View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15712_low_36 (Length: 255)

Name: NF15712_low_36
Description: NF15712
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15712_low_36
NF15712_low_36
[»] chr3 (69 HSPs)
chr3 (1-250)||(33235545-33235793)
chr3 (108-243)||(12914036-12914171)
chr3 (108-231)||(40272813-40272936)
chr3 (119-231)||(6411834-6411945)
chr3 (107-231)||(22609799-22609922)
chr3 (108-244)||(13628791-13628929)
chr3 (108-244)||(39203536-39203670)
chr3 (108-244)||(26869727-26869862)
chr3 (107-218)||(31904856-31904968)
chr3 (109-244)||(26573147-26573282)
chr3 (108-218)||(54484736-54484847)
chr3 (108-231)||(14986990-14987115)
chr3 (120-244)||(34420656-34420781)
chr3 (108-231)||(10795424-10795549)
chr3 (108-242)||(46421035-46421172)
chr3 (108-244)||(516429-516568)
chr3 (108-244)||(1217110-1217244)
chr3 (108-242)||(29366721-29366857)
chr3 (108-218)||(45786215-45786327)
chr3 (108-244)||(53996566-53996703)
chr3 (127-231)||(55401209-55401314)
chr3 (111-218)||(7943036-7943143)
chr3 (108-241)||(13730603-13730738)
chr3 (119-241)||(45948850-45948972)
chr3 (111-244)||(54374349-54374483)
chr3 (108-218)||(49013474-49013586)
chr3 (105-244)||(22122915-22123052)
chr3 (108-231)||(31592882-31593003)
chr3 (109-244)||(8247688-8247826)
chr3 (156-241)||(4495713-4495798)
chr3 (126-215)||(9276313-9276401)
chr3 (108-215)||(15797271-15797376)
chr3 (107-218)||(31672739-31672851)
chr3 (157-218)||(47624088-47624148)
chr3 (156-241)||(54032608-54032693)
chr3 (109-206)||(353351-353450)
chr3 (108-200)||(34771365-34771457)
chr3 (119-214)||(19731052-19731147)
chr3 (108-218)||(25517171-25517282)
chr3 (108-218)||(16735487-16735596)
chr3 (108-182)||(24578007-24578081)
chr3 (108-244)||(25944489-25944626)
chr3 (121-232)||(43114882-43114995)
chr3 (160-244)||(45620881-45620966)
chr3 (108-192)||(52926220-52926304)
chr3 (108-244)||(5173720-5173857)
chr3 (124-244)||(9607223-9607345)
chr3 (119-214)||(19751628-19751723)
chr3 (108-244)||(45139479-45139615)
chr3 (157-215)||(52428527-52428585)
chr3 (192-240)||(35417940-35417988)
chr3 (119-214)||(44403567-44403663)
chr3 (157-244)||(30928197-30928284)
chr3 (107-146)||(31922839-31922878)
chr3 (165-242)||(7696945-7697020)
chr3 (182-244)||(12525427-12525489)
chr3 (108-182)||(24577917-24577991)
chr3 (167-231)||(21875046-21875111)
chr3 (180-244)||(10870025-10870088)
chr3 (157-244)||(33926103-33926190)
chr3 (173-212)||(39212042-39212081)
chr3 (99-142)||(47624221-47624264)
chr3 (108-142)||(4495677-4495711)
chr3 (108-142)||(10484617-10484651)
chr3 (108-142)||(40390363-40390397)
chr3 (108-142)||(54032572-54032606)
chr3 (158-206)||(8410918-8410966)
chr3 (108-140)||(24851302-24851334)
chr3 (158-218)||(52952532-52952592)
[»] chr1 (70 HSPs)
chr1 (108-244)||(46247954-46248090)
chr1 (121-241)||(23768334-23768454)
chr1 (108-244)||(34725099-34725233)
chr1 (108-244)||(18944664-18944803)
chr1 (108-244)||(32632558-32632693)
chr1 (108-244)||(10668246-10668384)
chr1 (108-244)||(35005144-35005282)
chr1 (108-204)||(4349699-4349795)
chr1 (108-244)||(14617059-14617195)
chr1 (108-244)||(27474302-27474437)
chr1 (110-241)||(46991828-46991959)
chr1 (108-241)||(20004091-20004226)
chr1 (108-241)||(30395727-30395862)
chr1 (108-244)||(27201668-27201806)
chr1 (119-241)||(6925124-6925246)
chr1 (118-244)||(18724557-18724682)
chr1 (108-244)||(38478283-38478417)
chr1 (108-244)||(41319807-41319943)
chr1 (110-231)||(45402128-45402251)
chr1 (108-218)||(35253188-35253296)
chr1 (108-213)||(1517312-1517418)
chr1 (119-244)||(45264411-45264537)
chr1 (111-244)||(45812541-45812672)
chr1 (108-244)||(47214532-47214666)
chr1 (99-218)||(31382206-31382324)
chr1 (108-218)||(23796512-23796622)
chr1 (161-210)||(4430080-4430129)
chr1 (108-244)||(6983812-6983946)
chr1 (108-202)||(18741958-18742054)
chr1 (116-218)||(19701617-19701720)
chr1 (129-244)||(25468285-25468400)
chr1 (119-244)||(2435798-2435924)
chr1 (110-200)||(10378738-10378828)
chr1 (172-218)||(17470411-17470457)
chr1 (109-208)||(19932755-19932856)
chr1 (108-213)||(8197095-8197200)
chr1 (108-244)||(19414460-19414594)
chr1 (119-244)||(35019251-35019375)
chr1 (108-244)||(9939482-9939621)
chr1 (162-218)||(34679274-34679330)
chr1 (119-202)||(46859129-46859213)
chr1 (127-218)||(11596560-11596650)
chr1 (120-218)||(12126850-12126946)
chr1 (108-199)||(43768205-43768296)
chr1 (127-218)||(44485129-44485220)
chr1 (127-197)||(15505632-15505702)
chr1 (121-218)||(43207542-43207640)
chr1 (109-231)||(22324927-22325049)
chr1 (119-244)||(35117777-35117905)
chr1 (110-242)||(39214961-39215094)
chr1 (124-244)||(18335305-18335425)
chr1 (164-244)||(24564365-24564445)
chr1 (108-201)||(42304208-42304303)
chr1 (109-244)||(15511150-15511288)
chr1 (108-214)||(20999851-20999957)
chr1 (113-231)||(30682848-30682963)
chr1 (157-217)||(27136701-27136762)
chr1 (172-244)||(52910238-52910311)
chr1 (172-240)||(50760291-50760359)
chr1 (161-244)||(31272429-31272511)
chr1 (153-218)||(19656151-19656217)
chr1 (157-218)||(33223031-33223092)
chr1 (108-170)||(50606498-50606560)
chr1 (179-244)||(22327120-22327185)
chr1 (119-244)||(23371145-23371268)
chr1 (157-218)||(34149010-34149071)
chr1 (157-244)||(20036241-20036329)
chr1 (174-218)||(20169156-20169200)
chr1 (157-201)||(21910699-21910743)
chr1 (188-216)||(25290214-25290242)
[»] chr7 (57 HSPs)
chr7 (105-244)||(11617586-11617725)
chr7 (108-243)||(2541020-2541155)
chr7 (108-242)||(23419675-23419809)
chr7 (99-243)||(19426882-19427025)
chr7 (99-241)||(7879639-7879781)
chr7 (108-244)||(21172010-21172144)
chr7 (108-244)||(31591110-31591244)
chr7 (108-244)||(32758259-32758393)
chr7 (108-241)||(42798670-42798803)
chr7 (108-243)||(27629633-27629768)
chr7 (111-244)||(33871914-33872046)
chr7 (108-244)||(42391101-42391235)
chr7 (108-241)||(42805525-42805660)
chr7 (108-241)||(47716460-47716595)
chr7 (108-244)||(10693074-10693208)
chr7 (127-244)||(28362165-28362282)
chr7 (109-241)||(35334818-35334948)
chr7 (108-217)||(35787270-35787378)
chr7 (99-244)||(43557470-43557618)
chr7 (108-244)||(19265813-19265947)
chr7 (108-244)||(34626209-34626344)
chr7 (122-241)||(42101899-42102019)
chr7 (108-211)||(22698968-22699074)
chr7 (108-218)||(42476897-42477005)
chr7 (157-244)||(48123534-48123621)
chr7 (108-218)||(48735123-48735231)
chr7 (108-214)||(14099008-14099113)
chr7 (108-214)||(14409025-14409130)
chr7 (109-243)||(18512455-18512588)
chr7 (108-244)||(29907417-29907552)
chr7 (108-218)||(40463901-40464010)
chr7 (102-218)||(16341302-16341419)
chr7 (108-244)||(18747484-18747621)
chr7 (172-244)||(7644954-7645026)
chr7 (119-238)||(21566439-21566559)
chr7 (126-218)||(38604551-38604642)
chr7 (157-241)||(46354195-46354281)
chr7 (154-231)||(2662982-2663057)
chr7 (108-205)||(23618978-23619075)
chr7 (108-238)||(8148947-8149077)
chr7 (128-231)||(19266461-19266564)
chr7 (108-186)||(27889317-27889395)
chr7 (119-244)||(47077867-47077990)
chr7 (157-214)||(1408485-1408542)
chr7 (175-244)||(35203437-35203506)
chr7 (108-241)||(38262197-38262330)
chr7 (112-218)||(25198749-25198856)
chr7 (172-218)||(5180222-5180268)
chr7 (99-244)||(11741793-11741936)
chr7 (108-142)||(45018924-45018958)
chr7 (172-244)||(12473302-12473374)
chr7 (197-244)||(1524276-1524323)
chr7 (119-214)||(23231585-23231680)
chr7 (162-244)||(6736888-6736969)
chr7 (108-142)||(36602547-36602581)
chr7 (160-244)||(32233188-32233271)
chr7 (122-199)||(33500556-33500635)
[»] chr8 (52 HSPs)
chr8 (108-241)||(36720797-36720930)
chr8 (108-241)||(28817627-28817760)
chr8 (106-218)||(45071289-45071400)
chr8 (112-241)||(29521690-29521819)
chr8 (109-218)||(29877118-29877227)
chr8 (108-241)||(44530150-44530283)
chr8 (108-243)||(2626518-2626656)
chr8 (108-244)||(39460995-39461133)
chr8 (106-244)||(22598155-22598292)
chr8 (108-218)||(35261703-35261813)
chr8 (108-218)||(12625913-12626024)
chr8 (108-218)||(13160726-13160835)
chr8 (108-244)||(12670251-12670385)
chr8 (108-241)||(26954133-26954269)
chr8 (108-241)||(6760823-6760958)
chr8 (108-243)||(17823575-17823710)
chr8 (111-244)||(18164764-18164896)
chr8 (108-244)||(30454098-30454232)
chr8 (119-231)||(5689642-5689754)
chr8 (119-231)||(8483950-8484062)
chr8 (108-231)||(5135291-5135413)
chr8 (108-218)||(10857852-10857963)
chr8 (108-218)||(8897765-8897875)
chr8 (99-218)||(20869947-20870068)
chr8 (158-244)||(14018019-14018106)
chr8 (108-216)||(16225045-16225155)
chr8 (108-231)||(7136528-7136653)
chr8 (113-244)||(20284075-20284210)
chr8 (127-218)||(24365079-24365171)
chr8 (108-241)||(25250523-25250658)
chr8 (108-244)||(31457171-31457306)
chr8 (113-244)||(21070703-21070839)
chr8 (120-244)||(44781517-44781643)
chr8 (110-207)||(44742521-44742619)
chr8 (119-243)||(389642-389768)
chr8 (120-215)||(17250888-17250985)
chr8 (156-216)||(23286374-23286432)
chr8 (119-208)||(40604918-40605006)
chr8 (157-218)||(43942348-43942411)
chr8 (158-244)||(35105921-35106008)
chr8 (108-170)||(28407475-28407537)
chr8 (175-244)||(11748297-11748366)
chr8 (172-244)||(20869563-20869633)
chr8 (108-181)||(26102578-26102651)
chr8 (108-185)||(16013511-16013590)
chr8 (120-200)||(19729382-19729462)
chr8 (181-244)||(30962847-30962910)
chr8 (108-218)||(23000229-23000329)
chr8 (108-142)||(27468093-27468127)
chr8 (167-244)||(36918122-36918199)
chr8 (106-142)||(27508010-27508046)
chr8 (157-244)||(42083748-42083836)
[»] chr2 (54 HSPs)
chr2 (108-241)||(8455317-8455450)
chr2 (108-231)||(9671192-9671313)
chr2 (116-244)||(32781298-32781425)
chr2 (108-244)||(10543696-10543834)
chr2 (108-244)||(10546160-10546297)
chr2 (108-241)||(11514437-11514569)
chr2 (108-241)||(14444730-14444862)
chr2 (108-244)||(14530316-14530454)
chr2 (108-218)||(40762235-40762345)
chr2 (108-218)||(36871517-36871625)
chr2 (108-207)||(25632544-25632643)
chr2 (108-244)||(21779262-21779396)
chr2 (108-244)||(23397764-23397898)
chr2 (157-244)||(12023969-12024055)
chr2 (153-244)||(23145744-23145835)
chr2 (153-244)||(23557534-23557625)
chr2 (108-244)||(24200624-24200762)
chr2 (99-241)||(25249730-25249871)
chr2 (108-218)||(30826061-30826169)
chr2 (108-241)||(17668003-17668136)
chr2 (108-243)||(19977715-19977850)
chr2 (108-218)||(14544087-14544200)
chr2 (119-218)||(31158451-31158552)
chr2 (110-218)||(4516354-4516462)
chr2 (108-218)||(17896283-17896394)
chr2 (157-244)||(21377123-21377210)
chr2 (108-218)||(25079718-25079829)
chr2 (108-218)||(39914307-39914417)
chr2 (123-244)||(99281-99400)
chr2 (108-218)||(17623588-17623698)
chr2 (108-202)||(44643563-44643657)
chr2 (108-217)||(27573646-27573754)
chr2 (108-241)||(40416872-40417005)
chr2 (157-244)||(5450283-5450371)
chr2 (111-244)||(7214532-7214667)
chr2 (110-244)||(45235820-45235955)
chr2 (126-244)||(44521392-44521510)
chr2 (108-218)||(5841052-5841164)
chr2 (175-244)||(19614990-19615059)
chr2 (157-240)||(22371059-22371139)
chr2 (167-243)||(12315712-12315787)
chr2 (188-244)||(29419970-29420026)
chr2 (119-244)||(26684632-26684759)
chr2 (120-202)||(24890451-24890533)
chr2 (127-244)||(33795283-33795400)
chr2 (108-193)||(13245096-13245181)
chr2 (119-218)||(17471572-17471673)
chr2 (157-244)||(31821393-31821478)
chr2 (105-141)||(40579747-40579783)
chr2 (175-218)||(15296475-15296518)
chr2 (119-186)||(24860000-24860067)
chr2 (108-142)||(8575995-8576029)
chr2 (108-142)||(22371212-22371246)
chr2 (172-241)||(17705496-17705565)
[»] scaffold0049 (1 HSPs)
scaffold0049 (108-244)||(58975-59113)
[»] chr6 (37 HSPs)
chr6 (108-244)||(29355856-29355994)
chr6 (108-244)||(12221915-12222054)
chr6 (108-244)||(1354758-1354892)
chr6 (108-244)||(9161121-9161258)
chr6 (108-244)||(1346962-1347096)
chr6 (108-244)||(32728158-32728293)
chr6 (114-244)||(3815084-3815214)
chr6 (108-242)||(18277194-18277328)
chr6 (154-244)||(20400665-20400755)
chr6 (120-244)||(7947384-7947509)
chr6 (157-221)||(1941876-1941940)
chr6 (108-244)||(2166411-2166549)
chr6 (108-244)||(2178044-2178182)
chr6 (108-218)||(26097184-26097292)
chr6 (108-218)||(25557749-25557857)
chr6 (172-218)||(6024257-6024303)
chr6 (120-244)||(23240837-23240959)
chr6 (154-231)||(33138844-33138921)
chr6 (172-244)||(12889424-12889496)
chr6 (108-244)||(24097579-24097711)
chr6 (174-244)||(8409241-8409311)
chr6 (108-186)||(12885967-12886047)
chr6 (168-209)||(24751135-24751176)
chr6 (114-231)||(32579437-32579553)
chr6 (108-184)||(383761-383837)
chr6 (129-242)||(14553511-14553626)
chr6 (153-244)||(13905026-13905116)
chr6 (108-244)||(17432338-17432482)
chr6 (157-242)||(28007628-28007711)
chr6 (120-244)||(15866052-15866174)
chr6 (108-185)||(23930128-23930205)
chr6 (99-188)||(3116121-3116212)
chr6 (183-218)||(9671161-9671196)
chr6 (108-179)||(13267788-13267859)
chr6 (99-141)||(6808496-6808538)
chr6 (108-140)||(12892111-12892143)
chr6 (167-218)||(13628316-13628368)
[»] chr5 (44 HSPs)
chr5 (98-241)||(24448891-24449034)
chr5 (108-244)||(38879579-38879717)
chr5 (108-217)||(16880648-16880757)
chr5 (108-244)||(32703422-32703556)
chr5 (108-244)||(28516434-28516571)
chr5 (108-241)||(41014320-41014452)
chr5 (121-244)||(27328750-27328875)
chr5 (108-241)||(4619105-4619240)
chr5 (108-243)||(8169985-8170118)
chr5 (108-244)||(43334200-43334338)
chr5 (108-218)||(7097761-7097870)
chr5 (108-215)||(13801768-13801877)
chr5 (108-244)||(35710311-35710445)
chr5 (120-236)||(19142956-19143071)
chr5 (119-211)||(43574637-43574729)
chr5 (108-218)||(29334419-29334530)
chr5 (111-218)||(30006349-30006456)
chr5 (110-218)||(7368422-7368528)
chr5 (108-218)||(20135628-20135740)
chr5 (108-244)||(22187283-22187421)
chr5 (107-218)||(12006328-12006441)
chr5 (108-182)||(16957374-16957448)
chr5 (130-218)||(2838803-2838890)
chr5 (108-196)||(34154815-34154903)
chr5 (172-244)||(42924899-42924971)
chr5 (165-244)||(34074620-34074699)
chr5 (153-241)||(1405188-1405276)
chr5 (111-167)||(39801591-39801647)
chr5 (158-217)||(36770806-36770864)
chr5 (157-208)||(41425982-41426033)
chr5 (157-242)||(208977-209062)
chr5 (127-208)||(22600488-22600569)
chr5 (157-218)||(22907915-22907975)
chr5 (101-142)||(29184055-29184096)
chr5 (188-244)||(22025541-22025597)
chr5 (177-244)||(37024626-37024691)
chr5 (127-218)||(24323725-24323816)
chr5 (127-218)||(24360349-24360440)
chr5 (106-140)||(19438768-19438802)
chr5 (108-206)||(31694109-31694207)
chr5 (119-200)||(9794390-9794471)
chr5 (157-218)||(24903746-24903807)
chr5 (108-169)||(25622533-25622594)
chr5 (108-141)||(32354228-32354261)
[»] chr4 (73 HSPs)
chr4 (108-218)||(20639659-20639770)
chr4 (106-244)||(6430625-6430762)
chr4 (110-244)||(17043398-17043531)
chr4 (108-218)||(14983858-14983968)
chr4 (108-218)||(25629073-25629183)
chr4 (108-241)||(5648260-5648392)
chr4 (108-241)||(16408602-16408737)
chr4 (108-244)||(44363131-44363269)
chr4 (108-243)||(47443956-47444091)
chr4 (110-241)||(21646965-21647098)
chr4 (119-221)||(51865050-51865152)
chr4 (108-244)||(47528531-47528665)
chr4 (108-244)||(48598826-48598960)
chr4 (108-244)||(30639378-30639513)
chr4 (105-241)||(40915830-40915965)
chr4 (108-216)||(23501813-23501923)
chr4 (108-244)||(9832314-9832448)
chr4 (108-244)||(11054149-11054283)
chr4 (119-244)||(19027846-19027971)
chr4 (108-244)||(20224982-20225116)
chr4 (109-244)||(29207900-29208033)
chr4 (108-244)||(35567168-35567304)
chr4 (108-203)||(30690177-30690272)
chr4 (121-244)||(37494849-37494972)
chr4 (108-244)||(5306661-5306800)
chr4 (108-210)||(12711450-12711553)
chr4 (108-218)||(20405110-20405223)
chr4 (108-218)||(16911586-16911698)
chr4 (107-218)||(7909280-7909391)
chr4 (107-231)||(8473620-8473744)
chr4 (107-218)||(21489111-21489223)
chr4 (116-244)||(25463120-25463247)
chr4 (108-218)||(54175088-54175199)
chr4 (119-218)||(9987846-9987945)
chr4 (108-199)||(55766467-55766558)
chr4 (108-199)||(55830722-55830813)
chr4 (108-214)||(13256400-13256508)
chr4 (153-210)||(17079697-17079754)
chr4 (158-218)||(39029111-39029172)
chr4 (172-244)||(7038051-7038122)
chr4 (120-244)||(41018807-41018930)
chr4 (153-244)||(7385522-7385613)
chr4 (128-218)||(49796822-49796911)
chr4 (110-244)||(54967019-54967151)
chr4 (160-244)||(487187-487272)
chr4 (108-197)||(20225119-20225210)
chr4 (108-203)||(20908637-20908733)
chr4 (172-240)||(25343189-25343257)
chr4 (158-211)||(48327814-48327869)
chr4 (111-244)||(39077800-39077931)
chr4 (157-244)||(47441580-47441667)
chr4 (125-244)||(49938611-49938727)
chr4 (158-218)||(14590861-14590922)
chr4 (108-186)||(30352581-30352661)
chr4 (108-169)||(38755909-38755970)
chr4 (157-231)||(30581515-30581591)
chr4 (99-142)||(35532092-35532135)
chr4 (108-198)||(2813169-2813262)
chr4 (108-142)||(11394952-11394986)
chr4 (108-142)||(11404679-11404713)
chr4 (180-214)||(23580281-23580315)
chr4 (159-244)||(30496374-30496457)
chr4 (108-178)||(38786673-38786743)
chr4 (108-142)||(40553938-40553972)
chr4 (172-218)||(51420598-51420644)
chr4 (108-169)||(33836488-33836549)
chr4 (108-231)||(10277758-10277879)
chr4 (123-200)||(16494259-16494338)
chr4 (108-240)||(32478793-32478918)
chr4 (108-140)||(32484335-32484367)
chr4 (157-208)||(35894511-35894563)
chr4 (108-168)||(44718641-44718701)
chr4 (108-140)||(56323002-56323034)
[»] scaffold0057 (4 HSPs)
scaffold0057 (99-217)||(24764-24882)
scaffold0057 (108-218)||(46855-46965)
scaffold0057 (120-218)||(43683-43780)
scaffold0057 (110-170)||(46710-46770)
[»] scaffold0258 (1 HSPs)
scaffold0258 (108-244)||(13025-13160)
[»] scaffold0168 (1 HSPs)
scaffold0168 (108-244)||(30577-30711)
[»] scaffold0015 (1 HSPs)
scaffold0015 (108-231)||(48635-48756)
[»] scaffold0311 (1 HSPs)
scaffold0311 (120-218)||(10834-10932)
[»] scaffold0018 (1 HSPs)
scaffold0018 (108-211)||(72868-72971)
[»] scaffold0223 (1 HSPs)
scaffold0223 (108-244)||(11129-11263)
[»] scaffold0187 (2 HSPs)
scaffold0187 (109-244)||(10052-10185)
scaffold0187 (109-244)||(20380-20513)
[»] scaffold1176 (1 HSPs)
scaffold1176 (111-244)||(1591-1722)
[»] scaffold0036 (1 HSPs)
scaffold0036 (153-241)||(35063-35152)
[»] scaffold0167 (1 HSPs)
scaffold0167 (127-231)||(23610-23714)
[»] scaffold0180 (1 HSPs)
scaffold0180 (108-194)||(24134-24220)
[»] scaffold0028 (1 HSPs)
scaffold0028 (152-212)||(32960-33021)
[»] scaffold0005 (1 HSPs)
scaffold0005 (158-218)||(226456-226517)
[»] scaffold0254 (1 HSPs)
scaffold0254 (172-244)||(4155-4227)
[»] scaffold0954 (1 HSPs)
scaffold0954 (119-214)||(3572-3667)
[»] scaffold0194 (1 HSPs)
scaffold0194 (98-194)||(24696-24792)


