View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15705_high_22 (Length: 313)
Name: NF15705_high_22
Description: NF15705
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15705_high_22 |
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Alignment Details
Target: chr2 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 7 - 278
Target Start/End: Complemental strand, 44206800 - 44206530
Alignment:
| Q |
7 |
tgtcgaagaatataatatcatgttttttaataactcca--tcttttttctttcaattaattactatgttcctatgcttttgtgtcacttttcttgatacc |
104 |
Q |
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| T |
44206800 |
tgtcgaatagtataatagcattgtttgtaataactccacatcttttttctttcaattaatta---tgttcctatgcttttgtgtcacttttcttgatacc |
44206704 |
T |
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| Q |
105 |
tattaaaaagaaactcatattaacgactttgtttcgatgtatatagaatatgtggtatcattatcaatcttgttatatggttgattccataattaccttt |
204 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44206703 |
tattaaaaagaaactcatattgacgactttgtttcgatgtatatagaatatgtggtatcattatcaatcttgttatatggttgattccataattaccttt |
44206604 |
T |
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| Q |
205 |
gaataggccaatttttgtctacttcttgtatgtaagttgattgatgagtttaggtcacttattattattattat |
278 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |
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| T |
44206603 |
gaataggccaatttttgtctacttcttgtatgtaagttgattgatgaatttaggtcacttattattattattat |
44206530 |
T |
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