View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15702_low_5 (Length: 251)
Name: NF15702_low_5
Description: NF15702
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15702_low_5 |
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Alignment Details
Target: chr8 (Bit Score: 170; Significance: 2e-91; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 170; E-Value: 2e-91
Query Start/End: Original strand, 1 - 233
Target Start/End: Complemental strand, 31936685 - 31936471
Alignment:
| Q |
1 |
ttctctctaaccccctattccttctaatccacctcttccaattcactcctttaaagagagttccacctctacagtacaaactaaaatcctctgttccaaa |
100 |
Q |
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| T |
31936685 |
ttctctctaaccccctattccttctaatccacctcttccaattcactcctttaaagagagttccacctctacagtacaaactaaaatcctctgttccaaa |
31936586 |
T |
|
| Q |
101 |
ttttgtactacctactttagttcacagcacacaaaaactatactataattggttggaatattcattcaatcatgtctatgttctcatatcacaaacattc |
200 |
Q |
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|||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31936585 |
tttt------------------cacagcacacaaaaactatactataattggttggtatattcattcaatcatgtctatgttctcatatcacaaacattc |
31936504 |
T |
|
| Q |
201 |
ttctaaccgtttcttcattttcctacttatcct |
233 |
Q |
| |
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||||||||||||||||||||||||||||||||| |
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| T |
31936503 |
ttctaaccgtttcttcattttcctacttatcct |
31936471 |
T |
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