Alignment Details
Target: chr3 (Bit Score: 195; Significance: 1e-106; HSPs: 69)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 1 - 250
Target Start/End: Complemental strand, 33235793 - 33235545
Alignment:
Q  1 tcaacatatccactcactgttactttctgctgcttcaagtccacgtccactttcttagctcctgttcaaatttcaaattaatttccaataaatgaactaa 100  Q
    ||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  33235793 tcaacatatccactcaccgttactttctgctgcttcaagtccacatccactttcttagctcctgttcaaatttcaa-ttaatttccaataaatgaactaa 33235695  T
Q  101 aaacaataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctg-ttt 199  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| ||||| | |||||||||||||||||||||||||| ||||||||||||| |||    
T  33235694 aaacaataagggcaacctggtgcactaaagcttccgcatacgtaaggtctgcg-aggggtcccaccatttagtgtattgtacacagtcttaccctgtttt 33235596  T
Q  200 tttacacaagaggctgtttacacgatttgaacttgtgacctttcatctcac 250  Q
    ||||||||||||||| |||||||||||||||||||||||||||||| ||||    
T  33235595 tttacacaagaggctctttacacgatttgaacttgtgacctttcatgtcac 33235545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 108 - 243
Target Start/End: Original strand, 12914036 - 12914171
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| |||||| | ||||||||||||| | | || ||| ||| ||||| |||||||| ||||||||||||| | ||||||||||||||||||||    
T  12914036 aagggcaacccggtgcattgaagctcccgcatatgcagggtctgggaaggggtctcaccatttggtgtattgtacgccgccttaccctgttttttacaca 12914135  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttc 243  Q
    ||||||||||| || || ||||||||||||||||||    
T  12914136 agaggctgtttccaggacttgaacttgtgacctttc 12914171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 40272813 - 40272936
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  40272813 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacaca 40272912  T
Q  208 agaggctgtttacacgatttgaac 231  Q
    ||||| ||||| || || ||||||    
T  40272913 agaggttgtttccaggacttgaac 40272936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 119 - 231
Target Start/End: Original strand, 6411834 - 6411945
Alignment:
Q  119 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    |||||||||||||||||||||||| |||| ||| ||| |||||||| ||||| ||||||||||||||| ||||||||| |||||||||||||||||||||    
T  6411834 ggtgcactaaagctcccgcatacgcaaggtctgggaaggggtcccatcatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgttt 6411932  T
Q  219 acacgatttgaac 231  Q
    ||| || ||||||    
T  6411933 acaagacttgaac 6411945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 107 - 231
Target Start/End: Complemental strand, 22609922 - 22609799
Alignment:
Q  107 taagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacac 206  Q
    ||||||||||| |||||||| ||||||||||||||| |||| | | ||| |||||||||||||| ||||||||||||||| |||||||||| ||||||||    
T  22609922 taagggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacac 22609824  T
Q  207 aagaggctgtttacacgatttgaac 231  Q
    |||||||||||| || || ||||||    
T  22609823 aagaggctgtttccaagacttgaac 22609799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 13628791 - 13628929
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||  | ||||||||||||||| |||||||||||| |||||    
T  13628791 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttcttaca 13628890  T
Q  206 caagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||||| || || ||||||  |||||||||||    
T  13628891 caagaggctgtttccaggacttgaacccgtgacctttca 13628929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 39203670 - 39203536
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| |||||||||||||||||||||| | |||| | | ||| |||||||||||||| ||||||||||||||  |||||||||  |||||||||    
T  39203670 aagggcaacccggtgcactaaagctcccgcatatgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg--ttttacaca 39203573  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||||||||  | || |||||| ||||||||||||    
T  39203572 agaggctgtttcaaggacttgaacctgtgacctttca 39203536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 26869862 - 26869727
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| ||||||| |||||||||||||||| | || | |  || |||||||||||||| ||||||||||||||| |||||||||| ||||||||     
T  26869862 aagggcaacccggtgcaccaaagctcccgcatacgcatggtccggcaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacc 26869764  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||| || || |||||| ||||||||||||    
T  26869763 agaggctgtttccaggacttgaacctgtgacctttca 26869727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 107 - 218
Target Start/End: Original strand, 31904856 - 31904968
Alignment:
Q  107 taagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaaggg-tcccaccatttagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||| ||||||||||||||||||||||| |||||||  ||| ||| ||| ||||||||||| ||||||||||||||||| ||||||||||||||||    
T  31904856 taagggcagcctggtgcactaaagctcccgcacacgtaagatctgggaagggggtcccaccatttggtgtattgtacgcagtcataccctgttttttaca 31904955  T
Q  206 caagaggctgttt 218  Q
     || |||||||||    
T  31904956 taataggctgttt 31904968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 109 - 244
Target Start/End: Complemental strand, 26573282 - 26573147
Alignment:
Q  109 agggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaa 208  Q
    |||||| |||||||||||||||||| |||||||| | || | | ||  ||||||||||| || ||||||||||||||| ||||||||||||||||||||     
T  26573282 agggcagcctggtgcactaaagctcacgcatacgcagggtccgggatggggtcccaccaattggtgtattgtacgcagccttaccctgttttttacacag 26573183  T
Q  209 gaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||||||| || || ||||||  |||||||||||    
T  26573182 gaggctgtttccaggacttgaacccgtgacctttca 26573147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 54484847 - 54484736
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctg-ttttttacac 206  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||| ||||||||||||||| |||||| || ||||||||||    
T  54484847 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgtttttttacac 54484748  T
Q  207 aagaggctgttt 218  Q
    ||||||||||||    
T  54484747 aagaggctgttt 54484736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 14987115 - 14986990
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    ||||| |||| |||||||||||||||||||||| | |||| | | ||| |||||||||||||  | ||||||||||||||| ||||||||||||||||||    
T  14987115 aagggaaacccggtgcactaaagctcccgcatatgcaaggtccgggaatgggtcccaccattattggtgtattgtacgcagccttaccctgttttttaca 14987016  T
Q  206 caagaggctgtttacacgatttgaac 231  Q
    ||||||||||||| || || ||||||    
T  14987015 caagaggctgtttccaggacttgaac 14986990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 120 - 244
Target Start/End: Original strand, 34420656 - 34420781
Alignment:
Q  120 gtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    |||||||||||||||| |||||| |||| | | ||| |||||||||||||| | ||||| |||||||| |||||||||||||||||||||||||||||||    
T  34420656 gtgcactaaagctcccacatacgcaaggtccgggaaggggtcccaccattttggtgtatggtacgcagccttaccctgttttttacacaagaggctgttt 34420755  T
Q  219 acacgatttgaacttgtgacctttca 244  Q
     || || ||||||  |||||||||||    
T  34420756 ccaggacttgaacccgtgacctttca 34420781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 10795424 - 10795549
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttaca 205  Q
    ||||||||||||||||||| ||||||||||||||| | || |   ||| ||||||||||||||   ||||||||||||||| |||||||||| |||||||    
T  10795424 aagggcaacctggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtcttttaca 10795523  T
Q  206 caagaggctgtttacacgatttgaac 231  Q
    ||||||||||||| || || ||||||    
T  10795524 caagaggctgtttccaggacttgaac 10795549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 108 - 242
Target Start/End: Original strand, 46421035 - 46421172
Alignment:
Q  108 aagggcaacctggtgcact-aaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttac 204  Q
    |||||||| | |||||||| |||||||||||||||| | || | | ||| |||||||||||||  | ||||||||||||||| |||||||||||||||||    
T  46421035 aagggcaaaccggtgcacttaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttac 46421134  T
Q  205 acaagaggctgtttacacgatttgaacttgtgaccttt 242  Q
    |||||||||||||| || || ||||||  |||||||||    
T  46421135 acaagaggctgtttccaggacttgaacccgtgaccttt 46421172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 516568 - 516429
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtg---tattgtacgcagtcttaccctgttttttac 204  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| ||||||| ||||||  ||   |||||| ||||| |||||||||||||||||    
T  516568 aagggcaacccggtgcactaaagctcccgcatacgcagggtcggggaaggggtcccgccattttttggtttattgtgcgcagccttaccctgttttttac 516469  T
Q  205 acaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||||||||||| || || ||||||  |||||||||||    
T  516468 acaagaggctgtttccaggacttgaacccgtgacctttca 516429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 1217244 - 1217110
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| ||||||| |||||| ||||||||||||||| |||||||||  |||||||||    
T  1217244 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccgccatttggtgtattgtacgcagccttaccctg--ttttacaca 1217147  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||| || || ||||||  |||||||||||    
T  1217146 agaggctgtttccaggacttgaacccgtgacctttca 1217110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 242
Target Start/End: Original strand, 29366721 - 29366857
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    ||||||||||  |||||||||||||||| |||||| | || | | ||| |||||||||||||  | ||||||||||||||| |||||||||||||||| |    
T  29366721 aagggcaacccagtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttata 29366820  T
Q  206 caagaggctgtttacacgatttgaacttgtgaccttt 242  Q
    ||||||||||||| || || ||||||  |||||||||    
T  29366821 caagaggctgtttccaggacttgaacccgtgaccttt 29366857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 218
Target Start/End: Original strand, 45786215 - 45786327
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||||| |||||||||||||||| |||| || | || | | ||| ||||||||||||||   ||||||||||||||| ||||||||||||||||||    
T  45786215 aagggcaacccggtgcactaaagctccagcattcgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttaca 45786314  T
Q  206 caagaggctgttt 218  Q
    |||||||||||||    
T  45786315 caagaggctgttt 45786327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 53996566 - 53996703
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacac 206  Q
    ||||||| || ||||||||||||||||| |||||| |  | | | ||| |||||||||||||| | ||||||||| |||| |||||||||||||||||||    
T  53996566 aagggcagcccggtgcactaaagctcccacatacgcagtgtcagggaaggggtcccaccattttggtgtattgtaagcagccttaccctgttttttacac 53996665  T
Q  207 aagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||| ||||| ||||| ||||||  |||||||||||    
T  53996666 aagaggttgtttccacgacttgaacacgtgacctttca 53996703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 127 - 231
Target Start/End: Complemental strand, 55401314 - 55401209
Alignment:
Q  127 aaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgat 225  Q
    |||||||||||||||| |||| | | ||| |||||||||||||| | |||||| |||||||||||| ||||||||||||||||||||||||||||| ||     
T  55401314 aaagctcccgcatacggaaggtccgagaaggggtcccaccattttggtgtattatacgcagtcttaacctgttttttacacaagaggctgtttacaggac 55401215  T
Q  226 ttgaac 231  Q
    ||||||    
T  55401214 ttgaac 55401209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 7943143 - 7943036
Alignment:
Q  111 ggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaaggg-tcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaag 209  Q
    |||||||  ||||||||||||||||||||||| | || ||| ||||||| |||||||||||  ||||||||||||||||||||||||||||||| |||||    
T  7943143 ggcaacccagtgcactaaagctcccgcatacgcatggtctg-gaaagggatcccaccatttgatgtattgtacgcagtcttaccctgttttttagacaag 7943045  T
Q  210 aggctgttt 218  Q
    | |||||||    
T  7943044 atgctgttt 7943036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 108 - 241
Target Start/End: Original strand, 13730603 - 13730738
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||||| |||||||||||||||||||||| |   || | | ||| |||||||||||||  | ||||||||||| ||| ||||||||||||||||||    
T  13730603 aagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttttaca 13730702  T
Q  206 caagaggctgtttacacgatttgaacttgtgacctt 241  Q
    ||||||||||||| || || ||||||  ||||||||    
T  13730703 caagaggctgtttccaggacttgaacccgtgacctt 13730738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 241
Target Start/End: Original strand, 45948850 - 45948972
Alignment:
Q  119 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    |||||||||||||||||||||||| | || | | ||| ||||||||||| || |||||||||| |||| |||||||| |||||||||||||||| |||||    
T  45948850 ggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccaattggtgtattgtatgcagccttaccctattttttacacaagaggttgttt 45948949  T
Q  219 acacgatttgaacttgtgacctt 241  Q
     || || ||||||  ||||||||    
T  45948950 ccaggaattgaacccgtgacctt 45948972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 111 - 244
Target Start/End: Original strand, 54374349 - 54374483
Alignment:
Q  111 ggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaag 209  Q
    |||| ||||||| ||||||||||||||||| | | || | | ||| |||||||||||||| | || ||||||||||| |||||||| |||||||||||||    
T  54374349 ggcagcctggtgaactaaagctcccgcatatgcagggtccgggaaggggtcccaccattttggtggattgtacgcagccttaccctattttttacacaag 54374448  T
Q  210 aggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||| ||||| || || |||||| ||||||||||||    
T  54374449 aggttgtttccaagacttgaacctgtgacctttca 54374483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 218
Target Start/End: Original strand, 49013474 - 49013586
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||||| ||||||||||||||||||| || |   || | | ||| |||||||||||||  | ||||||||||||||| ||||||||||||||||||    
T  49013474 aagggcaacccggtgcactaaagctcccgcgtatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttaca 49013573  T
Q  206 caagaggctgttt 218  Q
    |||||||||||||    
T  49013574 caagaggctgttt 49013586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 105 - 244
Target Start/End: Original strand, 22122915 - 22123052
Alignment:
Q  105 aataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttac 204  Q
    ||||||||||||| ||||||||| ||||| |||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  ||||||    
T  22122915 aataagggcaacccggtgcactagagctctcgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttac 22123012  T
Q  205 acaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||| |||||| || || ||||||  | |||||||||    
T  22123013 acaagagactgtttccaggacttgaacccgcgacctttca 22123052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 31593003 - 31592882
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| | |||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  31593003 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggagtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 31592906  T
Q  208 agaggctgtttacacgatttgaac 231  Q
    ||||||||||| || || ||||||    
T  31592905 agaggctgtttccaggacttgaac 31592882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 109 - 244
Target Start/End: Original strand, 8247688 - 8247826
Alignment:
Q  109 agggcaacctggtgcact-aaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||||  ||||||| |||||||||||||||| | || | | ||| | |||||||||||  | ||||||||||||||  ||||||||||||||||||    
T  8247688 agggcaacccagtgcacttaaagctcccgcatacgcagggtccgggaaggagtcccaccattattggtgtattgtacgcaaccttaccctgttttttaca 8247787  T
Q  206 caagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||||| || || ||||||  |||||||||||    
T  8247788 caagaggctgtttccaggacttgaacccgtgacctttca 8247826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 4495713 - 4495798
Alignment:
Q  156 agggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctt 241  Q
    ||||||||||||||| ||||||||||||||| ||||||||||||||||||||| ||||| ||| || || ||||||  ||||||||    
T  4495713 agggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaataggctattttcaggacttgaacccgtgacctt 4495798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 126 - 215
Target Start/End: Complemental strand, 9276401 - 9276313
Alignment:
Q  126 taaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctg 215  Q
    ||||| ||||||||||| | || | | |||||||||| ||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  9276401 taaagttcccgcatacgcagggtccgggaaagggtcc-accatttggtgtattgtacgcagccttaccctgttttttacacaagaggctg 9276313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 215
Target Start/End: Complemental strand, 15797376 - 15797271
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| ||||||||| ||||||| |||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  15797376 aagggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 15797279  T
Q  208 agaggctg 215  Q
    ||||||||    
T  15797278 agaggctg 15797271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 107 - 218
Target Start/End: Complemental strand, 31672851 - 31672739
Alignment:
Q  107 taagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaa-agggtcccaccatttagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    ||||| || ||||||||||||||||||||||| |||||||   || ||| || |||||||||||| |||||||||||||| |||| || |||||||||||    
T  31672851 taaggacagcctggtgcactaaagctcccgcacacgtaagatatgggaagagagtcccaccatttggtgtattgtacgcactcttgccttgttttttaca 31672752  T
Q  206 caagaggctgttt 218  Q
     || |||||||||    
T  31672751 taataggctgttt 31672739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 157 - 218
Target Start/End: Complemental strand, 47624148 - 47624088
Alignment:
Q  157 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    |||||||||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  47624148 gggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgttt 47624088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 156 - 241
Target Start/End: Original strand, 54032608 - 54032693
Alignment:
Q  156 agggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctt 241  Q
    ||||||||||||||  |||||||||| |||| ||||||||||||||||||||||||| ||||| || || ||||||  ||||||||    
T  54032608 agggtcccaccattcggtgtattgtatgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgacctt 54032693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 109 - 206
Target Start/End: Original strand, 353351 - 353450
Alignment:
Q  109 agggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttacac 206  Q
    ||||||||| |||||||||||||||||||||| |   || | | ||| |||||||||||||  | ||||||||||||||| |||||||||||||||||||    
T  353351 agggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacac 353450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 200
Target Start/End: Original strand, 34771365 - 34771457
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtttt 200  Q
    ||||||| || ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||||||    
T  34771365 aagggcagcccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 34771457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 119 - 214
Target Start/End: Complemental strand, 19731147 - 19731052
Alignment:
Q  119 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggct 214  Q
    |||||||||||||||| ||||||  |  | ||| ||||||||||||||| |  ||||||||||||||  |||||| ||||||||||||||||||||    
T  19731147 ggtgcactaaagctcctgcatacacagagtctgggaaagggtcccaccaataggtgtattgtacgcaaccttaccttgttttttacacaagaggct 19731052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 218
Target Start/End: Original strand, 25517171 - 25517282
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctg-ttttttacac 206  Q
    |||||||||| |||||||||||||||| ||||||| | |  | | ||| |||||||||||||| ||||||||||||||| | || | || ||||||||||    
T  25517171 aagggcaacccggtgcactaaagctccagcatacgcaggatccgggaaggggtcccaccattttgtgtattgtacgcagccatatcttgtttttttacac 25517270  T
Q  207 aagaggctgttt 218  Q
    |||||| |||||    
T  25517271 aagaggatgttt 25517282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 16735596 - 16735487
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    ||||||||||  ||||||| ||||| ||||||||| |  | | | ||| |||||||||||||| ||||||||||||||| |||||||||| ||||  |||    
T  16735596 aagggcaacccagtgcactgaagctaccgcatacgcagtgtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttctaca 16735498  T
Q  208 agaggctgttt 218  Q
    |||||||||||    
T  16735497 agaggctgttt 16735487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 24578081 - 24578007
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtac 182  Q
    |||||||||| ||||||||| || ||||||||| ||| || ||| ||||| ||||||||||||||||||||||||    
T  24578081 aagggcaacccggtgcactagagttcccgcatatgtagggtctgggaaagagtcccaccatttagtgtattgtac 24578007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 25944626 - 25944489
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca-tttagtgtattgtacgcagtcttaccctgttttttacac 206  Q
    ||||||| |||||||| ||||||||||| |||||| | || | | ||| ||||||||||| ||| ||||||||||| ||| ||| ||| |||||||||||    
T  25944626 aagggcagcctggtgcgctaaagctcccacatacgcagggtcagggaaggggtcccaccattttggtgtattgtactcagccttgcccagttttttacac 25944527  T
Q  207 aagaggctgtttacacgatttgaacttgtgacctttca 244  Q
     |||||| |||| || || ||||||   ||||||||||    
T  25944526 gagaggcggtttccaggacttgaacccatgacctttca 25944489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 121 - 232
Target Start/End: Original strand, 43114882 - 43114995
Alignment:
Q  121 tgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtc-ttaccctgtttt-ttacacaagaggctgttt 218  Q
    |||||||||||||||||||||| | |||    | |||||||||||||||| |||||||||| | || | |||||||||||| ||||||||||||||||||    
T  43114882 tgcactaaagctcccgcatacgcaggggtccaggaagggtcccaccatttggtgtattgtaggtagcccttaccctgtttttttacacaagaggctgttt 43114981  T
Q  219 acacgatttgaact 232  Q
     || || |||||||    
T  43114982 ccaggacttgaact 43114995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 160 - 244
Target Start/End: Original strand, 45620881 - 45620966
Alignment:
Q  160 tcccaccatttagtgtattgtacgcagtcttaccctg-ttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||||| || ||||||||||||||| ||||||||| |||||||||||||||||||||| ||  | ||||||  |||||||||||    
T  45620881 tcccaccaattggtgtattgtacgcagccttaccctgtttttttacacaagaggctgtttccagaacttgaacccgtgacctttca 45620966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 192
Target Start/End: Original strand, 52926220 - 52926304
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttac 192  Q
    |||||||||| ||||| |||||||||||||||||| | || | | ||| | |||||||||||| ||||||||||||||| |||||    
T  52926220 aagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaaggtgtcccaccatttggtgtattgtacgcagccttac 52926304  T

