View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15707_low_11 (Length: 368)

Name: NF15707_low_11
Description: NF15707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15707_low_11
NF15707_low_11
[»] chr2 (44 HSPs)
chr2 (142-368)||(25544484-25544706)
chr2 (1-145)||(25544799-25544942)
chr2 (290-364)||(23354630-23354704)
chr2 (292-361)||(11307984-11308053)
chr2 (295-364)||(30563416-30563485)
chr2 (308-364)||(24011043-24011099)
chr2 (310-364)||(10535757-10535811)
chr2 (312-364)||(12748691-12748743)
chr2 (318-364)||(34006997-34007043)
chr2 (291-364)||(23354974-23355047)
chr2 (308-364)||(19573985-19574041)
chr2 (319-364)||(18570979-18571024)
chr2 (318-364)||(4229414-4229460)
chr2 (326-368)||(22085007-22085049)
chr2 (302-364)||(38919213-38919275)
chr2 (318-363)||(12668429-12668474)
chr2 (318-363)||(18889597-18889642)
chr2 (310-354)||(30394474-30394518)
chr2 (308-364)||(37986786-37986842)
chr2 (318-357)||(8300225-8300264)
chr2 (320-363)||(21616770-21616813)
chr2 (325-364)||(31026702-31026741)
chr2 (329-364)||(40681989-40682024)
chr2 (318-364)||(6249206-6249252)
chr2 (329-363)||(21782835-21782869)
chr2 (329-363)||(23921261-23921295)
chr2 (326-364)||(30298461-30298499)
chr2 (325-363)||(36281693-36281731)
chr2 (318-363)||(5367200-5367245)
chr2 (308-364)||(6698455-6698512)
chr2 (319-364)||(23406875-23406920)
chr2 (318-363)||(23718034-23718079)
chr2 (318-363)||(24105706-24105751)
chr2 (318-363)||(29970555-29970600)
chr2 (318-363)||(37411250-37411295)
chr2 (318-363)||(42832282-42832327)
chr2 (318-363)||(44860328-44860373)
chr2 (318-359)||(45000852-45000893)
chr2 (331-363)||(2331802-2331834)
chr2 (325-361)||(17520083-17520119)
chr2 (320-364)||(19613621-19613665)
chr2 (323-363)||(25846749-25846789)
chr2 (307-363)||(28677917-28677973)
chr2 (319-363)||(35449521-35449565)
[»] chr4 (57 HSPs)
chr4 (49-145)||(1154907-1155003)
chr4 (292-364)||(20743258-20743330)
chr4 (293-365)||(31243529-31243601)
chr4 (308-364)||(24343514-24343570)
chr4 (306-364)||(3144646-3144704)
chr4 (1-47)||(1154798-1154844)
chr4 (292-362)||(6273953-6274023)
chr4 (234-360)||(17876166-17876287)
chr4 (322-364)||(7012073-7012115)
chr4 (319-364)||(18513248-18513293)
chr4 (315-364)||(19230312-19230361)
chr4 (311-364)||(32910558-32910611)
chr4 (311-364)||(53968553-53968606)
chr4 (320-364)||(5654599-5654643)
chr4 (309-364)||(30520433-30520489)
chr4 (325-364)||(10546155-10546194)
chr4 (318-364)||(14465300-14465346)
chr4 (320-362)||(46180944-46180986)
chr4 (314-363)||(22440602-22440651)
chr4 (319-364)||(34515881-34515926)
chr4 (308-364)||(34589704-34589758)
chr4 (308-364)||(8820415-8820471)
chr4 (318-362)||(11110212-11110256)
chr4 (312-364)||(16402211-16402263)
chr4 (320-364)||(36386219-36386263)
chr4 (320-364)||(47191001-47191045)
chr4 (322-362)||(49659533-49659573)
chr4 (320-364)||(50848311-50848355)
chr4 (312-359)||(683064-683111)
chr4 (308-351)||(23386166-23386209)
chr4 (320-363)||(36635332-36635375)
chr4 (325-364)||(43299984-43300023)
chr4 (325-364)||(43300623-43300662)
chr4 (329-363)||(903930-903964)
chr4 (318-364)||(7727965-7728011)
chr4 (329-363)||(8423735-8423769)
chr4 (329-363)||(21945511-21945545)
chr4 (308-361)||(944664-944717)
chr4 (326-363)||(2976702-2976739)
chr4 (318-363)||(5775364-5775409)
chr4 (308-364)||(20521847-20521901)
chr4 (310-359)||(21732358-21732407)
chr4 (315-364)||(29088245-29088294)
chr4 (318-363)||(33950144-33950189)
chr4 (318-363)||(40613458-40613503)
chr4 (327-364)||(51673457-51673494)
chr4 (318-363)||(54580029-54580074)
chr4 (327-363)||(8457933-8457969)
chr4 (320-364)||(25950552-25950595)
chr4 (329-361)||(26276026-26276058)
chr4 (318-362)||(30103363-30103406)
chr4 (296-363)||(30982862-30982929)
chr4 (320-364)||(39507127-39507171)
chr4 (318-362)||(40699937-40699981)
chr4 (320-364)||(40783964-40784008)
chr4 (336-364)||(43188619-43188647)
chr4 (336-364)||(48845148-48845176)
[»] chr6 (43 HSPs)
chr6 (308-364)||(34446572-34446628)
chr6 (296-368)||(30781278-30781350)
chr6 (309-364)||(6389750-6389805)
chr6 (314-364)||(12235521-12235571)
chr6 (312-364)||(12086345-12086397)
chr6 (308-364)||(17168459-17168515)
chr6 (308-364)||(19602177-19602233)
chr6 (316-364)||(6299519-6299567)
chr6 (316-364)||(6306329-6306377)
chr6 (320-364)||(7569176-7569220)
chr6 (308-364)||(26247433-26247489)
chr6 (319-361)||(9024183-9024225)
chr6 (294-364)||(34229461-34229531)
chr6 (319-365)||(34895041-34895087)
chr6 (318-363)||(7265599-7265644)
chr6 (318-363)||(9025500-9025545)
chr6 (318-363)||(9195760-9195805)
chr6 (312-364)||(13689193-13689245)
chr6 (319-363)||(19040360-19040404)
chr6 (308-362)||(9629392-9629447)
chr6 (318-361)||(13364711-13364754)
chr6 (318-364)||(28862128-28862175)
chr6 (306-363)||(1532248-1532308)
chr6 (330-364)||(2140499-2140533)
chr6 (320-358)||(4420187-4420225)
chr6 (318-360)||(10157995-10158037)
chr6 (329-363)||(28715303-28715337)
chr6 (326-364)||(29049892-29049930)
chr6 (329-363)||(31579242-31579276)
chr6 (327-364)||(4859128-4859165)
chr6 (318-363)||(7086803-7086848)
chr6 (318-363)||(9617442-9617487)
chr6 (308-357)||(10031584-10031633)
chr6 (318-363)||(10842540-10842585)
chr6 (318-359)||(11591876-11591917)
chr6 (292-364)||(13211258-13211333)
chr6 (318-363)||(13851744-13851789)
chr6 (318-363)||(26178687-26178732)
chr6 (318-359)||(26562701-26562742)
chr6 (318-363)||(30866150-30866195)
chr6 (319-363)||(17341671-17341715)
chr6 (296-363)||(24832596-24832661)
chr6 (336-364)||(29711269-29711297)
[»] chr3 (45 HSPs)
chr3 (233-364)||(52369782-52369909)
chr3 (308-364)||(12704653-12704709)
chr3 (314-365)||(3730167-3730218)
chr3 (308-364)||(25074796-25074852)
chr3 (308-364)||(25892467-25892523)
chr3 (317-363)||(1830351-1830397)
chr3 (318-364)||(20691326-20691372)
chr3 (315-364)||(34189434-34189483)
chr3 (312-364)||(15864840-15864892)
chr3 (312-364)||(24205041-24205093)
chr3 (312-364)||(25365469-25365521)
chr3 (317-364)||(21149074-21149121)
chr3 (309-364)||(21211295-21211350)
chr3 (308-363)||(34307776-34307831)
chr3 (302-360)||(7931588-7931646)
chr3 (308-364)||(14223849-14223905)
chr3 (308-364)||(41319306-41319362)
chr3 (308-359)||(21367289-21367340)
chr3 (309-364)||(25652028-25652083)
chr3 (330-364)||(16789668-16789702)
chr3 (318-364)||(40150577-40150623)
chr3 (308-361)||(51512179-51512232)
chr3 (233-285)||(14209194-14209246)
chr3 (296-363)||(16192734-16192801)
chr3 (312-364)||(26665143-26665195)
chr3 (308-364)||(27903639-27903695)
chr3 (318-361)||(8039216-8039259)
chr3 (313-364)||(8903439-8903489)
chr3 (325-355)||(4704305-4704335)
chr3 (329-363)||(11251986-11252020)
chr3 (314-364)||(12100277-12100326)
chr3 (318-364)||(13799511-13799557)
chr3 (314-360)||(20141107-20141153)
chr3 (318-364)||(33006830-33006876)
chr3 (318-363)||(7928458-7928503)
chr3 (318-363)||(8039841-8039886)
chr3 (318-363)||(8383265-8383310)
chr3 (327-364)||(9210840-9210877)
chr3 (318-363)||(10954960-10955005)
chr3 (329-362)||(20503474-20503507)
chr3 (307-364)||(21861576-21861633)
chr3 (323-364)||(28779569-28779610)
chr3 (308-364)||(40697853-40697910)
chr3 (319-363)||(32804547-32804591)
chr3 (319-363)||(49505161-49505205)
[»] chr7 (41 HSPs)
chr7 (302-367)||(29812654-29812719)
chr7 (308-360)||(23930230-23930282)
chr7 (308-361)||(7133274-7133327)
chr7 (308-364)||(43250000-43250056)
chr7 (312-364)||(12278842-12278894)
chr7 (308-364)||(17780080-17780136)
chr7 (312-364)||(23751907-23751959)
chr7 (308-364)||(38804551-38804607)
chr7 (292-364)||(22683733-22683807)
chr7 (306-364)||(5938479-5938537)
chr7 (318-360)||(18233604-18233646)
chr7 (318-364)||(38134412-38134458)
chr7 (308-364)||(4017790-4017846)
chr7 (308-364)||(10230069-10230125)
chr7 (308-364)||(2525839-2525896)
chr7 (319-364)||(4909158-4909203)
chr7 (327-364)||(44172905-44172942)
chr7 (320-364)||(36314635-36314679)
chr7 (318-362)||(41229304-41229348)
chr7 (315-362)||(13427585-13427632)
chr7 (320-363)||(30813820-30813863)
chr7 (329-363)||(2424622-2424656)
chr7 (326-364)||(21247750-21247788)
chr7 (329-363)||(21880160-21880194)
chr7 (318-364)||(23128667-23128713)
chr7 (329-363)||(27945049-27945083)
chr7 (329-363)||(29787386-29787420)
chr7 (329-363)||(32308128-32308162)
chr7 (318-363)||(5835255-5835300)
chr7 (318-363)||(7328697-7328742)
chr7 (318-363)||(19992009-19992054)
chr7 (318-363)||(20549799-20549844)
chr7 (318-363)||(27732245-27732290)
chr7 (329-362)||(30731046-30731079)
chr7 (304-364)||(11591997-11592057)
chr7 (320-360)||(17307904-17307944)
chr7 (319-363)||(17851439-17851483)
chr7 (318-362)||(19930947-19930991)
chr7 (318-358)||(22602716-22602756)
chr7 (319-363)||(22868050-22868094)
chr7 (329-361)||(30730935-30730967)
[»] chr5 (41 HSPs)
chr5 (308-368)||(43554524-43554584)
chr5 (294-364)||(18607079-18607149)
chr5 (308-362)||(39695995-39696049)
chr5 (307-364)||(5467973-5468030)
chr5 (308-357)||(26205756-26205805)
chr5 (314-363)||(31264446-31264495)
chr5 (308-366)||(25863209-25863267)
chr5 (311-363)||(21137697-21137749)
chr5 (318-363)||(28588680-28588725)
chr5 (312-364)||(7997166-7997218)
chr5 (325-364)||(2577193-2577232)
chr5 (318-364)||(2548394-2548440)
chr5 (326-364)||(4344749-4344787)
chr5 (326-364)||(11596469-11596507)
chr5 (314-364)||(18288053-18288103)
chr5 (314-364)||(18586291-18586340)
chr5 (322-364)||(42469228-42469270)
chr5 (318-363)||(23015995-23016040)
chr5 (296-363)||(3966511-3966578)
chr5 (320-360)||(21194213-21194253)
chr5 (320-364)||(28296335-28296379)
chr5 (320-363)||(6471897-6471940)
chr5 (329-364)||(18162062-18162097)
chr5 (321-364)||(21577117-21577160)
chr5 (329-364)||(24906318-24906353)
chr5 (313-364)||(37472598-37472649)
chr5 (325-360)||(43208287-43208322)
chr5 (326-364)||(2419864-2419902)
chr5 (318-364)||(19737488-19737534)
chr5 (329-363)||(27932243-27932277)
chr5 (326-363)||(2039863-2039900)
chr5 (318-363)||(30098334-30098379)
chr5 (318-363)||(30502394-30502439)
chr5 (318-363)||(30542737-30542782)
chr5 (318-363)||(36838551-36838596)
chr5 (318-363)||(41091263-41091308)
chr5 (292-340)||(12594711-12594759)
chr5 (320-364)||(19293431-19293475)
chr5 (329-361)||(19438353-19438385)
chr5 (320-364)||(38749571-38749615)
chr5 (336-364)||(41558707-41558735)
[»] scaffold0598 (1 HSPs)
scaffold0598 (292-364)||(8033-8105)
[»] chr8 (40 HSPs)
chr8 (308-364)||(40063958-40064014)
chr8 (312-367)||(39820433-39820488)
chr8 (292-364)||(13009473-13009545)
chr8 (296-364)||(13845241-13845309)
chr8 (312-364)||(35431140-35431192)
chr8 (308-364)||(44067523-44067579)
chr8 (314-364)||(28883880-28883930)
chr8 (312-364)||(1676719-1676771)
chr8 (306-364)||(14513168-14513226)
chr8 (296-362)||(16869699-16869765)
chr8 (319-363)||(3025559-3025603)
chr8 (312-364)||(30068028-30068080)
chr8 (309-364)||(8017493-8017548)
chr8 (325-363)||(12559119-12559157)
chr8 (325-363)||(29198492-29198530)
chr8 (315-364)||(3658154-3658203)
chr8 (308-357)||(26915236-26915285)
chr8 (318-363)||(34897093-34897138)
chr8 (320-364)||(3508059-3508103)
chr8 (292-364)||(3911117-3911189)
chr8 (325-365)||(12985398-12985438)
chr8 (303-359)||(26609756-26609812)
chr8 (329-364)||(34201063-34201098)
chr8 (325-364)||(37225756-37225795)
chr8 (329-363)||(4611542-4611576)
chr8 (329-363)||(7658471-7658505)
chr8 (329-363)||(13203649-13203683)
chr8 (329-363)||(14134707-14134741)
chr8 (318-364)||(14692467-14692512)
chr8 (325-363)||(18646180-18646218)
chr8 (318-364)||(33382025-33382071)
chr8 (318-363)||(4786344-4786389)
chr8 (318-363)||(11927092-11927137)
chr8 (318-363)||(13844602-13844647)
chr8 (318-363)||(20679401-20679446)
chr8 (318-363)||(31236583-31236628)
chr8 (329-362)||(40332200-40332233)
chr8 (329-361)||(10441213-10441245)
chr8 (319-363)||(24362209-24362253)
chr8 (296-364)||(28819198-28819266)
[»] chr1 (46 HSPs)
chr1 (308-364)||(42004943-42004999)
chr1 (308-364)||(6936396-6936452)
chr1 (309-365)||(39101179-39101235)
chr1 (308-364)||(40747769-40747825)
chr1 (310-364)||(21145473-21145528)
chr1 (314-364)||(22794080-22794130)
chr1 (292-363)||(17831514-17831582)
chr1 (318-363)||(36878469-36878514)
chr1 (326-364)||(3921674-3921712)
chr1 (318-364)||(11412774-11412820)
chr1 (318-364)||(24176373-24176419)
chr1 (330-364)||(42325567-42325601)
chr1 (318-363)||(1864886-1864931)
chr1 (315-364)||(11634127-11634176)
chr1 (318-363)||(20157356-20157401)
chr1 (319-363)||(398772-398816)
chr1 (313-361)||(6573999-6574047)
chr1 (319-363)||(7918218-7918262)
chr1 (328-364)||(11571592-11571628)
chr1 (319-363)||(30847727-30847771)
chr1 (318-361)||(2445880-2445923)
chr1 (301-363)||(10233261-10233324)
chr1 (312-363)||(12443460-12443511)
chr1 (318-361)||(44482240-44482283)
chr1 (318-364)||(373054-373100)
chr1 (318-364)||(19637775-19637821)
chr1 (325-363)||(21038091-21038129)
chr1 (330-368)||(23440013-23440051)
chr1 (319-361)||(25361896-25361938)
chr1 (329-363)||(26238129-26238163)
chr1 (329-363)||(31015051-31015085)
chr1 (329-363)||(34298444-34298478)
chr1 (329-363)||(40181879-40181913)
chr1 (318-363)||(1486715-1486760)
chr1 (320-361)||(25098563-25098604)
chr1 (310-359)||(33313483-33313532)
chr1 (318-363)||(38075976-38076021)
chr1 (318-363)||(40285660-40285705)
chr1 (318-363)||(44296501-44296545)
chr1 (331-363)||(2896140-2896172)
chr1 (320-364)||(7988459-7988503)
chr1 (296-363)||(9828052-9828119)
chr1 (327-359)||(14332420-14332452)
chr1 (312-352)||(17705586-17705626)
chr1 (329-361)||(19324572-19324604)
chr1 (319-363)||(34712390-34712434)
[»] scaffold0199 (1 HSPs)
scaffold0199 (312-364)||(1956-2008)
[»] scaffold0007 (1 HSPs)
scaffold0007 (308-364)||(225264-225320)
[»] scaffold0049 (1 HSPs)
scaffold0049 (319-361)||(56932-56974)
[»] scaffold0085 (1 HSPs)
scaffold0085 (319-364)||(26005-26050)
[»] scaffold0044 (1 HSPs)
scaffold0044 (318-362)||(53189-53233)
[»] scaffold0008 (1 HSPs)
scaffold0008 (296-363)||(263356-263423)
[»] scaffold0011 (1 HSPs)
scaffold0011 (318-365)||(240027-240074)
[»] scaffold0004 (1 HSPs)
scaffold0004 (329-363)||(92815-92849)
[»] scaffold0571 (1 HSPs)
scaffold0571 (327-364)||(7697-7734)
[»] scaffold0123 (1 HSPs)
scaffold0123 (318-359)||(44531-44572)
[»] scaffold0050 (1 HSPs)
scaffold0050 (318-363)||(70286-70331)
[»] scaffold0036 (1 HSPs)
scaffold0036 (318-363)||(9753-9798)
[»] scaffold0020 (1 HSPs)
scaffold0020 (318-363)||(135318-135363)
[»] scaffold0778 (1 HSPs)
scaffold0778 (316-364)||(4413-4461)


