View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF1570_low_12 (Length: 272)
Name: NF1570_low_12
Description: NF1570
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF1570_low_12 |
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Alignment Details
Target: chr5 (Bit Score: 178; Significance: 4e-96; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 29 - 222
Target Start/End: Complemental strand, 19301138 - 19300945
Alignment:
| Q |
29 |
agattatacttataagggtcgatttcctttggtgacagagtcttctgataacaattcagttgttgttgaagaaaaatcaccttctgttgataccaagttt |
128 |
Q |
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| T |
19301138 |
agattctacttataagggtcgttttcctttggtgacagaatcttctgataacaattcagttgttgttgaagaaaaatcaccttctgttgataccaagttt |
19301039 |
T |
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| Q |
129 |
gctgttatgaaccgtggtaagaacattgttggtgctaaaaacaatggttttgagcttgctgagaagaagctgaacaaagacgggaagatgaaat |
222 |
Q |
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| T |
19301038 |
gctgttatgaaccgtggtaagaacattgttggcgctaaaaacaatggttttgagcttgctgagaagaagctgaacaaagacgggaagatgaaat |
19300945 |
T |
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