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Target: chr3; HSP #46
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 5173720 - 5173857
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca--tttagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||||| |||||||||||||||||||||||| |||| | | ||| ||| |||||||  ||| |||||||| | |||  |||||  || ||||||||    
T  5173720 aagggcaacccggtgcactaaagctcccgcatacgcaaggtccgggaaggggccccaccatttttggtgtattgcatgcaaccttactttg-tttttaca 5173818  T
Q  206 caagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||| ||||| || || ||||||  |||||||||||    
T  5173819 caagaggttgtttccaggacttgaacccgtgacctttca 5173857  T

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Target: chr3; HSP #47
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 124 - 244
Target Start/End: Complemental strand, 9607345 - 9607223
Alignment:
Q  124 actaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttaca 221  Q
    ||||||||||||||||| |   || ||| ||| |||||||| ||||  | ||||||| ||||||| ||||||||||||||||| ||||||||||||| ||    
T  9607345 actaaagctcccgcatatgcggggtctgggaaggggtcccaacattattggtgtattctacgcagccttaccctgttttttacgcaagaggctgtttcca 9607246  T
Q  222 cgatttgaacttgtgacctttca 244  Q
     || ||||||   ||||||||||    
T  9607245 ggacttgaaccgatgacctttca 9607223  T

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Target: chr3; HSP #48
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 119 - 214
Target Start/End: Complemental strand, 19751723 - 19751628
Alignment:
Q  119 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggct 214  Q
    |||||||||||||||  ||||||  || | ||| ||||||||||||||| |  ||||||||||||||  |||||| || |||||||||||||||||    
T  19751723 ggtgcactaaagctcatgcatacacaaagtctgggaaagggtcccaccaataggtgtattgtacgcaaccttaccttgatttttacacaagaggct 19751628  T

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Target: chr3; HSP #49
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 45139479 - 45139615
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttaca 205  Q
    ||||||| || ||||||| |||| ||||||||||| | || ||| ||| ||||||||||||||   |||||||||| |||| |||||||||| |||||||    
T  45139479 aagggcagcccggtgcac-aaagttcccgcatacgca-ggtctgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgtgttttaca 45139576  T
Q  206 caagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||| ||||| ||  | ||||||  |||||||||||    
T  45139577 caagaggttgtttccaaaacttgaacccgtgacctttca 45139615  T

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Target: chr3; HSP #50
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 52428527 - 52428585
Alignment:
Q  157 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctg 215  Q
    |||| |||| |||| ||||||||||||||| |||||||||| |||||||||||||||||    
T  52428527 gggttccactatttggtgtattgtacgcagccttaccctgtattttacacaagaggctg 52428585  T

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Target: chr3; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 240
Target Start/End: Complemental strand, 35417988 - 35417940
Alignment:
Q  192 ccctgttttttacacaagaggctgtttacacgatttgaacttgtgacct 240  Q
    ||||||||||||||||||||||||||| || |||||||||| |||||||    
T  35417988 ccctgttttttacacaagaggctgtttccaggatttgaactcgtgacct 35417940  T

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Target: chr3; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 119 - 214
Target Start/End: Original strand, 44403567 - 44403663
Alignment:
Q  119 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagt-gtattgtacgcagtcttaccctgttttttacacaagaggct 214  Q
    |||||||||||||| | ||||||||| || | | ||| |||||||||||||| || ||||| | ||||| |||||| ||| ||||||||||||||||    
T  44403567 ggtgcactaaagcttcagcatacgtagggtccgggaaggggtcccaccattttgtggtattctccgcagccttaccttgtcttttacacaagaggct 44403663  T

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Target: chr3; HSP #53
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 30928197 - 30928284
Alignment:
Q  157 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||| ||| || ||||||| ||| ||  |||||| |||||||||||||||||||||||| || || ||||||  |||||||||||    
T  30928197 gggtcccgccaattggtgtattttacacaaccttaccttgttttttacacaagaggctgtttccaggacttgaacccgtgacctttca 30928284  T

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Target: chr3; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 107 - 146
Target Start/End: Original strand, 31922839 - 31922878
Alignment:
Q  107 taagggcaacctggtgcactaaagctcccgcatacgtaag 146  Q
    |||||||| |||||||||||||||||||||||||||||||    
T  31922839 taagggcagcctggtgcactaaagctcccgcatacgtaag 31922878  T

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Target: chr3; HSP #55
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 242
Target Start/End: Original strand, 7696945 - 7697020
Alignment:
Q  165 ccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgaccttt 242  Q
    |||||| ||||||||||||||| |||||||||  ||||||||||||| |||||| || || ||||||  |||||||||    
T  7696945 ccatttggtgtattgtacgcagccttaccctg--ttttacacaagagactgtttccaggacttgaacccgtgaccttt 7697020  T

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Target: chr3; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 244
Target Start/End: Complemental strand, 12525489 - 12525427
Alignment:
Q  182 cgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||| ||||||||| ||||||||||||||||||||| || || | |||| ||||||||||||    
T  12525489 cgcagccttaccctgatttttacacaagaggctgtttccaggactcgaacctgtgacctttca 12525427  T

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Target: chr3; HSP #57
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 24577991 - 24577917
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtac 182  Q
    |||||||| | ||||||||| |||||||| ||| | | || ||| |||||| |||||||||||||||||||||||    
T  24577991 aagggcaatccggtgcactagagctcccgtatatgcagggtctgggaaaggatcccaccatttagtgtattgtac 24577917  T

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Target: chr3; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 167 - 231
Target Start/End: Complemental strand, 21875111 - 21875046
Alignment:
Q  167 atttagtgtattgtacgcagtcttaccctgtttttt-acacaagaggctgtttacacgatttgaac 231  Q
    |||||||||||||||||||| |||||||| |||||| |||||||||| ||||| ||  ||||||||    
T  21875111 atttagtgtattgtacgcagccttaccctcttttttaacacaagaggttgtttccagaatttgaac 21875046  T

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Target: chr3; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 180 - 244
Target Start/End: Original strand, 10870025 - 10870088
Alignment:
Q  180 tacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||| ||||||||||||| ||||||||||||||||| || || ||||||  |||||||||||    
T  10870025 tacgcagccttaccctgtttt-tacacaagaggctgtttccaggacttgaacccgtgacctttca 10870088  T

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Target: chr3; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 33926190 - 33926103
Alignment:
Q  157 gggtcccaccatt-tagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||||| | ||||||||||| ||| |||||||||| |||||||||||||||| ||| || || ||||||   ||||||||||    
T  33926190 gggtcccaccattatggtgtattgtacacagccttaccctgt-ttttacacaagaggctatttccaggacttgaacccatgacctttca 33926103  T

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Target: chr3; HSP #61
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 173 - 212
Target Start/End: Complemental strand, 39212081 - 39212042
Alignment:
Q  173 tgtattgtacgcagtcttaccctgttttttacacaagagg 212  Q
    ||||||||||||||||||||| |||| |||||||||||||    
T  39212081 tgtattgtacgcagtcttaccttgttatttacacaagagg 39212042  T

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Target: chr3; HSP #62
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 142
Target Start/End: Complemental strand, 47624264 - 47624221
Alignment:
Q  99 aaaaacaataagggcaacctggtgcactaaagctcccgcatacg 142  Q
    ||||| || |||||||||| ||||||||||||||||||||||||    
T  47624264 aaaaaaaaaaagggcaacccggtgcactaaagctcccgcatacg 47624221  T

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Target: chr3; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 142
Target Start/End: Original strand, 4495677 - 4495711
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacg 142  Q
    |||||||||| ||||||||||||||||||||||||    
T  4495677 aagggcaacccggtgcactaaagctcccgcatacg 4495711  T

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Target: chr3; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 142
Target Start/End: Original strand, 10484617 - 10484651
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacg 142  Q
    |||||||||| ||||||||||||||||||||||||    
T  10484617 aagggcaacccggtgcactaaagctcccgcatacg 10484651  T

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Target: chr3; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 142
Target Start/End: Complemental strand, 40390397 - 40390363
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacg 142  Q
    |||||||||| ||||||||||||||||||||||||    
T  40390397 aagggcaacccggtgcactaaagctcccgcatacg 40390363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 142
Target Start/End: Original strand, 54032572 - 54032606
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacg 142  Q
    |||||||||| ||||||||||||||||||||||||    
T  54032572 aagggcaacccggtgcactaaagctcccgcatacg 54032606  T

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Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 206
Target Start/End: Original strand, 8410918 - 8410966
Alignment:
Q  158 ggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacac 206  Q
    |||||||||| || |||||||||  |||| |||||||||||||||||||    
T  8410918 ggtcccaccagttggtgtattgtgagcagccttaccctgttttttacac 8410966  T

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Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 140
Target Start/End: Original strand, 24851302 - 24851334
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcata 140  Q
    |||||||||| ||||||||||||||||||||||    
T  24851302 aagggcaacccggtgcactaaagctcccgcata 24851334  T

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Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 52952592 - 52952532
Alignment:
Q  158 ggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    |||||||| |||| ||||||||||| |||||||| | | ||||||||| |||||| |||||    
T  52952592 ggtcccactatttggtgtattgtacacagtcttatcatattttttacataagaggttgttt 52952532  T

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Target: chr1 (Bit Score: 77; Significance: 8e-36; HSPs: 70)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 8e-36
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 46247954 - 46248090
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| ||| |||||||||||||||||||| | || | | ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  46247954 aagggcaacccggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacaca 46248053  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||| || || ||||||  ||||| |||||    
T  46248054 agaggctgtttccaagacttgaacccgtgacatttca 46248090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 121 - 241
Target Start/End: Original strand, 23768334 - 23768454
Alignment:
Q  121 tgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttac 220  Q
    |||||||||||||||||||||| | || ||| ||| | |||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||| |    
T  23768334 tgcactaaagctcccgcatacgcagggtctgggaaggtgtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaagaggctgtttcc 23768433  T
Q  221 acgatttgaacttgtgacctt 241  Q
    | || |||||| |||||||||    
T  23768434 atgacttgaacctgtgacctt 23768454  T

