View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15699_low_8 (Length: 331)
Name: NF15699_low_8
Description: NF15699
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15699_low_8 |
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Alignment Details
Target: chr4 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 57 - 318
Target Start/End: Complemental strand, 34960670 - 34960407
Alignment:
| Q |
57 |
aacagttgaaaaccttttgttagacaaaagggcagtaaaatgcttgtgttttttaaatagtaataatttgatataatttatcaattcattctatgaatta |
156 |
Q |
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| T |
34960670 |
aacagttgaaaaccttttgttagacaaaagggcagtaaaatgcttgtgttttttaaataataataatttgatataatttatcaattcattctatgaatta |
34960571 |
T |
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| Q |
157 |
aatttatgcgtttttaaattgaatttcatgnnnnnnnttgaattcaat-nnnnnnnnnctt-aacgtgtgctatgctatcattatagttgggaaaataag |
254 |
Q |
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| T |
34960570 |
aatttatgcgtttttaaattgaatttcatgaaaaaaattgaattcaataaaaaaaaaacttaaacgtgtgctatgctatcattatagttgggaaaataag |
34960471 |
T |
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| Q |
255 |
ccagcaaaatatcactattactttagcatcatctgtgggggcttaaagcatgatgctattgatg |
318 |
Q |
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| T |
34960470 |
ccagcaaaatatcactattactttagcatcatctgtgggggcttaaagcatgatgctatagatg |
34960407 |
T |
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