Alignment Details
Target: chr2 (Bit Score: 158; Significance: 5e-84; HSPs: 44)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 158; E-Value: 5e-84
Query Start/End: Original strand, 142 - 368
Target Start/End: Complemental strand, 25544706 - 25544484
Alignment:
Q  142 caagaacagaaaagcataaaaacaataatttgtttttcagcacttattctttctcctaataaatcatgatctttattttacaatcacatagaacctatga 241  Q
    |||||||||||||| || ||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||    
T  25544706 caagaacagaaaagtattaaaacaataatttgtttttcagcacttattctttctcttaataaatcatgacctttattttacaatcacatagaacctatga 25544607  T
Q  242 agcacgaacacttcttggatgaggtgtgtccccatgtcgaacacacatcggtcggtgtctgacactgacaccgacacgacacctatgattacactgaatt 341  Q
    | |||| |||||| |||||| ||||||||  |||||||| ||||||    || |||||||||||||||||||||||||||||||||||||||||||||||    
T  25544606 accacggacactttttggattaggtgtgtatccatgtcggacacac----gttggtgtctgacactgacaccgacacgacacctatgattacactgaatt 25544511  T
Q  342 atgtcattttctcaaattattatacgt 368  Q
    || ||||||||||||||||||||||||    
T  25544510 atatcattttctcaaattattatacgt 25544484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 133; E-Value: 4e-69
Query Start/End: Original strand, 1 - 145
Target Start/End: Complemental strand, 25544942 - 25544799
Alignment:
Q  1 ttttgctatactaaattgcattgcttattaggttgaactgcaacctcgtaaaattgagatttctaagagtctcctttagaatttgatggcttttcctctc 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  25544942 ttttgctatactaaattgcattgtttattaggttgaactgcaacctcgtaaaattgagatttctaagagtctccttta-aatttgatggcttttcctctc 25544844  T
Q  101 caattctgctgaaattaaaaacaggatttatgccaaaatcacaag 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  25544843 caattctgctgaaattaaaaacaggatttatgccaaaatcacaag 25544799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 290 - 364
Target Start/End: Original strand, 23354630 - 23354704
Alignment:
Q  290 cggtcggtgtctgacactgacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||| ||| | ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  23354630 cggtcggtgtccgaccccgacaccgacacgacacctatgattacactaaattatatcattttctcaaattattat 23354704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 292 - 361
Target Start/End: Original strand, 11307984 - 11308053
Alignment:
Q  292 gtcggtgtctgacactgacaccgacacgacacctatgattacactgaattatgtcattttctcaaattat 361  Q
    |||||||||  |||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  11307984 gtcggtgtccaacaccgacaccgacacgacacctatgattacactgaattatgtcattttttcaaattat 11308053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 295 - 364
Target Start/End: Complemental strand, 30563485 - 30563416
Alignment:
Q  295 ggtgtctgacactgacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||| ||||||||||||||||| ||||||||  ||||| |||||||||||||||||||||||||||||    
T  30563485 ggtgtccgacactgacaccgacacaacacctatagttacattgaattatgtcattttctcaaattattat 30563416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 24011099 - 24011043
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||| ||||||||||||||||||| |||||||||||||||||||||||||||    
T  24011099 gacaccgacgcgacacctatgattacactaaattatgtcattttctcaaattattat 24011043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 310 - 364
Target Start/End: Original strand, 10535757 - 10535811
Alignment:
Q  310 caccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||| ||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  10535757 caccaacacgacacttatgattacactgaattatgtcattttctcaaattattat 10535811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 312 - 364
Target Start/End: Complemental strand, 12748743 - 12748691
Alignment:
Q  312 ccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  12748743 ccgacacaacacctatgattacactgaactatgtcattttctcaaattattat 12748691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 34006997 - 34007043
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||    
T  34006997 cgacacctatgattacactgaattatgtcaatttctcaaattattat 34007043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 291 - 364
Target Start/End: Original strand, 23354974 - 23355047
Alignment:
Q  291 ggtcggtgtctgacactgacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||  || | |||||||||| ||||||||||||| |||| |||||| ||||||||||||||||||||    
T  23354974 ggtcggtgtccaaccccgacaccgacatgacacctatgattgcactaaattatatcattttctcaaattattat 23355047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 19574041 - 19573985
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||||| ||||||| ||||||||||||||||| ||||||| ||||||||||    
T  19574041 gacaccgacacgccacctataattacactgaattatgttattttcttaaattattat 19573985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 319 - 364
Target Start/End: Complemental strand, 18571024 - 18570979
Alignment:
Q  319 gacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||    
T  18571024 gacacatatgattacattgaattatgtcattttctcaaattattat 18570979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 4229414 - 4229460
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||| ||||||||||||||||||||||||| ||| ||||||||||    
T  4229414 cgacacatatgattacactgaattatgtcattctcttaaattattat 4229460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 368
Target Start/End: Complemental strand, 22085049 - 22085007
Alignment:
Q  326 atgattacactgaattatgtcattttctcaaattattatacgt 368  Q
    ||||||||||| |||||||||||||||| ||||||||||||||    
T  22085049 atgattacactaaattatgtcattttcttaaattattatacgt 22085007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 302 - 364
Target Start/End: Complemental strand, 38919275 - 38919213
Alignment:
Q  302 gacactgacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||| |||||  |||||||||||||||||||||| || |||  |||||||||||||||||||    
T  38919275 gacaccgacactaacacgacacctatgattacactaaactataacattttctcaaattattat 38919213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 12668429 - 12668474
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| ||||||||||||||||||||||| |||||||||||    
T  12668429 cgacacttataattacactgaattatgtcattttttcaaattatta 12668474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 18889597 - 18889642
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||||||||||||||||||||| |||||||||| ||||||    
T  18889597 cgacacatatgattacactgaattatgtgattttctcaatttatta 18889642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 354
Target Start/End: Complemental strand, 30394518 - 30394474
Alignment:
Q  310 caccgacacgacacctatgattacactgaattatgtcattttctc 354  Q
    |||| ||| |||||||||||||| |||||||||||||||||||||    
T  30394518 caccaacaggacacctatgattatactgaattatgtcattttctc 30394474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 37986842 - 37986786
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||| |||||| ||||||||||||||| || ||| ||||||| ||||||||||||    
T  37986842 gacaccaacacgatacctatgattacactcaaatatatcattttttcaaattattat 37986786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 357
Target Start/End: Original strand, 8300225 - 8300264
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaa 357  Q
    |||||| |||||||||||| ||||||||||||||||||||    
T  8300225 cgacacttatgattacactaaattatgtcattttctcaaa 8300264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 363
Target Start/End: Complemental strand, 21616813 - 21616770
Alignment:
Q  320 acacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||| ||| ||||||||||||||||| |||||||||||||||||    
T  21616813 acacatataattacactgaattatgtgattttctcaaattatta 21616770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 325 - 364
Target Start/End: Complemental strand, 31026741 - 31026702
Alignment:
Q  325 tatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||| |||||||||||||||||| ||||||||||    
T  31026741 tatgattacattgaattatgtcattttcttaaattattat 31026702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 329 - 364
Target Start/End: Complemental strand, 40682024 - 40681989
Alignment:
Q  329 attacactgaattatgtcattttctcaaattattat 364  Q
    |||||| |||||||||||||||||||||||||||||    
T  40682024 attacattgaattatgtcattttctcaaattattat 40681989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 6249252 - 6249206
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||||| |||||||||||||   ||||||||||||||||||    
T  6249252 cgacacctatgaatacactgaattataatattttctcaaattattat 6249206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Original strand, 21782835 - 21782869
Alignment:
Q  329 attacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||||||||||| |||||||||||||||||    
T  21782835 attacactgaattatgtgattttctcaaattatta 21782869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 23921295 - 23921261
Alignment:
Q  329 attacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||||||||||| |||||||||||||||||    
T  23921295 attacactgaattatgtaattttctcaaattatta 23921261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 364
Target Start/End: Original strand, 30298461 - 30298499
Alignment:
Q  326 atgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||||||||||||||||||| | ||||||||||    
T  30298461 atgattacactgaattatgtcattttattaaattattat 30298499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 363
Target Start/End: Complemental strand, 36281731 - 36281693
Alignment:
Q  325 tatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||||||||| |||||||| |||||||||||||||||    
T  36281731 tatgattacactaaattatgtgattttctcaaattatta 36281693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Complemental strand, 5367245 - 5367200
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| ||||||||||||||||| |||| ||||||||||||    
T  5367245 cgacacatataattacactgaattatgtgatttcctcaaattatta 5367200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 6698455 - 6698512
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtca-ttttctcaaattattat 364  Q
    |||||| | ||||||| ||||||||||||||||||| ||| |||| ||||||||||||    
T  6698455 gacaccaatacgacacgtatgattacactgaattatttcacttttttcaaattattat 6698512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 319 - 364
Target Start/End: Complemental strand, 23406920 - 23406875
Alignment:
Q  319 gacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||||||  ||||||||||| ||||||| ||||||||||    
T  23406920 gacacctatgattattctgaattatgtaattttcttaaattattat 23406875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Complemental strand, 23718079 - 23718034
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| ||||||||||||||||| | |||||||||||||||    
T  23718079 cgacacatataattacactgaattatgtgactttctcaaattatta 23718034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Complemental strand, 24105751 - 24105706
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| ||||||||||||||||| | |||||||||||||||    
T  24105751 cgacacatataattacactgaattatgtgactttctcaaattatta 24105706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 29970555 - 29970600
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||||||||||||||| ||||  |||||||||||||||||    
T  29970555 cgacacatatgattacactgaactatgcgattttctcaaattatta 29970600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 37411250 - 37411295
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| || |||||||||||||| |||||||||||||||||    
T  37411250 cgacacatataatcacactgaattatgtgattttctcaaattatta 37411295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 42832282 - 42832327
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| ||||||||||| ||||| |||||||||||||||||    
T  42832282 cgacacttataattacactgaaatatgtaattttctcaaattatta 42832327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Complemental strand, 44860373 - 44860328
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| ||||||||||||||||  |||||||||||||||||    
T  44860373 cgacacatataattacactgaattatgcgattttctcaaattatta 44860328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 359
Target Start/End: Original strand, 45000852 - 45000893
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaatt 359  Q
    |||||| |||||||||| |||||| |||||||||||||||||    
T  45000852 cgacacatatgattacattgaattgtgtcattttctcaaatt 45000893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 363
Target Start/End: Complemental strand, 2331834 - 2331802
Alignment:
Q  331 tacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||||||||| |||||||||||||||||    
T  2331834 tacactgaattatgtgattttctcaaattatta 2331802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 325 - 361
Target Start/End: Original strand, 17520083 - 17520119
Alignment:
Q  325 tatgattacactgaattatgtcattttctcaaattat 361  Q
    ||||||||||||||||||||| ||||||| |||||||    
T  17520083 tatgattacactgaattatgtgattttcttaaattat 17520119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 19613621 - 19613665
Alignment:
Q  320 acacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||| ||| |||||| |||||||||| ||||||||||||||||||    
T  19613621 acacatatcattacattgaattatgttattttctcaaattattat 19613665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 323 - 363
Target Start/End: Complemental strand, 25846789 - 25846749
Alignment:
Q  323 cctatgattacactgaattatgtcattttctcaaattatta 363  Q
    ||||| |||||||||||| |||| |||||||||||||||||    
T  25846789 cctataattacactgaatcatgtgattttctcaaattatta 25846749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 363
Target Start/End: Complemental strand, 28677973 - 28677917
Alignment:
Q  307 tgacaccgacacgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||||||   || ||| ||||||||||||||||| ||||| |||||||||||    
T  28677973 tgacaccgacaccgaacatataattacactgaattatgtgattttttcaaattatta 28677917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 363
Target Start/End: Complemental strand, 35449565 - 35449521
Alignment:
Q  319 gacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    ||||| ||| ||||||||||||| ||| |||||||||||||||||    
T  35449565 gacacatataattacactgaattctgtgattttctcaaattatta 35449521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 93; Significance: 3e-45; HSPs: 57)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 49 - 145
Target Start/End: Original strand, 1154907 - 1155003
Alignment:
Q  49 taaaattgagatttctaagagtctcctttagaatttgatggcttttcctctccaattctgctgaaattaaaaacaggatttatgccaaaatcacaag 145  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1154907 taaaattgagatttctaagagtctcctttagaatttgatggcttttcctctccaattctgctgaaattaaaaacaggaattatgccaaaatcacaag 1155003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 292 - 364
Target Start/End: Original strand, 20743258 - 20743330
Alignment:
Q  292 gtcggtgtctgacactgacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||||||  ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  20743258 gtcggtgtctgacatcgacaccgacacaacacctatgattacactgaattatgtcattttctcaaattattat 20743330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 293 - 365
Target Start/End: Original strand, 31243529 - 31243601
Alignment:
Q  293 tcggtgtctgacactgacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattata 365  Q
    |||||||| |||||  ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31243529 tcggtgtccgacaccaacaccgacatgacacctatgattacactgaattatgtcattttctcaaattattata 31243601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 24343570 - 24343514
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||    
T  24343570 gacaccgacacgacacctataattacactgaattatgtaattttctcaaattattat 24343514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 306 - 364
Target Start/End: Original strand, 3144646 - 3144704
Alignment:
Q  306 ctgacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||||||||||||||||||||||| |||||| ||||||||| ||||||||||    
T  3144646 ctgacaccgacacgacacctatgattacactaaattatatcattttctgaaattattat 3144704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 1154798 - 1154844
Alignment:
Q  1 ttttgctatactaaattgcattgcttattaggttgaactgcaacctc 47  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  1154798 ttttgctatgctaaattgcattgcttattaggttgaactgcaacctc 1154844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 292 - 362
Target Start/End: Complemental strand, 6274023 - 6273953
Alignment:
Q  292 gtcggtgtctgacactgacaccgacacgacacctatgattacactgaattatgtcattttctcaaattatt 362  Q
    |||| |||||||||| ||||||||||||||  |||| |||||||| |||||| ||||||||||||||||||    
T  6274023 gtcgatgtctgacaccgacaccgacacgacgactataattacactaaattatatcattttctcaaattatt 6273953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 234 - 360
Target Start/End: Complemental strand, 17876287 - 17876166
Alignment:
Q  234 acctatgaagcacgaacacttcttggatgaggtgtgtccccatgtcgaacacacatcggtcggtgtctgacactgacaccgacacgacacctatgattac 333  Q
    |||||||||||||  ||||| ||||||| ||||||||||   ||||| |||  |    ||||||||||||||| ||||| |||||| ||| |||||||||    
T  17876287 acctatgaagcacagacactccttggattaggtgtgtcctggtgtcggacaagc----gtcggtgtctgacac-gacactgacacggcacatatgattac 17876193  T
Q  334 actgaattatgtcattttctcaaatta 360  Q
    ||| |||||||||||||||| ||||||    
T  17876192 actaaattatgtcattttctaaaatta 17876166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 322 - 364
Target Start/End: Complemental strand, 7012115 - 7012073
Alignment:
Q  322 acctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  7012115 acctatgatcacactgaattatgtcattttctcaaattattat 7012073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 319 - 364
Target Start/End: Original strand, 18513248 - 18513293
Alignment:
Q  319 gacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||| |||||||||| |||||||||||||||||||||||||||||    
T  18513248 gacacatatgattacattgaattatgtcattttctcaaattattat 18513293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 315 - 364
Target Start/End: Original strand, 19230312 - 19230361
Alignment:
Q  315 acacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||||| |||||| |||||||||| ||||||||||||||||||    
T  19230312 acacgacacctataattacattgaattatgttattttctcaaattattat 19230361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 32910611 - 32910558
Alignment:
Q  311 accgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||  ||||| || ||||||||||||||||||||||||||||||||||||    
T  32910611 accgacataacacccataattacactgaattatgtcattttctcaaattattat 32910558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 364
Target Start/End: Complemental strand, 53968606 - 53968553
Alignment:
Q  311 accgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||||| |||||||  ||||||||||||||||||||| ||||||||||    
T  53968606 accgacacgacatctatgatatcactgaattatgtcattttcttaaattattat 53968553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 5654599 - 5654643
Alignment:
Q  320 acacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||| |||||||||| |||||||||||||||||||||||||||||    
T  5654599 acacgtatgattacattgaattatgtcattttctcaaattattat 5654643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 309 - 364
Target Start/End: Original strand, 30520433 - 30520489
Alignment:
Q  309 acaccgacacgacacctatgattacactgaattatgtca-ttttctcaaattattat 364  Q
    |||| ||||| |||||||||||||||||||||||||||| |||| ||||||||||||    
T  30520433 acactgacactacacctatgattacactgaattatgtcatttttttcaaattattat 30520489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 325 - 364
Target Start/End: Complemental strand, 10546194 - 10546155
Alignment:
Q  325 tatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||| |||||||||||||||||||||||||||||    
T  10546194 tatgattacattgaattatgtcattttctcaaattattat 10546155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 14465300 - 14465346
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||| |||||||| | |||||||||||||||||||||||||||||    
T  14465300 cgacacatatgattaaattgaattatgtcattttctcaaattattat 14465346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 320 - 362
Target Start/End: Original strand, 46180944 - 46180986
Alignment:
Q  320 acacctatgattacactgaattatgtcattttctcaaattatt 362  Q
    |||| ||||||||||||||||||||| ||||||||||||||||    
T  46180944 acacatatgattacactgaattatgttattttctcaaattatt 46180986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 314 - 363
Target Start/End: Original strand, 22440602 - 22440651
Alignment:
Q  314 gacacgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| ||| ||||||||||||||||| |||||||||||||||||    
T  22440602 gacacgtcacatataattacactgaattatgtgattttctcaaattatta 22440651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 319 - 364
Target Start/End: Original strand, 34515881 - 34515926
Alignment:
Q  319 gacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||| ||||||||||||||||||||||||  |||||||||    
T  34515881 gacacctatgtttacactgaattatgtcattttcttgaattattat 34515926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 34589704 - 34589758
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||| ||||||||||  ||||||||| |||||||||||||||||||||||| ||||    
T  34589704 gacactgacacgacac--atgattacattgaattatgtcattttctcaaattgttat 34589758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 8820471 - 8820415
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||||||||| ||||| | || |||||||||| ||||| ||||||||||||    
T  8820471 gacaccgacacgacacatatgactccattgaattatgtgattttatcaaattattat 8820415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 11110256 - 11110212
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatt 362  Q
    |||||| ||||||||||  ||||||||||||||||||||||||||    