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Target: chr1; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 34725099 - 34725233
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||||||||||||||||||| |||||||||  |||||||||    
T  34725099 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttagtgtattgtacgcagccttaccctg--ttttacaca 34725196  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||| || || ||||||  |||||||||||    
T  34725197 agaggctgtttccaggacttgaacccgtgacctttca 34725233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 18944803 - 18944664
Alignment:
Q  108 aagggcaacctggtgcactaaa-gctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttac 204  Q
    |||||||||| ||||||||||| ||||||||||||| | || | | ||| |||||||||||||  | ||||||||||||||| |||||||||||||||||    
T  18944803 aagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattgttggtgtattgtacgcagccttaccctgttttttac 18944704  T
Q  205 acaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||||||||||| || |  |||||| ||||||||||||    
T  18944703 acaagaggctgtttccaggccttgaacctgtgacctttca 18944664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 32632558 - 32632693
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    ||||| ||||||||||||| ||||||||||||| | | ||  || ||| |||||||||||||| ||||||||||||||| ||||||||| ||||||||||    
T  32632558 aagggaaacctggtgcactcaagctcccgcatatgcagggtttgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacaca 32632656  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||| || || ||||||  |||||||||||    
T  32632657 agaggctgtttccaggacttgaacccgtgacctttca 32632693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 10668384 - 10668246
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||  | ||||||||||||||  |||||| |||||||||||    
T  10668384 aagggcaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccttgttttttaca 10668285  T
Q  206 caagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||||| || || ||||||  |||||||||||    
T  10668284 caagaggctgtttccaggacttgaacccgtgacctttca 10668246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 35005282 - 35005144
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||||| ||||||||||||| |||||||||| | || | | ||| ||||||||||||||   |||||||||| |||| ||||||||||||||||||    
T  35005282 aagggcaacccggtgcactaaagcgcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtatgcagccttaccctgttttttaca 35005183  T
Q  206 caagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||||| || || ||||||  |||||||||||    
T  35005182 caagaggctgttttcaagacttgaacccgtgacctttca 35005144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 108 - 204
Target Start/End: Complemental strand, 4349795 - 4349699
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttac 204  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||| ||||||||||||||| |||||||||||||||||    
T  4349795 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttac 4349699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 14617195 - 14617059
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    ||||| |||| |||||||||||||||||||||| | | || | | ||| || ||||||||||| ||||||||||||||  |||||| |||| ||||||||    
T  14617195 aagggtaacccggtgcactaaagctcccgcatatgcagggtccgggaagggatcccaccatttggtgtattgtacgcaaccttaccttgttatttacaca 14617096  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||| || || ||||||| |||||||||||    
T  14617095 agaggctgtttccaggacttgaactcgtgacctttca 14617059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 27474437 - 27474302
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||| | |||||||||||||||||||||||| | || | | ||| ||||||||||||| ||||||||||||||||  || ||||| ||||||||||    
T  27474437 aagggcaatccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattcagtgtattgtacgcagctttgccctg-tttttacaca 27474339  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||| |||||| || || |||||| ||||||||||||    
T  27474338 agagactgtttccaagacttgaacctgtgacctttca 27474302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 110 - 241
Target Start/End: Complemental strand, 46991959 - 46991828
Alignment:
Q  110 gggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaag 209  Q
    |||||||| ||||||||||||||||| |||||| | || | | ||| |||||||||||||  ||||||||||| ||| ||||||||||||||||||||||    
T  46991959 gggcaacccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattcggtgtattgtacacagccttaccctgttttttacacaag 46991860  T
Q  210 aggctgtttacacgatttgaacttgtgacctt 241  Q
    ||| ||||| || || ||||||  ||||||||    
T  46991859 aggttgtttccaggacttgaacccgtgacctt 46991828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 108 - 241
Target Start/End: Original strand, 20004091 - 20004226
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||||| |||||||||||||||||||||| |   || ||| ||| |||||||||||||  | ||||||||||||||| |||||| |||||||||||    
T  20004091 aagggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgttttttaca 20004190  T
Q  206 caagaggctgtttacacgatttgaacttgtgacctt 241  Q
    | ||||||||||| || || ||||||  ||||||||    
T  20004191 cgagaggctgtttccaggacttgaacccgtgacctt 20004226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 108 - 241
Target Start/End: Original strand, 30395727 - 30395862
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||||  |||||||||||||||||||||| |   || | | ||| |||||||||||||  | ||||||||||||||| ||||||||||||||||||    
T  30395727 aagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttaca 30395826  T
Q  206 caagaggctgtttacacgatttgaacttgtgacctt 241  Q
    ||||||||||||| || || ||||||  ||||||||    
T  30395827 caagaggctgtttccaggacttgaacccgtgacctt 30395862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 27201806 - 27201668
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttaca 205  Q
    ||||||||||   |||||||||||||||||||||| |||| | | ||| ||||||||||||||   ||||||||||||||| |||||||||||| | |||    
T  27201806 aagggcaacccaatgcactaaagctcccgcatacgcaaggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttctgaca 27201707  T
Q  206 caagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||||| || || ||||||   ||||||||||    
T  27201706 caagaggctgtttccaggacttgaacccatgacctttca 27201668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 119 - 241
Target Start/End: Complemental strand, 6925246 - 6925124
Alignment:
Q  119 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    |||||||||||||||||||||||| | || | | ||| |||||||||||||  ||||||||| ||||| |||||||| |||||||||||||||||| |||    
T  6925246 ggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccattcggtgtattgtccgcagccttaccctattttttacacaagaggctattt 6925147  T
Q  219 acacgatttgaacttgtgacctt 241  Q
     || || ||||||  ||||||||    
T  6925146 ccaggacttgaacccgtgacctt 6925124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 118 - 244
Target Start/End: Original strand, 18724557 - 18724682
Alignment:
Q  118 tggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtt 217  Q
    |||||||| |||||||||||||| ||| || | | ||| ||||||||  |||| ||||||||||| ||| ||||||||||||||||||||||||||||||    
T  18724557 tggtgcac-aaagctcccgcatatgtagggtccgggaaggggtcccaagatttggtgtattgtacacagccttaccctgttttttacacaagaggctgtt 18724655  T
Q  218 tacacgatttgaacttgtgacctttca 244  Q
    | || || ||||||  |||||||||||    
T  18724656 tccaggacttgaacccgtgacctttca 18724682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 38478283 - 38478417
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||| ||||||||| ||||||||||||||| |||||||||  |||||||||    
T  38478283 aagggcaacccggtgcactagagctcccgcatatgcagggtccgagaaggggttccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 38478380  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||||||||  | || ||||||  |||||||||||    
T  38478381 agaggctgtttctaggacttgaacccgtgacctttca 38478417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 41319807 - 41319943
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggct-gcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacac 206  Q
    ||||||||||  ||||||| || |||||||||| | ||||| | | ||| |||||||| ||||| ||||||||||||||| |||||||||||||||||||    
T  41319807 aagggcaacccagtgcactgaaactcccgcatatg-aagggttcgggaaggggtcccatcatttggtgtattgtacgcagccttaccctgttttttacac 41319905  T
Q  207 aagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||| |||||| || || || ||| ||||||||||||    
T  41319906 aagagactgtttccaggacttaaacctgtgacctttca 41319943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 110 - 231
Target Start/End: Complemental strand, 45402251 - 45402128
Alignment:
Q  110 gggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcag-tctt--accctgttttttacac 206  Q
    |||||||| |||||||||||||||||||||||| | || ||| ||| |||||||||||||| |||||||||||||||  |||  |||||| |||||||||    
T  45402251 gggcaacccggtgcactaaagctcccgcatacgcagggtctgggaaggggtcccaccatttggtgtattgtacgcagaacttgaaccctg-tttttacac 45402153  T
Q  207 aagaggctgtttacacgatttgaac 231  Q
    |||||||||||| || || ||||||    
T  45402152 aagaggctgtttccaggacttgaac 45402128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 218
Target Start/End: Original strand, 35253188 - 35253296
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||| | ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  35253188 aagggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 35253285  T
Q  208 agaggctgttt 218  Q
    |||||||||||    
T  35253286 agaggctgttt 35253296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 108 - 213
Target Start/End: Original strand, 1517312 - 1517418
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtttttt-acac 206  Q
    |||||||||| |||||||||||||||| ||||||| | || ||| ||| ||||||||||| || ||||||||||||||| |||| | |||||||| ||||    
T  1517312 aagggcaacccggtgcactaaagctcctgcatacgcagggtctgagaaggggtcccaccaattggtgtattgtacgcagccttatcatgttttttaacac 1517411  T
Q  207 aagaggc 213  Q
    |||||||    
T  1517412 aagaggc 1517418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 119 - 244
Target Start/End: Original strand, 45264411 - 45264537
Alignment:
Q  119 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggctgtt 217  Q
    |||||||||||||||||||||| | | || ||| ||| |||||||||||||| | ||||||| || ||| ||||| ||||||||| ||||||||| ||||    
T  45264411 ggtgcactaaagctcccgcatatgcagggtctgagaaggggtcccaccattttggtgtattgcacacagccttactctgttttttgcacaagaggttgtt 45264510  T
Q  218 tacacgatttgaacttgtgacctttca 244  Q
    | || || |||||| ||||||||||||    
T  45264511 tccaggacttgaacatgtgacctttca 45264537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 111 - 244
Target Start/End: Original strand, 45812541 - 45812672
Alignment:
Q  111 ggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaaga 210  Q
    ||||||| ||||||||| |||||||||||| | | ||  || ||| |||||||||||||| |||||||||| |||| |||||||  | ||||||||||||    
T  45812541 ggcaacccggtgcactagagctcccgcatatgcagggtttgggaaggggtcccaccatttggtgtattgtatgcagccttaccc--tcttttacacaaga 45812638  T
Q  211 ggctgtttacacgatttgaacttgtgacctttca 244  Q
    | |||||| || || |||||| ||||||||||||    
T  45812639 gactgttttcaggacttgaacctgtgacctttca 45812672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 47214666 - 47214532
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    ||||| || ||||||||||| |||||||||||| | | || ||| ||| |||||||||||||| ||||||||||||||  |||||||||  ||||| |||    
T  47214666 aagggtaatctggtgcactagagctcccgcatatgcagggtctgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg--ttttaaaca 47214569  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||| |||||| || || ||||||  |||||||||||    
T  47214568 agagactgtttccaggacttgaacccgtgacctttca 47214532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 99 - 218
Target Start/End: Original strand, 31382206 - 31382324
Alignment:
Q  99 aaaaacaataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtt 198  Q
    ||||| || |||||||||| ||| || ||||||||||||||| | | || |   ||| |||||||||||||| ||||||||||||||| |||| |||| |    
T  31382206 aaaaaaaaaaagggcaacccggtacagtaaagctcccgcatatgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttatcctg-t 31382304  T
Q  199 ttttacacaagaggctgttt 218  Q
    ||||||||||||||||||||    
T  31382305 ttttacacaagaggctgttt 31382324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 23796622 - 23796512
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    ||||||| || |||||||||||||||| ||||| | | || ||| ||| ||||| |||||||| ||||||||||||||  |||||  || ||||||||||    
T  23796622 aagggcagcccggtgcactaaagctccagcatatgcagggtctgggaaggggtctcaccatttggtgtattgtacgcaaccttacattgatttttacaca 23796523  T
Q  208 agaggctgttt 218  Q
    |||||||||||    
T  23796522 agaggctgttt 23796512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 161 - 210
Target Start/End: Original strand, 4430080 - 4430129
Alignment:
Q  161 cccaccatttagtgtattgtacgcagtcttaccctgttttttacacaaga 210  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||    
T  4430080 cccaccatttggtgtattgtacgcagtcttaccctgttttttacacaaga 4430129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 6983812 - 6983946
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    ||||||| || ||||||| |||||||| || |||| | || | |  || |||||||||||||| ||||||||||||||  |||||||||||||||| ||     
T  6983812 aagggcagcccggtgcaccaaagctcctgcctacgcagggtccggaaaggggtcccaccatttggtgtattgtacgcatacttaccctgttttttatac- 6983910  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
     |||||||||| || || |||||| ||||||||||||    
T  6983911 -gaggctgtttccaggacttgaacctgtgacctttca 6983946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 202
Target Start/End: Original strand, 18741958 - 18742054
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca--tttagtgtattgtacgcagtcttaccctgtttttt 202  Q
    ||||| |||| ||||||||||||||| |||||||| | || ||| ||| |||||||||||  ||| ||||||||||||||| |||||||||||||||    
T  18741958 aagggaaacccggtgcactaaagctctcgcatacgcagggtctgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttt 18742054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 116 - 218
Target Start/End: Complemental strand, 19701720 - 19701617
Alignment:
Q  116 cctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggct 214  Q
    ||||||||||||||||||||||||||| | || | | ||| ||| |||||||||| | |||||||||| ||  ||||||  |||||||||||||||||||    
T  19701720 cctggtgcactaaagctcccgcatacgcagggtccgggaaggggccccaccattttggtgtattgtacccatccttaccaagttttttacacaagaggct 19701621  T
Q  215 gttt 218  Q
    ||||    
T  19701620 gttt 19701617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 129 - 244
Target Start/End: Original strand, 25468285 - 25468400
Alignment:
Q  129 agctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttg 228  Q
    |||||||||||||| | || ||| |||  ||||| ||||||| ||||||||||||||  ||||||||| ||||||||||||||| ||||| || || |||    
T  25468285 agctcccgcatacgcagggtctgggaagaggtccaaccatttggtgtattgtacgcaaccttaccctgatttttacacaagaggttgtttccaggacttg 25468384  T
Q  229 aacttgtgacctttca 244  Q
    |||   ||||||||||    
T  25468385 aacccatgacctttca 25468400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 119 - 244
Target Start/End: Original strand, 2435798 - 2435924
Alignment:
Q  119 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggctgtt 217  Q
    ||||||||||||||||||||| || | ||   |  || |||||||||||||| | |||||||||||||| |||||||| ||||| ||||| |||||||||    
T  2435798 ggtgcactaaagctcccgcatgcggagggtacggaaaggggtcccaccattttggtgtattgtacgcaggcttaccctatttttcacacaggaggctgtt 2435897  T
Q  218 tacacgatttgaacttgtgacctttca 244  Q
    | || || ||||||  |||||||||||    
T  2435898 tccaggacttgaacccgtgacctttca 2435924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 200
Target Start/End: Original strand, 10378738 - 10378828
Alignment:
Q  110 gggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtttt 200  Q
    ||||| || |||||||||||||||||||||| | | || |   ||| |||||||||||||| ||||||||||||||| |||||||||||||    
T  10378738 gggcagcccggtgcactaaagctcccgcatatgcagggtccaagaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttt 10378828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 17470411 - 17470457
Alignment:
Q  172 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  17470411 gtgtattgtacgcagccttaccctgttttttacacaagaggctgttt 17470457  T

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Target: chr1; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 109 - 208
Target Start/End: Original strand, 19932755 - 19932856
Alignment:
Q  109 agggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttacac 206  Q
    |||||||||||||||||||| | ||  ||||||| | || | | ||| ||||||||||||||   ||||||||||||||| |||||||||||||||||||    
T  19932755 agggcaacctggtgcactaatgatcttgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttacac 19932854  T
Q  207 aa 208  Q
    ||    
T  19932855 aa 19932856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 213
Target Start/End: Complemental strand, 8197200 - 8197095
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| ||| ||||||||||||  |||||| | || | | ||| |||||| ||||||| ||||| |||||| || |||||| |||||||||||||    
T  8197200 aagggcaacccggtacactaaagctccaacatacgcagggtccgagaaggggtcctaccatttggtgtactgtacgtagccttaccatgttttttacaca 8197101  T
Q  208 agaggc 213  Q
    ||||||    
T  8197100 agaggc 8197095  T

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Target: chr1; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 19414594 - 19414460
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| ||||||||| |||||||||||| | | ||   | ||| |||||||||||||| ||||||||||||||| |||| ||||  ||||||| |    
T  19414594 aagggcaacccggtgcactagagctcccgcatatgcagggtacgggaaggggtcccaccatttggtgtattgtacgcagccttaacctg--ttttacata 19414497  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||| |||  | || ||||||  |||||||||||    
T  19414496 agaggctctttctaggacttgaacccgtgacctttca 19414460  T

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Target: chr1; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 119 - 244
Target Start/End: Complemental strand, 35019375 - 35019251
Alignment:
Q  119 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    ||||||||||||||| |||||||| | || ||| ||  ||||||||||| || |||||||||| |||| ||||  ||| |||||| |||||||| |||||    
T  35019375 ggtgcactaaagctctcgcatacgcagggtctgggag-gggtcccaccaattggtgtattgtatgcagccttatactgatttttatacaagaggttgttt 35019277  T
Q  219 acacgatttgaacttgtgacctttca 244  Q
    ||| || |||||  ||||||||||||    
T  35019276 acaggacttgaatctgtgacctttca 35019251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 9939621 - 9939482
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaa-agggtcccacca--tttagtgtattgtacgcagtcttaccctgttttttac 204  Q
    ||||| |||| |||||||||||||||||||||||| | || | | |||  |||||||||||  ||| |||||||| |||||  |||||| ||||| |||     
T  9939621 aagggtaacccggtgcactaaagctcccgcatacgcagggtccgagaagggggtcccaccatttttggtgtattgcacgcaaccttaccatgtttcttaa 9939522  T
Q  205 acaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||||| ||||| || || ||||||| |||||||||||    
T  9939521 acaagaggttgtttccaggacttgaactcgtgacctttca 9939482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 162 - 218
Target Start/End: Original strand, 34679274 - 34679330
Alignment:
Q  162 ccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    |||||||||  ||||| |||||||||||||||||||||||||||||||||| |||||    
T  34679274 ccaccatttgatgtatagtacgcagtcttaccctgttttttacacaagaggttgttt 34679330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 202
Target Start/End: Complemental strand, 46859213 - 46859129
Alignment:
Q  119 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgtttttt 202  Q
    ||||||||||| ||||| |||||| |||| |||  || | |||||||||||| | ||||||||||||||||||||||||||||||    
T  46859213 ggtgcactaaaactcccacatacgcaaggcctgaaaatgagtcccaccattttggtgtattgtacgcagtcttaccctgtttttt 46859129  T

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Target: chr1; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 218
Target Start/End: Complemental strand, 11596650 - 11596560
Alignment:
Q  127 aaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    |||||||||||||||| | || |   ||| |||||||||||||| ||||||| ||||||| |||||||||| |||||||||||||| |||||    
T  11596650 aaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattatacgcagccttaccctgt-ttttacacaagaggttgttt 11596560  T

