
T  6334997 tcccaaattatatgttactttacaataccaatgaaacattaat 6335039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 12360833 - 12360875
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  12360833 tcccaaattgtatgtcgctttacaataccaatgaaaaattaat 12360875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 15268509 - 15268467
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||| |||||| ||||| ||||||||||||||||||||    
T  15268509 tcccaaattatatgtcgctttacaataccaatgaaacattaat 15268467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 22801922 - 22801880
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||| |||||||||||| ||||||||||||| ||||||    
T  22801922 tcccaaattatatgtcactttataataccaatgaaatattaat 22801880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 244 - 278
Target Start/End: Complemental strand, 29000943 - 29000909
Alignment:
Q  244 tgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||||||||| |||||||||    
T  29000943 tgtatgtcactttagaataccaatggaacattaat 29000909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 32706777 - 32706819
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||| |||||| ||||||||||||||||||| ||||||    
T  32706777 tcccaaattatatgtcgctttagaataccaatgaaatattaat 32706819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 42940812 - 42940854
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  42940812 tcccaaattgtatgtcgctttacaataccaatgaaaaattaat 42940854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 239 - 268
Target Start/End: Complemental strand, 32238064 - 32238035
Alignment:
Q  239 caaattgtatgtcactttagaataccaatg 268  Q
    ||||||||||||||||||||||||||||||    
T  32238064 caaattgtatgtcactttagaataccaatg 32238035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 8042588 - 8042548
Alignment:
Q  238 ccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||| ||||| ||||||||||||| ||||||    
T  8042588 ccaaattgtatgtcgctttacaataccaatgaaaaattaat 8042548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 9577714 - 9577666
Alignment:
Q  230 cctccttcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||| ||||||||| |||||| ||||| ||||||||||||| ||||||    
T  9577714 cctccgtcccaaattatatgtcgctttacaataccaatgaaatattaat 9577666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 246 - 278
Target Start/End: Complemental strand, 21772873 - 21772841
Alignment:
Q  246 tatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||| ||||||||||||||||||||    
T  21772873 tatgtcactttacaataccaatgaaacattaat 21772841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 38)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 21216902 - 21216860
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  21216902 tcccaaattgtatgtcactttagaataccaatgaaacattaat 21216860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 42490087 - 42490129
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  42490087 tcccaaattgtatgtcactttagaataccaatgaaacattaat 42490129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 48910575 - 48910533
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  48910575 tcccaaattgtatgtcactttagaataccaatgaaacattaat 48910533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 5137705 - 5137665
Alignment:
Q  238 ccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  5137705 ccaaattgtatgtcactttagaataccaatgaaacattaat 5137665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 27848927 - 27848879
Alignment:
Q  230 cctccttcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  27848927 cctccgtcccaaattgtatgtcactttagaataccaataaaacattaat 27848879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 278
Target Start/End: Complemental strand, 54103990 - 54103942
Alignment:
Q  230 cctccttcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||| |||||||||||||||||||||| ||||||||||||||||||||    
T  54103990 cctccgtcccaaattgtatgtcactttacaataccaatgaaacattaat 54103942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 278
Target Start/End: Original strand, 8104279 - 8104318
Alignment:
Q  239 caaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  8104279 caaattgtatgtcactttagaataccaatgaaacattaat 8104318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 278
Target Start/End: Original strand, 24978878 - 24978917
Alignment:
Q  239 caaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  24978878 caaattgtatgtcactttagaataccaatgaaacattaat 24978917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 278
Target Start/End: Complemental strand, 40164256 - 40164217
Alignment:
Q  239 caaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  40164256 caaattgtatgtcactttagaataccaatgaaacattaat 40164217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 240 - 278
Target Start/End: Complemental strand, 2929921 - 2929883
Alignment:
Q  240 aaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||    
T  2929921 aaattgtatgtcactttagaataccaatgaaacattaat 2929883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 28227017 - 28227059
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  28227017 tcccaaattgtatgtcactttaggataccaatgaaacattaat 28227059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 28686398 - 28686356
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  28686398 tcccaaattgtacgtcactttagaataccaatgaaacattaat 28686356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 30744898 - 30744940
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  30744898 tcccaaattgtatgtcactttacaataccaatgaaacattaat 30744940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 31786841 - 31786883
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  31786841 tcccaaattgtatgtcactttacaataccaatgaaacattaat 31786883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 38999490 - 38999532
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  38999490 tcccaaattgtatgtcactttagaatatcaatgaaacattaat 38999532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 40643362 - 40643404
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||| ||||||||||    
T  40643362 tcccaaattgtatgtcactttagaataccaataaaacattaat 40643404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 52679821 - 52679781
Alignment:
Q  238 ccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  52679821 ccaaattgtatgtcactttacaataccaatgaaacattaat 52679781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 278
Target Start/End: Complemental strand, 27039114 - 27039075
Alignment:
Q  239 caaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||| ||||||||||||||||||||    
T  27039114 caaattgtatgtcactttacaataccaatgaaacattaat 27039075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 278
Target Start/End: Complemental strand, 32100314 - 32100275
Alignment:
Q  239 caaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||| ||||||||||||||||||||||||||||||    
T  32100314 caaattgtacgtcactttagaataccaatgaaacattaat 32100275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 240709 - 240667
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||| ||||||||||||||    
T  240709 tcccaaattgtatgtcactttacaatactaatgaaacattaat 240667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 3671616 - 3671574
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||| ||| ||||||||||||||||||||    
T  3671616 tcccaaattgtatgtcacgttacaataccaatgaaacattaat 3671574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 278
Target Start/End: Complemental strand, 46195859 - 46195821
Alignment:
Q  240 aaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||| |||||||||||||||||||||||||||||||||    
T  46195859 aaattatatgtcactttagaataccaatgaaacattaat 46195821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 278
Target Start/End: Complemental strand, 54080342 - 54080304
Alignment:
Q  240 aaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  54080342 aaattgtatatcactttagaataccaatgaaacattaat 54080304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 239 - 275
Target Start/End: Complemental strand, 16661502 - 16661466
Alignment:
Q  239 caaattgtatgtcactttagaataccaatgaaacatt 275  Q
    ||||||||||||||||||| |||||||||||||||||    
T  16661502 caaattgtatgtcactttacaataccaatgaaacatt 16661466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 23609469 - 23609427
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  23609469 tcccaaattgtatgtcgctttacaataccaatgaaaaattaat 23609427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 274
Target Start/End: Complemental strand, 29227406 - 29227368
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacat 274  Q
    |||||||||||||||||||||| |||| |||||||||||    
T  29227406 tcccaaattgtatgtcactttacaatatcaatgaaacat 29227368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 29343248 - 29343290
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  29343248 tcccaaattgtatgtcgctttataataccaatgaaaaattaat 29343290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 30358764 - 30358806
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  30358764 tcccaaattgtatgtcgctttacaataccaatgaaaaattaat 30358806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 31170430 - 31170472
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| |||||||||||| |||||||    
T  31170430 tcccaaattgtatgtcgctttacaataccaatgaatcattaat 31170472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 33840036 - 33839994
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  33840036 tcccaaattgtatgtcgctttacaataccaatgaaaaattaat 33839994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 278
Target Start/End: Original strand, 43175784 - 43175822
Alignment:
Q  240 aaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||| ||||||||||||||||| |||||||||||||||    
T  43175784 aaattatatgtcactttagaatatcaatgaaacattaat 43175822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 47054042 - 47054084
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  47054042 tcccaaattgtatgtcgctttacaataccaatgaaaaattaat 47054084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 47241208 - 47241250
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||| ||||||| |||| |||||||||||||||    
T  47241208 tcccaaattgtatgccactttacaatatcaatgaaacattaat 47241250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 52262270 - 52262312
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||| || ||||||||| ||||||||||||||||||||    
T  52262270 tcccaaattatacgtcactttacaataccaatgaaacattaat 52262312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 236 - 277
Target Start/End: Complemental strand, 52040485 - 52040444
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaa 277  Q
    |||||||||||||||| ||||| ||||||||||||| |||||    
T  52040485 tcccaaattgtatgtcgctttacaataccaatgaaaaattaa 52040444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 42662692 - 42662652
Alignment:
Q  238 ccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||| ||||| |||||||||||| |||||||    
T  42662692 ccaaattgtatgtcgctttacaataccaatgaatcattaat 42662652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 46336736 - 46336784
Alignment:
Q  230 cctccttcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||| |||||||||||||||| ||||| |||||||||| ||| |||||    
T  46336736 cctccgtcccaaattgtatgtcgctttacaataccaatgcaactttaat 46336784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 51166516 - 51166476
Alignment:
Q  238 ccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||| |||||| ||||| ||||||||||||||||||||    
T  51166516 ccaaattatatgtcgctttacaataccaatgaaacattaat 51166476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 9047474 - 9047432
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  9047474 tcccaaattgtatgtcactttagaataccaatgaaacattaat 9047432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 14527795 - 14527837
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  14527795 tcccaaattgtatgtcactttagaataccaatgaaacattaat 14527837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 14943499 - 14943457
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  14943499 tcccaaattgtatgtcactttagaataccaatgaaacattaat 14943457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 40833514 - 40833556
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||||||    
T  40833514 tcccaaattgtatgtcactttagaataccaatgaaacattaat 40833556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 25899048 - 25899088
Alignment:
Q  238 ccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||||    
T  25899048 ccaaattgtatgtcactttagaataccaatgaaacattaat 25899088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 27244926 - 27244974
Alignment:
Q  230 cctccttcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||| ||||||||||||||||||||| |||||||||||||||||||||    
T  27244926 cctccgtcccaaattgtatgtcacttttgaataccaatgaaacattaat 27244974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 239 - 278
Target Start/End: Original strand, 1204961 - 1205000
Alignment:
Q  239 caaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  1204961 caaattgtatgtcactttagaataccaatgaaacattaat 1205000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 231 - 278
Target Start/End: Original strand, 12467670 - 12467717
Alignment:
Q  231 ctccttcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||| ||||||||||||||||||| |||||||||||||||||||||||    
T  12467670 ctccgtcccaaattgtatgtcactctagaataccaatgaaacattaat 12467717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 240 - 278
Target Start/End: Original strand, 13375361 - 13375399
Alignment:
Q  240 aaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||||    
T  13375361 aaattgtatgtcactttagaataccaatgaaacattaat 13375399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 19002951 - 19002993
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  19002951 tcccaaattgtatgtcacattagaataccaatgaaacattaat 19002993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 24000360 - 24000318
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  24000360 tcccaaattgtatgtcactttacaataccaatgaaacattaat 24000318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 26850058 - 26850016
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  26850058 tcccaaattgtatgtcactttacaataccaatgaaacattaat 26850016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 28330790 - 28330832
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  28330790 tcccaaattgtatgtcactttacaataccaatgaaacattaat 28330832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 36068150 - 36068192
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||||||||||| |||||||||||||||    
T  36068150 tcccaaattgtatgtcactttagaatatcaatgaaacattaat 36068192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 39927726 - 39927684
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  39927726 tcccaaattgtatgtcactttacaataccaatgaaacattaat 39927684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 40171773 - 40171731
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||||||||||||||||||    
T  40171773 tcccaaattgtatgtcactttacaataccaatgaaacattaat 40171731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 238 - 278
Target Start/End: Complemental strand, 19240848 - 19240808
Alignment:
Q  238 ccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  19240848 ccaaattgtatgtcactttacaataccaatgaaacattaat 19240808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 34213175 - 34213215
Alignment:
Q  238 ccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  34213175 ccaaattgtatgtcactttacaataccaatgaaacattaat 34213215  T