T  11110256 cgacacatatgattacatcgaattatgtcattttctcaaattatt 11110212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 364
Target Start/End: Original strand, 16402211 - 16402263
Alignment:
Q  312 ccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||| |||| ||||||||| || |||| ||||||||||||||||||    
T  16402211 ccgacacgacagctataattacactgtatcatgttattttctcaaattattat 16402263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 36386219 - 36386263
Alignment:
Q  320 acacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||| | |||||||||||||||||| |||||||||||||||||    
T  36386219 acacctttaattacactgaattatgtccttttctcaaattattat 36386263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 47191001 - 47191045
Alignment:
Q  320 acacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||| ||||||||| ||||||||||||||| |||||||||||    
T  47191001 acacctaggattacactaaattatgtcattttcgcaaattattat 47191045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 322 - 362
Target Start/End: Original strand, 49659533 - 49659573
Alignment:
Q  322 acctatgattacactgaattatgtcattttctcaaattatt 362  Q
    ||||||||||||||| |||||| ||||||||||||||||||    
T  49659533 acctatgattacactaaattatatcattttctcaaattatt 49659573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 50848311 - 50848355
Alignment:
Q  320 acacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||| |||||||||||||||| ||||||| ||||||||||||    
T  50848311 acacctacgattacactgaattatatcattttttcaaattattat 50848355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 312 - 359
Target Start/End: Complemental strand, 683111 - 683064
Alignment:
Q  312 ccgacacgacacctatgattacactgaattatgtcattttctcaaatt 359  Q
    |||||||||||| | |||||||| | ||||||||||||||||||||||    
T  683111 ccgacacgacacatgtgattacattcaattatgtcattttctcaaatt 683064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 351
Target Start/End: Complemental strand, 23386209 - 23386166
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcatttt 351  Q
    |||||||||| |||||||||||||||||| |||||| |||||||    
T  23386209 gacaccgacatgacacctatgattacactaaattatatcatttt 23386166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 363
Target Start/End: Complemental strand, 36635375 - 36635332
Alignment:
Q  320 acacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||| ||| ||||||||||||||||| |||||||||||||||||    
T  36635375 acacatataattacactgaattatgtgattttctcaaattatta 36635332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 325 - 364
Target Start/End: Original strand, 43299984 - 43300023
Alignment:
Q  325 tatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||| |||||||||| ||||||||||||||||||    
T  43299984 tatgattacattgaattatgtaattttctcaaattattat 43300023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 325 - 364
Target Start/End: Complemental strand, 43300662 - 43300623
Alignment:
Q  325 tatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||| |||||||||| ||||||||||||||||||    
T  43300662 tatgattacattgaattatgtaattttctcaaattattat 43300623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 903964 - 903930
Alignment:
Q  329 attacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||||||||||| |||||||||||||||||    
T  903964 attacactgaattatgtgattttctcaaattatta 903930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 7727965 - 7728011
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||| |||| ||||||| ||||||||||||||| |||||||    
T  7727965 cgacacctataattatactgaatcatgtcattttctcaacttattat 7728011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Original strand, 8423735 - 8423769
Alignment:
Q  329 attacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||||||||||| |||||||||||||||||    
T  8423735 attacactgaattatgtgattttctcaaattatta 8423769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 21945545 - 21945511
Alignment:
Q  329 attacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||||||||||||||||| |||||||||||    
T  21945545 attacactgaattatgtcattttttcaaattatta 21945511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 361
Target Start/End: Original strand, 944664 - 944717
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaattat 361  Q
    ||||| |||||||||||||| |||||||| ||||  |||||| |||||||||||    
T  944664 gacactgacacgacacctataattacactaaattgcgtcattatctcaaattat 944717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 363
Target Start/End: Complemental strand, 2976739 - 2976702
Alignment:
Q  326 atgattacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||| | ||||||||||||||||||||||||||    
T  2976739 atgattacattcaattatgtcattttctcaaattatta 2976702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 5775364 - 5775409
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| |||||||| |||||||| |||||||||||||||||    
T  5775364 cgacacatataattacacttaattatgtgattttctcaaattatta 5775409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 20521847 - 20521901
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||||||||  |||||| || |||||||||| ||||| ||||||||||||    
T  20521847 gacaccgacacgacac--atgatttcattgaattatgtgattttatcaaattattat 20521901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 359
Target Start/End: Original strand, 21732358 - 21732407
Alignment:
Q  310 caccgacacgacacctatgattacactgaattatgtcattttctcaaatt 359  Q
    |||||||||||||| | |||||||| | |||||||||||||| |||||||    
T  21732358 caccgacacgacacatgtgattacaatcaattatgtcattttttcaaatt 21732407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 315 - 364
Target Start/End: Original strand, 29088245 - 29088294
Alignment:
Q  315 acacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||| ||||| ||||||||| ||| | ||||||||||||||||||||    
T  29088245 acacgacgcctataattacactgtattttatcattttctcaaattattat 29088294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Complemental strand, 33950189 - 33950144
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| |||||||||| | |||||||| |||||||||||||||||    
T  33950189 cgacacatatgattacattaaattatgtgattttctcaaattatta 33950144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Complemental strand, 40613503 - 40613458
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| ||||||||||||||||| ||||||||||| |||||    
T  40613503 cgacacatataattacactgaattatgtgattttctcaaaatatta 40613458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 364
Target Start/End: Original strand, 51673457 - 51673494
Alignment:
Q  327 tgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||| ||||||||||||||||||| |||||||||    
T  51673457 tgattacaatgaattatgtcattttctccaattattat 51673494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 54580029 - 54580074
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| ||||||||||||||||| ||||| |||||||||||    
T  54580029 cgacacttataattacactgaattatgtgattttttcaaattatta 54580074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 363
Target Start/End: Complemental strand, 8457969 - 8457933
Alignment:
Q  327 tgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||||| | ||||||||||||||||||||||||||    
T  8457969 tgattacattcaattatgtcattttctcaaattatta 8457933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 25950552 - 25950595
Alignment:
Q  320 acacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||| ||||| ||||||||||||||| ||||||||||||    
T  25950552 acacctatgaatacacagaattatgtcatttt-tcaaattattat 25950595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 361
Target Start/End: Original strand, 26276026 - 26276058
Alignment:
Q  329 attacactgaattatgtcattttctcaaattat 361  Q
    |||||| ||||||||||||||||||||||||||    
T  26276026 attacattgaattatgtcattttctcaaattat 26276058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 30103363 - 30103406
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatt 362  Q
    |||||| |||||||||||| |||||||| ||||||||||||||||    
T  30103363 cgacacatatgattacact-aattatgtgattttctcaaattatt 30103406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 363
Target Start/End: Original strand, 30982862 - 30982929
Alignment:
Q  296 gtgtctgacactgacaccgacac-gacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||||| ||||| ||||| ||||| ||| ||||||||||| ||||| |||||||||||| ||||    
T  30982862 gtgtctgacaccgacac-gacaccgacacttataattacactgaaatatgtgattttctcaaatcatta 30982929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 39507127 - 39507171
Alignment:
Q  320 acacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||||||||| |||||| ||||||||  ||||||||||    
T  39507127 acacctatgattacacttaattatatcattttcataaattattat 39507171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 40699937 - 40699981
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatt 362  Q
    |||||| ||||||||  || |||||||||||||||||||||||||    
T  40699937 cgacacatatgattaagctaaattatgtcattttctcaaattatt 40699981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 40784008 - 40783964
Alignment:
Q  320 acacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||| ||||||||| ||||||||||| ||| ||||||||||||||    
T  40784008 acacatatgattacgctgaattatgttattatctcaaattattat 40783964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 336 - 364
Target Start/End: Complemental strand, 43188647 - 43188619
Alignment:
Q  336 tgaattatgtcattttctcaaattattat 364  Q
    |||||||||||||||||||||||||||||    
T  43188647 tgaattatgtcattttctcaaattattat 43188619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 336 - 364
Target Start/End: Complemental strand, 48845176 - 48845148
Alignment:
Q  336 tgaattatgtcattttctcaaattattat 364  Q
    |||||||||||||||||||||||||||||    
T  48845176 tgaattatgtcattttctcaaattattat 48845148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 57; Significance: 1e-23; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 34446628 - 34446572
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34446628 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 34446572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 296 - 368
Target Start/End: Original strand, 30781278 - 30781350
Alignment:
Q  296 gtgtctgacactgacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattatacgt 368  Q
    |||||||| | ||||||||||| |||||||||||||||| | |||||||||||||||||||||||||| ||||    
T  30781278 gtgtctgatattgacaccgacatgacacctatgattacaattaattatgtcattttctcaaattattacacgt 30781350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 309 - 364
Target Start/End: Complemental strand, 6389805 - 6389750
Alignment:
Q  309 acaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||||||||||||||||||||| |||||| ||||||||||||||||||||    
T  6389805 acaccgacacgacacctatgattacactaaattatatcattttctcaaattattat 6389750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 12235521 - 12235571
Alignment:
Q  314 gacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  12235521 gacacgacacctatgattacactgaattatgtcattttctctaattattat 12235571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 312 - 364
Target Start/End: Original strand, 12086345 - 12086397
Alignment:
Q  312 ccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||||||||||||| |||||||||||||||| ||||||||||||||    
T  12086345 ccgacacgacacctatgattaaactgaattatgtcattatctcaaattattat 12086397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 17168459 - 17168515
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||    
T  17168459 gacaccgacacgacacctattattacactaaattatatcattttctcaaattattat 17168515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 19602177 - 19602233
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||| | |||||||||||||||||||||| ||||||||||||||||||||    
T  19602177 gacaccgacacaatacctatgattacactgaattatatcattttctcaaattattat 19602233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 316 - 364
Target Start/End: Complemental strand, 6299567 - 6299519
Alignment:
Q  316 cacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||||| |||||| |||||||| ||||||||||||||||||||    
T  6299567 cacgacacctatcattacattgaattatatcattttctcaaattattat 6299519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 316 - 364
Target Start/End: Complemental strand, 6306377 - 6306329
Alignment:
Q  316 cacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||||| |||||| |||||||| ||||||||||||||||||||    
T  6306377 cacgacacctatcattacattgaattatatcattttctcaaattattat 6306329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 7569176 - 7569220
Alignment:
Q  320 acacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||    
T  7569176 acacctataattacactgaattatgtaattttctcaaattattat 7569220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 26247489 - 26247433
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||||| ||||||||||| ||| || ||||||||||||| ||||||||||    
T  26247489 gacaccgacacgaaacctatgattatactaaaatatgtcattttcttaaattattat 26247433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 319 - 361
Target Start/End: Original strand, 9024183 - 9024225
Alignment:
Q  319 gacacctatgattacactgaattatgtcattttctcaaattat 361  Q
    ||||| |||||||||| ||||||||||||||||||||||||||    
T  9024183 gacacatatgattacattgaattatgtcattttctcaaattat 9024225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 294 - 364
Target Start/End: Complemental strand, 34229531 - 34229461
Alignment:
Q  294 cggtgtctgacactgacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||| ||||| |||||| ||||| || |||| |||||||||| || ||||||||| ||||||||||||    
T  34229531 cggtgtccgacaccgacaccaacacggcatctattattacactgacttgtgtcattttttcaaattattat 34229461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 319 - 365
Target Start/End: Original strand, 34895041 - 34895087
Alignment:
Q  319 gacacctatgattacactgaattatgtcattttctcaaattattata 365  Q
    ||||||||||||||||||||||| | | |||||||||||||||||||    
T  34895041 gacacctatgattacactgaattgtataattttctcaaattattata 34895087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 7265599 - 7265644
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| ||||||||||||||||| |||||||||||||||||    
T  7265599 cgacacatataattacactgaattatgtgattttctcaaattatta 7265644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 9025500 - 9025545
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| ||||||||||||||||| |||||||||||||||||    
T  9025500 cgacacatataattacactgaattatgtgattttctcaaattatta 9025545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 9195760 - 9195805
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| |||||||| ||||||||||||||||||||||||||    
T  9195760 cgacacatataattacactaaattatgtcattttctcaaattatta 9195805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 364
Target Start/End: Original strand, 13689193 - 13689245
Alignment:
Q  312 ccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||| ||||||||||||| |||| | ||| ||||||||||||||||||    
T  13689193 ccgacacgatacctatgattacattgaaatttgttattttctcaaattattat 13689245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 363
Target Start/End: Complemental strand, 19040404 - 19040360
Alignment:
Q  319 gacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    ||||| ||| ||||||||||||||||| |||||||||||||||||    
T  19040404 gacacatataattacactgaattatgtgattttctcaaattatta 19040360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 308 - 362
Target Start/End: Complemental strand, 9629447 - 9629392
Alignment:
Q  308 gacaccgacac-gacacctatgattacactgaattatgtcattttctcaaattatt 362  Q
    ||||||||||| ||||| ||| |||||| |||||||||| ||||||||||||||||    
T  9629447 gacaccgacaccgacacatataattacattgaattatgtgattttctcaaattatt 9629392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 361
Target Start/End: Original strand, 13364711 - 13364754
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattat 361  Q
    |||||| ||||||||||||||||||| | |||||||||||||||    
T  13364711 cgacacatatgattacactgaattatatgattttctcaaattat 13364754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 28862175 - 28862128
Alignment:
Q  318 cgacacctatgattacactgaatt-atgtcattttctcaaattattat 364  Q
    |||||| ||||||||||||||||| |||||||||| ||||||||||||    
T  28862175 cgacacatatgattacactgaattaatgtcattttatcaaattattat 28862128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 306 - 363
Target Start/End: Complemental strand, 1532308 - 1532248
Alignment:
Q  306 ctgacaccgacacgacacc---tatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||||| ||||||||||   ||| ||||||||||||||||| ||||| |||||||||||    
T  1532308 ctgacaccaacacgacaccacatataattacactgaattatgtaattttatcaaattatta 1532248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 330 - 364
Target Start/End: Original strand, 2140499 - 2140533
Alignment:
Q  330 ttacactgaattatgtcattttctcaaattattat 364  Q
    ||||| |||||||||||||||||||||||||||||    
T  2140499 ttacattgaattatgtcattttctcaaattattat 2140533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 320 - 358
Target Start/End: Original strand, 4420187 - 4420225
Alignment:
Q  320 acacctatgattacactgaattatgtcattttctcaaat 358  Q
    ||||||||| |||||||||||||| ||||||||||||||    
T  4420187 acacctatggttacactgaattatatcattttctcaaat 4420225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 360
Target Start/End: Complemental strand, 10158037 - 10157995
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaatta 360  Q
    |||||| | |||||||| |||||||||||||||||||||||||    
T  10158037 cgacacatgtgattacattgaattatgtcattttctcaaatta 10157995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 28715337 - 28715303
Alignment:
Q  329 attacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||||||||||||||||| |||||||||||    
T  28715337 attacactgaattatgtcattttttcaaattatta 28715303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 364
Target Start/End: Complemental strand, 29049930 - 29049892
Alignment:
Q  326 atgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||| |||||||||| ||||||||||||||||||    
T  29049930 atgattacattgaattatgtaattttctcaaattattat 29049892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Original strand, 31579242 - 31579276
Alignment:
Q  329 attacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||||||||||| |||||||||||||||||    
T  31579242 attacactgaattatgtgattttctcaaattatta 31579276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 364
Target Start/End: Original strand, 4859128 - 4859165
Alignment:
Q  327 tgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||| || ||||||||||||||||||||||||||    
T  4859128 tgattacattggattatgtcattttctcaaattattat 4859165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Complemental strand, 7086848 - 7086803
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| |||||||| |||||||| |||||||||||||||||    
T  7086848 cgacacatataattacactaaattatgtgattttctcaaattatta 7086803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Complemental strand, 9617487 - 9617442
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| |||||| |||||||||| |||||||||||||||||    
T  9617487 cgacacatataattacattgaattatgtgattttctcaaattatta 9617442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 357
Target Start/End: Complemental strand, 10031633 - 10031584
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaa 357  Q
    ||||| ||||| |||| | |||||||| ||||||||||||||||||||||    
T  10031633 gacactgacacaacacttgtgattacattgaattatgtcattttctcaaa 10031584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Complemental strand, 10842585 - 10842540
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| |||||||||||| |||||||| ||||| |||||||||||    
T  10842585 cgacacatatgattacactaaattatgtgattttttcaaattatta 10842540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 359
Target Start/End: Original strand, 11591876 - 11591917
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaatt 359  Q
    |||||| ||| ||||||||||||||||| |||||||||||||    
T  11591876 cgacacatataattacactgaattatgtgattttctcaaatt 11591917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 364
Target Start/End: Original strand, 13211258 - 13211333
Alignment:
Q  292 gtcggtgtctgacactgacaccgacac---gacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||||||||  ||||||| ||   ||| || ||||||| | | |||||||||||||||||||||||||||    
T  13211258 gtcggtgtctgacaccaacaccgagacaccgacgccgatgattatattaaattatgtcattttctcaaattattat 13211333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Complemental strand, 13851789 - 13851744
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| |||||||||||||| || |||||||||||||||||    
T  13851789 cgacacatataattacactgaattacgttattttctcaaattatta 13851744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 26178687 - 26178732
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| |||||||||||| |||||||| ||||| |||||||||||    
T  26178687 cgacacatatgattacactaaattatgtgattttatcaaattatta 26178732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 359
Target Start/End: Complemental strand, 26562742 - 26562701
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaatt 359  Q
    |||||| ||| ||||||||||||||||| |||||||||||||    
T  26562742 cgacacatataattacactgaattatgtgattttctcaaatt 26562701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 30866150 - 30866195
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| |||||| |||||||||| |||||||||||||||||    
T  30866150 cgacacatataattacattgaattatgtgattttctcaaattatta 30866195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 363