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Target: chr1; HSP #43
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 120 - 218
Target Start/End: Original strand, 12126850 - 12126946
Alignment:
Q  120 gtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    |||||||| |||||||||||| | | || | | ||| ||||||||| |||| ||||||||||||||| |||||||||  |||||||||||| |||||||    
T  12126850 gtgcactacagctcccgcatatgcagggtccgggaaggggtcccacaatttggtgtattgtacgcagccttaccctg--ttttacacaagaagctgttt 12126946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 199
Target Start/End: Complemental strand, 43768296 - 43768205
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttt 199  Q
    ||||||| || |||||| ||||||||||| ||||| | || ||| ||| ||||||||||| || |||||||||| |||| ||||||||||||    
T  43768296 aagggcagcccggtgcattaaagctcccgtatacgcagggtctgggaaggggtcccaccaattggtgtattgtaggcagccttaccctgttt 43768205  T

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Target: chr1; HSP #45
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 127 - 218
Target Start/End: Original strand, 44485129 - 44485220
Alignment:
Q  127 aaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    |||||||||||||||||| |  | | ||| |||||| ||||||| ||||||||||||||| |||||| ||| ||||||||||| || |||||    
T  44485129 aaagctcccgcatacgtaggatccgggaaggggtccaaccatttggtgtattgtacgcagccttaccatgtcttttacacaagtggttgttt 44485220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 127 - 197
Target Start/End: Complemental strand, 15505702 - 15505632
Alignment:
Q  127 aaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgt 197  Q
    |||||||||||||||| | ||   | ||| |||||||||||||| ||||||||||||||||||||||||||    
T  15505702 aaagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgt 15505632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 121 - 218
Target Start/End: Complemental strand, 43207640 - 43207542
Alignment:
Q  121 tgcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca-tttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    ||||||||||||| ||||||| || || ||| |||  |||||||||| ||| |||||||||| || |||||||||||||||| ||| |||||| |||||    
T  43207640 tgcactaaagctctcgcatacatagggtctgggaagaggtcccaccaatttggtgtattgtatgccgtcttaccctgtttttcacataagaggttgttt 43207542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 109 - 231
Target Start/End: Complemental strand, 22325049 - 22324927
Alignment:
Q  109 agggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttacac 206  Q
    |||||| ||||||||||||||||||||||||||| | || | | ||  |||  |||||||||   |||||||||| |||| |||||||||||||| ||||    
T  22325049 agggcagcctggtgcactaaagctcccgcatacgcagggtcgg-gacggggctccaccatttttggtgtattgtatgcagccttaccctgttttt-acac 22324952  T
Q  207 aagaggctgtttacacgatttgaac 231  Q
    |||||||||||| || || ||||||    
T  22324951 aagaggctgtttccaagacttgaac 22324927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 244
Target Start/End: Original strand, 35117777 - 35117905
Alignment:
Q  119 ggtgcactaaagctcccgcat-acgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttacacaagaggctg 215  Q
    |||||||||||||||| |||| ||| | || | | ||| |||||||| |||||   ||||||||||| ||| |||||||||| ||||||||||||||||     
T  35117777 ggtgcactaaagctcctgcattacgcagggtccgggaaggggtcccatcatttttggtgtattgtacacagccttaccctgtattttacacaagaggcta 35117876  T
Q  216 tttacacgatttgaacttgtgacctttca 244  Q
    ||| || || ||||||  |||||||||||    
T  35117877 tttccaggacttgaacccgtgacctttca 35117905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 110 - 242
Target Start/End: Original strand, 39214961 - 39215094
Alignment:
Q  110 gggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtg-tattgtacgcagtcttaccctgttttttacacaa 208  Q
    ||||| || |||||||||||||| || |||||| | ||  || ||| ||| |||||||||| |   |||||||||||| ||||||| |||||||||||||    
T  39214961 gggcagcccggtgcactaaagcttccacatacgcagggtttgggaaggggacccaccattttggaatattgtacgcagccttacccagttttttacacaa 39215060  T
Q  209 gaggctgtttacacgatttgaacttgtgaccttt 242  Q
    |||| ||||| ||  | ||||||||| |||||||    
T  39215061 gaggttgtttccagtacttgaacttgggaccttt 39215094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 124 - 244
Target Start/End: Original strand, 18335305 - 18335425
Alignment:
Q  124 actaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacg 223  Q
    ||||||||||||| ||||  | || ||  |||||||||||| |||||  |||||||||||||   |||||||  |||||| ||||||| |||||| || |    
T  18335305 actaaagctcccgtatacacatggtctaggaaagggtcccatcatttgatgtattgtacgcaactttaccctaatttttaaacaagagactgtttccagg 18335404  T
Q  224 atttgaacttgtgacctttca 244  Q
    | || ||||||||||||||||    
T  18335405 actttaacttgtgacctttca 18335425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 164 - 244
Target Start/End: Complemental strand, 24564445 - 24564365
Alignment:
Q  164 accatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||| ||| ||||||||||  ||||||||||||||||||||||||| ||||| || || |||||  || |||||||||    
T  24564445 accatttggtgaattgtacgcacccttaccctgttttttacacaagaggttgtttccaagacttgaatctgcgacctttca 24564365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 201
Target Start/End: Original strand, 42304208 - 42304303
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca--tttagtgtattgtacgcagtcttaccctgttttt 201  Q
    |||||||| | ||||||||||||||||| |||||| | || | | ||| |||||||||||  ||| ||||||||||||||  ||||||||||||||    
T  42304208 aagggcaatccggtgcactaaagctcccacatacgcagggtccgggaaggggtcccaccattttttgtgtattgtacgcaaccttaccctgttttt 42304303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 109 - 244
Target Start/End: Original strand, 15511150 - 15511288
Alignment:
Q  109 agggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgta--cgcagtcttaccctgttttttaca 205  Q
    |||||| || ||||||||||||||| | |||||| | || |   ||| |||| ||||||||| | |||||||||  ||||| ||||||||||||||||||    
T  15511150 agggcagcccggtgcactaaagctcacacatacgcagggtccaggaaggggtaccaccattttggtgtattgtatccgcagccttaccctgttttttaca 15511249  T
Q  206 caagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||||| |||| || || || ||  ||||||||||||    
T  15511250 caagaggcggtttccaggacttcaatatgtgacctttca 15511288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 108 - 214
Target Start/End: Original strand, 20999851 - 20999957
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagg-gctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacac 206  Q
    ||||||| || ||||||||||||||||||| |||| | || || | ||| ||| |||| ||||| ||||||||||||||| ||| || ||||||||||||    
T  20999851 aagggcagcccggtgcactaaagctcccgcgtacgcagggtgccg-gaaggggccccatcatttggtgtattgtacgcagccttgccttgttttttacac 20999949  T
Q  207 aagaggct 214  Q
    ||| ||||    
T  20999950 aagtggct 20999957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 113 - 231
Target Start/End: Complemental strand, 30682963 - 30682848
Alignment:
Q  113 caacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagagg 212  Q
    |||| |||||||| |||||||||||||||| | || | | ||| ||||||||||||||  ||||| |||| || ||||||| ||||||| ||||||||||    
T  30682963 caacttggtgcac-aaagctcccgcatacgcacggtccgggaaggggtcccaccatttgttgtat-gtacacaatcttaccttgttttt-acacaagagg 30682867  T
Q  213 ctgtttacacgatttgaac 231  Q
    || ||| || |||||||||    
T  30682866 ctattttcaggatttgaac 30682848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 217
Target Start/End: Original strand, 27136701 - 27136762
Alignment:
Q  157 gggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggctgtt 217  Q
    |||||||||||||| | |||||||||||||  |||||| |||||||||||||||||| ||||    
T  27136701 gggtcccaccattttggtgtattgtacgcaaccttaccatgttttttacacaagaggttgtt 27136762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 244
Target Start/End: Complemental strand, 52910311 - 52910238
Alignment:
Q  172 gtgtattgtacgcagtcttaccctgtttttt-acacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||| ||||| ||||||||||||| ||  |||||||||||| || || |||||| ||||||||||||    
T  52910311 gtgtattgtacacagtcctaccctgtttttttacctaagaggctgtttccaagagttgaacctgtgacctttca 52910238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 240
Target Start/End: Original strand, 50760291 - 50760359
Alignment:
Q  172 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacct 240  Q
    ||||||| ||||||| ||||||| ||||| ||||||||||||||||| || || ||||||  |||||||    
T  50760291 gtgtattatacgcagccttacccagttttatacacaagaggctgttttcaggacttgaacccgtgacct 50760359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 161 - 244
Target Start/End: Original strand, 31272429 - 31272511
Alignment:
Q  161 cccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||  |||  ||||||||| |||||| |||||| ||||||||||| ||||| || || |||||| ||||||||||||    
T  31272429 cccaccatttgatgtgctgtacgcagccttaccatgtttt-tacacaagaggttgtttccaggacttgaacctgtgacctttca 31272511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 153 - 218
Target Start/End: Original strand, 19656151 - 19656217
Alignment:
Q  153 gaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    |||||||||| ||||||| | ||||||||||  ||  ||||| ||||||||||||||||||||||||    
T  19656151 gaaagggtcctaccattttggtgtattgtacatagcgttaccatgttttttacacaagaggctgttt 19656217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 157 - 218
Target Start/End: Complemental strand, 33223092 - 33223031
Alignment:
Q  157 gggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    |||||||||||||| | |||||||||||||  ||| |||||||||| ||||||||||||||||    
T  33223092 gggtcccaccattttggtgtattgtacgcaacctttccctgttttt-acacaagaggctgttt 33223031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 170
Target Start/End: Complemental strand, 50606560 - 50606498
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattt 170  Q
    |||||||||| |||||||||||||||||||||| | | || | | ||| ||||||||||||||    
T  50606560 aagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattt 50606498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 179 - 244
Target Start/End: Complemental strand, 22327185 - 22327120
Alignment:
Q  179 gtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||| ||| ||||||||||||||||||||||||| ||||| || || ||||||  | |||||||||    
T  22327185 gtacacagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgcgacctttca 22327120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 244
Target Start/End: Complemental strand, 23371268 - 23371145
Alignment:
Q  119 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    |||||||||||||| || |||||| | || ||| ||| |||||||| ||||| ||||||||||| ||  ||| ||| ||||||||| |||| ||||||||    
T  23371268 ggtgcactaaagctaccacatacgcagggtctg-gaaggggtcccagcatttggtgtattgtacacaaccttgccc-gttttttacccaagtggctgttt 23371171  T
Q  219 acacgatttgaacttgtgacctttca 244  Q
      | || ||||||  |||||||||||    
T  23371170 ctaggacttgaacccgtgacctttca 23371145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 34149010 - 34149071
Alignment:
Q  157 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    ||||| |||||||| || | |||||||||  |||||||| |||| |||||||||||||||||    
T  34149010 gggtctcaccatttggtcttttgtacgcaaccttaccctattttctacacaagaggctgttt 34149071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 20036329 - 20036241
Alignment:
Q  157 gggtcccaccatttagtgtattgtacgcagtcttaccctgttt-tttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||| ||||||||| |||||||| ||||| ||||||||| | | ||||||||||||  ||||| || || ||||||  |||||||||||    
T  20036329 gggttccaccatttggtgtattgaacgcaatcttaccctttctctttacacaagagtttgtttccaggacttgaacccgtgacctttca 20036241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 174 - 218
Target Start/End: Original strand, 20169156 - 20169200
Alignment:
Q  174 gtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    ||||||||| |||||||||| | |||||||||||||||| |||||    
T  20169156 gtattgtacacagtcttacctttttttttacacaagagggtgttt 20169200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 201
Target Start/End: Original strand, 21910699 - 21910743
Alignment:
Q  157 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttt 201  Q
    |||||||||||||| ||||||||||||||  |||||||| |||||    
T  21910699 gggtcccaccatttggtgtattgtacgcaaccttaccctattttt 21910743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 188 - 216
Target Start/End: Complemental strand, 25290242 - 25290214
Alignment:
Q  188 cttaccctgttttttacacaagaggctgt 216  Q
    |||||||||||||||||||||||||||||    
T  25290242 cttaccctgttttttacacaagaggctgt 25290214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 105 - 244
Target Start/End: Original strand, 11617586 - 11617725
Alignment:
Q  105 aataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttac 204  Q
    ||||||||||||| |||||||||||| ||| ||||||| | || |   ||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  11617586 aataagggcaacccggtgcactaaaggtcctgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttac 11617685  T
Q  205 acaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||||| ||||| || || |||||| ||||||||||||    
T  11617686 acaagaggttgtttccaggacttgaacctgtgacctttca 11617725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 108 - 243
Target Start/End: Original strand, 2541020 - 2541155
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    ||||| |||| |||||||||||||||||||||||| | || | | ||| |||||||||||||| |||||| |||||||| ||||||||||||||||||||    
T  2541020 aagggaaacccggtgcactaaagctcccgcatacgcagggaccgggaaggggtcccaccatttggtgtatagtacgcagccttaccctgttttttacaca 2541119  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttc 243  Q
    ||||||||||| || || ||||||  ||||||||||    
T  2541120 agaggctgtttccaggacttgaacccgtgacctttc 2541155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 108 - 242
Target Start/End: Original strand, 23419675 - 23419809
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    ||||||| || | ||||||||||| |||||| ||| |||| ||  ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23419675 aagggcagcccgatgcactaaagcccccgcacacgcaaggtctaggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacaca 23419774  T
Q  208 agaggctgtttacacgatttgaacttgtgaccttt 242  Q
    ||||||||||| ||  | |||||| ||||||||||    
T  23419775 agaggctgtttccagaacttgaacctgtgaccttt 23419809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 99 - 243
Target Start/End: Original strand, 19426882 - 19427025
Alignment:
Q  99 aaaaacaataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtt 198  Q
    ||||| || |||||||||| |||||||| |||||| |||||| | | || | | ||| |||||||||||||| |||||||||||||||||||||||| ||    
T  19426882 aaaaaaaaaaagggcaacccggtgcactgaagctctcgcatatgcagggtccgagaa-gggtcccaccatttggtgtattgtacgcagtcttaccctatt 19426980  T
Q  199 ttttacacaagaggctgtttacacgatttgaacttgtgacctttc 243  Q
    |||||||||||||||||||| || || ||||||  ||||||||||    
T  19426981 ttttacacaagaggctgtttccaggacttgaacccgtgacctttc 19427025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 241
Target Start/End: Complemental strand, 7879781 - 7879639
Alignment:
Q  99 aaaaacaataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtt 198  Q
    ||||| || |||||||||| |||||||| ||||||||||||||| | || | | ||| |||||||||||||| ||||||||||||||| |||||| ||||    
T  7879781 aaaaaaaaaaagggcaacccggtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccttgtt 7879682  T
Q  199 ttttacacaagaggctgtttacacgatttgaacttgtgacctt 241  Q
    |||||||||||||  ||||| || || ||||||  ||||||||    
T  7879681 ttttacacaagagattgtttccaggacttgaacccgtgacctt 7879639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 21172010 - 21172144
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  21172010 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 21172107  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||| || || ||||||  |||||||||||    
T  21172108 agaggctgtttccaggacttgaacccgtgacctttca 21172144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 31591110 - 31591244
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| ||||||||| |||||||||||| | |||| | | ||| ||||||||||||||| |||||||||||||| ||||| |||  |||||||||    
T  31591110 aagggcaacccggtgcactagagctcccgcatatgcaaggtccgggaaggggtcccaccatttattgtattgtacgcagccttactctg--ttttacaca 31591207  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||| ||||| || || ||||||| |||||||||||    
T  31591208 agaggttgtttccaggacttgaactcgtgacctttca 31591244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 32758393 - 32758259
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||| ||| |||||||||  |||||||||    
T  32758393 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctg--ttttacaca 32758296  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||| || || |||||| ||||||||||||    
T  32758295 agaggctgtttccaggacttgaacctgtgacctttca 32758259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 108 - 241
Target Start/End: Complemental strand, 42798803 - 42798670
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| | ||||||| |||||||||||| | | || | | |||||||||||||||||| ||||||||||||||| |||||| |||||||||||||    
T  42798803 aagggcaacccgatgcactatagctcccgcatatgcagggtccgggaaagggtcccaccatttggtgtattgtacgcagccttaccttgttttttacaca 42798704  T
Q  208 agaggctgtttacacgatttgaacttgtgacctt 241  Q
    |||| |||||| || || ||||||  ||||||||    
T  42798703 agagactgtttccaagacttgaacccgtgacctt 42798670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 243
Target Start/End: Complemental strand, 27629768 - 27629633
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| |||||||| ||||| ||||||| | | || | | ||| |||||||||||||| ||||||| ||||||  ||||||||||||||||||||    
T  27629768 aagggcaacccggtgcactgaagctaccgcatatgcagggcccgggaaggggtcccaccatttggtgtattttacgcaaccttaccctgttttttacaca 27629669  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttc 243  Q
    ||||||||||| || || ||||||  ||||||||||    
T  27629668 agaggctgtttccaggacttgaacccgtgacctttc 27629633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 111 - 244
Target Start/End: Original strand, 33871914 - 33872046
Alignment:
Q  111 ggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaaga 210  Q
    ||||||||||||||||||||||| |||||||  | || ||| ||| |||||||||||||| ||||||||||||||| |||| |||| |||||||||||||    
T  33871914 ggcaacctggtgcactaaagctctcgcatacacagggtctgggaaggggtcccaccatttggtgtattgtacgcagccttatcctg-tttttacacaaga 33872012  T
Q  211 ggctgtttacacgatttgaacttgtgacctttca 244  Q
    || ||||| || || ||||||  | |||||||||    
T  33872013 ggttgtttccaggacttgaacccgcgacctttca 33872046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 42391101 - 42391235
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  42391101 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 42391198  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||| ||||||| || || ||||||  |||||||||||    
T  42391199 agaagctgtttccaggacttgaacccgtgacctttca 42391235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 108 - 241
Target Start/End: Complemental strand, 42805660 - 42805525
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||||| |||||||||||||||||||||| |   || | | ||| |||||||||||||  | ||||||||||| ||| ||||||||||||||||||    
T  42805660 aagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacacagccttaccctgttttttaca 42805561  T
Q  206 caagaggctgtttacacgatttgaacttgtgacctt 241  Q
    ||||||||||||| || || ||||||  ||||||||    
T  42805560 caagaggctgtttccaggacttgaacccgtgacctt 42805525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 108 - 241
Target Start/End: Complemental strand, 47716595 - 47716460
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||||| ||||||| |||||||||||||| |   || | | ||| |||||||||||||  | ||||||||||||||| ||||||||||||||||||    
T  47716595 aagggcaacccggtgcaccaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttaca 47716496  T
Q  206 caagaggctgtttacacgatttgaacttgtgacctt 241  Q
    ||||||||||||| || || ||||||  ||||||||    
T  47716495 caagaggctgtttccaggacttgaacccgtgacctt 47716460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 10693074 - 10693208
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    ||||||||||  |||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||  | |||||||||    
T  10693074 aagggcaacccagtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccc--tcttttacaca 10693171  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||| || || ||||||  |||||||||||    
T  10693172 agaggctgtttccaggacttgaacccgtgacctttca 10693208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 127 - 244
Target Start/End: Original strand, 28362165 - 28362282
Alignment:
Q  127 aaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatt 226  Q
    ||||||||| |||| | |||| ||| ||| |||||||||||||| ||||||||||||||| ||||||  |||||||||||||||||| ||||  | || |    
T  28362165 aaagctcccacatatgcaaggtctgggaaggggtcccaccatttggtgtattgtacgcagccttaccaagttttttacacaagaggcagtttctaggact 28362264  T
Q  227 tgaacttgtgacctttca 244  Q
    ||||| ||||||||||||    
T  28362265 tgaacctgtgacctttca 28362282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 109 - 241
Target Start/End: Original strand, 35334818 - 35334948
Alignment:
Q  109 agggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaa 208  Q
    |||| |||| |||||||||||||||| ||||||| | || | | ||| |||||||||||||  ||||||||||| |||||||||||||||||||||||      
T  35334818 agggaaacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacacagtcttaccctgttttttacac-- 35334915  T
Q  209 gaggctgtttacacgatttgaacttgtgacctt 241  Q
    ||| |||||| || || ||||||| ||||||||    
T  35334916 gagactgtttccaggacttgaactcgtgacctt 35334948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 217
Target Start/End: Original strand, 35787270 - 35787378
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| |||||| | ||||||||||||||| |||| | | ||| ||||||| |||||| ||||||||||||||  |||||| || ||||||||||    
T  35787270 aagggcaacccggtgcattgaagctcccgcatacgcaaggtccgggaaggggtcccgccatttggtgtattgtacgcaaccttaccatg-tttttacaca 35787368  T
Q  208 agaggctgtt 217  Q
    ||||||||||    
T  35787369 agaggctgtt 35787378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 99 - 244
Target Start/End: Complemental strand, 43557618 - 43557470
Alignment:
Q  99 aaaaacaataagggcaacctggtgcactaaa-gctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccct 195  Q
    ||||| || |||||||||| ||||||||||| ||||||||||||| |  | | | ||  |||||||||||||  | ||||||||||||||| ||||| ||    
T  43557618 aaaaaaaaaaagggcaacccggtgcactaaaagctcccgcatacgcagagtccgggagggggtcccaccattattggtgtattgtacgcagccttactct 43557519  T
Q  196 gttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||||||||||||||| || || ||||||   ||||||||||    
T  43557518 gttttttacacaagaggctgtttccaggacttgaacccatgacctttca 43557470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 19265947 - 19265813
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    ||||||| || ||||||||||||||||| |||| ||| || | | ||| |||||||||||||| ||||||||||||||| ||||||||  ||||||||||    
T  19265947 aagggcagcccggtgcactaaagctcccacatatgta-ggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccct-ctttttacaca 19265850  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    || |||||| | || || ||||||  |||||||||||    
T  19265849 agcggctgtatccaagacttgaacccgtgacctttca 19265813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 34626209 - 34626344
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| | || ||||||||||||||||||| | || | | ||| || ||||||||||| |||||||| |||||| ||||||||| ||||||||||    
T  34626209 aagggcaacccgatgaactaaagctcccgcatacgcagggtccgggaagggatcccaccatttggtgtattgaacgcagccttaccctg-tttttacaca 34626307  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
     |||||||||| || || |||||  |||| |||||||    
T  34626308 ggaggctgtttccaggacttgaatctgtggcctttca 34626344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 122 - 241
Target Start/End: Original strand, 42101899 - 42102019
Alignment:
Q  122 gcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca-tttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttac 220  Q
    ||||||||||| ||| ||||| | || | | ||||||||||||||| ||||| ||| |||||||||| ||||||||||||||||  |||||||||||| |    
T  42101899 gcactaaagctgccggatacgcagggtccgggaaagggtcccaccactttagagtactgtacgcagtgttaccctgttttttacggaagaggctgtttcc 42101998  T
Q  221 acgatttgaacttgtgacctt 241  Q
    | || |||||||| |||||||    
T  42101999 aggacttgaacttttgacctt 42102019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 22698968 - 22699074
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaa-gggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttac 204  Q
    ||||| |||| ||||||||| |||||||||||||  | || | | |||| ||||||||||||||   |||||||||||||||||||||||||||||||||    
T  22698968 aagggtaacccggtgcactatagctcccgcatacacagggtccgggaaaagggtcccaccatttttggtgtattgtacgcagtcttaccctgttttttac 22699067  T
Q  205 acaagag 211  Q
    |||||||    
T  22699068 acaagag 22699074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 42477005 - 42476897
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||||||||||||| |||||||||||| | |  | ||  ||| |||||||||||||| ||||||||||||||| |||||| ||  |||||||||    
T  42477005 aagggcaacctggtgcactagagctcccgcatatgcagagcctaggaaggggtcccaccatttggtgtattgtacgcagccttaccttg--ttttacaca 42476908  T
Q  208 agaggctgttt 218  Q
    |||| ||||||    
T  42476907 agagactgttt 42476897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 48123534 - 48123621
Alignment:
Q  157 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||||||||||| |||||||||| ||||| |||||||||| ||||||||||||||||||| || || ||||||   ||||||||||    
T  48123534 gggtcccaccatttggtgtattgtatgcagttttaccctgttatttacacaagaggctgtttccaggacttgaacccatgacctttca 48123621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 218
Target Start/End: Original strand, 48735123 - 48735231
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| ||||||  || |||||||||    
T  48735123 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttacc--gtgttttacaca 48735220  T
Q  208 agaggctgttt 218  Q
    ||||| |||||    
T  48735221 agaggttgttt 48735231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 214
Target Start/End: Original strand, 14099008 - 14099113
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    ||||||| |||||||||  ||| |||| ||||||||| ||   | ||| |||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  14099008 aagggcagcctggtgcaa-aaatctcctgcatacgtagggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaacctgttttttacaca 14099106  T
Q  208 agaggct 214  Q
    | |||||    
T  14099107 aaaggct 14099113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 214
Target Start/End: Original strand, 14409025 - 14409130
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    ||||||| |||||||||  ||| |||| ||||||||| ||   | ||| |||||||||||||| |||||||||||||||||||| |||||||||||||||    
T  14409025 aagggcagcctggtgcaa-aaatctcctgcatacgtagggttcgggaaggggtcccaccatttggtgtattgtacgcagtcttaacctgttttttacaca 14409123  T
Q  208 agaggct 214  Q
    | |||||    
T  14409124 aaaggct 14409130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 109 - 243
Target Start/End: Original strand, 18512455 - 18512588
Alignment:
Q  109 agggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaa 208  Q
    |||||||||  |||||| |||||||||||||||| | || | | ||| |||||||||||||  ||||||||||||||| ||||||||  |||||||||||    
T  18512455 agggcaacccagtgcaccaaagctcccgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacgcagccttaccct-atttttacacaa 18512553  T
Q  209 gaggctgtttacacgatttgaacttgtgacctttc 243  Q
    || | ||||| || || ||||||  ||||||||||    
T  18512554 gatgttgtttccaggacttgaacccgtgacctttc 18512588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 29907552 - 29907417
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacac 206  Q
    |||||||||| |||||||||||||||||||||||  | || | | ||  |||||||||||||| | ||||||| |||||| ||||| || ||||||||||    
T  29907552 aagggcaacccggtgcactaaagctcccgcatac--agggtccgggatggggtcccaccattttggtgtattgaacgcagccttacactattttttacac 29907455  T
Q  207 aagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||||  | || ||||||  |||||||||||    
T  29907454 aagaggctgtttctaggacttgaacccgtgacctttca 29907417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 40464010 - 40463901
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||  |||||||| ||||||||||||||| | || | | ||| |||||||||||||| ||||||| ||||||| ||||||| | ||||||||||    
T  40464010 aagggcaactcggtgcactgaagctcccgcatacgcagggtccgagaaggggtcccaccatttggtgtattatacgcagccttacccag-tttttacaca 40463912  T
Q  208 agaggctgttt 218  Q
    |||| ||||||    
T  40463911 agagactgttt 40463901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 102 - 218
Target Start/End: Complemental strand, 16341419 - 16341302
Alignment:
Q  102 aacaataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgtttt 200  Q
    |||| |||||||| || ||||||| |||||||||||||| |  ||| | | |||  || |||||||||| | ||||||||||| || |||||||||||||    
T  16341419 aacattaagggcagcccggtgcaccaaagctcccgcatatgataggtccgggaagagggcccaccattttggtgtattgtacgtagccttaccctgtttt 16341320  T
Q  201 ttacacaagaggctgttt 218  Q
    ||||||||||||||||||    
T  16341319 ttacacaagaggctgttt 16341302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 18747621 - 18747484
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctg-ttttttacac 206  Q
    ||||||| || |||||||||||||||||||||||| | ||     ||| ||||||||||| || ||||||| ||||||| ||||||||| ||||||||||    
T  18747621 aagggcagcccggtgcactaaagctcccgcatacgcagggttcaggaaggggtcccaccaattggtgtattatacgcagccttaccctgcttttttacac 18747522  T
Q  207 aagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    || ||||||||| || || |||| |  |||||||||||    
T  18747521 aaaaggctgtttccaagacttgatcccgtgacctttca 18747484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 172 - 244
Target Start/End: Complemental strand, 7645026 - 7644954
Alignment:
Q  172 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||||||||||  |||||||||||||||||||||||||||||||| || || ||||||  |||||||||||    
T  7645026 gtgtattgtacgctatcttaccctgttttttacacaagaggctgtttccaggacttgaacccgtgacctttca 7644954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 119 - 238
Target Start/End: Complemental strand, 21566559 - 21566439
Alignment:
Q  119 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggctgtt 217  Q
    |||||||||||||||||||||| | | ||   | ||| |||||| ||||||| | |||||||||||||||||| | |||||||||||||||||||| |||    
T  21566559 ggtgcactaaagctcccgcatatgcagggttcgggaaggggtcctaccattttggtgtattgtacgcagtcttcctctgttttttacacaagaggcggtt 21566460  T
Q  218 tacacgatttgaacttgtgac 238  Q
    | || || |||||| ||||||    
T  21566459 tccaagacttgaacctgtgac 21566439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 126 - 218
Target Start/End: Complemental strand, 38604642 - 38604551
Alignment:
Q  126 taaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    ||||||||||||||||| | || | |  || ||||| |||||||| ||||||||||||||| |||||||||| ||||||||||||||||||||    
T  38604642 taaagctcccgcatacgcagggtccggaaaggggtctcaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagaggctgttt 38604551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 241
Target Start/End: Complemental strand, 46354281 - 46354195
Alignment:
Q  157 gggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctt 241  Q
    |||||||||||||  | ||||||||||||||| ||||||||||||||||||||||||| ||||| || || ||||||  ||||||||    
T  46354281 gggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttccaggacttgaacccgtgacctt 46354195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 154 - 231
Target Start/End: Original strand, 2662982 - 2663057
Alignment:
Q  154 aaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaac 231  Q
    ||||||||||||||||| ||||||||||||||| |||||||  | |||||||||||||||||||| || || ||||||    
T  2662982 aaagggtcccaccatttggtgtattgtacgcagccttaccc--tattttacacaagaggctgtttccaggacttgaac 2663057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 205
Target Start/End: Original strand, 23618978 - 23619075
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||||| | |||||||||||||| ||| ||| |||| ||||||| ||||||||||||||  |||||||||| ||  ||||| ||||||| ||||    
T  23618978 aagggcaacccgctgcactaaagctcctgcaaacgcaaggtctgcgaaggggtcccaccatttgatgtattgtacacaagcttactctgttttataca 23619075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 238
Target Start/End: Original strand, 8148947 - 8149077
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtttttt-acac 206  Q
    ||||| || ||| ||||||||| ||| |||||||| |||  ||| ||| |||||||||||||| ||||||||||||||  |||||||| |||||| ||||    
T  8148947 aagggtaatctgatgcactaaaactctcgcatacgcaagt-ctgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctattttttaacac 8149045  T
Q  207 aagaggctgtttacacgatttgaacttgtgac 238  Q
    ||||||  |||| || || ||||||| |||||    
T  8149046 aagaggtagttttcaggacttgaactcgtgac 8149077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 128 - 231
Target Start/End: Complemental strand, 19266564 - 19266461
Alignment:
Q  128 aagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgattt 227  Q
    ||||||||||||||| | || | | ||| || |||||| |||| ||||||||||||||| ||||||||||||||||| |||| |||| ||| || || ||    
T  19266564 aagctcccgcatacgcagggtccgggaagggatcccacaatttggtgtattgtacgcagccttaccctgttttttacgcaagtggctattttcaggactt 19266465  T
Q  228 gaac 231  Q
    ||||    
T  19266464 gaac 19266461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 27889317 - 27889395
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcag 186  Q
    |||||||||| |||| || |||||||||||||||| | || | | ||| |||||||||||||| |||||||||||||||    
T  27889317 aagggcaacccggtgtaccaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcag 27889395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 119 - 244
Target Start/End: Original strand, 47077867 - 47077990
Alignment:
Q  119 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    ||||||||| |||||||||||| ||| ||  || ||| |||||||||||||| ||||||||||||||   |||  || | ||||||||||||| ||||||    
T  47077867 ggtgcactagagctcccgcatatgtagggtttgggaaggggtcccaccattttgtgtattgtacgcaacttta--ctctattttacacaagagactgttt 47077964  T
Q  219 acacgatttgaacttgtgacctttca 244  Q
     || || ||||||  |||||||||||    
T  47077965 ccaggacttgaacccgtgacctttca 47077990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 214
Target Start/End: Complemental strand, 1408542 - 1408485
Alignment:
Q  157 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggct 214  Q
    ||||||||||||||  |||||||||| ||| |||||| ||||||||||||||||||||    
T  1408542 gggtcccaccatttgctgtattgtacacagccttaccttgttttttacacaagaggct 1408485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 244
Target Start/End: Complemental strand, 35203506 - 35203437
Alignment:
Q  175 tattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||||||||| |||||||||||||||||||  ||||| || || ||||||  |||||||||||    
T  35203506 tattgtacgcagtcttatcctgttttttacacaagagaatgtttccaggacttgaacccgtgacctttca 35203437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 241
Target Start/End: Original strand, 38262197 - 38262330
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||| | |||||||||||||||||||||||| |  |   | ||| |||||||| ||||| |||||||||| |||   ||||| | |||||||||||    
T  38262197 aagggcaatccggtgcactaaagctcccgcatacgcagtgttcgggaaggggtcccatcatttggtgtattgtatgcaacattaccatattttttacaca 38262296  T
Q  208 agaggctgtttacacgatttgaacttgtgacctt 241  Q
    |||| |||||| || || ||||||  ||||||||    
T  38262297 agagactgtttccaggacttgaacccgtgacctt 38262330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 218
Target Start/End: Complemental strand, 25198856 - 25198749
Alignment:
Q  112 gcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctg-ttttttacacaaga 210  Q
    |||||| ||||||||||||||| | |||||| | || ||| ||| || ||| ||||||||||| ||| ||||| |||||||| || |||||||||||| |    
T  25198856 gcaacccggtgcactaaagctctcacatacgaagggtctgggaagggatcctaccatttagtgcattatacgcggtcttaccttgtttttttacacaaaa 25198757  T
Q  211 ggctgttt 218  Q
    | ||||||    
T  25198756 gactgttt 25198749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 172 - 218
Target Start/End: Original strand, 5180222 - 5180268
Alignment:
Q  172 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    |||| |||||| |||||||||||||||||| ||||||||||||||||    
T  5180222 gtgtgttgtacacagtcttaccctgtttttgacacaagaggctgttt 5180268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 99 - 244
Target Start/End: Complemental strand, 11741936 - 11741793
Alignment:
Q  99 aaaaacaataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtt 198  Q
    |||||| |||||||||||| ||||||||| |||||||||||  | |    | | ||| || ||||||||||| ||||||||||||||| |||||||  |     
T  11741936 aaaaactataagggcaacccggtgcactagagctcccgcatgtgcagaatccgggaagggatcccaccatttggtgtattgtacgcagccttaccc--ta 11741839  T
Q  199 ttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||||| ||| ||||||| || || ||||||   ||||||||||    
T  11741838 ttttacactagaagctgttttcaggacttgaacccatgacctttca 11741793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 142
Target Start/End: Original strand, 45018924 - 45018958
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacg 142  Q
    |||||||||||||||||||||||||||||||||||    
T  45018924 aagggcaacctggtgcactaaagctcccgcatacg 45018958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 244
Target Start/End: Complemental strand, 12473374 - 12473302
Alignment:
Q  172 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||||||  |||||||||||||| |||||||||| ||||| || || ||||||   ||||||||||    
T  12473374 gtgtattgtacgcatccttaccctgtttttgacacaagaggttgtttgcaggacttgaacccatgacctttca 12473302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 197 - 244
Target Start/End: Original strand, 1524276 - 1524323
Alignment:
Q  197 ttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||| |||||||||||||||||| | || |||||||||||||||||||    
T  1524276 ttttatacacaagaggctgtttataagacttgaacttgtgacctttca 1524323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 214
Target Start/End: Complemental strand, 23231680 - 23231585
Alignment:
Q  119 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggct 214  Q
    |||||||||||||| ||||||||| | ||   | ||| |||||||| ||||  ||||||| ||||||| |||||| | | ||||||||||||||||    
T  23231680 ggtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatcattcggtgtattatacgcagccttaccttatattttacacaagaggct 23231585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 162 - 244
Target Start/End: Complemental strand, 6736969 - 6736888
Alignment:
Q  162 ccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||| |||||||||| ||||||||||| || |||||| |||||||| |||||  | || ||||||  |||||||||||    
T  6736969 ccaccatttggtgtattgtatgcagtcttaccttg-tttttatacaagaggttgttttgaggacttgaacccgtgacctttca 6736888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 142
Target Start/End: Complemental strand, 36602581 - 36602547
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacg 142  Q
    |||||||||| ||||||||||||||||||||||||    
T  36602581 aagggcaacccggtgcactaaagctcccgcatacg 36602547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 160 - 244
Target Start/End: Original strand, 32233188 - 32233271
