View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15712_low_33 (Length: 264)
Name: NF15712_low_33
Description: NF15712
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15712_low_33 |
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Alignment Details
Target: chr1 (Bit Score: 66; Significance: 3e-29; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 100 - 216
Target Start/End: Original strand, 3478423 - 3478540
Alignment:
| Q |
100 |
tattatatttgatgactattaaaagttctgaatattatttatgaatttggagnnnnnnnnctacgtaga-tttgactttaataatacaaaactaacatcc |
198 |
Q |
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| T |
3478423 |
tattatatttgatgactattaaaagttctgaatattatttagtaatttggagaaaaaaaactatttagattttgactttaataatacaaaattaacatcc |
3478522 |
T |
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| Q |
199 |
tttatacaaccaaacact |
216 |
Q |
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|||||||||||||||||| |
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| T |
3478523 |
tttatacaaccaaacact |
3478540 |
T |
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