Target Start/End: Original strand, 17341671 - 17341715
Alignment:
Q  319 gacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    ||||| ||| ||||||||||||||||| ||||| |||||||||||    
T  17341671 gacacttataattacactgaattatgtgattttatcaaattatta 17341715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 363
Target Start/End: Complemental strand, 24832661 - 24832596
Alignment:
Q  296 gtgtctgacactgacaccgacacgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||||||| ||  |||||||||| ||| |||||||| ||||||   |||||||||||||||||    
T  24832661 gtgtctgacactgtca--gacacgacacatataattacactaaattataagattttctcaaattatta 24832596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 336 - 364
Target Start/End: Complemental strand, 29711297 - 29711269
Alignment:
Q  336 tgaattatgtcattttctcaaattattat 364  Q
    |||||||||||||||||||||||||||||    
T  29711297 tgaattatgtcattttctcaaattattat 29711269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 55; Significance: 2e-22; HSPs: 45)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 233 - 364
Target Start/End: Complemental strand, 52369909 - 52369782
Alignment:
Q  233 aacctatgaagcacgaacacttcttggatgaggtgtgtccccatgtcgaacacacatcggtcggtgtctgacactgacaccgacacgacacctatgatta 332  Q
    ||||||||||||||| ||||| || |||  |||||||||||  ||| | |||| |    ||||||||| || || |||||||||||||||||||||||||    
T  52369909 aacctatgaagcacggacactcctcggaataggtgtgtcccggtgttggacacgc----gtcggtgtccgataccgacaccgacacgacacctatgatta 52369814  T
Q  333 cactgaattatgtcattttctcaaattattat 364  Q
    || |||||||||| ||||||||||||||||||    
T  52369813 cattgaattatgtaattttctcaaattattat 52369782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 12704653 - 12704709
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||    
T  12704653 gacaccgacacgacacctatgattacattgaattatgtcattttttcaaattattat 12704709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 314 - 365
Target Start/End: Original strand, 3730167 - 3730218
Alignment:
Q  314 gacacgacacctatgattacactgaattatgtcattttctcaaattattata 365  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  3730167 gacacgacacctatgattacactgaattatgtcattatctcaaattattata 3730218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 25074852 - 25074796
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||| || |||||||||||||| |||||||||||||||||||||||||||    
T  25074852 gacaccgacacaacgcctatgattacactcaattatgtcattttctcaaattattat 25074796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 25892523 - 25892467
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||| |||||||||||||||||||||||||||||| ||||||||| ||||||||||    
T  25892523 gacactgacacgacacctatgattacactgaattatatcattttcttaaattattat 25892467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 317 - 363
Target Start/End: Complemental strand, 1830397 - 1830351
Alignment:
Q  317 acgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||    
T  1830397 acgacacctatgattacactgaattatgtcattttcttaaattatta 1830351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 20691372 - 20691326
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  20691372 cgacacatatgattacactgaattatgtcattttctcaaattattat 20691326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 315 - 364
Target Start/End: Complemental strand, 34189483 - 34189434
Alignment:
Q  315 acacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||||| |||||||||||| ||||||||||||||||||||||||    
T  34189483 acacgacacctacgattacactgaaatatgtcattttctcaaattattat 34189434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 312 - 364
Target Start/End: Complemental strand, 15864892 - 15864840
Alignment:
Q  312 ccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||||||||||||||||| |||||| ||||||| ||||||||||||    
T  15864892 ccgacacgacacctatgattacactaaattatatcattttttcaaattattat 15864840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 312 - 364
Target Start/End: Original strand, 24205041 - 24205093
Alignment:
Q  312 ccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||||| ||| ||||||||| ||||||||||||||||||||||||||    
T  24205041 ccgacacgacacttataattacactgtattatgtcattttctcaaattattat 24205093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 312 - 364
Target Start/End: Complemental strand, 25365521 - 25365469
Alignment:
Q  312 ccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||||| ||||||||||| |||||||||||| |||||||||||||||    
T  25365521 ccgacacgacacttatgattacaccgaattatgtcatattctcaaattattat 25365469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 317 - 364
Target Start/End: Complemental strand, 21149121 - 21149074
Alignment:
Q  317 acgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||| || ||||||||||||||||||||||||||||||||||||||    
T  21149121 acgacatctttgattacactgaattatgtcattttctcaaattattat 21149074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 309 - 364
Target Start/End: Complemental strand, 21211350 - 21211295
Alignment:
Q  309 acaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||||||||| || ||||||||||| ||||| ||||||||||||||||||    
T  21211350 acaccgacacgacacccataattacactgaactatgtaattttctcaaattattat 21211295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 308 - 363
Target Start/End: Original strand, 34307776 - 34307831
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||||||||||||| ||| ||||||||||| ||||| |||||||||||||||||    
T  34307776 gacaccgacacgacacttataattacactgaaatatgtgattttctcaaattatta 34307831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 302 - 360
Target Start/End: Original strand, 7931588 - 7931646
Alignment:
Q  302 gacactgacaccgacacgacacctatgattacactgaattatgtcattttctcaaatta 360  Q
    ||||||||||| |||||||||||||| |||||||||||||| || ||| ||||||||||    
T  7931588 gacactgacacagacacgacacctataattacactgaattacgttattctctcaaatta 7931646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 14223849 - 14223905
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||||||||| ||||| |||||| |||||| || |||||||||||||||||    
T  14223849 gacaccgacacgacacttatgaatacactaaattatatcgttttctcaaattattat 14223905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 41319306 - 41319362
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||||||||| ||  |||||| |||||||||||||||| ||||||||||||    
T  41319306 gacaccgacacgacacatacaattacattgaattatgtcattttttcaaattattat 41319362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 308 - 359
Target Start/End: Complemental strand, 21367340 - 21367289
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaatt 359  Q
    ||||||||||| ||| | ||||||||||| ||||||||||||||||||||||    
T  21367340 gacaccgacacaacaaccatgattacactaaattatgtcattttctcaaatt 21367289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 309 - 364
Target Start/End: Original strand, 25652028 - 25652083
Alignment:
Q  309 acaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||| ||||| |||||||| | ||||||||||||| ||||||||||||||||||||    
T  25652028 acactgacacaacacctataactacactgaattatatcattttctcaaattattat 25652083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 330 - 364
Target Start/End: Original strand, 16789668 - 16789702
Alignment:
Q  330 ttacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||||||||||||||||||||||||||||    
T  16789668 ttacactgaattatgtcattttctcaaattattat 16789702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 40150577 - 40150623
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||| |||||||||| |||||||| ||||||||||||||||||||    
T  40150577 cgacacatatgattacattgaattatatcattttctcaaattattat 40150623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 308 - 361
Target Start/End: Original strand, 51512179 - 51512232
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaattat 361  Q
    |||||||||||||||| ||||||| || |||||||||| ||||| |||||||||    
T  51512179 gacaccgacacgacacatatgattccattgaattatgtgattttatcaaattat 51512232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 233 - 285
Target Start/End: Complemental strand, 14209246 - 14209194
Alignment:
Q  233 aacctatgaagcacgaacacttcttggatgaggtgtgtccccatgtcgaacac 285  Q
    ||||||||||||||| ||||||||||||| |||||| |||| |||||| ||||    
T  14209246 aacctatgaagcacggacacttcttggattaggtgtatcccgatgtcgtacac 14209194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 363
Target Start/End: Original strand, 16192734 - 16192801
Alignment:
Q  296 gtgtctgacactgacaccgaca-cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||||| ||||| |||| | |||| ||| ||||||||||||||||| |||||||||||||||||    
T  16192734 gtgtctgacaccgacac-gacatcaacacatataattacactgaattatgttattttctcaaattatta 16192801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 364
Target Start/End: Complemental strand, 26665195 - 26665143
Alignment:
Q  312 ccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||| ||||| |||||| ||||| | |||||||||||||||||||||    
T  26665195 ccgacacgacgcctataattacagtgaatcacgtcattttctcaaattattat 26665143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 27903695 - 27903639
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||| |||| |||||||||| | |||||| || |||||||||||||||||    
T  27903695 gacaccgacacaacacttatgattacattaaattatatcgttttctcaaattattat 27903639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 361
Target Start/End: Complemental strand, 8039259 - 8039216
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattat 361  Q
    ||||||||||||||||| ||||| ||| ||||||||||||||||    
T  8039259 cgacacctatgattacattgaatcatgccattttctcaaattat 8039216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 313 - 364
Target Start/End: Complemental strand, 8903489 - 8903439
Alignment:
Q  313 cgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||||||| |||||||| ||| |||||||||||||||| ||||||    
T  8903489 cgacacgacacctataattacactaaat-atgtcattttctcaaaatattat 8903439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 355
Target Start/End: Original strand, 4704305 - 4704335
Alignment:
Q  325 tatgattacactgaattatgtcattttctca 355  Q
    |||||||||||||||||||||||||||||||    
T  4704305 tatgattacactgaattatgtcattttctca 4704335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 11252020 - 11251986
Alignment:
Q  329 attacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||||||||||| |||||||||||||||||    
T  11252020 attacactgaattatgtgattttctcaaattatta 11251986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 364
Target Start/End: Complemental strand, 12100326 - 12100277
Alignment:
Q  314 gacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||||||| ||||||||||||||| ||| ||| ||||||||||||    
T  12100326 gacacgacacctattattacactgaattatatca-tttgtcaaattattat 12100277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 13799557 - 13799511
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||| ||| |||||||| |||||||||||||||||||| ||||||    
T  13799557 cgacacatattattacacttaattatgtcattttctcaaactattat 13799511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 360
Target Start/End: Complemental strand, 20141153 - 20141107
Alignment:
Q  314 gacacgacacctatgattacactgaattatgtcattttctcaaatta 360  Q
    |||||||||| |||||||||| | |||||||||| ||||||||||||    
T  20141153 gacacgacacatatgattacattcaattatgtcagtttctcaaatta 20141107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 33006876 - 33006830
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||| ||||| |||||||||||| ||||| ||||||||||||    
T  33006876 cgacacctacgattaaactgaattatgtaattttatcaaattattat 33006830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Complemental strand, 7928503 - 7928458
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| ||||||||||||||||| ||||| |||||||||||    
T  7928503 cgacacatataattacactgaattatgtgattttttcaaattatta 7928458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 8039841 - 8039886
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| ||||||||||||||| | |||||||||||||||||    
T  8039841 cgacacatataattacactgaattatataattttctcaaattatta 8039886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Complemental strand, 8383310 - 8383265
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| ||||||||||||||| | |||||||||||||||||    
T  8383310 cgacacttataattacactgaattatatgattttctcaaattatta 8383265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 364
Target Start/End: Original strand, 9210840 - 9210877
Alignment:
Q  327 tgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||| || |||||||||||||||||||||||||||||    
T  9210840 tgattccattgaattatgtcattttctcaaattattat 9210877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Complemental strand, 10955005 - 10954960
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| | ||||||||||||||||||| ||||| |||||||||||    
T  10955005 cgacacttgtgattacactgaattatgtgattttttcaaattatta 10954960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 20503507 - 20503474
Alignment:
Q  329 attacactgaattatgtcattttctcaaattatt 362  Q
    ||||||||||||||||||||||| ||||||||||    
T  20503507 attacactgaattatgtcattttttcaaattatt 20503474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 364
Target Start/End: Complemental strand, 21861633 - 21861576
Alignment:
Q  307 tgacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||| || | |||| |||||||||||||||||||||||||||  |||||| ||||    
T  21861633 tgacaccaacgctacacttatgattacactgaattatgtcatttttccaaattgttat 21861576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 323 - 364
Target Start/End: Complemental strand, 28779610 - 28779569
Alignment:
Q  323 cctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||||||||||||||||||||| |||  |||||||    
T  28779610 cctatgattacactgaattatgtcattttatcatgttattat 28779569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 40697853 - 40697910
Alignment:
Q  308 gacaccgacac-gacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||| ||||| |||| ||| | |||||||||||||||||||| ||||||||    
T  40697853 gacaccgacaccgacacatatggttagattgaattatgtcattttctcatattattat 40697910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 363
Target Start/End: Original strand, 32804547 - 32804591
Alignment:
Q  319 gacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    ||||| ||| |||||||| |||||||| |||||||||||||||||    
T  32804547 gacacatataattacactaaattatgtgattttctcaaattatta 32804591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 363
Target Start/End: Original strand, 49505161 - 49505205
Alignment:
Q  319 gacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    ||||| ||| |||||||| |||||||| |||||||||||||||||    
T  49505161 gacacatataattacactaaattatgtgattttctcaaattatta 49505205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 6e-22; HSPs: 41)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 302 - 367
Target Start/End: Original strand, 29812654 - 29812719
Alignment:
Q  302 gacactgacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattatacg 367  Q
    ||||| ||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  29812654 gacaccgacaccgacacgacacctatgattacactaaattatatcattttctcaaattattatacg 29812719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 308 - 360
Target Start/End: Complemental strand, 23930282 - 23930230
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaatta 360  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  23930282 gacaccgacacaacacctatgattacactgaattatgtcattttctcaaatta 23930230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 308 - 361
Target Start/End: Original strand, 7133274 - 7133327
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaattat 361  Q
    |||||||||||  |||||||||||||||||||||||||||||||||||||||||    
T  7133274 gacaccgacacaccacctatgattacactgaattatgtcattttctcaaattat 7133327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 43250056 - 43250000
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||    
T  43250056 gacaccgacacgacacttataattacactgtattatgtcattttctcaaattattat 43250000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 312 - 364
Target Start/End: Complemental strand, 12278894 - 12278842
Alignment:
Q  312 ccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||||| ||| ||||||||||||||||||||||||| ||||||||||    
T  12278894 ccgacacgacacatataattacactgaattatgtcattttcttaaattattat 12278842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 17780080 - 17780136
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||||||||||||| ||||||  ||||||||||||||||| ||||||||||    
T  17780080 gacaccgacacgacacctattattacatagaattatgtcattttcttaaattattat 17780136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 312 - 364
Target Start/End: Complemental strand, 23751959 - 23751907
Alignment:
Q  312 ccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||||||||||||||||| |||||| ||||||| ||||||||||||    
T  23751959 ccgacacgacacctatgattacactaaattatatcattttatcaaattattat 23751907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 38804551 - 38804607
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||| ||||||||||||||||||| ||| ||||||||||||||| ||||||||||    
T  38804551 gacaccaacacgacacctatgattaccctggattatgtcattttctgaaattattat 38804607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 292 - 364
Target Start/End: Original strand, 22683733 - 22683807
Alignment:
Q  292 gtcggtgtctgacactgacaccgacac--gacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||| |||| ||||||||||| |||||  ||||||||||||| ||||||||||| |||| |||||||||||||||    
T  22683733 gtcgatgtccgacactgacactgacacacgacacctatgattgcactgaattatatcatattctcaaattattat 22683807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 306 - 364
Target Start/End: Complemental strand, 5938537 - 5938479
Alignment:
Q  306 ctgacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||||| |||||||| |||| |||||||||||| ||||| ||||||||||||    
T  5938537 ctgacaccgacacaacacctataattatactgaattatgttattttatcaaattattat 5938479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 360
Target Start/End: Original strand, 18233604 - 18233646
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaatta 360  Q
    |||||||||| ||||||||||||||||||||||||||||||||    
T  18233604 cgacacctataattacactgaattatgtcattttctcaaatta 18233646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 38134412 - 38134458
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||| |||||||||| |||||||||||||||||||||||||||||    
T  38134412 cgacacatatgattacattgaattatgtcattttctcaaattattat 38134458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 4017790 - 4017846
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||| ||||||||| |||||||||||| |||||| || |||||||||||||||||    
T  4017790 gacaccaacacgacacttatgattacactaaattatatcgttttctcaaattattat 4017846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 10230069 - 10230125
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||| |||||||| ||||  ||||||||||||||||||||| |||||||||||||    
T  10230069 gacaccaacacgacatctatacttacactgaattatgtcatttcctcaaattattat 10230125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 2525839 - 2525896
Alignment:
Q  308 gacaccgacac-gacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||| ||||| |||||||| | ||||||||||||||| |||||||||||||    
T  2525839 gacaccgacaccgacacatatgattatattgaattatgtcatttgctcaaattattat 2525896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 319 - 364
Target Start/End: Complemental strand, 4909203 - 4909158
Alignment:
Q  319 gacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||| |||||||||| |||||||||| ||||||||||||||||||    
T  4909203 gacacatatgattacaatgaattatgtaattttctcaaattattat 4909158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 327 - 364
Target Start/End: Original strand, 44172905 - 44172942
Alignment:
Q  327 tgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||| |||||||||||||||||||||||||||||    
T  44172905 tgattacattgaattatgtcattttctcaaattattat 44172942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 36314635 - 36314679
Alignment:
Q  320 acacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||| |||||||||| |||| ||||||||||||||||||||||||    
T  36314635 acacatatgattacattgaaatatgtcattttctcaaattattat 36314679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 41229304 - 41229348
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatt 362  Q
    |||| |||||||||| || ||||||||||||||||||||||||||    
T  41229304 cgacgcctatgattatacagaattatgtcattttctcaaattatt 41229348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 315 - 362
Target Start/End: Complemental strand, 13427632 - 13427585
Alignment:
Q  315 acacgacacctatgattacactgaattatgtcattttctcaaattatt 362  Q
    |||||||| ||||||||| ||| |||||||||||||| ||||||||||    
T  13427632 acacgacatctatgattatactaaattatgtcattttttcaaattatt 13427585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 363
Target Start/End: Complemental strand, 30813863 - 30813820
Alignment:
Q  320 acacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| | ||||||||||||||||| |||||||||||||||||    
T  30813863 acacctgtaattacactgaattatgtaattttctcaaattatta 30813820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 2424656 - 2424622
Alignment:
Q  329 attacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||||||||||| |||||||||||||||||    
T  2424656 attacactgaattatgtgattttctcaaattatta 2424622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 364
Target Start/End: Original strand, 21247750 - 21247788
