View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15706_high_4 (Length: 303)

Name: NF15706_high_4
Description: NF15706
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15706_high_4
NF15706_high_4
[»] chr3 (50 HSPs)
chr3 (13-283)||(9842746-9843010)
chr3 (13-177)||(9853542-9853706)
chr3 (18-96)||(30257631-30257709)
chr3 (18-96)||(26174120-26174198)
chr3 (18-96)||(40940832-40940910)
chr3 (18-96)||(53424288-53424366)
chr3 (36-101)||(15566629-15566694)
chr3 (36-116)||(25289844-25289919)
chr3 (36-91)||(7470345-7470400)
chr3 (34-97)||(14343416-14343479)
chr3 (18-96)||(26108299-26108377)
chr3 (18-96)||(30807265-30807343)
chr3 (18-96)||(34492687-34492765)
chr3 (18-96)||(35492918-35492996)
chr3 (18-96)||(46576355-46576433)
chr3 (18-96)||(50582999-50583077)
chr3 (18-90)||(7485637-7485709)
chr3 (36-96)||(25379768-25379828)
chr3 (36-96)||(40133579-40133639)
chr3 (36-96)||(45529884-45529944)
chr3 (36-96)||(48977395-48977455)
chr3 (33-96)||(11390609-11390672)
chr3 (18-96)||(8456262-8456340)
chr3 (18-96)||(52821747-52821825)
chr3 (36-89)||(49167070-49167123)
chr3 (19-96)||(52455762-52455839)
chr3 (36-96)||(21362950-21363010)
chr3 (36-91)||(49258392-49258447)
chr3 (36-91)||(53234040-53234095)
chr3 (18-89)||(53288824-53288895)
chr3 (18-96)||(18176999-18177077)
chr3 (34-75)||(29915397-29915438)
chr3 (34-75)||(29964550-29964591)
chr3 (36-85)||(51532807-51532856)
chr3 (36-96)||(4462640-4462700)
chr3 (18-101)||(19857054-19857136)
chr3 (19-118)||(31537951-31538045)
chr3 (40-91)||(36660782-36660833)
chr3 (36-74)||(1692863-1692901)
chr3 (18-96)||(4252508-4252586)
chr3 (18-96)||(45272528-45272606)
chr3 (36-101)||(32151426-32151491)
chr3 (36-75)||(25017543-25017582)
chr3 (18-85)||(26158836-26158903)
chr3 (36-75)||(39041982-39042021)
chr3 (36-86)||(10083949-10083999)
chr3 (36-86)||(10190872-10190922)
chr3 (18-96)||(55371397-55371475)
chr3 (19-96)||(25344170-25344247)
chr3 (36-85)||(34844396-34844445)
[»] chr8 (41 HSPs)
chr8 (18-96)||(27746447-27746525)
chr8 (18-96)||(3734735-3734813)
chr8 (18-96)||(15259518-15259596)
chr8 (18-96)||(28193485-28193563)
chr8 (18-96)||(34237767-34237845)
chr8 (36-96)||(18532118-18532178)
chr8 (18-97)||(21603240-21603319)
chr8 (33-92)||(24018397-24018456)
chr8 (18-89)||(39349274-39349345)
chr8 (18-96)||(4718656-4718734)
chr8 (18-96)||(21667561-21667639)
chr8 (36-85)||(2166721-2166770)
chr8 (49-90)||(9047421-9047462)
chr8 (19-96)||(19471620-19471697)
chr8 (19-96)||(19542544-19542621)
chr8 (19-96)||(19590075-19590152)
chr8 (18-86)||(14632975-14633043)
chr8 (36-96)||(20305919-20305979)
chr8 (36-96)||(21092552-21092612)
chr8 (36-96)||(28964044-28964104)
chr8 (18-96)||(2618197-2618275)
chr8 (36-86)||(4698853-4698903)
chr8 (37-91)||(8042670-8042724)
chr8 (18-96)||(11714931-11715009)
chr8 (18-96)||(32879290-32879368)
chr8 (36-96)||(264529-264589)
chr8 (36-96)||(651332-651392)
chr8 (36-96)||(837067-837127)
chr8 (36-84)||(20469940-20469988)
chr8 (36-96)||(34694706-34694766)
chr8 (36-96)||(42643248-42643308)
chr8 (33-96)||(33585754-33585817)
chr8 (18-84)||(8765638-8765704)
chr8 (19-96)||(7558056-7558133)
chr8 (36-96)||(26168978-26169038)
chr8 (37-93)||(34639337-34639393)
chr8 (18-96)||(42328016-42328093)
chr8 (19-96)||(8387557-8387634)
chr8 (36-88)||(22200690-22200742)
chr8 (18-90)||(28088303-28088375)
chr8 (56-96)||(28908832-28908872)
[»] chr2 (37 HSPs)
chr2 (18-96)||(44946165-44946243)
chr2 (36-86)||(5394034-5394084)
chr2 (18-96)||(15037966-15038044)
chr2 (18-96)||(17324773-17324851)
chr2 (36-90)||(41314005-41314059)
chr2 (19-96)||(11941323-11941400)
chr2 (36-89)||(19849847-19849900)
chr2 (18-91)||(27290600-27290673)
chr2 (18-90)||(10582102-10582174)
chr2 (18-96)||(36390680-36390756)
chr2 (18-96)||(25293173-25293251)
chr2 (18-96)||(33827685-33827763)
chr2 (37-87)||(44610090-44610140)
chr2 (19-96)||(44976267-44976344)
chr2 (36-96)||(6714411-6714471)
chr2 (36-96)||(18976555-18976615)
chr2 (39-86)||(1191530-1191577)
chr2 (36-91)||(4852570-4852625)
chr2 (36-87)||(8258913-8258964)
chr2 (36-91)||(19054037-19054092)
chr2 (18-96)||(30466942-30467020)
chr2 (40-94)||(40997484-40997538)
chr2 (19-96)||(41329850-41329927)
chr2 (36-96)||(8192481-8192541)
chr2 (18-86)||(43374437-43374505)
chr2 (36-87)||(34516538-34516589)
chr2 (18-96)||(4567549-4567627)
chr2 (18-96)||(4618797-4618875)
chr2 (36-90)||(32526215-32526269)
chr2 (18-96)||(32845098-32845176)
chr2 (18-91)||(23787120-23787193)
chr2 (36-72)||(35171831-35171867)
chr2 (36-91)||(19605975-19606030)
chr2 (33-84)||(29361573-29361623)
chr2 (36-86)||(36242442-36242492)
chr2 (35-96)||(14946786-14946847)
chr2 (36-96)||(24196011-24196071)
[»] chr4 (40 HSPs)
chr4 (36-96)||(43719195-43719255)
chr4 (18-96)||(25852221-25852299)
chr4 (18-96)||(52983626-52983704)
chr4 (33-96)||(46714399-46714462)
chr4 (18-96)||(1985843-1985921)
chr4 (36-101)||(35229170-35229235)
chr4 (36-89)||(49287872-49287925)
chr4 (18-86)||(7392075-7392143)
chr4 (18-90)||(27528907-27528979)
chr4 (36-96)||(34844888-34844948)
chr4 (40-96)||(54127476-54127532)
chr4 (36-91)||(33992638-33992693)
chr4 (18-96)||(13873407-13873485)
chr4 (18-96)||(32986204-32986282)
chr4 (18-96)||(33696391-33696469)
chr4 (19-96)||(51535620-51535697)
chr4 (36-96)||(19660662-19660722)
chr4 (36-96)||(22625200-22625260)
chr4 (36-96)||(32942377-32942437)
chr4 (36-96)||(40058982-40059042)
chr4 (18-85)||(20078096-20078163)
chr4 (18-96)||(2351020-2351098)
chr4 (36-89)||(35674871-35674924)
chr4 (19-96)||(41621709-41621786)
chr4 (36-96)||(13584384-13584444)
chr4 (36-96)||(34835536-34835596)
chr4 (36-91)||(12710191-12710246)
chr4 (18-96)||(20566356-20566435)
chr4 (18-75)||(12500170-12500227)
chr4 (47-96)||(55961883-55961932)
chr4 (36-96)||(5609332-5609392)
chr4 (36-96)||(42245753-42245813)
chr4 (36-96)||(43352454-43352514)
chr4 (18-96)||(45787816-45787893)
chr4 (43-96)||(13550215-13550268)
chr4 (36-85)||(20527163-20527212)
chr4 (36-96)||(44343520-44343581)
chr4 (60-93)||(45302849-45302882)
chr4 (36-96)||(9646346-9646406)
chr4 (54-90)||(34722183-34722219)
[»] chr7 (50 HSPs)
chr7 (33-96)||(40332110-40332173)
chr7 (18-96)||(2751282-2751360)
chr7 (18-96)||(27704013-27704091)
chr7 (36-96)||(10091199-10091259)
chr7 (18-96)||(7175974-7176052)
chr7 (18-96)||(7275288-7275366)
chr7 (18-96)||(21217945-21218023)
chr7 (18-96)||(22119899-22119977)
chr7 (18-96)||(40543022-40543100)
chr7 (18-91)||(7799944-7800017)
chr7 (18-91)||(17197062-17197135)
chr7 (36-96)||(2103066-2103126)
chr7 (36-96)||(23854407-23854467)
chr7 (37-96)||(28089827-28089886)
chr7 (18-96)||(11997860-11997938)
chr7 (36-90)||(22703503-22703557)
chr7 (34-96)||(42913641-42913703)
chr7 (18-91)||(21835167-21835240)
chr7 (18-91)||(22299865-22299938)
chr7 (36-96)||(2344310-2344370)
chr7 (36-96)||(18044118-18044178)
chr7 (34-90)||(19421248-19421304)
chr7 (36-96)||(22638303-22638363)
chr7 (40-115)||(17212050-17212120)
chr7 (37-116)||(25333415-25333489)
chr7 (33-96)||(31713022-31713085)
chr7 (36-96)||(9718117-9718177)
chr7 (36-96)||(13332553-13332613)
chr7 (36-96)||(21370608-21370668)
chr7 (36-96)||(27312163-27312223)
chr7 (36-96)||(31197602-31197662)
chr7 (37-96)||(27009370-27009429)
chr7 (36-99)||(37693692-37693755)
chr7 (18-96)||(1469123-1469201)
chr7 (18-96)||(8435807-8435885)
chr7 (18-96)||(22696331-22696409)
chr7 (36-88)||(14199796-14199848)
chr7 (36-96)||(21574233-21574293)
chr7 (18-90)||(37056231-37056303)
chr7 (18-65)||(654816-654863)
chr7 (41-92)||(28003851-28003902)
chr7 (36-91)||(32849607-32849662)
chr7 (36-87)||(43785429-43785480)
chr7 (18-96)||(12211647-12211725)
chr7 (36-86)||(22264632-22264682)
chr7 (33-75)||(36772429-36772471)
chr7 (38-96)||(42031930-42031988)
chr7 (43-96)||(9683837-9683890)
chr7 (36-89)||(23012638-23012691)
chr7 (18-91)||(39145764-39145837)
[»] chr5 (49 HSPs)
chr5 (18-101)||(31288058-31288141)
chr5 (18-96)||(25586939-25587017)
chr5 (19-96)||(13038567-13038644)
chr5 (36-96)||(32059570-32059630)
chr5 (19-91)||(37495059-37495131)
chr5 (36-91)||(1827660-1827715)
chr5 (18-96)||(11926614-11926692)
chr5 (19-96)||(11465020-11465097)
chr5 (33-90)||(15971249-15971306)
chr5 (36-96)||(22392708-22392768)
chr5 (36-96)||(37397720-37397780)
chr5 (36-91)||(15641235-15641290)
chr5 (33-96)||(23270649-23270712)
chr5 (18-101)||(33709613-33709696)
chr5 (18-96)||(8484773-8484851)
chr5 (36-86)||(12398578-12398628)
chr5 (18-96)||(38631073-38631151)
chr5 (19-96)||(13108562-13108639)
chr5 (36-96)||(4603784-4603844)
chr5 (36-88)||(10869695-10869747)
chr5 (36-84)||(18207226-18207274)
chr5 (36-96)||(34049829-34049889)
chr5 (18-89)||(38684222-38684293)
chr5 (19-117)||(34310133-34310226)
chr5 (18-96)||(42193492-42193570)
chr5 (35-96)||(5067308-5067369)
chr5 (37-86)||(19456340-19456389)
chr5 (18-91)||(27498843-27498916)
chr5 (36-89)||(28614614-28614667)
chr5 (36-96)||(36954825-36954885)
chr5 (54-96)||(3715057-3715099)
chr5 (36-90)||(7085756-7085810)
chr5 (36-86)||(30485845-30485895)
chr5 (36-101)||(6014410-6014475)
chr5 (36-85)||(14656645-14656694)
chr5 (18-91)||(26009376-26009449)
chr5 (18-89)||(930596-930668)
chr5 (35-90)||(16616132-16616187)
chr5 (45-96)||(25750750-25750801)
chr5 (41-96)||(27487690-27487745)
chr5 (18-96)||(15931066-15931144)
chr5 (18-96)||(19145523-19145601)
chr5 (40-90)||(40330646-40330696)
chr5 (54-96)||(42006800-42006842)
chr5 (36-85)||(16172985-16173034)
chr5 (36-84)||(43442222-43442271)
chr5 (38-86)||(7151346-7151394)
chr5 (44-96)||(21042663-21042715)
chr5 (57-85)||(32007772-32007800)
[»] scaffold0576 (1 HSPs)
scaffold0576 (18-96)||(5194-5272)
[»] chr6 (27 HSPs)
chr6 (18-96)||(15360210-15360288)
chr6 (36-92)||(11007176-11007232)
chr6 (36-96)||(12591644-12591704)
chr6 (18-96)||(9238982-9239060)
chr6 (36-96)||(11448878-11448938)
chr6 (33-96)||(9843945-9844008)
chr6 (18-92)||(9208263-9208337)
chr6 (18-99)||(654258-654339)
chr6 (34-91)||(9690766-9690823)
chr6 (36-96)||(22576074-22576134)
chr6 (36-96)||(33718588-33718648)
chr6 (18-96)||(21982432-21982510)
chr6 (18-96)||(34147353-34147431)
chr6 (18-96)||(34159969-34160047)
chr6 (40-96)||(13753247-13753303)
chr6 (19-75)||(14212920-14212976)
chr6 (36-96)||(28672074-28672134)
chr6 (36-87)||(17149586-17149637)
chr6 (18-91)||(1344949-1345020)
chr6 (18-96)||(3222747-3222824)
chr6 (35-79)||(3433602-3433646)
chr6 (36-88)||(5360201-5360253)
chr6 (40-88)||(33499489-33499537)
chr6 (36-86)||(28968172-28968222)
chr6 (36-93)||(17081184-17081241)
chr6 (36-88)||(17706437-17706489)
chr6 (36-96)||(21148640-21148700)
[»] scaffold0049 (1 HSPs)
scaffold0049 (36-96)||(66769-66829)
[»] chr1 (47 HSPs)
chr1 (36-96)||(27454996-27455056)
chr1 (36-96)||(29057467-29057527)
chr1 (36-96)||(46113532-46113592)
chr1 (18-96)||(4621349-4621427)
chr1 (18-96)||(7197358-7197436)
chr1 (18-96)||(24674400-24674478)
chr1 (18-96)||(46607817-46607895)
chr1 (18-91)||(30677188-30677261)
chr1 (36-96)||(8077654-8077714)
chr1 (18-91)||(7578421-7578494)
chr1 (18-91)||(7946856-7946929)
chr1 (18-91)||(21726741-21726814)
chr1 (36-96)||(7766857-7766917)
chr1 (36-96)||(15059532-15059592)
chr1 (18-114)||(20487302-20487393)
chr1 (18-90)||(24122036-24122108)
chr1 (36-96)||(34778349-34778409)
chr1 (36-88)||(37351591-37351643)
chr1 (18-96)||(168208-168286)
chr1 (36-90)||(17935782-17935836)
chr1 (36-86)||(33905640-33905690)
chr1 (35-96)||(1378752-1378813)
chr1 (33-90)||(1378911-1378968)
chr1 (36-89)||(19034516-19034569)
chr1 (18-119)||(23734105-23734201)
chr1 (18-119)||(23741297-23741393)
chr1 (18-91)||(24216990-24217063)
chr1 (34-90)||(8779864-8779920)
chr1 (36-91)||(18646865-18646920)
chr1 (18-81)||(36156000-36156063)
chr1 (18-85)||(45859155-45859222)
chr1 (51-101)||(6776146-6776196)
chr1 (18-96)||(32729552-32729630)
chr1 (33-91)||(32930761-32930819)
chr1 (38-91)||(1138591-1138644)
chr1 (36-88)||(809237-809289)
chr1 (36-84)||(9500485-9500533)
chr1 (36-96)||(14258557-14258617)
chr1 (36-96)||(25237119-25237179)
chr1 (36-96)||(52135137-52135197)
chr1 (33-96)||(37349530-37349593)
chr1 (18-91)||(1486432-1486503)
chr1 (18-96)||(2272351-2272429)
chr1 (41-91)||(10059067-10059117)
chr1 (58-96)||(47091697-47091735)
chr1 (58-96)||(52592567-52592605)
chr1 (36-96)||(23232395-23232455)
[»] scaffold0459 (1 HSPs)
scaffold0459 (33-96)||(10820-10883)
[»] scaffold0366 (2 HSPs)
scaffold0366 (33-96)||(12127-12190)
scaffold0366 (36-96)||(9429-9489)
[»] scaffold0026 (1 HSPs)
scaffold0026 (18-96)||(97478-97556)
[»] scaffold0623 (1 HSPs)
scaffold0623 (36-96)||(1186-1246)
[»] scaffold0199 (1 HSPs)
scaffold0199 (36-96)||(8537-8597)
[»] scaffold0028 (1 HSPs)
scaffold0028 (19-96)||(27783-27860)
[»] scaffold0717 (1 HSPs)
scaffold0717 (36-96)||(88-148)
[»] scaffold0460 (1 HSPs)
scaffold0460 (18-114)||(8291-8382)
[»] scaffold0068 (1 HSPs)
scaffold0068 (36-96)||(41774-41834)
[»] scaffold0070 (1 HSPs)
scaffold0070 (18-96)||(40332-40410)
[»] scaffold0051 (1 HSPs)
scaffold0051 (18-96)||(52983-53061)
[»] scaffold0019 (1 HSPs)
scaffold0019 (18-84)||(161828-161894)
[»] scaffold0328 (1 HSPs)
scaffold0328 (40-96)||(14998-15054)
[»] scaffold0217 (1 HSPs)
scaffold0217 (36-96)||(7439-7499)
[»] scaffold0157 (1 HSPs)
scaffold0157 (18-75)||(20250-20307)
[»] scaffold0240 (1 HSPs)
scaffold0240 (36-96)||(12884-12944)


