View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1569_high_14 (Length: 296)
Name: NF1569_high_14
Description: NF1569
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1569_high_14 |
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Alignment Details
Target: chr6 (Bit Score: 251; Significance: 1e-139; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 251; E-Value: 1e-139
Query Start/End: Original strand, 13 - 279
Target Start/End: Original strand, 3985739 - 3986005
Alignment:
| Q |
13 |
tgagaaggaaaacgttataaagctaaatatttcatatttcatcaatcatattatggcaagcattagtgtggttccttggcaacccttattagtacaaaag |
112 |
Q |
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| T |
3985739 |
tgagaaggaaaactttataaagctaaatatttcatatttcatcaatcatattatggcaagcattagtgtggttccttggcaacccttattagtacaaaag |
3985838 |
T |
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| Q |
113 |
aagcatagacttaatagtcattttcacacaaagaaaacatcatgttcagtgattaggaatgaaaaaacatcctcattcagctatagaagcattgcaaatg |
212 |
Q |
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||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
3985839 |
aagcatatacttaatagtcattttcatacaaagaaaacatcatgttcagtgattaggaatgaaaaaacatcctcattcagctatagaagcattgcaaatg |
3985938 |
T |
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| Q |
213 |
ttcctttctatgagttaccaggggtatattatcaaagttttcatccttaattaccatctttatcttc |
279 |
Q |
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| T |
3985939 |
ttcctttctatgagttaccaggggtatattatcaaagttttcatccttaattaccatcttcatcttc |
3986005 |
T |
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