Alignment:
Q  326 atgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||| ||||||| |||||||||||||||||||||    
T  21247750 atgattacattgaattacgtcattttctcaaattattat 21247788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 21880194 - 21880160
Alignment:
Q  329 attacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||||||||||| |||||||||||||||||    
T  21880194 attacactgaattatgtaattttctcaaattatta 21880160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 23128667 - 23128713
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||| ||||||||||||||||||| |  |||||||||||||||||    
T  23128667 cgacacatatgattacactgaattatatggttttctcaaattattat 23128713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 27945083 - 27945049
Alignment:
Q  329 attacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||||||||||| |||||||||||||||||    
T  27945083 attacactgaattatgtaattttctcaaattatta 27945049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Original strand, 29787386 - 29787420
Alignment:
Q  329 attacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||||||||||| |||||||||||||||||    
T  29787386 attacactgaattatgtgattttctcaaattatta 29787420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 32308162 - 32308128
Alignment:
Q  329 attacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||||||||||| |||||||||||||||||    
T  32308162 attacactgaattatgtgattttctcaaattatta 32308128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Complemental strand, 5835300 - 5835255
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| ||||||||||||||||| ||||||||||| |||||    
T  5835300 cgacacatataattacactgaattatgttattttctcaaactatta 5835255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 7328697 - 7328742
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| |||||||| |||||||| |||||||||||||||||    
T  7328697 cgacacatataattacactaaattatgttattttctcaaattatta 7328742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Complemental strand, 19992054 - 19992009
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| ||||||||||| ||||| |||||||||||||||||    
T  19992054 cgacacttataattacactgaaatatgtgattttctcaaattatta 19992009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Complemental strand, 20549844 - 20549799
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| |||||||||||||| || |||||||||||||||||    
T  20549844 cgacacatataattacactgaattacgtgattttctcaaattatta 20549799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 27732245 - 27732290
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| ||||||||||||||||| ||||||| |||||||||    
T  27732245 cgacacatataattacactgaattatgtaattttcttaaattatta 27732290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 30731079 - 30731046
Alignment:
Q  329 attacactgaattatgtcattttctcaaattatt 362  Q
    ||||||||||||||||| ||||||||||||||||    
T  30731079 attacactgaattatgtgattttctcaaattatt 30731046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 364
Target Start/End: Original strand, 11591997 - 11592057
Alignment:
Q  304 cactgacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||| |||| |||| |||||||||||| ||||||||| || || |||| ||||||||||||    
T  11591997 cactaacactgacatgacacctatgataacactgaataatatcgttttttcaaattattat 11592057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 360
Target Start/End: Complemental strand, 17307944 - 17307904
Alignment:
Q  320 acacctatgattacactgaattatgtcattttctcaaatta 360  Q
    |||| ||| ||||||||||||||||| ||||||||||||||    
T  17307944 acacatataattacactgaattatgttattttctcaaatta 17307904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 363
Target Start/End: Complemental strand, 17851483 - 17851439
Alignment:
Q  319 gacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    ||||| ||| ||||||||||||||||| ||||||| |||||||||    
T  17851483 gacacatataattacactgaattatgtgattttctaaaattatta 17851439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 362
Target Start/End: Original strand, 19930947 - 19930991
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatt 362  Q
    |||||| ||| |||||| |||||||||||||||| ||||||||||    
T  19930947 cgacacatataattacattgaattatgtcattttatcaaattatt 19930991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 358
Target Start/End: Original strand, 22602716 - 22602756
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaat 358  Q
    |||||| ||| ||||||||||||||||| ||||||||||||    
T  22602716 cgacacatataattacactgaattatgtgattttctcaaat 22602756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 363
Target Start/End: Complemental strand, 22868094 - 22868050
Alignment:
Q  319 gacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    ||||| ||| ||||||||||||||||| ||||||||| |||||||    
T  22868094 gacacatataattacactgaattatgtgattttctcatattatta 22868050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 361
Target Start/End: Complemental strand, 30730967 - 30730935
Alignment:
Q  329 attacactgaattatgtcattttctcaaattat 361  Q
    ||||||||||| |||||||||||||||||||||    
T  30730967 attacactgaactatgtcattttctcaaattat 30730935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 53; Significance: 2e-21; HSPs: 41)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 308 - 368
Target Start/End: Complemental strand, 43554584 - 43554524
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattatacgt 368  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  43554584 gacaccgacacgacacctatgattacactaaattatatcattttctcaaattattatacgt 43554524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 294 - 364
Target Start/End: Original strand, 18607079 - 18607149
Alignment:
Q  294 cggtgtctgacactgacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||| |||||  |||| ||||||||||||||||||||| |||||||||| ||||||||||||||||||    
T  18607079 cggtgtcggacaccaacacagacacgacacctatgattacattgaattatgttattttctcaaattattat 18607149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 308 - 362
Target Start/End: Original strand, 39695995 - 39696049
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaattatt 362  Q
    ||||||||||||||||||||||||||||| |||||| ||||||||||||||||||    
T  39695995 gacaccgacacgacacctatgattacactaaattatatcattttctcaaattatt 39696049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 307 - 364
Target Start/End: Original strand, 5467973 - 5468030
Alignment:
Q  307 tgacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||    
T  5467973 tgacaccgacacgacacctataattacactgaattatgtgattttatcaaattattat 5468030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 308 - 357
Target Start/End: Original strand, 26205756 - 26205805
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaa 357  Q
    |||||| |||||||||||||||||||||||||||||||||||||||||||    
T  26205756 gacaccaacacgacacctatgattacactgaattatgtcattttctcaaa 26205805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 314 - 363
Target Start/End: Complemental strand, 31264495 - 31264446
Alignment:
Q  314 gacacgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  31264495 gacacgacacttatgattacactgaattatgtcattttctcaaattatta 31264446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 308 - 366
Target Start/End: Complemental strand, 25863267 - 25863209
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattatac 366  Q
    ||||| |||||||||| ||| ||||||||||||||| ||||||||||||||||||||||    
T  25863267 gacactgacacgacacttataattacactgaattatatcattttctcaaattattatac 25863209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 311 - 363
Target Start/End: Complemental strand, 21137749 - 21137697
Alignment:
Q  311 accgacacgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||||||||||||||| |||||||||| |||||||||||| |||||||    
T  21137749 accgacacgacacctatgatttcactgaattacgtcattttctcagattatta 21137697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 28588680 - 28588725
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||    
T  28588680 cgacacctataattacactgaattatgtgattttctcaaattatta 28588725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 312 - 364
Target Start/End: Original strand, 7997166 - 7997218
Alignment:
Q  312 ccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||||| ||| ||||||||| ||||| ||||||||||||||||||||    
T  7997166 ccgacacgacacttataattacactgtattatatcattttctcaaattattat 7997218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 325 - 364
Target Start/End: Original strand, 2577193 - 2577232
Alignment:
Q  325 tatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  2577193 tatgattacactaaattatgtcattttctcaaattattat 2577232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 2548440 - 2548394
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||| ||||||||||||||||||||| |||||||| |||||||||    
T  2548440 cgacacttatgattacactgaattatgtaattttctctaattattat 2548394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 364
Target Start/End: Complemental strand, 4344787 - 4344749
Alignment:
Q  326 atgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||||||||||||||||||| ||||||||||||    
T  4344787 atgattacactgaattatgtcattttttcaaattattat 4344749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 364
Target Start/End: Original strand, 11596469 - 11596507
Alignment:
Q  326 atgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  11596469 atgattacattgaattatgtcattttctcaaattattat 11596507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 18288053 - 18288103
Alignment:
Q  314 gacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||| |||||||||||||| ||||| ||| |||||||||||||||||||||    
T  18288053 gacatgacacctatgattatactgagttaagtcattttctcaaattattat 18288103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 18586291 - 18586340
Alignment:
Q  314 gacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||||||| ||||||||| ||||||||||||| ||||||||||||    
T  18586291 gacacgacacctataattacactgtattatgtcatttt-tcaaattattat 18586340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 322 - 364
Target Start/End: Complemental strand, 42469270 - 42469228
Alignment:
Q  322 acctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||||||| || ||||||||||||||||||||||||    
T  42469270 acctatgattacactaaaatatgtcattttctcaaattattat 42469228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 23015995 - 23016040
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||||||| ||||||||||||||||| |||||||||||| ||||    
T  23015995 cgacacctataattacactgaattatgtgattttctcaaatgatta 23016040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 363
Target Start/End: Complemental strand, 3966578 - 3966511
Alignment:
Q  296 gtgtctgacactgacaccgacac-gacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    ||||| ||||||||||| ||||| ||||| ||| ||||||||||||| ||| |||||||||||||||||    
T  3966578 gtgtccgacactgacac-gacaccgacacatataattacactgaattgtgtgattttctcaaattatta 3966511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 360
Target Start/End: Original strand, 21194213 - 21194253
Alignment:
Q  320 acacctatgattacactgaattatgtcattttctcaaatta 360  Q
    ||||| |||||||||||||||||||| ||||||||||||||    
T  21194213 acaccaatgattacactgaattatgtgattttctcaaatta 21194253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 28296379 - 28296335
Alignment:
Q  320 acacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||| ||||| |||| |||||||||||||||||||||||||||||    
T  28296379 acacatatgagtacattgaattatgtcattttctcaaattattat 28296335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 320 - 363
Target Start/End: Original strand, 6471897 - 6471940
Alignment:
Q  320 acacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||| ||| ||||||||||||||||| |||||||||||||||||    
T  6471897 acacatataattacactgaattatgtgattttctcaaattatta 6471940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 329 - 364
Target Start/End: Complemental strand, 18162097 - 18162062
Alignment:
Q  329 attacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||||||||||||||||| ||||||||||    
T  18162097 attacactgaattatgtcattttcttaaattattat 18162062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 321 - 364
Target Start/End: Original strand, 21577117 - 21577160
Alignment:
Q  321 cacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||| |||||||| |||||||| ||||||||||||||||||    
T  21577117 cacctattattacacttaattatgttattttctcaaattattat 21577160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 329 - 364
Target Start/End: Original strand, 24906318 - 24906353
Alignment:
Q  329 attacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||||||||||||||| ||||||||||||    
T  24906318 attacactgaattatgtcattttttcaaattattat 24906353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 313 - 364
Target Start/End: Original strand, 37472598 - 37472649
Alignment:
Q  313 cgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||| |||||||| |  |||||||||||||||||| |||||||||    
T  37472598 cgacacgacacatatgattatatcgaattatgtcattttctcgaattattat 37472649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 325 - 360
Target Start/End: Original strand, 43208287 - 43208322
Alignment:
Q  325 tatgattacactgaattatgtcattttctcaaatta 360  Q
    |||||||||| |||||||||||||||||||||||||    
T  43208287 tatgattacattgaattatgtcattttctcaaatta 43208322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 326 - 364
Target Start/End: Complemental strand, 2419902 - 2419864
Alignment:
Q  326 atgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||||||||| ||| ||||||||||||||||||    
T  2419902 atgattacactgaattgtgtaattttctcaaattattat 2419864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 19737488 - 19737534
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||| ||||||| || |||||||||| ||||||||||||||||||    
T  19737488 cgacacatatgattgcattgaattatgtaattttctcaaattattat 19737534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 27932277 - 27932243
Alignment:
Q  329 attacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||||||||||| |||||||||||||||||    
T  27932277 attacactgaattatgtaattttctcaaattatta 27932243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 326 - 363
Target Start/End: Original strand, 2039863 - 2039900
Alignment:
Q  326 atgattacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||| ||||| ||||||||||||||||||||||    
T  2039863 atgattacattgaatcatgtcattttctcaaattatta 2039900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Complemental strand, 30098379 - 30098334
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    ||||| |||| |||||| |||||||||| |||||||||||||||||    
T  30098379 cgacatctataattacattgaattatgtgattttctcaaattatta 30098334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 30502394 - 30502439
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| |||||||||||||| || |||||||||||||||||    
T  30502394 cgacacatataattacactgaattaagtgattttctcaaattatta 30502439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 30542737 - 30542782
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| |||||||||||||| || |||||||||||||||||    
T  30542737 cgacacatataattacactgaattaagtgattttctcaaattatta 30542782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Complemental strand, 36838596 - 36838551
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| |||||||| |||||||| |||||||||||||||||    
T  36838596 cgacacatataattacactaaattatgtaattttctcaaattatta 36838551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 41091263 - 41091308
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| ||||||||||||||||| |||||||||||| ||||    
T  41091263 cgacacatataattacactgaattatgtgattttctcaaatcatta 41091308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 292 - 340
Target Start/End: Original strand, 12594711 - 12594759
Alignment:
Q  292 gtcggtgtctgacactgacaccgacacgacacctatgattacactgaat 340  Q
    ||||||||| ||||||||||| ||||||| | ||||||||||| |||||    
T  12594711 gtcggtgtcagacactgacacagacacgatatctatgattacattgaat 12594759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 19293431 - 19293475
Alignment:
Q  320 acacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||| |||||||||||| |||||||| ||||||| ||||||||||    
T  19293431 acacatatgattacacttaattatgttattttcttaaattattat 19293475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 361
Target Start/End: Complemental strand, 19438385 - 19438353
Alignment:
Q  329 attacactgaattatgtcattttctcaaattat 361  Q
    ||||||||||||||||| |||||||||||||||    
T  19438385 attacactgaattatgtgattttctcaaattat 19438353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 38749571 - 38749615
Alignment:
Q  320 acacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||| ||| |||||| |||||||||||||||| ||||||||||||    
T  38749571 acacatataattacattgaattatgtcattttttcaaattattat 38749615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 336 - 364
Target Start/End: Original strand, 41558707 - 41558735
Alignment:
Q  336 tgaattatgtcattttctcaaattattat 364  Q
    |||||||||||||||||||||||||||||    
T  41558707 tgaattatgtcattttctcaaattattat 41558735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 292 - 364
Target Start/End: Original strand, 8033 - 8105
Alignment:
Q  292 gtcggtgtctgacactgacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||| |||| ||||| || |||||||||| ||||||| |||||||||||||||||||||||||||||||||||    
T  8033 gtcgatgtccgacaccgaaaccgacacgatacctatgtttacactgaattatgtcattttctcaaattattat 8105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 49; Significance: 6e-19; HSPs: 40)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 40064014 - 40063958
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||||||| |||||||||||| |||||||||||||||||||||||||||||    
T  40064014 gacaccgacacgacgcctatgattacaatgaattatgtcattttctcaaattattat 40063958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 312 - 367
Target Start/End: Complemental strand, 39820488 - 39820433
Alignment:
Q  312 ccgacacgacacctatgattacactgaattatgtcattttctcaaattattatacg 367  Q
    ||||||||||||||||||||||||| |||||| |||||||||||||||||||||||    
T  39820488 ccgacacgacacctatgattacactaaattatatcattttctcaaattattatacg 39820433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 292 - 364
Target Start/End: Original strand, 13009473 - 13009545
Alignment:
Q  292 gtcggtgtctgacactgacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||||||||  ||||||||||||||| |||||||||||| |||||| |  |||||||||||||||||    
T  13009473 gtcggtgtctgacacctacaccgacacgacacttatgattacactaaattatattgttttctcaaattattat 13009545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 296 - 364
Target Start/End: Complemental strand, 13845309 - 13845241
Alignment:
Q  296 gtgtctgacactgacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||| ||||| ||||| |||||||||||||||||||| || |||||| ||||||||||||||||||||    
T  13845309 gtgtccgacaccgacacagacacgacacctatgattactctaaattatatcattttctcaaattattat 13845241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 312 - 364
Target Start/End: Original strand, 35431140 - 35431192
Alignment:
Q  312 ccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||||    
T  35431140 ccgacacgacacctatgattacactaaaatatgtcattttctcaaattattat 35431192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 308 - 364
Target Start/End: Complemental strand, 44067579 - 44067523
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||||||||| ||| ||||||||| ||||||||||||||||||||||||||    
T  44067579 gacaccgacacgacacttataattacactgtattatgtcattttctcaaattattat 44067523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 28883880 - 28883930
Alignment:
Q  314 gacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||| ||||||||||||| ||||||||||||||||||||||||||||||||    
T  28883880 gacaagacacctatgattccactgaattatgtcattttctcaaattattat 28883930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 312 - 364
Target Start/End: Complemental strand, 1676771 - 1676719
Alignment:
Q  312 ccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||||||||||||||||| || |||||||||||| |||||||||||    
T  1676771 ccgacacgacacctatgattacactaaaatatgtcattttcacaaattattat 1676719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 306 - 364
Target Start/End: Original strand, 14513168 - 14513226
Alignment:
Q  306 ctgacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||||| | | |||||||||| ||||||||||| ||||||||||||||||||    
T  14513168 ctgacaccgacaccaaatctatgattacgctgaattatgtaattttctcaaattattat 14513226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 296 - 362
Target Start/End: Original strand, 16869699 - 16869765
Alignment:
Q  296 gtgtctgacactgacaccgacacgacacctatgattacactgaattatgtcattttctcaaattatt 362  Q
    ||||| ||||| |||||| |||||||||| ||||||| | |||||||||||||||||| ||||||||    
T  16869699 gtgtccgacaccgacaccaacacgacaccaatgattatagtgaattatgtcattttcttaaattatt 16869765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 319 - 363
Target Start/End: Complemental strand, 3025603 - 3025559
Alignment:
Q  319 gacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||| ||||||||||||||||| |||||||||||||||||    
T  3025603 gacacctataattacactgaattatgtgattttctcaaattatta 3025559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 312 - 364
Target Start/End: Original strand, 30068028 - 30068080
Alignment:
Q  312 ccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||| || |||||| ||||| |||||||||||||||||||||||||||||||    
