View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15704_low_19 (Length: 234)
Name: NF15704_low_19
Description: NF15704
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15704_low_19 |
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Alignment Details
Target: chr8 (Bit Score: 198; Significance: 1e-108; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 13 - 218
Target Start/End: Original strand, 31521862 - 31522067
Alignment:
| Q |
13 |
attattctcatttatagctagtgtattatatttgctctaatttttatatctaacatagtaagaaaaatacaaattttaaccaattttatactcacaaatt |
112 |
Q |
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| T |
31521862 |
attattctcatttatagctagtgtattatatttgctctaatttttatatctaacatagtaagaaaaatacaaattttaaccaattttatagtcacaaatt |
31521961 |
T |
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| Q |
113 |
gttctgtcatataagatcaaaacccattgtcaagtcgtcatagtttcactagtcatccaattaatagtatgttaagcactgaagctatgtcaagatagta |
212 |
Q |
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| T |
31521962 |
gttctgtcatataagatcaaaacccattgtcaagtcgtcatagtttcactagtcatccaattaatagtatgttaagcactgaagctatgccaagatagta |
31522061 |
T |
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| Q |
213 |
ttatat |
218 |
Q |
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|||||| |
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| T |
31522062 |
ttatat |
31522067 |
T |
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