View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1569_high_10 (Length: 362)
Name: NF1569_high_10
Description: NF1569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1569_high_10 |
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Alignment Details
Target: chr7 (Bit Score: 262; Significance: 1e-146; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 262; E-Value: 1e-146
Query Start/End: Original strand, 17 - 341
Target Start/End: Original strand, 19378199 - 19378524
Alignment:
| Q |
17 |
tcaatgacttttggtatttataggatttgctacatgaatagataaaaaacagaatatatgtgaatccatttaatatcattgtaaatcgattacttatttg |
116 |
Q |
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|||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
19378199 |
tcaatgacttttggtatttataggatttgctacaagtatagataaaaaacagaatatatgtgaatccatttaatatcattgtgaatcgattacttatttg |
19378298 |
T |
|
| Q |
117 |
atggtaagataacttcaaaaatgtttcaaagcatttcgaagtgttttgattatgtttctaacatgcatatatcttaacgcatgataaaaatcctctcagt |
216 |
Q |
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|||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||| |
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| T |
19378299 |
atggtaagatgacttcaaaaatgtttcaaagcagttcgaagtgttttgattatgtttctaacatgcatatatcttaatgcatgatgaaaatcctctcagt |
19378398 |
T |
|
| Q |
217 |
aagatttctagtaatccggctcagtaagttctcgatcttctaacattgctggtgttagttcaatggtaaaagcatagctttgtactaaaacataaaaatc |
316 |
Q |
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||||||||||||| |||||||||||||||||||||| || ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
19378399 |
aagatttctagtattccggctcagtaagttctcgattttttaacattttaggtgttagttcaatggtaaaagcatagctttgtaataaaacataaaaatc |
19378498 |
T |
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| Q |
317 |
acacaaaacaaac-acaagcttaata |
341 |
Q |
| |
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||||||||||||| |||||||||||| |
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| T |
19378499 |
acacaaaacaaacaacaagcttaata |
19378524 |
T |
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