Alignment Details
Target: chr3 (Bit Score: 187; Significance: 1e-101; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 13 - 283
Target Start/End: Complemental strand, 9843010 - 9842746
Alignment:
Q  13 cataggaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaaaccaaccccaaatggg 112  Q
    |||| ||||||| || || ||| ||||||| | ||||||| |||||||| ||||||||||||| ||||||||||||||||||||     |||||||||||    
T  9843010 catacgaaattgacaccagtgggaatcgaatc-gagacctctggaggagaaaactccaagatcccaaaccaaccactagaccaa-----ccccaaatggg 9842917  T
Q  113 tttaaactcctgaatattaaagcatgatttagtgcagatatatcttctctttcatacagattctgatgagatatattactcataaggtttacgataatat 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  9842916 tttaaactcctgaatattaaagcatgatttagtgcagatatatcttctctttcatacagattctgatgagatatattactcataaggtttacgataatat 9842817  T
Q  213 aattaatatacaggagattatgcgggatcaattgaaaagaataatatactagagttatggcttgatacata 283  Q
    ||||||||||||||||||||||||    |||||||||||||||||||| ||||||||||||||||||||||    
T  9842816 aattaatatacaggagattatgcgaagacaattgaaaagaataatatattagagttatggcttgatacata 9842746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 13 - 177
Target Start/End: Complemental strand, 9853706 - 9853542
Alignment:
Q  13 cataggaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaaaccaaccccaaatggg 112  Q
    |||| |||||||||| |  ||| |||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||    
T  9853706 catacgaaattggcaccggtgggaatcgaacctgagacctttggaggagcaaactccaagatcccaaactaaccactagaccaaaccaaccccaaatggg 9853607  T
Q  113 tttaaactcctgaatattaaagcatgatttagtgcagatatatcttctctttcatacagattctg 177  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  9853606 tttaaactcctgaatattaaagcatgattcagtgcagatatatcttctctttcatacagattctg 9853542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 30257709 - 30257631
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||| || |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||    
T  30257709 gaaattggcaccaaagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaa 30257631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 26174198 - 26174120
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  |||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  26174198 gaaattggcaccagaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 26174120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 40940910 - 40940832
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||    
T  40940910 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaa 40940832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 53424288 - 53424366
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||| || ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  53424288 gaaattggcaccaaagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 53424366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 15566629 - 15566694
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaaaccaa 101  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| |||| ||||    
T  15566629 aatcgaacctgagacctctggaggagcaaactccaagatctcaagccaaccactaggccaacccaa 15566694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 116
Target Start/End: Original strand, 25289844 - 25289919
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaaaccaaccccaaatgggttta 116  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||     ||||||||||||||||    
T  25289844 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagacca-----accccaaatgggttta 25289919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 7470345 - 7470400
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactag 91  Q
    ||||||||||||||||||||||||||||||||||||||||||||  ||||||||||    
T  7470345 aatcgaacctgagacctttggaggagcaaactccaagatctcaagtcaaccactag 7470400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 34 - 97
Target Start/End: Original strand, 14343416 - 14343479
Alignment:
Q  34 gaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaaa 97  Q
    ||||||||| ||||||| | |||||||||||||||||||||||||||||||||| |||||||||    
T  14343416 gaaatcgaatctgagacatctggaggagcaaactccaagatctcaaaccaaccaatagaccaaa 14343479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 26108377 - 26108299
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  26108377 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 26108299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 30807265 - 30807343
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  30807265 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 30807343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 34492687 - 34492765
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||||||  || |||||||| |||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  34492687 gaaattggcagcagagggaatcgaacatgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 34492765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 35492996 - 35492918
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  35492996 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 35492918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 46576433 - 46576355
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  46576433 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 46576355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 50583077 - 50582999
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  ||||||||||||||| |||||  |||||||||||||||||||| ||||||||||||||| ||||    
T  50583077 gaaattggcaacagaggaaatcgaacctgaaaccttaagaggagcaaactccaagatcccaaaccaaccactaggccaa 50582999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 7485637 - 7485709
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccacta 90  Q
    |||||||||| ||  || |||||||||||||||||||||||||||||||||||||||| |||  |||||||||    
T  7485637 gaaattggcatcagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagtcaaccacta 7485709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 25379828 - 25379768
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  25379828 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 25379768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 40133579 - 40133639
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||| ||||    
T  40133579 aatcgaacctgagacctttggaggagcaaactccaaaatcccaagccaaccactaggccaa 40133639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 45529884 - 45529944
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  45529884 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 45529944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 48977455 - 48977395
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||||||||||||||||||||||||||||||||| |||  |||||||||| ||||    
T  48977455 aatcgaacctgagacctttggaggagcaaactccaagatcccaagtcaaccactaggccaa 48977395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 33 - 96
Target Start/End: Complemental strand, 11390672 - 11390609
Alignment:
Q  33 ggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||| ||||||| | ||||||||||| ||||||||||||||||||||||||||||| ||||    
T  11390672 ggaaatcaaacctgaaatctttggaggagaaaactccaagatctcaaaccaaccactaggccaa 11390609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 8456262 - 8456340
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||||||||||||| ||||||||||||||| |||||| ||| ||||||||||| ||||    
T  8456262 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactcgaagatcccaagccaaccactaggccaa 8456340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 52821747 - 52821825
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||||||||||||| |||||||||||||||||||||| |||  |||||||||| ||||    
T  52821747 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaa 52821825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 49167123 - 49167070
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccact 89  Q
    |||||||||||| | ||||||||||||||||||||||||||||| |||||||||    
T  49167123 aatcgaacctgatatctttggaggagcaaactccaagatctcaagccaaccact 49167070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 52455762 - 52455839
Alignment:
Q  19 aaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||| ||  || ||||||||||||||||| |||||||||||||||||||||| | | ||||||||||| ||||    
T  52455762 aaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatccctagccaaccactaggccaa 52455839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 21363010 - 21362950
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||||||||| |||||||||||||||||||||| |||  |||||||||| ||||    
T  21363010 aatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaa 21362950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 49258392 - 49258447
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactag 91  Q
    ||||||||||||||||| |||||||||||||| ||||||| ||| |||||||||||    
T  49258392 aatcgaacctgagacctctggaggagcaaactgcaagatcccaagccaaccactag 49258447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 53234040 - 53234095
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactag 91  Q
    ||||||||||||||| | |||||||||||||||||||||| ||| |||||||||||    
T  53234040 aatcgaacctgagacttctggaggagcaaactccaagatcccaagccaaccactag 53234095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 53288824 - 53288895
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccact 89  Q
    |||||||||| ||  || |||||| |||||||||||||||||||||||||| || ||| |||||||||||||    
T  53288824 gaaattggcaccagagggaatcgagcctgagacctttggaggagcaaactctaatatcccaaaccaaccact 53288895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 18176999 - 18177077
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || |||||||||||| |||| |||| |||||||||||||||||||||  |||||||||| ||||    
T  18176999 gaaattggcaccagagggaatcgaacctgatacctctggaagagcaaactccaagatctcaagtcaaccactaggccaa 18177077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 75
Target Start/End: Original strand, 29915397 - 29915438
Alignment:
Q  34 gaaatcgaacctgagacctttggaggagcaaactccaagatc 75  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  29915397 gaaatcgaacctgagacctctggaggagcaaactccaagatc 29915438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 34 - 75
Target Start/End: Original strand, 29964550 - 29964591
Alignment:
Q  34 gaaatcgaacctgagacctttggaggagcaaactccaagatc 75  Q
    ||||||||||||||||||| ||||||||||||||||||||||    
T  29964550 gaaatcgaacctgagacctctggaggagcaaactccaagatc 29964591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 51532856 - 51532807
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaac 85  Q
    |||||||| |||||||||||||| |||||||||||| |||||||||||||    
T  51532856 aatcgaacatgagacctttggagaagcaaactccaaaatctcaaaccaac 51532807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 4462700 - 4462640
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||| |||||| |||| || |||||||||||||||||||| ||||||||||| ||||    
T  4462700 aatcgaacatgagacttttgaagtagcaaactccaagatctcaagccaaccactaggccaa 4462640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 101
Target Start/End: Complemental strand, 19857136 - 19857054
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaaaccaa 101  Q
    ||||||| || ||| || ||||||||||||||| | |||||||||||||||||||||| ||| |||||||| || |||| ||||    
T  19857136 gaaattgacaccaaagggaatcgaacctgagacatctggaggagcaaactccaagatc-caagccaaccaccaggccaacccaa 19857054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 19 - 118
Target Start/End: Original strand, 31537951 - 31538045
Alignment:
Q  19 aaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaaaccaaccccaaatgggtttaaa 118  Q
    ||||||||| ||  || |||| ||| |||||||| ||||||||||||||||||||||  || |||||||||||      |||||||||||||||||||||    
T  31537951 aaattggcaccagagggaatcaaacatgagacctctggaggagcaaactccaagatcctaagccaaccactag-----gccaaccccaaatgggtttaaa 31538045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 91
Target Start/End: Complemental strand, 36660833 - 36660782
Alignment:
Q  40 gaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactag 91  Q
    ||||||||||||||  ||||||||||||||||||||  ||||||||||||||    
T  36660833 gaacctgagaccttgagaggagcaaactccaagatcctaaaccaaccactag 36660782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 1692901 - 1692863
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagat 74  Q
    ||||||||||||||||| |||||||||||||||||||||    
T  1692901 aatcgaacctgagacctctggaggagcaaactccaagat 1692863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 4252508 - 4252586
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || |||| ||| |||||||||  |||||||| ||||||||||||||| ||||||||||| ||||    
T  4252508 gaaattggcaccagagggaatcaaacttgagaccttgagaggagcacactccaagatctcaagccaaccactaggccaa 4252586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 45272528 - 45272606
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||| ||||||| | |||||||||||||||||||||| ||| ||||| ||||| ||||    
T  45272528 gaaattggcaccagagggaatcgaaactgagacatctggaggagcaaactccaagatcccaagccaacgactaggccaa 45272606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 32151491 - 32151426
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaaaccaa 101  Q
    |||||||  ||| ||||||||||||||||||||||||||| |||  |||||||||| |||| ||||    
T  32151491 aatcgaatttgaaacctttggaggagcaaactccaagatcccaagtcaaccactaggccaacccaa 32151426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 75
Target Start/End: Complemental strand, 25017582 - 25017543
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatc 75  Q
    |||||||||| ||| |||||||||||||||||||||||||    
T  25017582 aatcgaacctaagatctttggaggagcaaactccaagatc 25017543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 85
Target Start/End: Complemental strand, 26158903 - 26158836
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaac 85  Q
    |||||||||| ||| || |||  |||||||||||||  |||||||| ||||||||||||||| |||||    
T  26158903 gaaattggcaccaaagggaatgaaacctgagaccttgagaggagcacactccaagatctcaagccaac 26158836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 75
Target Start/End: Original strand, 39041982 - 39042021
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatc 75  Q
    |||||||| |||||||| ||||||||||||||||||||||    
T  39041982 aatcgaacttgagacctctggaggagcaaactccaagatc 39042021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 86
Target Start/End: Original strand, 10083949 - 10083999
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaacc 86  Q
    |||| |||||||| ||| |||||||||||||||||||||| ||| ||||||    
T  10083949 aatcaaacctgagccctctggaggagcaaactccaagatcccaagccaacc 10083999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 86
Target Start/End: Original strand, 10190872 - 10190922
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaacc 86  Q
    |||| |||||||| ||| |||||||||||||||||||||| ||| ||||||    
T  10190872 aatcaaacctgagccctctggaggagcaaactccaagatcccaagccaacc 10190922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 55371397 - 55371475
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||| || |||||||| |||||||||  ||| |||| ||||||| ||| ||| ||||||||||| ||||    
T  55371397 gaaattggcaccaaagggaatcgaacatgagaccttgagagaagcatactccaaaatcgcaagccaaccactaggccaa 55371475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 25344170 - 25344247
Alignment:
Q  19 aaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||| || ||| || |||| ||||||||| || ||||||||||||||| |||||| |||  |||||||||| ||||    
T  25344170 aaattgacaccaaagggaatcaaacctgagatctctggaggagcaaactcgaagatcccaagtcaaccactaggccaa 25344247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 34844445 - 34844396
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaac 85  Q
    ||||||||||||||||||  |||||||| |||||||| |||||| |||||    
T  34844445 aatcgaacctgagaccttgagaggagcacactccaaggtctcaagccaac 34844396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 5e-25; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 27746447 - 27746525
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||| || |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||    
T  27746447 gaaattggcaccaaagggaatcgaacctgagacctttggaggagcaaactccaagatcccaaaccaaccactaggccaa 27746525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 3734735 - 3734813
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||    
T  3734735 gaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaa 3734813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 15259518 - 15259596
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||||||||||||| |||||||||||| ||||||||| ||||||||||||||||||||    
T  15259518 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaaatccaagatcccaaaccaaccactagaccaa 15259596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 28193563 - 28193485
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  28193563 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 28193485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 34237767 - 34237845
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  34237767 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 34237845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 18532178 - 18532118
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  18532178 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 18532118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 97
Target Start/End: Complemental strand, 21603319 - 21603240
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaaa 97  Q
    |||||||||| ||  || ||||||||||||||||| ||||||||||||||| |||||| ||| ||||||||||| |||||    
T  21603319 gaaattggcaccatagggaatcgaacctgagacctctggaggagcaaactctaagatcccaagccaaccactaggccaaa 21603240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 33 - 92
Target Start/End: Complemental strand, 24018456 - 24018397
Alignment:
Q  33 ggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactaga 92  Q
    ||||||||||||| ||||||||||||||||||||||||||||| |||  |||||||||||    
T  24018456 ggaaatcgaacctcagacctttggaggagcaaactccaagatcccaagtcaaccactaga 24018397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 39349345 - 39349274
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccact 89  Q
    |||||||||| ||  || ||||||||||||||||| |||||||||||||||||||||| ||| |||||||||    
T  39349345 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccact 39349274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 4718734 - 4718656
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||||||||||||| || ||||||||||||||||||| ||| ||||||||||| ||||    
T  4718734 gaaattggcaccagagggaatcgaacctgagacctctgaaggagcaaactccaagatcccaagccaaccactaggccaa 4718656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 21667639 - 21667561
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||| ||| ||| ||||||||||||||| | |||||||||||||| |||||||||  ||| ||||||||||||||||    
T  21667639 gaaattagcaccaaaggaaatcgaacctgaaatctttggaggagcaacctccaagattccaagccaaccactagaccaa 21667561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 36 - 85
Target Start/End: Complemental strand, 2166770 - 2166721
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaac 85  Q
    ||||||||||||||||||||||| |||||||||||||||| |||||||||    
T  2166770 aatcgaacctgagacctttggagaagcaaactccaagatcccaaaccaac 2166721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 49 - 90
Target Start/End: Original strand, 9047421 - 9047462
Alignment:
Q  49 acctttggaggagcaaactccaagatctcaaaccaaccacta 90  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  9047421 acctttggaggagcaaactccaagatctcaaaccaaccacta 9047462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 19471697 - 19471620
Alignment:
Q  19 aaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||| ||  || |||| |||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  19471697 aaattggcaccagagggaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 19471620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 19542621 - 19542544
Alignment:
Q  19 aaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||| ||  || |||| |||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  19542621 aaattggcaccagagggaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 19542544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 19590075 - 19590152
Alignment:
Q  19 aaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||| ||  || |||| |||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  19590075 aaattggcaccagagggaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 19590152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 86
Target Start/End: Complemental strand, 14633043 - 14632975
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaacc 86  Q
    |||||||||| ||  || ||||||||||||||||| |||||||||||||||||||||| ||| ||||||    
T  14633043 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 14632975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 20305979 - 20305919
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||| ||||||||||||||||||||||||| |||||| ||| ||||||||||| ||||    
T  20305979 aatcgaaactgagacctttggaggagcaaactctaagatcccaagccaaccactaggccaa 20305919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 21092612 - 21092552
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||| ||||||||||||||||||||||||| |||||| ||| ||||||||||| ||||    
T  21092612 aatcgaaactgagacctttggaggagcaaactctaagatcccaagccaaccactaggccaa 21092552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 28964104 - 28964044
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||| ||| |||||  ||||||||||||| |||||||||||||||||||||||||||    
T  28964104 aatcgaacatgaaaccttaagaggagcaaactctaagatctcaaaccaaccactagaccaa 28964044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 2618275 - 2618197
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || |||||||||  |||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  2618275 gaaattggcaccagagggaatcgaacccaagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 2618197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 86
Target Start/End: Original strand, 4698853 - 4698903
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaacc 86  Q
    ||||||||||||||||| || ||||||||||||||||||| ||||||||||    
T  4698853 aatcgaacctgagacctctgaaggagcaaactccaagatcccaaaccaacc 4698903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 37 - 91
Target Start/End: Complemental strand, 8042724 - 8042670
Alignment:
Q  37 atcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactag 91  Q
    |||||||||||||| |||||||||||||||||||||||| ||| |||| ||||||    
T  8042724 atcgaacctgagacttttggaggagcaaactccaagatcccaagccaagcactag 8042670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 11714931 - 11715009
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || |||||||||||| | |||  ||| |||||||||||||||||||||||||||||||| ||||    
T  11714931 gaaattggcatcagggggaatcgaacctgaaatcttgagagaagcaaactccaagatctcaaaccaaccactaggccaa 11715009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 32879368 - 32879290
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||||||||||||| ||||||| ||||||| |||||| |||  |||||||||||||||    
T  32879368 gaaattggcaccagagggaatcgaacctgagacctctggaggaccaaactcgaagatcccaagtcaaccactagaccaa 32879290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 264529 - 264589
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||||||| || ||||||||||||||| |||||| ||| ||||||||||| ||||    
T  264529 aatcgaacctgagatctctggaggagcaaactcgaagatcccaagccaaccactaggccaa 264589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 651392 - 651332
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||||||| || ||||||||||||||| |||||| ||| ||||||||||| ||||    
T  651392 aatcgaacctgagatctctggaggagcaaactcgaagatcccaagccaaccactaggccaa 651332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 837127 - 837067
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||||||| || ||||||||||||||| |||||| ||| ||||||||||| ||||    
T  837127 aatcgaacctgagatctctggaggagcaaactcgaagatcccaagccaaccactaggccaa 837067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 20469988 - 20469940
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaa 84  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| ||||    
T  20469988 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaa 20469940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 34694706 - 34694766
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| |||||||  |||||||||||||||||||| |||  |||||||||||||||    
T  34694706 aatcgaacctaagaccttgagaggagcaaactccaagatcacaagtcaaccactagaccaa 34694766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 42643248 - 42643308
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||| ||||||||| |||||||||||||||||||||| |||  |||||||||| ||||    
T  42643248 aatcgaatctgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaa 42643308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 33 - 96
Target Start/End: Original strand, 33585754 - 33585817
Alignment:
Q  33 ggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||||||| || ||  |||||||| |||| |||||||||||||||||||||| ||||    
T  33585754 ggaaatcgaacctgaaactttgagaggagcacactctaagatctcaaaccaaccactaggccaa 33585817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 84
Target Start/End: Original strand, 8765638 - 8765704
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaa 84  Q
    |||||||||| ||  || |||||||||||||| || ||| |||||||||||||||||||||| ||||    
T  8765638 gaaattggcaccagagggaatcgaacctgagatctctgggggagcaaactccaagatctcaagccaa 8765704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 7558056 - 7558133
Alignment:
Q  19 aaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||| ||  |||||||||| ||||||| | |||||||||||||||||||||| ||| | ||| ||||| ||||    
T  7558056 aaattggcaccagaggaaatcgaatctgagacttctggaggagcaaactccaagatcccaagctaactactaggccaa 7558133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 26168978 - 26169038
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||| |||||||||||||  |||||||||||||||||||| ||| | ||||||||| ||||    
T  26168978 aatcaaacctgagaccttgagaggagcaaactccaagatcccaagcaaaccactaggccaa 26169038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 37 - 93
Target Start/End: Original strand, 34639337 - 34639393
Alignment:
Q  37 atcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagac 93  Q
    ||||| |||||||||||  |||||||| ||||||||||| ||| |||||||||||||    
T  34639337 atcgagcctgagaccttgagaggagcacactccaagatcccaagccaaccactagac 34639393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 42328093 - 42328016
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || |||| ||||||| |||| |||||||| ||||||||||||| ||| ||||||||||| ||||    
T  42328093 gaaattggcaacagagggaatcaaacctgacacctctggaggag-aaactccaagatcccaagccaaccactaggccaa 42328016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 8387557 - 8387634
Alignment:
Q  19 aaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||| ||  ||||||||||| ||||||| |  ||| ||||||||| ||||||||||  |||||||||| ||||    
T  8387557 aaattggcaccagaggaaatcgaacttgagaccctgagagaagcaaactctaagatctcaagacaaccactaggccaa 8387634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 22200690 - 22200742
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccac 88  Q
    ||||||||||||||| ||  ||| || ||||||||||||| ||||||||||||    
T  22200690 aatcgaacctgagactttgagagaagtaaactccaagatcccaaaccaaccac 22200742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 28088375 - 28088303
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccacta 90  Q
    ||||||| || ||| || ||||||| ||||||||| |||| || |||||||||||||| |||  |||||||||    
T  28088375 gaaattgacaccaaagggaatcgaatctgagacctctggatgaacaaactccaagatcccaagtcaaccacta 28088303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 56 - 96
Target Start/End: Complemental strand, 28908872 - 28908832
Alignment:
Q  56 gaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||||||||| ||  ||||||||||||||||||||    
T  28908872 gaggagcaaactccaaaattccaaaccaaccactagaccaa 28908832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 55; Significance: 1e-22; HSPs: 37)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 44946165 - 44946243
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||| || ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||    
T  44946165 gaaattggcaccaaagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaa 44946243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 36 - 86
Target Start/End: Complemental strand, 5394084 - 5394034
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaacc 86  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  5394084 aatcgaacctgagacctttggaggagcaaactccaagatctcaagccaacc 5394034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 15038044 - 15037966
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||| || |||||||||||||||||||||||||||||||||||||||| | |  |||||||||| ||||    
T  15038044 gaaattggcaccaaagggaatcgaacctgagacctttggaggagcaaactccaagatcccgagtcaaccactaggccaa 15037966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 17324851 - 17324773
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||||||||||||| |||||||||||||||||||||  ||||||||||||||| ||||    
T  17324851 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagataccaaaccaaccactaggccaa 17324773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 41314059 - 41314005
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccacta 90  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||    
T  41314059 aatcgaacctgagacctctggaggagcaaactccaagatcccaaaccaaccacta 41314005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 11941323 - 11941400
Alignment:
Q  19 aaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||| ||  || ||| ||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||    
T  11941323 aaattggcaccatagggaattgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaa 11941400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 19849900 - 19849847
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccact 89  Q
    |||||||| | |||||||||||||||||||||||||||||||||||||||||||    
T  19849900 aatcgaacttaagacctttggaggagcaaactccaagatctcaaaccaaccact 19849847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 27290673 - 27290600
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactag 91  Q
    |||||||||| | | || ||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||    
T  27290673 gaaattggcaccgaagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactag 27290600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 10582102 - 10582174
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccacta 90  Q
    |||||||||| ||  || ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||    
T  10582102 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccacta 10582174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 36390680 - 36390756
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  |||||||||||||||||||||||||| |||||||||  ||||| ||||||||||||||| ||||    
T  36390680 gaaattggcaccagaggaaatcgaacctgagacctttggagaagcaaactc--agatcccaaaccaaccactaggccaa 36390756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 25293251 - 25293173
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||||||||||||| | |||||||||||||||||||| |||  |||||||||||||||    
T  25293251 gaaattggcaccagagggaatcgaacctgagacctctcgaggagcaaactccaagatcccaagtcaaccactagaccaa 25293173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 33827685 - 33827763
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||||||||||||| ||||||||||| |||||||||| ||| ||||||||||| ||||    
T  33827685 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaatctccaagatcccaagccaaccactaggccaa 33827763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 37 - 87
Target Start/End: Complemental strand, 44610140 - 44610090
Alignment:
Q  37 atcgaacctgagacctttggaggagcaaactccaagatctcaaaccaacca 87  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  44610140 atcgaacctgagacctttggaagagcaaactccaagatctcaagccaacca 44610090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 44976267 - 44976344
Alignment:
Q  19 aaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||| ||  || ||||||||||||||||| ||||||||||||| |||||||| ||| ||||||||||| ||||    
T  44976267 aaattggcaccagagggaatcgaacctgagacctctggaggagcaaaccccaagatcccaagccaaccactaggccaa 44976344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 6714411 - 6714471
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||| |||||||||||| |||||||||||||||||||||||||| ||||||| ||| ||||    
T  6714411 aatcaaacctgagacctctggaggagcaaactccaagatctcaagccaaccattaggccaa 6714471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 18976555 - 18976615
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||| |||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  18976555 aatcgaacatgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 18976615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 39 - 86
Target Start/End: Complemental strand, 1191577 - 1191530
Alignment:
Q  39 cgaacctgagacctttggaggagcaaactccaagatctcaaaccaacc 86  Q
    |||||||||||||| |||||||||||||||||||||||||| ||||||    
T  1191577 cgaacctgagacctctggaggagcaaactccaagatctcaagccaacc 1191530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 4852625 - 4852570
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactag 91  Q
    |||||||||||||||||||||||||||||||||||||||  |||  ||||||||||    
T  4852625 aatcgaacctgagacctttggaggagcaaactccaagattccaagtcaaccactag 4852570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 87
Target Start/End: Complemental strand, 8258964 - 8258913
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaacca 87  Q
    ||||||||||||||| | |||||||||||||||||||||||||||| |||||    
T  8258964 aatcgaacctgagacatctggaggagcaaactccaagatctcaaactaacca 8258913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 19054092 - 19054037
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactag 91  Q
    |||| ||||||||||||||||||||||| ||||||||||||||| |||| ||||||    
T  19054092 aatcaaacctgagacctttggaggagcagactccaagatctcaagccaatcactag 19054037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 30466942 - 30467020
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||||||  |  ||||||||||||||||| | ||||| |||||||||| ||| ||||||||||||||| ||||    
T  30466942 gaaattggcagcagagagaatcgaacctgagacctctagaggaacaaactccaatatcccaaaccaaccactaggccaa 30467020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 40 - 94
Target Start/End: Original strand, 40997484 - 40997538
Alignment:
Q  40 gaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagacc 94  Q
    |||| ||||||||||||||||||||||||||||||| |||  |||||||||||||    
T  40997484 gaacatgagacctttggaggagcaaactccaagatcccaagtcaaccactagacc 40997538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 41329927 - 41329850
Alignment:
Q  19 aaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||| ||  || ||||||| |||| |||||||||||||||||||| |||||| ||||| ||||||||| ||||    
T  41329927 aaattggcaccagagggaatcgaatctgaaacctttggaggagcaaactctaagatcccaaactaaccactaggccaa 41329850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 8192481 - 8192541
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||||||||||  |||||||| ||||||||||| ||| ||||||||||| ||||    
T  8192481 aatcgaacctgagaccttgagaggagcacactccaagatcccaagccaaccactaggccaa 8192541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 43374437 - 43374505
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaacc 86  Q
    |||||||||| ||  || ||||||||||||||||| || ||||||||||||||||||| ||| ||||||    
T  43374437 gaaattggcaccagagggaatcgaacctgagacctctgaaggagcaaactccaagatcccaagccaacc 43374505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 34516538 - 34516589
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaacca 87  Q
    |||||||||||| |||| |||||||||||||||||||||| ||| |||||||    
T  34516538 aatcgaacctgaaacctctggaggagcaaactccaagatcccaagccaacca 34516589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 4567549 - 4567627
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  |||||||||||||||||| | || ||||||||||| ||||||| ||| ||||| ||||| ||||    
T  4567549 gaaattggcaccagaggaaatcgaacctgagacttctgaaggagcaaacttcaagatcccaagccaactactaggccaa 4567627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 4618797 - 4618875
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  ||||||||||||||| |||||  |||||||| ||||||||||  ||| ||||||||||| ||||    
T  4618797 gaaattggcaccaggggaaatcgaacctgaaaccttgagaggagcatactccaagattccaagccaaccactaggccaa 4618875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 32526215 - 32526269
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccacta 90  Q
    ||||||||||||||||||  |||||||||||| ||||||| |||| |||||||||    
T  32526215 aatcgaacctgagaccttgagaggagcaaacttcaagatcccaaatcaaccacta 32526269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 32845176 - 32845098
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || |||||||||||| || |||||||||||||||||||||||| ||| | ||| ||||| ||||    
T  32845176 gaaattggcaccagagggaatcgaacctgaaacttttggaggagcaaactccaagatcccaagctaactactaggccaa 32845098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 23787120 - 23787193
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactag 91  Q
    |||||||||| ||  || |||| ||||||||||||||| || |||||| ||||| || ||||||||||||||||    
T  23787120 gaaattggcaccagagggaatcaaacctgagacctttgtagaagcaaattccaaaatttcaaaccaaccactag 23787193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 35171867 - 35171831
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaag 72  Q
    ||||||||||||||||| |||||||||||||||||||    
T  35171867 aatcgaacctgagacctctggaggagcaaactccaag 35171831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 19605975 - 19606030
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactag 91  Q
    ||||||||||||||||||  |||||||  ||||||||||| ||| |||||||||||    
T  19605975 aatcgaacctgagaccttgagaggagcgcactccaagatcccaagccaaccactag 19606030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 84
Target Start/End: Complemental strand, 29361623 - 29361573
Alignment:
Q  33 ggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaa 84  Q
    ||||||||| ||||||| ||||||||||||||||||||||||| ||| ||||    
T  29361623 ggaaatcga-cctgagatctttggaggagcaaactccaagatcccaatccaa 29361573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 86
Target Start/End: Original strand, 36242442 - 36242492
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaacc 86  Q
    ||||||||||||||||| |||||||||||| | ||||||| ||| ||||||    
T  36242442 aatcgaacctgagacctctggaggagcaaatttcaagatcccaagccaacc 36242492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 14946847 - 14946786
Alignment:
Q  35 aaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||| | |||||  |||||||||||| |||||||||||  |||||||||| ||||    
T  14946847 aaatcgaacctaaaaccttgagaggagcaaacttcaagatctcaagtcaaccactaggccaa 14946786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 24196071 - 24196011
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||||| |||| ||||||||| ||| |||| ||| ||| ||||||||||| ||||    
T  24196071 aatcgaacctgaaacctctggaggagcgaaccccaaaatcccaagccaaccactaggccaa 24196011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 53; Significance: 2e-21; HSPs: 40)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 43719195 - 43719255
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||    
T  43719195 aatcgaacctgaaacctctggaggagcaaactccaagatctcaaaccaaccactagaccaa 43719255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 25852299 - 25852221
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||    
T  25852299 gaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaa 25852221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 52983704 - 52983626
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| ||||    
T  52983704 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatctcaagccaaccactaggccaa 52983626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 96
Target Start/End: Complemental strand, 46714462 - 46714399
Alignment:
Q  33 ggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  46714462 ggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 46714399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 1985921 - 1985843
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||| ||| ||| || ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  1985921 gaaattcgcaccaaagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 1985843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 101