Alignment:
Q  160 tcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||| ||||| | ||||| | ||||||||| ||||||||||||||| ||||| || || ||||||   ||||||||||    
T  32233188 tcccaccatttggtgtaatatacgctgccttaccctg-tttttacacaagaggttgtttccaggacttgaacccatgacctttca 32233271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 122 - 199
Target Start/End: Complemental strand, 33500635 - 33500556
Alignment:
Q  122 gcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttt 199  Q
    ||||| ||| ||||||||||| | || | | ||| ||||||||||||||   |||||| |||||||||||||||||||||    
T  33500635 gcactgaagatcccgcatacgcagggtccgggaaggggtcccaccattttttgtgtatagtacgcagtcttaccctgttt 33500556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 74; Significance: 5e-34; HSPs: 52)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 108 - 241
Target Start/End: Complemental strand, 36720930 - 36720797
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| |||||||||||||| ||||||||| | || | | ||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  36720930 aagggcaaccgggtgcactaaagcttccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacaca 36720831  T
Q  208 agaggctgtttacacgatttgaacttgtgacctt 241  Q
    ||||||||||| || || ||||||  ||||||||    
T  36720830 agaggctgtttccaggacttgaacccgtgacctt 36720797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 108 - 241
Target Start/End: Original strand, 28817627 - 28817760
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| | |||||||||||||||||||||| | || | | ||| |||||||||||||  ||||||||||||||| ||||||||||||||||||||    
T  28817627 aagggcaacccgatgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattgggtgtattgtacgcagccttaccctgttttttacaca 28817726  T
Q  208 agaggctgtttacacgatttgaacttgtgacctt 241  Q
    ||||||||||| || || ||||||  ||||||||    
T  28817727 agaggctgtttccaggacttgaacccgtgacctt 28817760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 106 - 218
Target Start/End: Complemental strand, 45071400 - 45071289
Alignment:
Q  106 ataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||||||| |||||||| ||||||||||||||| |||| | | ||| |||||||||||||| ||||||||||||||| |||||||||| |||||||    
T  45071400 ataagggcaacccggtgcactgaagctcccgcatacgcaaggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttaca 45071302  T
Q  206 caagaggctgttt 218  Q
    |||||||||||||    
T  45071301 caagaggctgttt 45071289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 112 - 241
Target Start/End: Original strand, 29521690 - 29521819
Alignment:
Q  112 gcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagag 211  Q
    |||||| |||||||||||||||||||||||| | || ||| ||  || ||||||||||| ||||||||||||||| |||||||||||||||| |||||||    
T  29521690 gcaacccggtgcactaaagctcccgcatacgcagggtctgggatgggttcccaccatttggtgtattgtacgcagccttaccctgttttttaaacaagag 29521789  T
Q  212 gctgtttacacgatttgaacttgtgacctt 241  Q
    ||||||| || || ||||||  ||||||||    
T  29521790 gctgtttccaggacttgaacccgtgacctt 29521819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 109 - 218
Target Start/End: Complemental strand, 29877227 - 29877118
Alignment:
Q  109 agggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaa 208  Q
    |||||| ||||||||||||| ||||||||||||| | || | | ||| |||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  29877227 agggcagcctggtgcactaacgctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacacaa 29877128  T
Q  209 gaggctgttt 218  Q
     |||||||||    
T  29877127 aaggctgttt 29877118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 108 - 241
Target Start/End: Complemental strand, 44530283 - 44530150
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||| ||||| |||||||||||||||||||||||| | || |   ||| |||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  44530283 aaggtcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacaca 44530184  T
Q  208 agaggctgtttacacgatttgaacttgtgacctt 241  Q
    ||||| ||||| || || ||||||  ||||||||    
T  44530183 agaggttgtttccaagacttgaacccgtgacctt 44530150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 108 - 243
Target Start/End: Complemental strand, 2626656 - 2626518
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtt---ttttac 204  Q
    |||||||| |||||||||| ||||||||||||| | | || ||| ||| |||||||| ||||| |||||||||||||||||||||||||||   ||||||    
T  2626656 aagggcaatctggtgcactgaagctcccgcatatgcagggtctgggaaggggtcccatcatttggtgtattgtacgcagtcttaccctgtttttttttac 2626557  T
Q  205 acaagaggctgtttacacgatttgaacttgtgacctttc 243  Q
    |||||||||||||| || || ||||||  ||||||||||    
T  2626556 acaagaggctgtttccaggacttgaacccgtgacctttc 2626518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 39460995 - 39461133
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| ||||| |||||||  | ||||||||||||||| ||||| ||||||||||||    
T  39460995 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtctcaccattattggtgtattgtacgcagccttactctgttttttaca 39461094  T
Q  206 caagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||||| || || ||||||  |||||||||||    
T  39461095 caagaggctgtttccaggacttgaacccgtgacctttca 39461133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 106 - 244
Target Start/End: Complemental strand, 22598292 - 22598155
Alignment:
Q  106 ataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    ||||||||  ||||||||||||||| ||||||||||| |||| | | ||||||||| ||||| || |||||||||||  || ||||||||||||||||||    
T  22598292 ataagggctgcctggtgcactaaag-tcccgcatacgcaaggtccgggaaagggtctcaccaattggtgtattgtacatagccttaccctgttttttaca 22598194  T
Q  206 caagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||| ||||| || |||||||||  |||||||||||    
T  22598193 caagaggttgtttccaggatttgaacccgtgacctttca 22598155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 35261813 - 35261703
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| |||||||||||||||||||||||| | || |   ||| |||||||||||||| ||||||||||||||  ||||||||||||||||||||    
T  35261813 aagggcaacccggtgcactaaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattgtacgcaaccttaccctgttttttacaca 35261714  T
Q  208 agaggctgttt 218  Q
    |||| ||||||    
T  35261713 agagactgttt 35261703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 12626024 - 12625913
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtt-ttttacac 206  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||  |||||||||||||| |||||||||| |||||||||||||||| ||||||||    
T  12626024 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggagggggtcccaccatttggtgtattgtatgcagtcttaccctgtttttttacac 12625925  T
Q  207 aagaggctgttt 218  Q
    |||||| |||||    
T  12625924 aagaggttgttt 12625913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 13160835 - 13160726
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| || ||||| ||||||||||||||| | || | | ||| |||||||||||||| ||||||||||||||| |||||||||| |||||||||    
T  13160835 aagggcaacccggcgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacaca 13160737  T
Q  208 agaggctgttt 218  Q
    |||||||||||    
T  13160736 agaggctgttt 13160726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 12670251 - 12670385
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    ||||| |||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  12670251 aagggtaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 12670348  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||| || || ||||||  |||||||||||    
T  12670349 agaggctgtttccaggacttgaacccgtgacctttca 12670385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 241
Target Start/End: Complemental strand, 26954269 - 26954133
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccat--ttagtgtattgtacgcagtcttaccctg-ttttttac 204  Q
    ||||||||||  ||||||||||||||||||||| |  ||| ||| ||| ||||||||||||  || ||||||||||||||| ||||||||| ||||||||    
T  26954269 aagggcaacccagtgcactaaagctcccgcatatgcgaggtctgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttttttac 26954170  T
Q  205 acaagaggctgtttacacgatttgaacttgtgacctt 241  Q
    |||||||||||||| || || ||||||  ||||||||    
T  26954169 acaagaggctgtttccaggacttgaacccgtgacctt 26954133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 108 - 241
Target Start/End: Complemental strand, 6760958 - 6760823
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||||| |||||||||||||||||||||| |   || | | ||| |||||||||||||  | |||||||||||| || ||||||||||||||||||    
T  6760958 aagggcaacccggtgcactaaagctcccgcatatgcggggtccgagaaggggtcccaccattattggtgtattgtacgaagccttaccctgttttttaca 6760859  T
Q  206 caagaggctgtttacacgatttgaacttgtgacctt 241  Q
    ||||||||||||| || || ||||||  ||||||||    
T  6760858 caagaggctgtttccaggacttgaacccgtgacctt 6760823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 243
Target Start/End: Complemental strand, 17823710 - 17823575
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| |||||||||||||||| ||||| | | ||   | ||| |||| ||||||||| ||||||| |||||||||||| |||| ||||||||||    
T  17823710 aagggcaacccggtgcactaaagctcctgcatatgcagggttcgggaaggggttccaccatttggtgtattttacgcagtcttatcctggtttttacaca 17823611  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttc 243  Q
    ||||||||||| || || ||||||  ||||||||||    
T  17823610 agaggctgtttccaggacttgaacccgtgacctttc 17823575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 111 - 244
Target Start/End: Original strand, 18164764 - 18164896
Alignment:
Q  111 ggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaaga 210  Q
    ||||||| |||||||||||||||||||||||| | || | | |||| |||| || | ||| ||||||||||||||  ||||||||| |||||||||||||    
T  18164764 ggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaatggtcacatcctttggtgtattgtacgcaaccttaccctg-tttttacacaaga 18164862  T
Q  211 ggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||||| || || ||||||  |||||||||||    
T  18164863 ggctgtttccaggacttgaacccgtgacctttca 18164896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 30454098 - 30454232
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| |||||| |||||||| |||||| ||  |||||||||    
T  30454098 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtatcgtacgcagccttaccttg--ttttacaca 30454195  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||| || || ||||||  |||||||||||    
T  30454196 agaggctgtttccaggacttgaacccgtgacctttca 30454232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 231
Target Start/End: Complemental strand, 5689754 - 5689642
Alignment:
Q  119 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    ||||||||||||||||| |||||| | ||   | ||| |||| ||||||||| ||||||||||||||| ||||||||| ||||||||||||||||| |||    
T  5689754 ggtgcactaaagctcccacatacgcatggttcgggaaggggttccaccatttggtgtattgtacgcagccttaccctgctttttacacaagaggctattt 5689655  T
Q  219 acacgatttgaac 231  Q
    ||| || ||||||    
T  5689654 acaagacttgaac 5689642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 119 - 231
Target Start/End: Original strand, 8483950 - 8484062
Alignment:
Q  119 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    ||||| |||||||||||||||||| | || ||| ||  ||||||||||| || ||||||||||||||| ||| ||||||||||||||||||||| |||||    
T  8483950 ggtgccctaaagctcccgcatacgcagggtctgggatggggtcccaccaattggtgtattgtacgcagccttgccctgttttttacacaagaggttgttt 8484049  T
Q  219 acacgatttgaac 231  Q
     || || ||||||    
T  8484050 ccaggacttgaac 8484062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 5135291 - 5135413
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    ||||||| || ||||||| |||||||| ||||||| | || | | ||| |||||||||||||| ||||||||||| ||| |||||||| |||||||||||    
T  5135291 aagggcagcccggtgcac-aaagctcctgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctcttttttacaca 5135389  T
Q  208 agaggctgtttacacgatttgaac 231  Q
    ||||||||||| || || ||||||    
T  5135390 agaggctgtttccaggacttgaac 5135413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 10857963 - 10857852
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctg-ttttttacac 206  Q
    |||||||||| |||||||||||||||||||||||| |||| |   |||  |||||||||| || ||||||||| ||||| ||||||||| ||||||||||    
T  10857963 aagggcaacccggtgcactaaagctcccgcatacgcaaggtccaggaagtggtcccaccaattggtgtattgtgcgcagccttaccctgtttttttacac 10857864  T
Q  207 aagaggctgttt 218  Q
    ||||||| ||||    
T  10857863 aagaggcggttt 10857852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 108 - 218
Target Start/End: Original strand, 8897765 - 8897875
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| |||||| ||||||||||||||| | | || | | ||| |||||||||||||| |||||||||||| || |||||||| |||||||||||    
T  8897765 aagggcaaccgggtgcagtaaagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgtagccttaccctattttttacaca 8897864  T
Q  208 agaggctgttt 218  Q
    || || |||||    
T  8897865 agcggttgttt 8897875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 99 - 218
Target Start/End: Complemental strand, 20870068 - 20869947
Alignment:
Q  99 aaaaacaataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctg 196  Q
    ||||| || |||||||||| |||||||||||||||||||||| |   || |   ||| |||||||||||||  | ||||||||||||||| |||||||||    
T  20870068 aaaaaaaaaaagggcaacccggtgcactaaagctcccgcatatgcggggtcctggaaggggtcccaccattattggtgtattgtacgcagccttaccctg 20869969  T
Q  197 ttttttacacaagaggctgttt 218  Q
    ||||||||||||||| ||||||    
T  20869968 ttttttacacaagagactgttt 20869947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 158 - 244
Target Start/End: Original strand, 14018019 - 14018106
Alignment:
Q  158 ggtcccacca-tttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||| |||||| || || ||||||   ||||||||||    
T  14018019 ggtcccaccaatttagtgtattgtacgcagtctcaccctgttttttacacaagagactgtttccaagacttgaacccatgacctttca 14018106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 216
Target Start/End: Complemental strand, 16225155 - 16225045
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||| ||||| |||||||||||||||||||||| |   || | | ||| || ||||||||||  | ||||||||||||||||||||||||||||||||||    
T  16225155 aaggacaacccggtgcactaaagctcccgcatatgcggggtccgggaagggatcccaccattattggtgtattgtacgcagtcttaccctgttttttaca 16225056  T
Q  206 caagaggctgt 216  Q
     ||||||||||    
T  16225055 taagaggctgt 16225045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 7136528 - 7136653
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    ||||| |||| |||||||||||||||||||||| |   || | | ||| |||||||||||||  | ||||||||||||||| ||||||||| ||||||||    
T  7136528 aagggtaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctggtttttaca 7136627  T
Q  206 caagaggctgtttacacgatttgaac 231  Q
    ||||||| ||||| || || ||||||    
T  7136628 caagaggttgtttccaggacttgaac 7136653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 113 - 244
Target Start/End: Original strand, 20284075 - 20284210
Alignment:
Q  113 caacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccat--ttagtgtattgtacgcagtcttaccc--tgttttttacacaa 208  Q
    ||||| ||||||||||| |||||||||||| | || | | ||| ||||||||||||  || ||||||||||||||| |||||||  | ||||||| ||||    
T  20284075 caacccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttacccttttttttttatacaa 20284174  T
Q  209 gaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||||||| || || ||||||  |||||||||||    
T  20284175 gaggctgtttccaggacttgaacccgtgacctttca 20284210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 127 - 218
Target Start/End: Original strand, 24365079 - 24365171
Alignment:
Q  127 aaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctg-ttttttacacaagaggctgttt 218  Q
    ||||||||| |||||| | || | | ||| |||||||||||||| ||||||||| ||||| ||||||||| ||||||||||||||||||||||    
T  24365079 aaagctcccacatacgcagggtccgggaaggggtcccaccatttggtgtattgttcgcagccttaccctgattttttacacaagaggctgttt 24365171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 241
Target Start/End: Complemental strand, 25250658 - 25250523
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||||| ||||||||||| |||||||||| |   ||   | ||| |||||||||||||  | ||||||||||||||| | |||||| |||||||||    
T  25250658 aagggcaacccggtgcactaaatctcccgcatatgcggggttcgggaaggggtcccaccattattggtgtattgtacgcagccataccctattttttaca 25250559  T
Q  206 caagaggctgtttacacgatttgaacttgtgacctt 241  Q
    ||| ||||||||| || || |||||| |||||||||    
T  25250558 caataggctgtttccaggacttgaacatgtgacctt 25250523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 31457306 - 31457171
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||| | ||||||||| |||||||||||||| | ||  || ||| |||||| |||||||  |||||||||||||| |||  |||  ||||||||||    
T  31457306 aagggcaatccggtgcactagagctcccgcatacgcagggtttgggaaggggtcctaccatttgatgtattgtacgcagccttttcct-atttttacaca 31457208  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||| |||||||| || ||||||  |||||||||||    
T  31457207 agaggttgtttacaggacttgaacccgtgacctttca 31457171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 113 - 244
Target Start/End: Original strand, 21070703 - 21070839
Alignment:
Q  113 caacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccat--ttagtgtattgtacgcagtcttaccc---tgttttttacaca 207  Q
    ||||| ||||||||||| |||||||||||| | || | | ||| ||||||||||||  || ||||||||||||||| |||||||   | ||||||| |||    
T  21070703 caacccggtgcactaaaactcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctttttttttttataca 21070802  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||| || || ||||||  |||||||||||    
T  21070803 agaggctgtttccaggacttgaacccgtgacctttca 21070839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 120 - 244
Target Start/End: Original strand, 44781517 - 44781643
Alignment:
Q  120 gtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttacacaagaggctgtt 217  Q
    ||||||||||||||||||||||| | || ||| ||  |||||||| |||||   ||||||||||| ||| |||||||||| |||||||||||||| ||||    
T  44781517 gtgcactaaagctcccgcatacgcagggtctgggacggggtcccaacatttttggtgtattgtacacagccttaccctgtcttttacacaagaggttgtt 44781616  T
Q  218 tacacgatttgaacttgtgacctttca 244  Q
    | || || ||||||  |||| ||||||    
T  44781617 tccaggacttgaacccgtgaactttca 44781643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 110 - 207
Target Start/End: Original strand, 44742521 - 44742619
Alignment:
Q  110 gggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacaca 207  Q
    ||||| || |||||||||| |||||||||| |||| || |   ||| |||||||||||||| | |||||||||||||| ||||||||||||||||||||    
T  44742521 gggcaccccggtgcactaatgctcccgcatccgtagggtccaagaaggggtcccaccattttggtgtattgtacgcagccttaccctgttttttacaca 44742619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 243
Target Start/End: Complemental strand, 389768 - 389642
Alignment:
Q  119 ggtgcactaaagctcccgcatacgtaagggctgcgaaaggg-tcccaccatttagtgtattgtacgcagtcttaccctgtttttt--acacaagaggctg 215  Q
    ||||||||||||||| |||||||| | || | | ||||||| ||||| ||||| ||||||||||||||  |||||||||||||||  |||||||||| ||    
T  389768 ggtgcactaaagctctcgcatacgcagggtcag-gaaagggatcccatcatttggtgtattgtacgcaaccttaccctgtttttttgacacaagagggtg 389670  T
Q  216 tttacacgatttgaacttgtgacctttc 243  Q
    ||| || || ||||||  ||||||||||    
T  389669 tttccaggacttgaacccgtgacctttc 389642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 120 - 215
Target Start/End: Original strand, 17250888 - 17250985
Alignment:
Q  120 gtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttacacaagaggctg 215  Q
    |||||||||||||||  |||||| | ||   | |||||||||||||||||  | ||||||||||||| | |||| |||||||||||||||||||||||    
T  17250888 gtgcactaaagctccttcatacgcagggttcgggaaagggtcccaccattattggtgtattgtacgctgccttaacctgttttttacacaagaggctg 17250985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 156 - 216
