View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15712_low_24 (Length: 307)
Name: NF15712_low_24
Description: NF15712
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15712_low_24 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 235 - 307
Target Start/End: Complemental strand, 43803144 - 43803071
Alignment:
| Q |
235 |
ttataaacaaaggaaacaaatagaaaa-gtgattctcattactcaattatggaaagtacaagatgtatatatac |
307 |
Q |
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| T |
43803144 |
ttatgaacaaaagaaacaaatagaaaaagtgattctcattactcaattatggaaagtacaagatgtatatatac |
43803071 |
T |
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