View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15703_high_6 (Length: 416)
Name: NF15703_high_6
Description: NF15703
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15703_high_6 |
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Alignment Details
Target: chr2 (Bit Score: 315; Significance: 1e-177; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 315; E-Value: 1e-177
Query Start/End: Original strand, 13 - 399
Target Start/End: Complemental strand, 15905656 - 15905270
Alignment:
| Q |
13 |
ataatactatgattgaaaattgaacattgaaaataatgataatggaataaatgtttatgtatgaaatagagaaagaaagcatgatctattgtgcatccaa |
112 |
Q |
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| T |
15905656 |
ataatactatgattgaaaattgaacattgaaaataatgataatggaataaatgtttatgtatgaactagagaaagaaagcatgatctattgtgcatccaa |
15905557 |
T |
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| Q |
113 |
tatggatgttcccactgcaggtgtgtcccatcttcactattttagtgttactgtcacatctaggttttcaatatctttacaatccaaatttacccatgat |
212 |
Q |
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| T |
15905556 |
tatggatgttcccactgcaggtgtgtcccatcttcactattttagtgttactgtcacatctaggttttcaatatctctacaatccaaatttaaccatgat |
15905457 |
T |
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| Q |
213 |
ttatcggtctaaattgtatttgattgcgattctttacaatattaagaatcgcaatagaataatgcgatcatagttgcaattagattgcaacaattgtgtt |
312 |
Q |
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| T |
15905456 |
ttttctgtctaaattgtatttgattgcgattctctgcaatattaagaatcgcagaagaatgatgcgatcatagttgcaattaggttgcatcaattgtgtt |
15905357 |
T |
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| Q |
313 |
tgtactcgggcaactttttattatatcaagtatcgtaacctaactgcgacagcaatttaaaacctaacacattttgattgaaaaaat |
399 |
Q |
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| T |
15905356 |
cgtactcgggcaactttttattatatcaagtatcgtaacctaactgcgatggcaatttaaaacctaataaatgttgattgaaaaaat |
15905270 |
T |
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