T  30068028 ccgactcggcacctacgattatactgaattatgtcattttctcaaattattat 30068080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 309 - 364
Target Start/End: Complemental strand, 8017548 - 8017493
Alignment:
Q  309 acaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||| ||||||||| ||||||||||||| |||||||||||||| ||| ||||||||    
T  8017548 acactgacacgacatctatgattacactcaattatgtcattttttcatattattat 8017493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 363
Target Start/End: Original strand, 12559119 - 12559157
Alignment:
Q  325 tatgattacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||||||||||||| |||||||||||||||||||    
T  12559119 tatgattacactgaattatatcattttctcaaattatta 12559157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 325 - 363
Target Start/End: Original strand, 29198492 - 29198530
Alignment:
Q  325 tatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||||||| ||||||||||||||||||||||||||||    
T  29198492 tatgattacattgaattatgtcattttctcaaattatta 29198530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 364
Target Start/End: Complemental strand, 3658203 - 3658154
Alignment:
Q  315 acacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||||||||||||||||| ||  | ||||||||||||||||||    
T  3658203 acacgacacctatgattacactgaactacattattttctcaaattattat 3658154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 308 - 357
Target Start/End: Original strand, 26915236 - 26915285
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaa 357  Q
    |||||||||||||||| | |||||||| | ||||||||||||||||||||    
T  26915236 gacaccgacacgacacttgtgattacattaaattatgtcattttctcaaa 26915285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 363
Target Start/End: Complemental strand, 34897138 - 34897093
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| ||||||||||||||||| |||||||||||||||||    
T  34897138 cgacacatataattacactgaattatgtgattttctcaaattatta 34897093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 320 - 364
Target Start/End: Complemental strand, 3508103 - 3508059
Alignment:
Q  320 acacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||| |||||||||| |||||||||| ||||||||||||||||||    
T  3508103 acacatatgattacattgaattatgttattttctcaaattattat 3508059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 292 - 364
Target Start/End: Complemental strand, 3911189 - 3911117
Alignment:
Q  292 gtcggtgtctgacactgacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||| || || |||||| ||||||||| ||||||| ||||||||||||| ||||| | |||| |||||    
T  3911189 gtcggtgtccgataccgacaccaacacgacacttatgatttcactgaattatgtgattttattaaatgattat 3911117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 365
Target Start/End: Complemental strand, 12985438 - 12985398
Alignment:
Q  325 tatgattacactgaattatgtcattttctcaaattattata 365  Q
    |||||||||| |||||||||| |||||||||||||||||||    
T  12985438 tatgattacattgaattatgtgattttctcaaattattata 12985398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 303 - 359
Target Start/End: Original strand, 26609756 - 26609812
Alignment:
Q  303 acactgacaccgacacgacacctatgattacactgaattatgtcattttctcaaatt 359  Q
    ||||||||||||||| | ||||||| |||||||||| |||| ||||||| |||||||    
T  26609756 acactgacaccgacatgtcacctataattacactgagttatatcattttttcaaatt 26609812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 329 - 364
Target Start/End: Original strand, 34201063 - 34201098
Alignment:
Q  329 attacactgaattatgtcattttctcaaattattat 364  Q
    |||||| |||||||||||||||||||||||||||||    
T  34201063 attacattgaattatgtcattttctcaaattattat 34201098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 325 - 364
Target Start/End: Original strand, 37225756 - 37225795
Alignment:
Q  325 tatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||| |||||||||| ||||||||||||||||||    
T  37225756 tatgattacattgaattatgttattttctcaaattattat 37225795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 4611576 - 4611542
Alignment:
Q  329 attacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||||||||||| |||||||||||||||||    
T  4611576 attacactgaattatgttattttctcaaattatta 4611542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 7658505 - 7658471
Alignment:
Q  329 attacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||||||||||| |||||||||||||||||    
T  7658505 attacactgaattatgtaattttctcaaattatta 7658471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 13203683 - 13203649
Alignment:
Q  329 attacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||||||||||| |||||||||||||||||    
T  13203683 attacactgaattatgtaattttctcaaattatta 13203649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 14134741 - 14134707
Alignment:
Q  329 attacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||||||||||| |||||||||||||||||    
T  14134741 attacactgaattatgtgattttctcaaattatta 14134707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 14692512 - 14692467
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||  |||||||||||||||||| ||||||||||||||||    
T  14692512 cgacacctatagttacactgaattatgtca-tttctcaaattattat 14692467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 363
Target Start/End: Complemental strand, 18646218 - 18646180
Alignment:
Q  325 tatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||||||||||||| |||||||||| |||||||||||    
T  18646218 tatgattacactgaatcatgtcattttttcaaattatta 18646180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 33382025 - 33382071
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||| ||| ||||| ||||||||||||||||||| ||||||||||    
T  33382025 cgacacatataattactctgaattatgtcattttcttaaattattat 33382071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 4786344 - 4786389
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| ||||||||||||||||| ||||||| |||||||||    
T  4786344 cgacacatataattacactgaattatgtgattttcttaaattatta 4786389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 11927092 - 11927137
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| ||||||||||||||||| ||||| |||||||||||    
T  11927092 cgacacatataattacactgaattatgtgattttatcaaattatta 11927137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 13844602 - 13844647
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| |||||||| |||||||| |||||||||||||||||    
T  13844602 cgacacatataattacactcaattatgtgattttctcaaattatta 13844647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 20679401 - 20679446
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| ||||||||||| ||||| |||||||||||||||||    
T  20679401 cgacacttataattacactgaactatgtgattttctcaaattatta 20679446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 31236583 - 31236628
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| |||||| |||||||||| |||||||||||||||||    
T  31236583 cgacacatataattacattgaattatgtgattttctcaaattatta 31236628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 329 - 362
Target Start/End: Complemental strand, 40332233 - 40332200
Alignment:
Q  329 attacactgaattatgtcattttctcaaattatt 362  Q
    ||||||||||||||||| ||||||||||||||||    
T  40332233 attacactgaattatgtgattttctcaaattatt 40332200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 361
Target Start/End: Complemental strand, 10441245 - 10441213
Alignment:
Q  329 attacactgaattatgtcattttctcaaattat 361  Q
    |||||| ||||||||||||||||||||||||||    
T  10441245 attacattgaattatgtcattttctcaaattat 10441213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 363
Target Start/End: Original strand, 24362209 - 24362253
Alignment:
Q  319 gacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    ||||| ||| ||||||||||||||||| ||| |||||||||||||    
T  24362209 gacacatataattacactgaattatgtgattctctcaaattatta 24362253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 364
Target Start/End: Complemental strand, 28819266 - 28819198
Alignment:
Q  296 gtgtctgacactgacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||| |||||  |  |||||| ||||||| || ||| ||||| |||||||||||||||||||    
T  28819266 gtgtctgacaccgacacaaaaccgacacatatgattgcattgagttatgccattttctcaaattattat 28819198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 49; Significance: 6e-19; HSPs: 46)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 42004943 - 42004999
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||    
T  42004943 gacaccgacacaacacctatgattacactaaattatgtcattttctcaaattattat 42004999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 6936396 - 6936452
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||| ||||||||||||||||||||||| |||||||||||||||||| ||||||||    
T  6936396 gacacagacacgacacctatgattacacttaattatgtcattttctcagattattat 6936452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 309 - 365
Target Start/End: Original strand, 39101179 - 39101235
Alignment:
Q  309 acaccgacacgacacctatgattacactgaattatgtcattttctcaaattattata 365  Q
    ||||||| ||||||||||| |||||||| |||||||| |||||||||||||||||||    
T  39101179 acaccgaaacgacacctataattacacttaattatgttattttctcaaattattata 39101235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 40747769 - 40747825
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||| ||| ||||||||| |||||| |||||||||||||||||||||||||||||    
T  40747769 gacaccaacatgacacctataattacattgaattatgtcattttctcaaattattat 40747825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 310 - 364
Target Start/End: Complemental strand, 21145528 - 21145473
Alignment:
Q  310 caccgacacgacacctatgattacactgaattatgtca-ttttctcaaattattat 364  Q
    |||||||||||| ||||||||||||||||||||||||| |||| ||||||||||||    
T  21145528 caccgacacgacgcctatgattacactgaattatgtcatttttttcaaattattat 21145473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 314 - 364
Target Start/End: Original strand, 22794080 - 22794130
Alignment:
Q  314 gacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||||||| ||||||||| ||||||||||||| ||||||||||||    
T  22794080 gacacgacacctataattacactgtattatgtcattttttcaaattattat 22794130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 292 - 363
Target Start/End: Original strand, 17831514 - 17831582
Alignment:
Q  292 gtcggtgtctgacactgacaccgacacgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||| |||||||||||    ||||||| |||||||||||||||| |||| |||||||||||||||||    
T  17831514 gtcggtgtccgacactgacacg---acgacacatatgattacactgaataatgtgattttctcaaattatta 17831582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 363
Target Start/End: Complemental strand, 36878514 - 36878469
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||||||| ||||||||||||||||| |||||||||||||||||    
T  36878514 cgacacctataattacactgaattatgtgattttctcaaattatta 36878469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 326 - 364
Target Start/End: Complemental strand, 3921712 - 3921674
Alignment:
Q  326 atgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||| |||||||||||||||||||||||||||||    
T  3921712 atgattacattgaattatgtcattttctcaaattattat 3921674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 11412774 - 11412820
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||||| ||| |||||||||||||||||||| ||||||||    
T  11412774 cgacacctatgatcacattgaattatgtcattttctcatattattat 11412820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 364
Target Start/End: Original strand, 24176373 - 24176419
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||| |||||||||||| |||| ||||||||||||||||||    
T  24176373 cgacacctataattacactgaatgatgttattttctcaaattattat 24176419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 330 - 364
Target Start/End: Complemental strand, 42325601 - 42325567
Alignment:
Q  330 ttacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||||||||||||||||||||||||||||    
T  42325601 ttacactgaattatgtcattttctcaaattattat 42325567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 1864886 - 1864931
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| ||||||||||||||||| |||||||||||||||||    
T  1864886 cgacacatataattacactgaattatgtgattttctcaaattatta 1864931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 315 - 364
Target Start/End: Original strand, 11634127 - 11634176
Alignment:
Q  315 acacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||||||||||||||||| | ||||||||  |||||||||||||||||    
T  11634127 acacgacacctatgattacattaaattatgttgttttctcaaattattat 11634176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 20157356 - 20157401
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||||||||||||||||||||| ||||||||| |||||||    
T  20157356 cgacacatatgattacactgaattatgtgattttctcacattatta 20157401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 363
Target Start/End: Original strand, 398772 - 398816
Alignment:
Q  319 gacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||| ||||||||||||||||| ||||| |||||||||||    
T  398772 gacacctataattacactgaattatgtgattttttcaaattatta 398816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 313 - 361
Target Start/End: Complemental strand, 6574047 - 6573999
Alignment:
Q  313 cgacacgacacctatgattacactgaattatgtcattttctcaaattat 361  Q
    |||||| ||||||||||||||||| |||||| ||||| |||||||||||    
T  6574047 cgacacaacacctatgattacactaaattatatcattgtctcaaattat 6573999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 363
Target Start/End: Original strand, 7918218 - 7918262
Alignment:
Q  319 gacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    ||||| ||| ||||||||||||||||| |||||||||||||||||    
T  7918218 gacacatataattacactgaattatgtgattttctcaaattatta 7918262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 328 - 364
Target Start/End: Complemental strand, 11571628 - 11571592
Alignment:
Q  328 gattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||| |||||||||||||||||||||||||||||    
T  11571628 gattacattgaattatgtcattttctcaaattattat 11571592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 319 - 363
Target Start/End: Original strand, 30847727 - 30847771
Alignment:
Q  319 gacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    ||||| |||||||||| |||||||||||||||| |||||||||||    
T  30847727 gacacatatgattacattgaattatgtcattttttcaaattatta 30847771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 361
Target Start/End: Complemental strand, 2445923 - 2445880
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattat 361  Q
    |||||| |||||||| | ||||||||||||||||||||||||||    
T  2445923 cgacacatatgattaaattgaattatgtcattttctcaaattat 2445880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 301 - 363
Target Start/End: Complemental strand, 10233324 - 10233261
Alignment:
Q  301 tgacactgacaccgacac-gacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| |||||| |||| ||||| ||| ||||||||||||||||| |||||||||| ||||||    
T  10233324 tgacaccgacaccaacacagacacatataattacactgaattatgtgattttctcaatttatta 10233261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 312 - 363
Target Start/End: Original strand, 12443460 - 12443511
Alignment:
Q  312 ccgacacgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||||| ||| ||  ||||||||||||||||| |||||||||||||||||    
T  12443460 ccgacacgtcacatacaattacactgaattatgtgattttctcaaattatta 12443511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 361
Target Start/End: Complemental strand, 44482283 - 44482240
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattat 361  Q
    |||||| ||| ||||||||||||||||| |||||||||||||||    
T  44482283 cgacacatataattacactgaattatgtgattttctcaaattat 44482240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 373100 - 373054
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||| |||||||| ||| ||| |||||||||||||||||||||||    
T  373100 cgacacatatgattaaactaaatcatgtcattttctcaaattattat 373054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 364
Target Start/End: Complemental strand, 19637821 - 19637775
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||| |||||||||| ||||| |||||||||||| ||||||||||    
T  19637821 cgacacatatgattacattgaataatgtcattttcttaaattattat 19637775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 363
Target Start/End: Complemental strand, 21038129 - 21038091
Alignment:
Q  325 tatgattacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||||||||||||||| ||||||| |||||||||    
T  21038129 tatgattacactgaattatgtaattttcttaaattatta 21038091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 330 - 368
Target Start/End: Complemental strand, 23440051 - 23440013
Alignment:
Q  330 ttacactgaattatgtcattttctcaaattattatacgt 368  Q
    ||||||| |||||| ||||||||||||||||||||||||    
T  23440051 ttacactaaattatatcattttctcaaattattatacgt 23440013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 361
Target Start/End: Complemental strand, 25361938 - 25361896
Alignment:
Q  319 gacacctatgattacactgaattatgtcattttctcaaattat 361  Q
    ||||| ||| ||||||||||||||||| |||||||||||||||    
T  25361938 gacacatataattacactgaattatgtgattttctcaaattat 25361896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Original strand, 26238129 - 26238163
Alignment:
Q  329 attacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||||||||||| |||||||||||||||||    
T  26238129 attacactgaattatgttattttctcaaattatta 26238163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 31015085 - 31015051
Alignment:
Q  329 attacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||||||||||| |||||||||||||||||    
T  31015085 attacactgaattatgtgattttctcaaattatta 31015051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 34298478 - 34298444
Alignment:
Q  329 attacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||||||||||| |||||||||||||||||    
T  34298478 attacactgaattatgtgattttctcaaattatta 34298444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 40181913 - 40181879
Alignment:
Q  329 attacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||||||||||| |||||||||||||||||    
T  40181913 attacactgaattatgtgattttctcaaattatta 40181879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 1486715 - 1486760
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| ||||||||||||||||| ||||| |||||||||||    
T  1486715 cgacacttataattacactgaattatgtgattttttcaaattatta 1486760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 361
Target Start/End: Original strand, 25098563 - 25098604
Alignment:
Q  320 acacctatgattacactgaattatgtcattttctcaaattat 361  Q
    |||| ||| ||||||||||||||||| |||||||||||||||    
T  25098563 acacatataattacactgaattatgtgattttctcaaattat 25098604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 310 - 359
Target Start/End: Original strand, 33313483 - 33313532
Alignment:
Q  310 caccgacacgacacctatgattacactgaattatgtcattttctcaaatt 359  Q
    ||||||||| |||| | |||||||| |||||||||| |||||||||||||    
T  33313483 caccgacactacacttctgattacaatgaattatgttattttctcaaatt 33313532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 38075976 - 38076021
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| |||||||||||||| |||||| |||| ||||||||||||    
T  38075976 cgacacatatgattacactgacttatgtgatttactcaaattatta 38076021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 40285660 - 40285705
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||||| ||||||||||||||  |||||||||||||||||    
T  40285660 cgacacatatgactacactgaattatgcgattttctcaaattatta 40285705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 44296501 - 44296545
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| |||||||| ||| ||||||||||||||||||||||||||    
T  44296501 cgacacatatgatta-actaaattatgtcattttctcaaattatta 44296545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 363
Target Start/End: Original strand, 2896140 - 2896172
Alignment:
Q  331 tacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||||||||| |||||||||||||||||    
T  2896140 tacactgaattatgtgattttctcaaattatta 2896172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 320 - 364
Target Start/End: Original strand, 7988459 - 7988503
Alignment:
Q  320 acacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||| |||||||||| |||||||||||| ||||| ||||||||||    
T  7988459 acacttatgattacattgaattatgtcactttcttaaattattat 7988503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 296 - 363
Target Start/End: Complemental strand, 9828119 - 9828052
Alignment:
Q  296 gtgtctgacactgacaccgacac-gacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||||| ||||| ||||| ||||| ||  ||||||||||||||||| ||||| |||||||||||    
T  9828119 gtgtctgacacggacac-gacaccgacacataaaattacactgaattatgtgattttatcaaattatta 9828052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 327 - 359
Target Start/End: Complemental strand, 14332452 - 14332420
Alignment:
Q  327 tgattacactgaattatgtcattttctcaaatt 359  Q
    |||||||| ||||||||||||||||||||||||    
T  14332452 tgattacattgaattatgtcattttctcaaatt 14332420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 312 - 352
Target Start/End: Original strand, 17705586 - 17705626
Alignment:
Q  312 ccgacacgacacctatgattacactgaattatgtcattttc 352  Q
    |||||||||||| ||| ||||||||||||||||| ||||||    
T  17705586 ccgacacgacacatataattacactgaattatgtgattttc 17705626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 329 - 361
Target Start/End: Complemental strand, 19324604 - 19324572
Alignment:
Q  329 attacactgaattatgtcattttctcaaattat 361  Q
    ||||||||||||||||| |||||||||||||||    
T  19324604 attacactgaattatgtgattttctcaaattat 19324572  T