Target Start/End: Complemental strand, 35229235 - 35229170
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaaaccaa 101  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| |||| ||||    
T  35229235 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacccaa 35229170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 36 - 89
Target Start/End: Complemental strand, 49287925 - 49287872
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccact 89  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||||||||||    
T  49287925 aatcgaacctgagacctctggaggagcaaactccaagatcccaaaccaaccact 49287872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 86
Target Start/End: Original strand, 7392075 - 7392143
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaacc 86  Q
    |||||||||| ||  || |||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  7392075 gaaattggcaccatagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaacc 7392143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 18 - 90
Target Start/End: Original strand, 27528907 - 27528979
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccacta 90  Q
    |||||||||| ||  || ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||    
T  27528907 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccacta 27528979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 34844888 - 34844948
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||||||||| |||||||||||||||||||||||||| | ||||||||| ||||    
T  34844888 aatcgaacctgagacctctggaggagcaaactccaagatctcaagcaaaccactaggccaa 34844948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 54127476 - 54127532
Alignment:
Q  40 gaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||    
T  54127476 gaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaa 54127532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 33992693 - 33992638
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactag 91  Q
    |||||||||| |||||| |||||||||||||||||||||| |||||||||||||||    
T  33992693 aatcgaacctaagacctctggaggagcaaactccaagatcccaaaccaaccactag 33992638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 13873407 - 13873485
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || |||||||||||||||||||| ||||||||||||||||||| ||| | ||||||||| ||||    
T  13873407 gaaattggcaccagagggaatcgaacctgagacctttgaaggagcaaactccaagatcccaagcaaaccactaggccaa 13873485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 32986282 - 32986204
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||| ||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  32986282 gaaattggcaccagagggaattgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 32986204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 33696391 - 33696469
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||| ||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  33696391 gaaattggcaccagagggaattgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 33696469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 51535697 - 51535620
Alignment:
Q  19 aaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||| ||  || ||||||||||||||||| |||||||||||||||||||||| |||  |||||||||| ||||    
T  51535697 aaattggcaccagagggaatcgaacctgagacctgtggaggagcaaactccaagatcccaagtcaaccactaggccaa 51535620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 19660662 - 19660722
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||| |||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  19660662 aatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 19660722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 22625200 - 22625260
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||||||||| |||||||| ||||||||||||| ||| ||||||||||| ||||    
T  22625200 aatcgaacctgagacctctggaggagtaaactccaagatcccaagccaaccactaggccaa 22625260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 32942437 - 32942377
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| | |||| |||||||| ||||||||||||||||| ||||||||||||||||    
T  32942437 aatcgaaccttaaacctctggaggagtaaactccaagatctcaagccaaccactagaccaa 32942377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 40058982 - 40059042
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||||||||| | |||||||||||||||||||| ||| ||||||||||| ||||    
T  40058982 aatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactaggccaa 40059042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 20078096 - 20078163
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaac 85  Q
    |||||||||| || ||| |||| |||||||||||| |||||||||||||||||||||| ||| |||||    
T  20078096 gaaattggcaccagtgggaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaac 20078163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 2351098 - 2351020
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||||||||||||| |||||||||||||| ||||||  ||| ||||||||||| ||||    
T  2351098 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaacttcaagattccaagccaaccactaggccaa 2351020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 35674871 - 35674924
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccact 89  Q
    ||||||||||| |||||||||| ||||||||||||||||| ||| |||||||||    
T  35674871 aatcgaacctgtgacctttggaagagcaaactccaagatcccaagccaaccact 35674924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 41621709 - 41621786
Alignment:
Q  19 aaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||| ||  ||||||| ||| |||||||||  |||||||||||||||||||||||| ||||||| ||| ||||    
T  41621709 aaattggcaccagaggaaatcaaacatgagaccttgagaggagcaaactccaagatctcaagccaaccattaggccaa 41621786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 13584384 - 13584444
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||| |||||| |||||||||||||||||||| ||||||  ||||||||||| ||||    
T  13584384 aatcgaacttgagacttttggaggagcaaactccaatatctcaggccaaccactaggccaa 13584444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 34835596 - 34835536
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||| |||||||||  ||||||||||||| |||||| ||| ||||||||||||||||    
T  34835596 aatcgaacatgagaccttaagaggagcaaactctaagatcccaagccaaccactagaccaa 34835536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 12710246 - 12710191
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactag 91  Q
    ||||||||||||||||||  ||| |||| ||||||||||| |||||||||||||||    
T  12710246 aatcgaacctgagaccttaagagaagcatactccaagatcccaaaccaaccactag 12710191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 20566435 - 20566356
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgag-acctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||||||||  |||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  20566435 gaaattggcaccagagggaatcgaacctgatcacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 20566356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 12500170 - 12500227
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatc 75  Q
    |||||||||| ||  || |||| ||||||||||||||| |||||||||||||||||||    
T  12500170 gaaattggcaccagagggaatcaaacctgagacctttgaaggagcaaactccaagatc 12500227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 47 - 96
Target Start/End: Original strand, 55961883 - 55961932
Alignment:
Q  47 agacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  55961883 agacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 55961932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 5609332 - 5609392
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||||||||  || | ||||||||||||||||| ||| ||||||||||| ||||    
T  5609332 aatcgaacctgagaccactgaatgagcaaactccaagatcccaagccaaccactaggccaa 5609392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 42245813 - 42245753
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||| ||||||||| ||||||||||||| |||||| |||  |||||||||| ||||    
T  42245813 aatcgaacccgagacctttagaggagcaaactctaagatcccaagtcaaccactaggccaa 42245753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 43352454 - 43352514
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||||||  |||  ||||||||||||||| |||||||| ||||||| ||||||||    
T  43352454 aatcgaacctgagttcttgagaggagcaaactccatgatctcaagccaaccattagaccaa 43352514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 45787816 - 45787893
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || |||||||||||||| || |||||||||||| ||||||||  ||| ||||||||||| ||||    
T  45787816 gaaattggcatcagagggaatcgaacctgagatctctggaggagcaaa-tccaagattccaagccaaccactaggccaa 45787893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 13550268 - 13550215
Alignment:
Q  43 cctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| | |||||||||||||| |||||||||  |||||||||| ||||    
T  13550268 cctgagacctctagaggagcaaactcccagatctcaagtcaaccactaggccaa 13550215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 20527163 - 20527212
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaac 85  Q
    |||| ||| |||||||| ||||||| |||||||||| |||||||||||||    
T  20527163 aatcaaacttgagacctctggaggaacaaactccaaaatctcaaaccaac 20527212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 44343581 - 44343520
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaacc-aaccactagaccaa 96  Q
    |||||||| |||| ||||||| |||||||||||||||||| ||| || ||||||||| ||||    
T  44343581 aatcgaacttgagtcctttgggggagcaaactccaagatcccaagccaaaccactagcccaa 44343520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 60 - 93
Target Start/End: Complemental strand, 45302882 - 45302849
Alignment:
Q  60 agcaaactccaagatctcaaaccaaccactagac 93  Q
    |||||||||||||||||||||||||||| |||||    
T  45302882 agcaaactccaagatctcaaaccaaccattagac 45302849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 9646346 - 9646406
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||| ||| |||||||||   ||||||| |||| |||||| ||||||||||||||||||||    
T  9646346 aatcaaacatgagaccttgacaggagcacactcaaagatcccaaaccaaccactagaccaa 9646406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 54 - 90
Target Start/End: Complemental strand, 34722219 - 34722183
Alignment:
Q  54 tggaggagcaaactccaagatctcaaaccaaccacta 90  Q
    |||||||||||||||||||||| ||| ||||||||||    
T  34722219 tggaggagcaaactccaagatcccaagccaaccacta 34722183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 52; Significance: 8e-21; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 33 - 96
Target Start/End: Complemental strand, 40332173 - 40332110
Alignment:
Q  33 ggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||    
T  40332173 ggaaatcgaacctgagacctttagaggagcaaactccaagatttcaagccaaccactagaccaa 40332110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 2751360 - 2751282
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||    
T  2751360 gaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaa 2751282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 27704091 - 27704013
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||| |||||||||||||||||||| || ||||||||||| ||||||||||| ||||||||| ||||||    
T  27704091 gaaattggcaccaaaggaaatcgaacctgagacctctgtaggagcaaacttcaagatctcaagccaaccactggaccaa 27704013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 10091259 - 10091199
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||    
T  10091259 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaa 10091199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 7175974 - 7176052
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  7175974 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 7176052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 7275366 - 7275288
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  7275366 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 7275288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 21217945 - 21218023
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  21217945 gaaattggcatcagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 21218023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 22119977 - 22119899
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  22119977 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 22119899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 40543022 - 40543100
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  40543022 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 40543100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 7799944 - 7800017
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactag 91  Q
    |||||||||| ||  || ||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||    
T  7799944 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactag 7800017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 17197062 - 17197135
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactag 91  Q
    |||||||||| ||  || |||||||| |||||||| |||||||||||||||||||||| |||||||||||||||    
T  17197062 gaaattggcaccagagggaatcgaacttgagacctatggaggagcaaactccaagatcgcaaaccaaccactag 17197135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 2103126 - 2103066
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  2103126 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 2103066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 23854467 - 23854407
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  23854467 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 23854407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 28089886 - 28089827
Alignment:
Q  37 atcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||||||| | |||||||||||||||||||||||||| ||||||||||| ||||    
T  28089886 atcgaacctgagacatctggaggagcaaactccaagatctcaagccaaccactaggccaa 28089827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 11997938 - 11997860
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||||||||||||| | |||||||||||||||||||| ||| ||||||||||| ||||    
T  11997938 gaaattggcaccagagggaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactagcccaa 11997860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 22703557 - 22703503
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccacta 90  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||    
T  22703557 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccacta 22703503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 34 - 96
Target Start/End: Original strand, 42913641 - 42913703
Alignment:
Q  34 gaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||||||||||| | |||||||||||||||||||| ||| ||||||||||| ||||    
T  42913641 gaaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactaggccaa 42913703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 21835240 - 21835167
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactag 91  Q
    |||||||||| ||  || |||||||||||||| || |||||||||||||||||||||| ||| |||||||||||    
T  21835240 gaaattggcaccagagggaatcgaacctgagatctctggaggagcaaactccaagatcccaagccaaccactag 21835167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 22299938 - 22299865
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactag 91  Q
    |||||||||| ||  || |||||||| |||||||| |||||||||||||||||||||| ||| |||||||||||    
T  22299938 gaaattggcaccagagggaatcgaacttgagacctctggaggagcaaactccaagatcccaagccaaccactag 22299865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 2344370 - 2344310
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||| |||||| ||||||||||||||||||||||||| ||| ||||||||||| ||||    
T  2344370 aatcgaatctgagagctttggaggagcaaactccaagatcccaagccaaccactaggccaa 2344310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 18044178 - 18044118
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||| ||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  18044178 aatcgaacctgggacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 18044118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 34 - 90
Target Start/End: Complemental strand, 19421304 - 19421248
Alignment:
Q  34 gaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccacta 90  Q
    ||||||||||||||||||| | |||||||||||||||||||| ||| ||||||||||    
T  19421304 gaaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccacta 19421248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 22638363 - 22638303
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||||||||||||| | |||||||||| ||||||||||  |||||||||||||||    
T  22638363 aatcgaacctgagacctttgaaagagcaaactctaagatctcaagtcaaccactagaccaa 22638303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 40 - 115
Target Start/End: Complemental strand, 17212120 - 17212050
Alignment:
Q  40 gaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaaaccaaccccaaatgggttt 115  Q
    ||||||||||||| |||||||||||||||||||||| ||| |||||||||     || ||||||||||||||||||    
T  17212120 gaacctgagacctctggaggagcaaactccaagatcccaagccaaccact-----aagccaaccccaaatgggttt 17212050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 37 - 116
Target Start/End: Complemental strand, 25333489 - 25333415
Alignment:
Q  37 atcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaaaccaaccccaaatgggttta 116  Q
    |||||||||||||||| ||||| |||||||||||||||| ||| |||||||||     || |||||||||||||||||||    
T  25333489 atcgaacctgagacctctggagaagcaaactccaagatcccaagccaaccact-----aagccaaccccaaatgggttta 25333415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 33 - 96
Target Start/End: Original strand, 31713022 - 31713085
Alignment:
Q  33 ggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||| | |||||||||| | |||||||||||||||||||| ||||||||||||||| ||||    
T  31713022 ggaaatcaatcctgagacctctcgaggagcaaactccaagatcccaaaccaaccactaggccaa 31713085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 9718117 - 9718177
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||| |||||| |||||||||||||||||||| ||||||  ||||||||||| ||||    
T  9718117 aatcgaacttgagacttttggaggagcaaactccaatatctcaggccaaccactaggccaa 9718177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 13332553 - 13332613
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||| |||||||||||  ||||||||||||||||||||| ||| ||||||||||| ||||    
T  13332553 aatcgtacctgagacctcaggaggagcaaactccaagatcccaagccaaccactaggccaa 13332613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 21370668 - 21370608
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||||||| | || ||||| ||||||||||||| ||||||||||||||| ||||    
T  21370668 aatcgaacctgagacatctgaaggagtaaactccaagatcccaaaccaaccactaggccaa 21370608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 27312223 - 27312163
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||||| |||| | |||||||||||||||||||| ||| ||||||||||| ||||    
T  27312223 aatcgaacctgaaacctctagaggagcaaactccaagatcccaagccaaccactaggccaa 27312163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 31197662 - 31197602
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||| |||||||||| | |||| ||||||||||||||||| ||| ||||||||||||||||    
T  31197662 aatcaaacctgagacatctggatgagcaaactccaagatcccaagccaaccactagaccaa 31197602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 37 - 96
Target Start/End: Complemental strand, 27009429 - 27009370
Alignment:
Q  37 atcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||||||||| |||| |||||||||||||||||  || ||||||||||| ||||    
T  27009429 atcgaacctgagacctctggatgagcaaactccaagatccgaagccaaccactaggccaa 27009370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 99
Target Start/End: Original strand, 37693692 - 37693755
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaaacc 99  Q
    ||||||||||||||| ||  |||||||| ||||||||||| ||||||||| ||||||| |||||    
T  37693692 aatcgaacctgagacattaagaggagcacactccaagatcccaaaccaacaactagactaaacc 37693755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 1469201 - 1469123
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||  || |||||||||||||||||||||  || || ||||||||||||| ||||  |||||||||| ||||    
T  1469201 gaaattggcattaaaggaaatcgaacctgagaccttgagatgaacaaactccaagatttcaagtcaaccactaggccaa 1469123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 8435807 - 8435885