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Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 238 - 278
Target Start/End: Original strand, 42056084 - 42056124
Alignment:
Q  238 ccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||| |||||||||||||||||||||||||||||||||    
T  42056084 ccaaattatatgtcactttagaataccaatgaaacattaat 42056124  T

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Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 239 - 278
Target Start/End: Original strand, 16062577 - 16062616
Alignment:
Q  239 caaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  16062577 caaattgtatgtcactgtagaataccaatgaaacattaat 16062616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 278
Target Start/End: Complemental strand, 1221270 - 1221232
Alignment:
Q  240 aaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  1221270 aaattgtatgtcactttacaataccaatgaaacattaat 1221232  T

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Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 1684372 - 1684330
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||| |||| ||||||||||||||||||||    
T  1684372 tcccaaattgtatgtcattttacaataccaatgaaacattaat 1684330  T

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Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 6579746 - 6579788
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||||||||||| |||| ||||||||||    
T  6579746 tcccaaattgtatgtcactttagaatatcaataaaacattaat 6579788  T

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Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 278
Target Start/End: Complemental strand, 19275173 - 19275135
Alignment:
Q  240 aaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  19275173 aaattgtatgtcactttacaataccaatgaaacattaat 19275135  T

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Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 22061025 - 22061067
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||| |||||||||||| ||||||||||||||||||||    
T  22061025 tcccaaattatatgtcactttacaataccaatgaaacattaat 22061067  T

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Target: chr2; HSP #26
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 240 - 278
Target Start/End: Original strand, 39407826 - 39407864
Alignment:
Q  240 aaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  39407826 aaattgtatgtcactttagaataccactgaaacattaat 39407864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 40171937 - 40171979
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| ||||||||||| ||||||||    
T  40171937 tcccaaattgtatgtcactttacaataccaatgacacattaat 40171979  T

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Target: chr2; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 240 - 276
Target Start/End: Complemental strand, 13849496 - 13849460
Alignment:
Q  240 aaattgtatgtcactttagaataccaatgaaacatta 276  Q
    ||||||||||||||||||||||| |||||||||||||    
T  13849496 aaattgtatgtcactttagaatagcaatgaaacatta 13849460  T

