View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15707_low_14 (Length: 316)
Name: NF15707_low_14
Description: NF15707
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15707_low_14 |
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Alignment Details
Target: chr7 (Bit Score: 289; Significance: 1e-162; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 289; E-Value: 1e-162
Query Start/End: Original strand, 1 - 301
Target Start/End: Original strand, 47592632 - 47592932
Alignment:
| Q |
1 |
acacataccacctttacaggaaagagaacaaaaactgctacaagaaaggctgctgctttacgtggatgcagttttatccctgaagaaaccataaagaaag |
100 |
Q |
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| T |
47592632 |
acacataccacctttacaggaaagagaacaaaaactgctacaagaaaggctgctgctttacgtggatgcagttttatccctgaagaaaccataaagaaag |
47592731 |
T |
|
| Q |
101 |
aagaaacacacaatgaagataatccggtaagctcagcctccacttcattgcatatgcctgcacaaaatgaatgtcagatgtggggtatgggatactaggg |
200 |
Q |
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| T |
47592732 |
aagaaacacacaatgaagataatccggtaagctcagcctccacttcattgcatatgcctgcacaaaatgaatggcagatgtggggtatgggatactaggg |
47592831 |
T |
|
| Q |
201 |
cttacgttgcatttttatttgtgattaggcttttgcgtgaacaattacgaacttgtttcatgtgattatgtgcatgcatgatcattatgttgttttagga |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
47592832 |
cttacgttgcatttttatttgtgattaggcttttgcgtgaacaattacgaacctgtttcatgtgattatgtgcatgcatgatcattatgttgttgtagga |
47592931 |
T |
|
| Q |
301 |
t |
301 |
Q |
| |
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| |
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| T |
47592932 |
t |
47592932 |
T |
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