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  ||||||||||||| ||| |||   ||||||||||||||||||| |||  |||||||||||||||    
T  8435807 gaaattggcaccagaggaaatcgaacctaagatcttcaaaggagcaaactccaagatcccaagtcaaccactagaccaa 8435885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 22696409 - 22696331
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || |||| |||||||||||||  |||||||| ||||||||||| |||| |||||||||| ||||    
T  22696409 gaaattggcaccagagggaatcaaacctgagaccttgagaggagcacactccaagatcccaaatcaaccactaggccaa 22696331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 14199796 - 14199848
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccac 88  Q
    ||||||||||||||||| |||||||| ||||||||||||  |||| |||||||    
T  14199796 aatcgaacctgagacctctggaggaggaaactccaagattccaaatcaaccac 14199848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 21574233 - 21574293
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||| ||||||  |||||||| ||||||| ||| ||||||||||||||| ||||    
T  21574233 aatcgaacctgtgaccttgagaggagcacactccaaaatcccaaaccaaccactaggccaa 21574293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 37056303 - 37056231
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccacta 90  Q
    |||||||||| ||  |||||||||| || | |||||  |||||||| ||||||||||| ||||||||||||||    
T  37056303 gaaattggcaccagaggaaatcgaatctcaaaccttgagaggagcacactccaagatcacaaaccaaccacta 37056231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 18 - 65
Target Start/End: Original strand, 654816 - 654863
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaa 65  Q
    |||||||||| ||  || ||||||||||||||||||||||||||||||    
T  654816 gaaattggcaccagagggaatcgaacctgagacctttggaggagcaaa 654863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 92
Target Start/End: Complemental strand, 28003902 - 28003851
Alignment:
Q  41 aacctgagacctttggaggagcaaactccaagatctcaaaccaaccactaga 92  Q
    ||||| |||| | |||||||||||||||||||||| ||| ||||||||||||    
T  28003902 aacctaagacttctggaggagcaaactccaagatcccaagccaaccactaga 28003851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 32849662 - 32849607
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactag 91  Q
    |||| |||| ||||||| |||||||||||||||||||||| |||  ||||||||||    
T  32849662 aatcaaacccgagacctctggaggagcaaactccaagatcccaagtcaaccactag 32849607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 43785429 - 43785480
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaacca 87  Q
    |||||||| |||||||||||||||||||| ||| |||||| ||| |||||||    
T  43785429 aatcgaacttgagacctttggaggagcaatctcaaagatcccaagccaacca 43785480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 12211647 - 12211725
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  ||||||| ||||||||| |||  |||||||| |||||||||||  || ||||||||||| ||||    
T  12211647 gaaattggcaccagaggaaatcaaacctgagatcttgagaggagcacactccaagatcctaagccaaccactaggccaa 12211725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 86
Target Start/End: Original strand, 22264632 - 22264682
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaacc 86  Q
    ||||||| ||||||||||  |||||||||||||||||||  ||||||||||    
T  22264632 aatcgaatctgagaccttgagaggagcaaactccaagattccaaaccaacc 22264682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 33 - 75
Target Start/End: Original strand, 36772429 - 36772471
Alignment:
Q  33 ggaaatcgaacctgagacctttggaggagcaaactccaagatc 75  Q
    ||||||| |||||||||||| | ||||||||||||||||||||    
T  36772429 ggaaatcaaacctgagacctctagaggagcaaactccaagatc 36772471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 38 - 96
Target Start/End: Complemental strand, 42031988 - 42031930
Alignment:
Q  38 tcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||| |||||||||  ||||| ||||||| ||| || ||||||||||||||||||||    
T  42031988 tcgaacgtgagaccttaagaggaacaaactctaaggtcccaaaccaaccactagaccaa 42031930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 43 - 96
Target Start/End: Complemental strand, 9683890 - 9683837
Alignment:
Q  43 cctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| | |||||||||||||| |||||||||  |||||||||| ||||    
T  9683890 cctgagacctctagaggagcaaactcccagatctcaagtcaaccactaggccaa 9683837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 23012638 - 23012691
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccact 89  Q
    |||| ||||| |||||| ||||| |||||||||||||||| ||| |||||||||    
T  23012638 aatcaaacctaagacctctggagaagcaaactccaagatcccaagccaaccact 23012691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 39145764 - 39145837
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactag 91  Q
    |||||||||| ||  || |||||||||  |||| | |||||||||||||||||||||| |||  ||||||||||    
T  39145764 gaaattggcaccacagggaatcgaaccgaagacatctggaggagcaaactccaagatcccaagtcaaccactag 39145837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 52; Significance: 8e-21; HSPs: 49)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 31288058 - 31288141
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaaaccaa 101  Q
    |||||||||| ||| || |||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||| |||| ||||    
T  31288058 gaaattggcaccaaagggaatcgaacatgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaacccaa 31288141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 25587017 - 25586939
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  |||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  25587017 gaaattggcaccagaggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 25586939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 13038567 - 13038644
Alignment:
Q  19 aaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||| ||  || ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  13038567 aaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaaaccaaccactaggccaa 13038644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 32059570 - 32059630
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||    
T  32059570 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaa 32059630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 19 - 91
Target Start/End: Complemental strand, 37495131 - 37495059
Alignment:
Q  19 aaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactag 91  Q
    ||||||||| ||  || ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  37495131 aaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatctcaagccaaccactag 37495059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 1827660 - 1827715
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactag 91  Q
    ||||||||||||||||| |||||||||||||||||||||||||| |||||||||||    
T  1827660 aatcgaacctgagacctctggaggagcaaactccaagatctcaagccaaccactag 1827715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 11926614 - 11926692
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || |||| |||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  11926614 gaaattggcaccagagggaatctaacctgagacctctggaggagcaaactccaagatcccaaaccaaccactaggccaa 11926692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 11465020 - 11465097
Alignment:
Q  19 aaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||| ||  |||||||||||||||||| ||||||||||||||||||||||| |||| |||| |||||| ||||    
T  11465020 aaattggcaccagaggaaatcgaacctgagacatttggaggagcaaactccaagatttcaagccaatcactaggccaa 11465097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 33 - 90
Target Start/End: Original strand, 15971249 - 15971306
Alignment:
Q  33 ggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccacta 90  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||    
T  15971249 ggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccacta 15971306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 22392768 - 22392708
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  22392768 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 22392708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 37397780 - 37397720
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||| ||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  37397780 aatcaaaccttagacctttggaggagcaaactccaagatcacaagccaaccactagaccaa 37397720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 36 - 91
Target Start/End: Original strand, 15641235 - 15641290
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactag 91  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||    
T  15641235 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactag 15641290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 33 - 96
Target Start/End: Original strand, 23270649 - 23270712
Alignment:
Q  33 ggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||| ||||||||||||| ||||||||||||||||| ||| ||||||||||| ||||    
T  23270649 ggaaatcgaacttgagacctttggatgagcaaactccaagatcccaagccaaccactaggccaa 23270712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 18 - 101
Target Start/End: Original strand, 33709613 - 33709696
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaaaccaa 101  Q
    |||||||||| ||  || |||||||| |||||||| |||||||||||||||||||||| ||| ||||||||||| |||| ||||    
T  33709613 gaaattggcaccagagggaatcgaacttgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaacccaa 33709696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 8484773 - 8484851
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || |||| |||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  8484773 gaaattggcaccagagggaatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 8484851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 36 - 86
Target Start/End: Original strand, 12398578 - 12398628
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaacc 86  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||||    
T  12398578 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaacc 12398628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 38631073 - 38631151
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||| ||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  38631073 gaaattggcaccagagggaatcgaatctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 38631151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 96
Target Start/End: Original strand, 13108562 - 13108639
Alignment:
Q  19 aaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||| ||  || |||||||||||||| || |||||||||||||||||||||| ||| ||||||||||| ||||    
T  13108562 aaattggcaccagagggaatcgaacctgagatctctggaggagcaaactccaagatcccaagccaaccactaggccaa 13108639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 4603844 - 4603784
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||| ||||| ||||||||||||||||||||||||| ||| ||||||||||| ||||    
T  4603844 aatcgaacttgagatctttggaggagcaaactccaagatcccaagccaaccactaggccaa 4603784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 10869695 - 10869747
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccac 88  Q
    |||||||||||||||||||||||||||||||||||||||| |||  |||||||    
T  10869695 aatcgaacctgagacctttggaggagcaaactccaagatcgcaagtcaaccac 10869747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 18207274 - 18207226
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaa 84  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||    
T  18207274 aatcgaacctgagacctctggaggagcaaactccaagatcccaaaccaa 18207226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 34049889 - 34049829
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| ||||| ||||| ||||    
T  34049889 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaactactagcccaa 34049829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 89
Target Start/End: Complemental strand, 38684293 - 38684222
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccact 89  Q
    |||||||||| ||  || ||||||||||||||||| |||||||||||||||||||||| |||  ||||||||    
T  38684293 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccact 38684222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 19 - 117
Target Start/End: Complemental strand, 34310226 - 34310133
Alignment:
Q  19 aaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaaaccaaccccaaatgggtttaa 117  Q
    ||||||||| ||  || ||||||||||||||||| |||||||||||||||||||||  ||| || ||||||||      ||||||||||||||||||||    
T  34310226 aaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagattccaagccgaccactag-----gccaaccccaaatgggtttaa 34310133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 42193570 - 42193492
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  |||||||||||||||||||| ||| | |||||||||||||||| |||  |||||||||| ||||    
T  42193570 gaaattggcatcagaggaaatcgaacctgagacctctggggaagcaaactccaagatcccaagtcaaccactaggccaa 42193492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 5067369 - 5067308
Alignment:
Q  35 aaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||||||| || ||||||||||||||| |||||| |||  |||||||||||||||    
T  5067369 aaatcgaacctgagatctctggaggagcaaactcgaagatcccaagtcaaccactagaccaa 5067308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 37 - 86
Target Start/End: Original strand, 19456340 - 19456389
Alignment:
Q  37 atcgaacctgagacctttggaggagcaaactccaagatctcaaaccaacc 86  Q
    |||||||||||||||| |||||||||||||||||||||| ||| ||||||    
T  19456340 atcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 19456389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 27498843 - 27498916
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactag 91  Q
    |||||||||| ||  || ||||||||||||||||| | |||||||||||||||||||  ||| |||||||||||    
T  27498843 gaaattggcaccagagggaatcgaacctgagacctctagaggagcaaactccaagattccaagccaaccactag 27498916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 28614614 - 28614667
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccact 89  Q
    |||||||||||||| |||||||||| ||||||| |||||||||| |||||||||    
T  28614614 aatcgaacctgagatctttggaggaacaaactctaagatctcaagccaaccact 28614667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 36954885 - 36954825
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||||||||| | |||||||||||||||||||| |||  |||||||||| ||||    
T  36954885 aatcgaacctgagacctctagaggagcaaactccaagatcccaaggcaaccactaggccaa 36954825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 54 - 96
Target Start/End: Original strand, 3715057 - 3715099
Alignment:
Q  54 tggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||||||||||||||| ||||||||||||||| ||||    
T  3715057 tggaggagcaaactccaagatcccaaaccaaccactaggccaa 3715099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 90
Target Start/End: Original strand, 7085756 - 7085810
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccacta 90  Q
    ||||||||| ||||||| |||||||| ||||||||||||| ||| ||||||||||    
T  7085756 aatcgaaccggagacctctggaggagaaaactccaagatcccaagccaaccacta 7085810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 86
Target Start/End: Complemental strand, 30485895 - 30485845
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaacc 86  Q
    ||||||||||||||||| || ||||||||||||||||||| ||| ||||||    
T  30485895 aatcgaacctgagacctctgaaggagcaaactccaagatcccaagccaacc 30485845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 101
Target Start/End: Original strand, 6014410 - 6014475
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaaaccaa 101  Q
    |||||||||||||| || ||||| |||||||||||||||| ||| |||| |||||| |||| ||||    
T  6014410 aatcgaacctgagatctctggagaagcaaactccaagatcccaagccaatcactaggccaacccaa 6014475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 14656645 - 14656694
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaac 85  Q
    ||||||||||||||||||  ||||||||||||||||| |||||| |||||    
T  14656645 aatcgaacctgagaccttgagaggagcaaactccaaggtctcaagccaac 14656694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 26009376 - 26009449
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactag 91  Q
    |||||||||| ||| || ||||||||| || |||||| |||||| ||||||  ||||| |||||||||||||||    
T  26009376 gaaattggcaccaaagggaatcgaaccggaaacctttcgaggagtaaactctgagatcccaaaccaaccactag 26009449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 89
Target Start/End: Original strand, 930596 - 930668
Alignment:
Q  18 gaaattggcagcaa-tggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccact 89  Q
    |||||||||| ||| ||| ||||||||||||||| ||  ||||||||||||| || ||||||| |||||||||    
T  930596 gaaattggcaccaagtgggaatcgaacctgagactttgagaggagcaaactctaaaatctcaagccaaccact 930668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 35 - 90
Target Start/End: Complemental strand, 16616187 - 16616132
Alignment:
Q  35 aaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccacta 90  Q
    |||||||| |||||| |||| |||||||||||||||||||| ||| ||||| ||||    
T  16616187 aaatcgaatctgagatctttagaggagcaaactccaagatcccaagccaactacta 16616132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 45 - 96
Target Start/End: Original strand, 25750750 - 25750801
Alignment:
Q  45 tgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||| |||||||||||||||||||||| |||  |||||||||| ||||    
T  25750750 tgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaa 25750801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 41 - 96
Target Start/End: Original strand, 27487690 - 27487745
Alignment:
Q  41 aacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||||| |||| ||||||||||||| ||| |||| |||||||||| ||||    
T  27487690 aacctgagacctctggaagagcaaactccaaaatcccaaatcaaccactaggccaa 27487745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 15931144 - 15931066
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||||||||||| | || || |||||||||||||||| ||| | ||||||||| ||||    
T  15931144 gaaattggcaccagagggaatcgaacctgagacttgtgaagaagcaaactccaagatcccaagctaaccactaggccaa 15931066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 19145523 - 19145601
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||||| ||||||||  |||||||| ||||||||||| |||  |||||||||| ||||    
T  19145523 gaaattggcaccagagggaatcgaaccggagaccttgagaggagcatactccaagatcccaagtcaaccactaggccaa 19145601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 40330696 - 40330646
Alignment:
Q  40 gaacctgagacctttggaggagcaaactccaagatctcaaaccaaccacta 90  Q
    |||| |||||||||  |||||||||||||||||||||||| | ||||||||    
T  40330696 gaacttgagaccttgagaggagcaaactccaagatctcaagctaaccacta 40330646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 54 - 96
Target Start/End: Complemental strand, 42006842 - 42006800
Alignment:
Q  54 tggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||| ||||||||||||||||||||| ||||||||||| ||||    
T  42006842 tggatgagcaaactccaagatctcaagccaaccactagcccaa 42006800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 85
Target Start/End: Original strand, 16172985 - 16173034
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaac 85  Q
    ||||||||||||||||||  |||||||| |||||||| |||||| |||||    
T  16172985 aatcgaacctgagaccttgagaggagcacactccaaggtctcaagccaac 16173034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 84
Target Start/End: Complemental strand, 43442271 - 43442222
Alignment:
Q  36 aatcgaacctgagaccttt-ggaggagcaaactccaagatctcaaaccaa 84  Q
    ||||||||||||||||||  ||||||||| ||||| ||||||||||||||    
T  43442271 aatcgaacctgagaccttgaggaggagcacactcccagatctcaaaccaa 43442222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 38 - 86
Target Start/End: Complemental strand, 7151394 - 7151346
Alignment:
Q  38 tcgaacctgagacctttggaggagcaaactccaagatctcaaaccaacc 86  Q
    |||||||| |||||| | |||||||||||||||||||| ||| ||||||    
T  7151394 tcgaacctaagacctcttgaggagcaaactccaagatcccaagccaacc 7151346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 21042663 - 21042715
Alignment:
Q  44 ctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||   ||||||||||||||||||| |||||||| ||||| |||||    
T  21042663 ctgagaccttgaaaggagcaaactccaagatcccaaaccaatcactaaaccaa 21042715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 57 - 85
Target Start/End: Original strand, 32007772 - 32007800
Alignment:
Q  57 aggagcaaactccaagatctcaaaccaac 85  Q
    |||||||||||||||||||||||||||||    
T  32007772 aggagcaaactccaagatctcaaaccaac 32007800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0576 (Bit Score: 51; Significance: 3e-20; HSPs: 1)
Name: scaffold0576
Description:

Target: scaffold0576; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 5194 - 5272
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||    
T  5194 gaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaa 5272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 3e-20; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 15360210 - 15360288
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||    
T  15360210 gaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaa 15360288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 92
Target Start/End: Complemental strand, 11007232 - 11007176
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactaga 92  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||    
T  11007232 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaga 11007176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 12591704 - 12591644
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||    
T  12591704 aatcgaacctgagacctttggaggagcaaactccaagatcccaagccaaccactaggccaa 12591644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 9239060 - 9238982
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  9239060 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 9238982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 11448938 - 11448878
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  11448938 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 11448878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 33 - 96
Target Start/End: Complemental strand, 9844008 - 9843945
Alignment:
Q  33 ggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||| ||||||||||||||| | |||||||||||||||||||| ||| ||||||||||||||||    
T  9844008 ggaagtcgaacctgagacctctagaggagcaaactccaagatcccaagccaaccactagaccaa 9843945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 92
Target Start/End: Complemental strand, 9208337 - 9208263
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactaga 92  Q
    |||||||||| ||  || ||||||||||||||||||  |||||||||||||||||||| ||| ||||||||||||    
T  9208337 gaaattggcaccagggggaatcgaacctgagaccttgagaggagcaaactccaagatcccaatccaaccactaga 9208263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 99
Target Start/End: Original strand, 654258 - 654339
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaaacc 99  Q
    |||||||||| ||  || ||||||||||||||||| |||||||||||||||||||||| |||  || ||||||| |||||||    
T  654258 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagtcagccactaggccaaacc 654339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 34 - 91
Target Start/End: Original strand, 9690766 - 9690823
Alignment:
Q  34 gaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactag 91  Q
    |||||||||||| |||||| |||| ||||||||||||| |||||||||||||||||||    
T  9690766 gaaatcgaacctaagacctctggaagagcaaactccaaaatctcaaaccaaccactag 9690823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 22576134 - 22576074
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||| ||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  22576134 aatcgaatctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 22576074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 33718588 - 33718648
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||||||| || ||||| || ||||||||||||| ||||||||||||||||||||    
T  33718588 aatcgaacctgagatctctggagaagtaaactccaagatcccaaaccaaccactagaccaa 33718648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 21982432 - 21982510
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || |||||||||| |||||| |||||||||||||| ||||||| ||| ||||||||||| ||||    
T  21982432 gaaattggcaccatcgggaatcgaacctcagacctctggaggagcaaacttcaagatcccaagccaaccactaggccaa 21982510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 34147431 - 34147353
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||||||||||| | |||| ||||||||||||||||| ||| ||||||||||| ||||    
T  34147431 gaaattggcaccagagggaatcgaacctgagacttctggaagagcaaactccaagatcccaagccaaccactaggccaa 34147353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 34160047 - 34159969
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||||||||||| | |||| ||||||||||||||||| ||| ||||||||||| ||||    
T  34160047 gaaattggcaccagagggaatcgaacctgagacttctggaagagcaaactccaagatcccaagccaaccactaggccaa 34159969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 13753303 - 13753247
Alignment:
Q  40 gaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||||| ||||||||||||||||||||||  || ||||||||||| ||||    
T  13753303 gaacctgagacctctggaggagcaaactccaagatccaaagccaaccactaggccaa 13753247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 19 - 75
Target Start/End: Complemental strand, 14212976 - 14212920
Alignment:
Q  19 aaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatc 75  Q
    ||||||||| ||  || ||||||||||||||||| ||||||||||||||||||||||    
T  14212976 aaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatc 14212920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 28672134 - 28672074
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| |||||| | ||||||||||||||||||||||||  |||||||||| ||||    
T  28672134 aatcgaacctaagacctctagaggagcaaactccaagatctcaagtcaaccactaggccaa 28672074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 17149586 - 17149637
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaacca 87  Q
    ||||||||||||||||||  |||||||| ||||||||||| |||||||||||    
T  17149586 aatcgaacctgagaccttgagaggagcacactccaagatcccaaaccaacca 17149637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 1345020 - 1344949
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactag 91  Q
    |||||||||| ||  || ||||||||||||||||| ||||||| |||||||||||||| |  ||||||||||||    
T  1345020 gaaattggcaccagagggaatcgaacctgagacctctggaggaacaaactccaagatccc--accaaccactag 1344949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 3222747 - 3222824
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||||||||||||| || ||||||||||| ||||||| ||| ||||||||||| ||||    
T  3222747 gaaattggcaccagagggaatcgaacctgagacctctg-aggagcaaactgcaagatcccaagccaaccactaggccaa 3222824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 35 - 79
Target Start/End: Original strand, 3433602 - 3433646
Alignment:
Q  35 aaatcgaacctgagacctttggaggagcaaactccaagatctcaa 79  Q
    |||||||||||||||||||  ||||||||||||||||| ||||||    
T  3433602 aaatcgaacctgagaccttgagaggagcaaactccaaggtctcaa 3433646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 5360201 - 5360253
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccac 88  Q
    ||||||||||||||||| | ||| |||||||||||||||| ||| ||||||||    
T  5360201 aatcgaacctgagacctcttgagaagcaaactccaagatcccaagccaaccac 5360253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 40 - 88
Target Start/End: Complemental strand, 33499537 - 33499489
Alignment:
Q  40 gaacctgagacctttggaggagcaaactccaagatctcaaaccaaccac 88  Q
    ||||||||||||||  |||||||||||||||||||| ||| ||||||||    
T  33499537 gaacctgagaccttgagaggagcaaactccaagatcccaagccaaccac 33499489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 36 - 86
Target Start/End: Original strand, 28968172 - 28968222
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaacc 86  Q
    ||||||| ||||||||| | |||||||||||||||||||| ||| ||||||    
T  28968172 aatcgaatctgagacctctagaggagcaaactccaagatcccaagccaacc 28968222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 36 - 93
Target Start/End: Original strand, 17081184 - 17081241
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagac 93  Q
    |||| ||| |||||| | ||||||||||||||||||||||  || |||||||||||||    
T  17081184 aatcaaacttgagacatctggaggagcaaactccaagatcctaagccaaccactagac 17081241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 17706437 - 17706489
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccac 88  Q
    |||||||| |||||| | |||||||||||||||||||||| |||  |||||||    
T  17706437 aatcgaacttgagacttctggaggagcaaactccaagatcccaagtcaaccac 17706489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 21148640 - 21148700
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||| |||||||| || |  |||||||||||||||| ||| ||||||||||| ||||    
T  21148640 aatcgaacttgagacctctgaaaaagcaaactccaagatcccaagccaaccactaggccaa 21148700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 66829 - 66769
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||    
T  66829 aatcgaacgtgagacctttggaggagcaaactccaagatcccaagccaaccactagaccaa 66769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 5e-19; HSPs: 47)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 27454996 - 27455056
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||    
T  27454996 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactagaccaa 27455056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 29057467 - 29057527
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||| ||||    
T  29057467 aatcgaacctgagacctttggagcagcaaactccaagatcccaaaccaaccactaggccaa 29057527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 46113532 - 46113592
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||||    
T  46113532 aatcgaacctgagacctctggaggagcaaactccaagatcccaaaccaaccactaggccaa 46113592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 4621349 - 4621427
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  4621349 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 4621427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 7197358 - 7197436
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  7197358 gaaattggcatcagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 7197436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 24674478 - 24674400
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  24674478 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 24674400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 46607895 - 46607817
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || |||||||||||||||||||||||||||||||||||||||| |||  |||||||||| ||||    
T  46607895 gaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactccaagatcccaagtcaaccactaggccaa 46607817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 30677261 - 30677188
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactag 91  Q
    |||||||||| ||  || |||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||    
T  30677261 gaaattggcaccagagggaatcaaacctgagacctttggaggagcaaactcctagatcccaaaccaaccactag 30677188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 8077714 - 8077654
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  8077714 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 8077654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 7578494 - 7578421
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactag 91  Q
    |||||||||| ||  || ||||||||||||||||| ||||||| |||||||||||||| ||| |||||||||||    
T  7578494 gaaattggcaccatagggaatcgaacctgagacctctggaggaacaaactccaagatcccaagccaaccactag 7578421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 7946929 - 7946856
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactag 91  Q
    |||||||||| ||  || |||||||| |||||||| |||||||||||||| ||||||||||| |||||||||||    
T  7946929 gaaattggcaccagagggaatcgaacttgagacctctggaggagcaaacttcaagatctcaagccaaccactag 7946856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 21726814 - 21726741
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactag 91  Q
    |||||||||| ||| || ||||||||||||||||| |||||||||||||| ||||| | |||| ||||||||||    
T  21726814 gaaattggcaccaaagggaatcgaacctgagacctctggaggagcaaacttcaagaacccaaatcaaccactag 21726741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 7766857 - 7766917
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| | ||||||||| ||||    
T  7766857 aatcgaacctgagacctctggaggagcaaactccaagatcccaagctaaccactaggccaa 7766917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 15059532 - 15059592
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||||||||| |||||||||||||||||||||  ||| ||||||||||| ||||    
T  15059532 aatcgaacctgagacctctggaggagcaaactccaagattccaagccaaccactaggccaa 15059592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 20487302 - 20487393
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaaaccaaccccaaatgggtt 114  Q
    |||||||||| ||  || |||||||| |||||||| |||||||||||||||||||||| | | |||||||||     ||||||||||||||||||||    
T  20487302 gaaattggcaccagagggaatcgaacttgagacctctggaggagcaaactccaagatcccgagccaaccact-----aaaccaaccccaaatgggtt 20487393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 90
Target Start/End: Complemental strand, 24122108 - 24122036
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccacta 90  Q
    |||||||||| ||  || ||||||||||||||||| ||||||||||||| |||||||| ||| ||||||||||    
T  24122108 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaaccccaagatcccaagccaaccacta 24122036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 34778409 - 34778349
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||| |||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  34778409 aatcaaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 34778349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 37351591 - 37351643
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccac 88  Q
    ||||||||||||||| |||||||||||||||||||||||| ||| ||||||||    
T  37351591 aatcgaacctgagacatttggaggagcaaactccaagatcccaagccaaccac 37351643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 168286 - 168208
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || |||||||||||||||||||| | |||||||||| |||||| ||| ||||||||||| ||||    
T  168286 gaaattggcaccagagggaatcgaacctgagacctttgaaagagcaaactctaagatcccaagccaaccactaggccaa 168208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 90
Target Start/End: Complemental strand, 17935836 - 17935782
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccacta 90  Q
    ||||||||||||||||| |||||||||||||||||||||| |||  |||||||||    
T  17935836 aatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccacta 17935782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 36 - 86
Target Start/End: Original strand, 33905640 - 33905690
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaacc 86  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| ||||||    
T  33905640 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaacc 33905690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 96
Target Start/End: Complemental strand, 1378813 - 1378752
Alignment:
Q  35 aaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||| ||||||||||||||||| ||||||||||||  |||  |||||||||||||||    
T  1378813 aaatcgaacatgagacctttggaggagtaaactccaagattccaagtcaaccactagaccaa 1378752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 33 - 90
Target Start/End: Complemental strand, 1378968 - 1378911
Alignment:
Q  33 ggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccacta 90  Q
    ||||||||||| |||||| |||||||||||||||||||||||| |||  |||||||||    
T  1378968 ggaaatcgaacatgagacttttggaggagcaaactccaagatcccaagtcaaccacta 1378911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 36 - 89
Target Start/End: Original strand, 19034516 - 19034569
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccact 89  Q
    |||||||||||| |||||| ||||| |||||||||||||| |||||||||||||    
T  19034516 aatcgaacctgaaaccttttgaggaacaaactccaagatcccaaaccaaccact 19034569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 23734201 - 23734105
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaaaccaaccccaaatgggtttaa 117  Q
    |||||||||| ||  || ||||||||||||||||| |||||||||||| || |||||| ||| ||||| |||     |||||||||||||||||||| ||    
T  23734201 gaaattggcatcagagggaatcgaacctgagacctctggaggagcaaattctaagatcccaagccaactact-----aaaccaaccccaaatgggttaaa 23734107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 119
Target Start/End: Complemental strand, 23741393 - 23741297
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaaaccaaccccaaatgggtttaa 117  Q
    |||||||||| ||  || ||||||||||||||||| |||||||||||| || |||||| ||| ||||| |||     |||||||||||||||||||| ||    
T  23741393 gaaattggcatcagagggaatcgaacctgagacctctggaggagcaaattctaagatcccaagccaactact-----aaaccaaccccaaatgggttaaa 23741299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 24217063 - 24216990
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactag 91  Q
    |||||||||| ||| || ||||||||||||||||||  |||||||| ||||||||||| |||  ||||||||||    
T  24217063 gaaattggcaccaaaggtaatcgaacctgagaccttgagaggagcacactccaagatcccaagtcaaccactag 24216990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 34 - 90
Target Start/End: Original strand, 8779864 - 8779920
Alignment:
Q  34 gaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccacta 90  Q
    ||||||||| ||||||||| ||||| |||||||||||||||| |||| |||||||||    
T  8779864 gaaatcgaagctgagacctctggagaagcaaactccaagatcccaaatcaaccacta 8779920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 36 - 91
Target Start/End: Complemental strand, 18646920 - 18646865
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactag 91  Q
    ||||||||||||||||| ||||| ||||||||| |||||| ||| |||||||||||    
T  18646920 aatcgaacctgagacctctggagaagcaaactcaaagatcacaagccaaccactag 18646865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 81
Target Start/End: Original strand, 36156000 - 36156063
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaac 81  Q
    |||||||||| ||  || |||||||||||| |||| |||||||||||||||||||||| |||||    
T  36156000 gaaattggcaccagagggaatcgaacctgacacctctggaggagcaaactccaagatcccaaac 36156063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 85
Target Start/End: Original strand, 45859155 - 45859222
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaac 85  Q
    |||||||||| ||  || ||||||||||||||||| | |||||||||||||||||||| ||| |||||    
T  45859155 gaaattggcaccagagggaatcgaacctgagacctctagaggagcaaactccaagatcccaagccaac 45859222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 51 - 101
Target Start/End: Complemental strand, 6776196 - 6776146
Alignment:
Q  51 ctttggaggagcaaactccaagatctcaaaccaaccactagaccaaaccaa 101  Q
    ||||| ||||||||||||||||||| ||||||||||||||| |||| ||||    
T  6776196 ctttgaaggagcaaactccaagatcccaaaccaaccactaggccaacccaa 6776146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 32729630 - 32729552
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||||||||||| ||  ||||||||||||| |||||| ||| ||||||||||| ||||    
T  32729630 gaaattggcaccatagggaatcgaacctgagactttgagaggagcaaactcgaagatcccaagccaaccactaggccaa 32729552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 33 - 91
Target Start/End: Complemental strand, 32930819 - 32930761
Alignment:
Q  33 ggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactag 91  Q
    ||||||||||| |||||||| || ||||| ||||||||||||  |||||||||||||||    
T  32930819 ggaaatcgaacttgagacctctgaaggagtaaactccaagattccaaaccaaccactag 32930761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 38 - 91
Target Start/End: Complemental strand, 1138644 - 1138591
Alignment:
Q  38 tcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactag 91  Q
    |||||||| |||||||  |||||||| ||||||||||||||| |||||||||||    
T  1138644 tcgaacctaagaccttgagaggagcacactccaagatctcaagccaaccactag 1138591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 88
Target Start/End: Complemental strand, 809289 - 809237
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccac 88  Q
    |||| |||||||||||||  |||||| ||||||||||||| ||||||||||||    
T  809289 aatcaaacctgagaccttaagaggagtaaactccaagatcccaaaccaaccac 809237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 84
Target Start/End: Original strand, 9500485 - 9500533
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaa 84  Q
    ||||||||||||||||| || ||||||||||||||||||| ||| ||||    
T  9500485 aatcgaacctgagacctctgaaggagcaaactccaagatcccaagccaa 9500533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 14258557 - 14258617
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||| ||||| | ||||||| |||||||||||||| ||| ||||||||||| ||||    
T  14258557 aatcgaaccagagacatctggaggaacaaactccaagatcccaagccaaccactaggccaa 14258617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 25237119 - 25237179
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||||||||||  ||| |||||||||||||||| ||||| ||||| ||| ||||    
T  25237119 aatcgaacctgagaccttgagagaagcaaactccaagatcccaaactaaccattaggccaa 25237179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Complemental strand, 52135197 - 52135137
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||||||| ||  || ||||||||||||||||| |||  |||||||||||||||    
T  52135197 aatcgaacctgagacattgagatgagcaaactccaagatcccaagtcaaccactagaccaa 52135137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 33 - 96
Target Start/End: Complemental strand, 37349593 - 37349530
Alignment:
Q  33 ggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||||||||| | |  ||||||||||||| ||||||||||  ||||||||| |||||    
T  37349593 ggaaatcgaacctgagatcatgagaggagcaaactctaagatctcaagtcaaccactaaaccaa 37349530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 91
Target Start/End: Complemental strand, 1486503 - 1486432
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactag 91  Q
    |||||||||| ||| || ||||||||||||||||||  ||| |||  ||||||||||| ||| |||||||||||    
T  1486503 gaaattggcaccaaagggaatcgaacctgagaccttgagagtagc--actccaagatcccaagccaaccactag 1486432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 2272429 - 2272351
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || |||| |||||||||||| || |||||||||||| |||||| |||  |||||||||| ||||    
T  2272429 gaaattggcatcagagggaatcaaacctgagacctctgtaggagcaaactctaagatcccaagtcaaccactaggccaa 2272351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 41 - 91
Target Start/End: Complemental strand, 10059117 - 10059067
Alignment:
Q  41 aacctgagacctttggaggagcaaactccaagatctcaaaccaaccactag 91  Q
    |||||||||| ||  ||||||||||||||||||||||||  ||||||||||    
T  10059117 aacctgagactttgagaggagcaaactccaagatctcaagtcaaccactag 10059067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 47091735 - 47091697
Alignment:
Q  58 ggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  47091735 ggagcaaactccaagatctcaagccaaccactaggccaa 47091697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 58 - 96
Target Start/End: Complemental strand, 52592605 - 52592567
Alignment:
Q  58 ggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||| |||||||||| ||||||||||||||||    
T  52592605 ggagcaaactctaagatctcaagccaaccactagaccaa 52592567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 23232395 - 23232455
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||||| |||| |||| ||||||||| ||||||| |||  |||||||||| ||||    
T  23232395 aatcgaacctgaaacctctggaagagcaaacttcaagatcccaagtcaaccactaggccaa 23232455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0459 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0459
Description:

Target: scaffold0459; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 96
Target Start/End: Original strand, 10820 - 10883
Alignment:
Q  33 ggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  10820 ggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 10883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0366
Description:

Target: scaffold0366; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 33 - 96
Target Start/End: Original strand, 12127 - 12190
Alignment:
Q  33 ggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  12127 ggaaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 12190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0366; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 9429 - 9489
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  9429 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 9489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 47; Significance: 7e-18; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 97478 - 97556
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || |||||||||||||||||||||||||||||||| ||||||| ||| ||||||||||| ||||    
T  97478 gaaattggcaccagagggaatcgaacctgagacctttggaggagcaaactacaagatcccaagccaaccactaggccaa 97556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0623 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0623
Description:

Target: scaffold0623; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 1186 - 1246
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  1186 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 1246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0199 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 8537 - 8597
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  8537 aatcgaacctgagacctctggaggagcaaactccaagatcccaagccaaccactaggccaa 8597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 19 - 96
Target Start/End: Complemental strand, 27860 - 27783
Alignment:
Q  19 aaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||| ||  || ||||||||| ||||||||  |||||||||||||||| ||| ||||||||||||||||||||    
T  27860 aaattggcaccacagggaatcgaacccgagaccttgagaggagcaaactccaaaatcccaaaccaaccactagaccaa 27783  T