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Target: chr1; HSP #46
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 319 - 363
Target Start/End: Original strand, 34712390 - 34712434
Alignment:
Q  319 gacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    ||||| ||| |||||||| |||||||| |||||||||||||||||    
T  34712390 gacacatataattacactaaattatgttattttctcaaattatta 34712434  T

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Target: scaffold0199 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 312 - 364
Target Start/End: Complemental strand, 2008 - 1956
Alignment:
Q  312 ccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||||||||||||||||| || |||||||||||| |||||||||||    
T  2008 ccgacacgacacctatgattacactaaaatatgtcattttcacaaattattat 1956  T

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Target: scaffold0007 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 308 - 364
Target Start/End: Original strand, 225264 - 225320
Alignment:
Q  308 gacaccgacacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    |||||| ||||||||| ||| |||||| || ||||||||||||||||||||||||||    
T  225264 gacaccaacacgacacttataattacattgtattatgtcattttctcaaattattat 225320  T

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Target: scaffold0049 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 319 - 361
Target Start/End: Complemental strand, 56974 - 56932
Alignment:
Q  319 gacacctatgattacactgaattatgtcattttctcaaattat 361  Q
    ||||| ||||||||||||||||||| |||||||||||||||||    
T  56974 gacacttatgattacactgaattatatcattttctcaaattat 56932  T