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Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 14723832 - 14723880
Alignment:
Q  230 cctccttcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||| |||||||||||||||| ||||| ||||||||||||| ||||||    
T  14723832 cctccgtcccaaattgtatgtcgctttataataccaatgaaatattaat 14723880  T

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Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 278
Target Start/End: Original strand, 6312266 - 6312305
Alignment:
Q  239 caaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||| |||||| |||||||||||||    
T  6312266 caaattgtatgtcactttacaataccgatgaaacattaat 6312305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 278
Target Start/End: Original strand, 6596515 - 6596554
Alignment:
Q  239 caaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||| |||| ||||||||||||||||||||    
T  6596515 caaattgtatgtcattttacaataccaatgaaacattaat 6596554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 278
Target Start/End: Complemental strand, 27341819 - 27341780
Alignment:
Q  239 caaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||  ||||||||||||||||||||    
T  27341819 caaattgtatgtcacttttcaataccaatgaaacattaat 27341780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 4646628 - 4646586
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||| |||||||| ||||||||| ||||||||||    
T  4646628 tcccaaattgtatatcactttataataccaataaaacattaat 4646586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 240 - 278
Target Start/End: Complemental strand, 8341712 - 8341674
Alignment:
Q  240 aaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||| | |||||||||||||||||||||||||||    
T  8341712 aaattgtatattactttagaataccaatgaaacattaat 8341674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 12192452 - 12192494
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||| |||||||||||| ||||||||||||| ||||||    
T  12192452 tcccaaattatatgtcactttacaataccaatgaaatattaat 12192494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 12363666 - 12363708
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| |||||||||||| |||||||    
T  12363666 tcccaaattgtatgtcgctttacaataccaatgaatcattaat 12363708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 18450165 - 18450123
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| |||||||||||| |||||||    
T  18450165 tcccaaattgtatgtcgctttacaataccaatgaatcattaat 18450123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 230 - 260
Target Start/End: Complemental strand, 26850099 - 26850069
Alignment:
Q  230 cctccttcccaaattgtatgtcactttagaa 260  Q
    |||||||||||||||||||||||||||||||    
T  26850099 cctccttcccaaattgtatgtcactttagaa 26850069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 34036144 - 34036186
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  34036144 tcccaaattgtatgtcgctttacaataccaatgaaaaattaat 34036186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 226 - 260
Target Start/End: Complemental strand, 39235263 - 39235229
Alignment:
Q  226 tactcctccttcccaaattgtatgtcactttagaa 260  Q
    ||||||||| |||||||||||||||||||||||||    
T  39235263 tactcctccgtcccaaattgtatgtcactttagaa 39235229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Complemental strand, 40425196 - 40425154
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||| |||||||||| ||| |||||    
T  40425196 tcccaaattgtatgtcactttacaataccaatgcaactttaat 40425154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 236 - 277
Target Start/End: Complemental strand, 20925933 - 20925892
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaa 277  Q
    |||||||||||||||| ||||| |||||||||||| ||||||    
T  20925933 tcccaaattgtatgtcgctttacaataccaatgaatcattaa 20925892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 230 - 278
Target Start/End: Original strand, 3870796 - 3870844
Alignment:
Q  230 cctccttcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||| || ||||||||||||| ||||| |||||||||| |||||||||    
T  3870796 cctccgtctcaaattgtatgtcgctttacaataccaatgcaacattaat 3870844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 236 - 276
Target Start/End: Complemental strand, 36174594 - 36174554
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacatta 276  Q
    |||||||||||||||| ||||| ||||| ||||||||||||    
T  36174594 tcccaaattgtatgtcgctttacaatactaatgaaacatta 36174554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 98908 - 98950
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  98908 tcccaaattatatgtcactttagaataccaatgaaacattaat 98950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 524337 - 524379
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||||||||||||||||||||||||| ||||    
T  524337 tcccaaattgtatgtcactttagaataccaatgaaacaataat 524379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 278
Target Start/End: Complemental strand, 4212 - 4173
Alignment:
Q  239 caaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||| |||| |||||||||||||||    
T  4212 caaattgtatgtcactttacaatatcaatgaaacattaat 4173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0140 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0140
Description:

Target: scaffold0140; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 239 - 278
Target Start/End: Complemental strand, 18357 - 18318
Alignment:
Q  239 caaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    ||||||||||||||||||| ||||||||||||| ||||||    
T  18357 caaattgtatgtcactttataataccaatgaaatattaat 18318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 236 - 278
Target Start/End: Original strand, 63390 - 63432
Alignment:
Q  236 tcccaaattgtatgtcactttagaataccaatgaaacattaat 278  Q
    |||||||||||||||| ||||| ||||||||||||| ||||||    
T  63390 tcccaaattgtatgtcgctttacaataccaatgaaaaattaat 63432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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