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Target: scaffold0717 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0717
Description:

Target: scaffold0717; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 88 - 148
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||||||||| |||| ||||||||||||||||| ||| ||||||||||| ||||    
T  88 aatcgaacctgagacctctggacgagcaaactccaagatcacaagccaaccactaggccaa 148  T

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Target: scaffold0460 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 8291 - 8382
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaaaccaaccccaaatgggtt 114  Q
    |||||||||| ||  || |||||||| |||||||| |||||||||||||||||||||| | | |||||||||     ||||||||||||||||||||    
T  8291 gaaattggcaccagagggaatcgaacttgagacctctggaggagcaaactccaagatcccgagccaaccact-----aaaccaaccccaaatgggtt 8382  T

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Target: scaffold0068 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 41774 - 41834
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||||||||| |||||||||||||||||||||| |||  |||||||||| ||||    
T  41774 aatcgaacctgagacctctggaggagcaaactccaagatcccaagtcaaccactaggccaa 41834  T

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Target: scaffold0070 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 96
Target Start/End: Complemental strand, 40410 - 40332
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||||||||||||| || |||||||||||||||||||  || ||||||||||| ||||    
T  40410 gaaattggcaccagagggaatcgaacctgagacctctgaaggagcaaactccaagatcctaagccaaccactaggccaa 40332  T

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Target: scaffold0051 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 96
Target Start/End: Original strand, 52983 - 53061
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||| ||  || ||||||||||||  ||| |||||||||||||||||||||| ||| ||||||||||| ||||    
T  52983 gaaattggcaccagagggaatcgaacctgaagcctctggaggagcaaactccaagatcccaagccaaccactaggccaa 53061  T

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Target: scaffold0019 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 84
Target Start/End: Complemental strand, 161894 - 161828
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaa 84  Q
    |||||||||| ||  || ||||||||||||||||| |||||||||||||||||||||| ||| ||||    
T  161894 gaaattggcaccagagggaatcgaacctgagacctctggaggagcaaactccaagatcccaagccaa 161828  T

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Target: scaffold0328 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0328
Description:

Target: scaffold0328; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 40 - 96
Target Start/End: Complemental strand, 15054 - 14998
Alignment:
Q  40 gaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    ||||||||||||| |||||||||||||||||||||| ||  ||||||||||| ||||    
T  15054 gaacctgagacctctggaggagcaaactccaagatcccaggccaaccactaggccaa 14998  T

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Target: scaffold0217 (Bit Score: 37; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0217
Description:

Target: scaffold0217; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 7439 - 7499
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||||||| || |||||||||||||||||||||| ||| ||||| ||||| ||||    
T  7439 aatcgaacctgagatctctggaggagcaaactccaagatcccaagccaactactaggccaa 7499  T

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Target: scaffold0157 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0157
Description:

Target: scaffold0157; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 75
Target Start/End: Complemental strand, 20307 - 20250
Alignment:
Q  18 gaaattggcagcaatggaaatcgaacctgagacctttggaggagcaaactccaagatc 75  Q
    |||||||||| ||  || |||| ||||||||||||||| |||||||||||||||||||    
T  20307 gaaattggcaccagagggaatcaaacctgagacctttgaaggagcaaactccaagatc 20250  T

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Target: scaffold0240 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0240
Description:

Target: scaffold0240; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 36 - 96
Target Start/End: Original strand, 12884 - 12944
Alignment:
Q  36 aatcgaacctgagacctttggaggagcaaactccaagatctcaaaccaaccactagaccaa 96  Q
    |||||||||||||| || ||||||||| |||||||||||| |||  |||||||||| ||||    
T  12884 aatcgaacctgagatctctggaggagcgaactccaagatcccaagtcaaccactaggccaa 12944  T

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