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Target: scaffold0085 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0085
Description:

Target: scaffold0085; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 319 - 364
Target Start/End: Complemental strand, 26050 - 26005
Alignment:
Q  319 gacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||||||||| |||||||| |||||||||||||| ||||||||    
T  26050 gacacctatgattgcactgaatcatgtcattttctcacattattat 26005  T

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Target: scaffold0044 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 362
Target Start/End: Complemental strand, 53233 - 53189
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatt 362  Q
    |||||| ||| ||||||||||||||||| ||||||||||||||||    
T  53233 cgacacttataattacactgaattatgtgattttctcaaattatt 53189  T

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Target: scaffold0008 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 296 - 363
Target Start/End: Original strand, 263356 - 263423
Alignment:
Q  296 gtgtctgacactgacaccgacac-gacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||||| ||||| ||||| ||||| ||| |||||||||||||||||  ||||||||||||||||    
T  263356 gtgtctgacaccgacac-gacactgacacttataattacactgaattatgtggttttctcaaattatta 263423  T

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Target: scaffold0011 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 318 - 365
Target Start/End: Original strand, 240027 - 240074
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattattata 365  Q
    |||||| |||||||||| |||||||| | |||||||||||||||||||    
T  240027 cgacacatatgattacattgaattatattattttctcaaattattata 240074  T

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Target: scaffold0004 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 329 - 363
Target Start/End: Complemental strand, 92849 - 92815
Alignment:
Q  329 attacactgaattatgtcattttctcaaattatta 363  Q
    ||||||||||||||||| |||||||||||||||||    
T  92849 attacactgaattatgtaattttctcaaattatta 92815  T

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Target: scaffold0571 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 327 - 364
Target Start/End: Complemental strand, 7734 - 7697
Alignment:
Q  327 tgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||| || |||||||||||||||||||||||||||||    
T  7734 tgattgcattgaattatgtcattttctcaaattattat 7697  T

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Target: scaffold0123 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 359
Target Start/End: Original strand, 44531 - 44572
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaatt 359  Q
    |||||| ||| ||||||||||||||||| |||||||||||||    
T  44531 cgacacatataattacactgaattatgtgattttctcaaatt 44572  T

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Target: scaffold0050 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Complemental strand, 70331 - 70286
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| ||||||||||||||||| ||||| |||||||||||    
T  70331 cgacacttataattacactgaattatgttattttttcaaattatta 70286  T

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Target: scaffold0036 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 9753 - 9798
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| |||||||||||||| || |||||||||||||||||    
T  9753 cgacacatataattacactgaattaagtgattttctcaaattatta 9798  T

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Target: scaffold0020 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 135318 - 135363
Alignment:
Q  318 cgacacctatgattacactgaattatgtcattttctcaaattatta 363  Q
    |||||| ||| ||||||| ||||||||| |||||||||||||||||    
T  135318 cgacacatataattacacagaattatgtgattttctcaaattatta 135363  T

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Target: scaffold0778 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0778
Description:

Target: scaffold0778; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 364
Target Start/End: Complemental strand, 4461 - 4413
Alignment:
Q  316 cacgacacctatgattacactgaattatgtcattttctcaaattattat 364  Q
    ||||||| ||||||| |||||||||||| |||| |||| ||||||||||    
T  4461 cacgacatctatgatgacactgaattatatcatattcttaaattattat 4413  T

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