Target Start/End: Original strand, 23286374 - 23286432
Alignment:
Q  156 agggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgt 216  Q
    ||||||||||||||| |||||||||||||||  ||||||||  ||||||||||||||||||    
T  23286374 agggtcccaccatttggtgtattgtacgcagctttaccctg--ttttacacaagaggctgt 23286432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 119 - 208
Target Start/End: Original strand, 40604918 - 40605006
Alignment:
Q  119 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaa 208  Q
    ||||||||||||||||||||||||| |||| | || |||||  ||| ||||||||||||||||||||  |||| ||  ||||||||||||    
T  40604918 ggtgcactaaagctcccgcatacgt-agggtttcggaagggatccatcatttagtgtattgtacgcaaccttatccaattttttacacaa 40605006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 157 - 218
Target Start/End: Complemental strand, 43942411 - 43942348
Alignment:
Q  157 gggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    ||||||||||||||   ||||||||||||||| |||||||||||||| ||| ||||||||||||    
T  43942411 gggtcccaccatttttggtgtattgtacgcagccttaccctgtttttgacataagaggctgttt 43942348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 244
Target Start/End: Complemental strand, 35106008 - 35105921
Alignment:
Q  158 ggtcccaccatt-tagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||||||||| | ||||||||||||||| ||||| || | |||||||||||||| ||||| || || ||||||  |||||||||||    
T  35106008 ggtcccaccattctggtgtattgtacgcagccttacactctcttttacacaagaggttgtttccaggacttgaacccgtgacctttca 35105921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 170
Target Start/End: Complemental strand, 28407537 - 28407475
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattt 170  Q
    |||||||||| |||||| ||||||||||||||||||| || | | ||| ||||||||||||||    
T  28407537 aagggcaacccggtgcagtaaagctcccgcatacgtagggtccgggaaggggtcccaccattt 28407475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 175 - 244
Target Start/End: Complemental strand, 11748366 - 11748297
Alignment:
Q  175 tattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||||||| ||||||||||| |||||||| |||||||||||| || || ||||||  ||||| |||||    
T  11748366 tattgtacgctgtcttaccctgctttttacaaaagaggctgtttccaagacttgaacccgtgacatttca 11748297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 172 - 244
Target Start/End: Original strand, 20869563 - 20869633
Alignment:
Q  172 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||| ||| |||||||||||||  |||||||||||||||| || || ||||||  |||||||||||    
T  20869563 gtgtattgtacacagccttaccctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttca 20869633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 181
Target Start/End: Complemental strand, 26102651 - 26102578
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgta 181  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||    
T  26102651 aagggcaacccggtgcactagagctcccgcataagcagggtccgggaaggggtcccaccatttggtgtattgta 26102578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 108 - 185
Target Start/End: Complemental strand, 16013590 - 16013511
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca--tttagtgtattgtacgca 185  Q
    |||| ||||| |||||||||||||||||||||| | | || ||| ||| ||||| |||||  ||||||||||||||||||    
T  16013590 aaggacaacccggtgcactaaagctcccgcataggcagggtctgggaaggggtcgcaccatttttagtgtattgtacgca 16013511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 120 - 200
Target Start/End: Complemental strand, 19729462 - 19729382
Alignment:
Q  120 gtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtttt 200  Q
    |||||||| |||||||| ||| | | || | | ||| |||||||||||||| ||||||||||| ||| |||||||||||||    
T  19729462 gtgcactagagctcccgtatatgcagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctgtttt 19729382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 30962847 - 30962910
Alignment:
Q  181 acgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||| || ||||| |||||||||||||||||||||| || || ||||| | |||||||||||    
T  30962847 acgcagcctaaccctattttttacacaagaggctgtttccaggacttgaagtcgtgacctttca 30962910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 218
Target Start/End: Original strand, 23000229 - 23000329
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| ||||||||||||||||||||| ||          ||| |||||||||||||| |||||||||| | |  |||||| || ||||||||||    
T  23000229 aagggcaacccggtgcactaaagctcccgcatccgg---------gaaggggtcccaccatttggtgtattgtatggaaccttaccgtg-tttttacaca 23000318  T
Q  208 agaggctgttt 218  Q
    |||||||||||    
T  23000319 agaggctgttt 23000329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 142
Target Start/End: Original strand, 27468093 - 27468127
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacg 142  Q
    |||||||||| ||||||||||||||||||||||||    
T  27468093 aagggcaacccggtgcactaaagctcccgcatacg 27468127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 167 - 244
Target Start/End: Complemental strand, 36918199 - 36918122
Alignment:
Q  167 atttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||| ||||||||||| ||| |||||||||||||||||| ||||   ||||| ||  | |||||| ||||||||||||    
T  36918199 atttggtgtattgtacacagccttaccctgttttttacataagaaattgtttccagaacttgaacatgtgacctttca 36918122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 106 - 142
Target Start/End: Complemental strand, 27508046 - 27508010
Alignment:
Q  106 ataagggcaacctggtgcactaaagctcccgcatacg 142  Q
    |||||| ||||| ||||||||||||||||||||||||    
T  27508046 ataaggacaacccggtgcactaaagctcccgcatacg 27508010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 42083748 - 42083836
Alignment:
Q  157 gggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||||||||||| | | || ||||||||| ||| |||  |||||||||||| ||||||||| || || ||||||  |||||||||||    
T  42083748 gggtcccaccattttggtatactgtacgcagccttgccccattttttacacaaaaggctgtttccaggacttgaacccgtgacctttca 42083836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 70; Significance: 1e-31; HSPs: 54)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 108 - 241
Target Start/End: Original strand, 8455317 - 8455450
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| |||||||||||||||| ||||||| | || | | ||| |||||||||||||| ||||||||||||||| |||||||||| |||||||||    
T  8455317 aagggcaacccggtgcactaaagctccggcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtgttttacaca 8455416  T
Q  208 agaggctgtttacacgatttgaacttgtgacctt 241  Q
    ||||||||||| || || ||||||  ||||||||    
T  8455417 agaggctgtttccaggacttgaacccgtgacctt 8455450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 108 - 231
Target Start/End: Complemental strand, 9671313 - 9671192
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  9671313 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 9671216  T
Q  208 agaggctgtttacacgatttgaac 231  Q
    ||||||||||| || |||||||||    
T  9671215 agaggctgtttccaggatttgaac 9671192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 116 - 244
Target Start/End: Original strand, 32781298 - 32781425
Alignment:
Q  116 cctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctg 215  Q
    |||||||||| |||||||||||||||  | || ||| ||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||    
T  32781298 cctggtgcac-aaagctcccgcatacacagggtctgggaaggggtcccaccatttggtgtattgtacgcagtcttaccctgttttttacacaagaggttg 32781396  T
Q  216 tttacacgatttgaacttgtgacctttca 244  Q
    ||| |  || ||||||| |||||||||||    
T  32781397 tttccgagacttgaactcgtgacctttca 32781425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 10543834 - 10543696
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| ||||||||||||||   ||||||||||||||| ||||||||||||||||||    
T  10543834 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgttttttaca 10543735  T
Q  206 caagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||||| |||| || || ||||||  |||||||||||    
T  10543734 caagaggccgtttccaggacttgaacccgtgacctttca 10543696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 10546297 - 10546160
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtt-ttttacac 206  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||| ||||||||||||||| ||||||||||| ||||| ||    
T  10546297 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtttttttatac 10546198  T
Q  207 aagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||| ||||| || || ||||||  |||||||||||    
T  10546197 aagaggatgtttccaggacttgaacccgtgacctttca 10546160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 108 - 241
Target Start/End: Complemental strand, 11514569 - 11514437
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||| | |||||||||||||||||||||||| | || ||| ||| |||||||||||||| ||||||||||||||| |||||  |||||||||||||    
T  11514569 aagggcaatccggtgcactaaagctcccgcatacgcagggtctgggaa-gggtcccaccatttggtgtattgtacgcagccttactttgttttttacaca 11514471  T
Q  208 agaggctgtttacacgatttgaacttgtgacctt 241  Q
    ||||||||||| || || ||||||  ||||||||    
T  11514470 agaggctgtttccaggagttgaacccgtgacctt 11514437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 108 - 241
Target Start/End: Complemental strand, 14444862 - 14444730
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    ||||||||||||||||||||||||||||||||||| | || | | ||| |||||||||||||| |||||| |||| ||| |||||||||| |||||||||    
T  14444862 aagggcaacctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtatcgtacacagccttaccctgt-ttttacaca 14444764  T
Q  208 agaggctgtttacacgatttgaacttgtgacctt 241  Q
    ||||||||||| || || ||||||  ||||||||    
T  14444763 agaggctgtttccaggacttgaacccgtgacctt 14444730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 14530454 - 14530316
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||  | |||||||||||| || |||||||||||||||| |    
T  14530454 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgtagccttaccctgttttttata 14530355  T
Q  206 caagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||||| || || ||||||  |||||||||||    
T  14530354 caagaggctgtttccaggacttgaacccgtgacctttca 14530316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 108 - 218
Target Start/End: Original strand, 40762235 - 40762345
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| ||||||||||||||||| |||||| | || |   |||||||||||||||||| |||||||||||| || ||||||| ||||||||||||    
T  40762235 aagggcaacccggtgcactaaagctcccacatacgcagggtccaggaaagggtcccaccatttggtgtattgtacgtagccttacccagttttttacaca 40762334  T
Q  208 agaggctgttt 218  Q
    |||||||||||    
T  40762335 agaggctgttt 40762345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 36871625 - 36871517
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||| ||||||||||||||| ||||||||| |||| |||||    
T  36871625 aagggcaacccggtgcactaaagctcccgcatacgca-ggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg-ttttcacaca 36871528  T
Q  208 agaggctgttt 218  Q
    |||||||||||    
T  36871527 agaggctgttt 36871517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 25632643 - 25632544
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| |||||||||||||||||||||||||||||   | ||| |  ||||||||||| ||||||||||||||| |||| |||||||||||||||    
T  25632643 aagggcaacccggtgcactaaagctcccgcatacgtaaggttcgggaaggaatcccaccatttggtgtattgtacgcagccttatcctgttttttacaca 25632544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 21779262 - 21779396
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||  |||||||||  |||||||||    
T  21779262 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg--ttttacaca 21779359  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||| | || || ||||||  |||||||||||    
T  21779360 agaggctgtctccaggacttgaacccgtgacctttca 21779396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 23397898 - 23397764
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| ||||||||| |||||||||||| ||| || | | ||| |||||||||||||| |||||||||||| || |||||||  | |||||||||    
T  23397898 aagggcaacccggtgcactagagctcccgcatatgtagggtccgagaaggggtcccaccatttggtgtattgtacgtagccttaccc--tattttacaca 23397801  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||| || || ||||||   ||||||||||    
T  23397800 agaggctgtttccaggacttgaacccatgacctttca 23397764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 12023969 - 12024055
Alignment:
Q  157 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||| || || ||||||  |||||||||||    
T  12023969 gggtcccaccatttggtgtattgtacgcagccttaccctg-tttttacacaagaggctgtttccaggacttgaacccgtgacctttca 12024055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 153 - 244
Target Start/End: Original strand, 23145744 - 23145835
Alignment:
Q  153 gaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||||||| || ||||||||||||||| ||||| |||||||||||||||||| |||||| || || ||||||  |||||||||||    
T  23145744 gaaagggtcccaccaattggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttca 23145835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 153 - 244
Target Start/End: Original strand, 23557534 - 23557625
Alignment:
Q  153 gaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||||||| || ||||||||||||||| ||||| |||||||||||||||||| |||||| || || ||||||  |||||||||||    
T  23557534 gaaagggtcccaccaattggtgtattgtacgcagccttacactgttttttacacaagagtctgttttcaagacttgaacccgtgacctttca 23557625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 24200624 - 24200762
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||||| ||||||||||||||| | |||||  | || | | ||| || |||||||||||   ||||||||||||||| ||||||||||||||||||    
T  24200624 aagggcaacccggtgcactaaagctctcacatactcagggtccgggaagggttcccaccatttttggtgtattgtacgcagccttaccctgttttttaca 24200723  T
Q  206 caagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||||| || || ||||||  ||||| |||||    
T  24200724 caagaggctgtttccaggacttgaacccgtgacttttca 24200762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 99 - 241
Target Start/End: Original strand, 25249730 - 25249871
Alignment:
Q  99 aaaaacaataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtt 198  Q
    ||||| || |||||||||| ||||||||||||||| |||||||| | ||   | ||| || ||||||||||| ||||||||||||||| ||||||||| |    
T  25249730 aaaaaaaaaaagggcaacccggtgcactaaagctcacgcatacgcagggttcgggaagggatcccaccatttggtgtattgtacgcagccttaccctg-t 25249828  T
Q  199 ttttacacaagaggctgtttacacgatttgaacttgtgacctt 241  Q
    || |||||||||| |||||| || || ||||||  ||||||||    
T  25249829 ttgtacacaagagactgtttccatgacttgaacccgtgacctt 25249871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 30826169 - 30826061
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||| ||| |||||||||||||||||||||||| ||| || ||| ||| |||| ||||||||| ||||||||||||||  ||||||||  ||||||||||    
T  30826169 aaggacaatctggtgcactaaagctcccgcatatgtagggtctgggaa-gggttccaccatttggtgtattgtacgcaaccttaccct-atttttacaca 30826072  T
Q  208 agaggctgttt 218  Q
    |||||||||||    
T  30826071 agaggctgttt 30826061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 241
Target Start/End: Complemental strand, 17668136 - 17668003
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| |||||||||||||||||  ||||| | ||   | ||| |||| ||||||||| ||||||||||||||| ||||||||| ||||||||||    
T  17668136 aagggcaacccggtgcactaaagctcccatatacgcagggttcgagaaggggttccaccatttggtgtattgtacgcagccttaccctgatttttacaca 17668037  T
Q  208 agaggctgtttacacgatttgaacttgtgacctt 241  Q
    ||||| | ||| || || ||||||  ||||||||    
T  17668036 agaggttctttccaggacttgaacccgtgacctt 17668003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 243
Target Start/End: Original strand, 19977715 - 19977850
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    ||||| || |||||||||||||||||||||||||  ||||   | ||| || ||||||||||| ||||||||||||||  |||| ||| ||||||||| |    
T  19977715 aagggtaatctggtgcactaaagctcccgcatacacaaggttcgggaagggatcccaccatttggtgtattgtacgcaaccttatcctattttttacaaa 19977814  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttc 243  Q
    ||||||||||| ||  | ||||||  ||||||||||    
T  19977815 agaggctgtttccagaacttgaacccgtgacctttc 19977850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 14544200 - 14544087
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtg--tattgtacgcagtcttaccctgttttt-tac 204  Q
    ||||||||| ||||||||||||||||||||||||| | || |   ||| |||||| |||||||  ||  ||||| ||||||||||||||||||||| |||    
T  14544200 aagggcaacttggtgcactaaagctcccgcatacgcagggtcccggaaggggtccgaccattttttggttattgcacgcagtcttaccctgtttttctac 14544101  T
Q  205 acaagaggctgttt 218  Q
    ||||||||||||||    
T  14544100 acaagaggctgttt 14544087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 119 - 218
Target Start/End: Original strand, 31158451 - 31158552
Alignment:
Q  119 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttacacaagaggctgt 216  Q
    |||| ||||||||||||||||||| | || ||| ||| ||||||||||||||   || ||||||| ||| |||||||||||||||||| |||||||||||    
T  31158451 ggtgtactaaagctcccgcatacgcagggtctgggaaggggtcccaccatttttggtttattgtatgcaatcttaccctgttttttacgcaagaggctgt 31158550  T
Q  217 tt 218  Q
    ||    
T  31158551 tt 31158552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 110 - 218
Target Start/End: Original strand, 4516354 - 4516462
Alignment:
Q  110 gggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaag 209  Q
    ||||| || ||| |||||||||| || |||||| | || | | ||| ||||||||||| || |||||||||||||||  || ||||||||||||||||||    
T  4516354 gggcagcccggtacactaaagcttccacatacgcagggtccgggaaggggtcccaccaattggtgtattgtacgcagcgttgccctgttttttacacaag 4516453  T
Q  210 aggctgttt 218  Q
    |||||||||    
T  4516454 aggctgttt 4516462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 17896394 - 17896283
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccct-gttttttacac 206  Q
    |||||||||  | ||||||||||||||| |||||| | || | | ||| |||||||||||||| || |||||||||||| ||||||||  ||||||||||    
T  17896394 aagggcaactcgatgcactaaagctcccacatacgcagggtccgagaaggggtcccaccatttggtatattgtacgcagccttaccctatttttttacac 17896295  T
Q  207 aagaggctgttt 218  Q
    |||||| |||||    
T  17896294 aagaggttgttt 17896283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 21377123 - 21377210
Alignment:
Q  157 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||||||||||| ||| ||||||| ||| ||||||||||||||||||||||||| |||||  | || ||||||| || ||||||||    
T  21377123 gggtcccaccatttggtgcattgtacccagccttaccctgttttttacacaagaggatgtttctatgacttgaactcgtaacctttca 21377210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 218
Target Start/End: Original strand, 25079718 - 25079829
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctg-ttttttacac 206  Q
    |||||||||| |||||||||||||||  ||||||| | || | | ||| |||||||||||||  ||||||||||||||  |||||| || ||||||||||    
T  25079718 aagggcaacccggtgcactaaagctcttgcatacgcagggtccgggaaggggtcccaccattcggtgtattgtacgcatccttaccttgtttttttacac 25079817  T
Q  207 aagaggctgttt 218  Q
    |||||| |||||    
T  25079818 aagaggttgttt 25079829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 218
Target Start/End: Original strand, 39914307 - 39914417
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctg-ttttttacac 206  Q
    |||||||||| | |||||||||||||||||||||| | || | | ||| |||||||||||||  ||||||||||| ||  ||||||||| ||||||||||    
T  39914307 aagggcaacccgatgcactaaagctcccgcatacgcagggtcag-gaaggggtcccaccattcggtgtattgtacacatccttaccctgtttttttacac 39914405  T
Q  207 aagaggctgttt 218  Q
    |||||| |||||    
T  39914406 aagaggttgttt 39914417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 123 - 244
Target Start/End: Original strand, 99281 - 99400
Alignment:
Q  123 cactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacac 222  Q
    |||||||||||||||||||  | || ||| ||| |||| ||||||||| ||||||||||||||| ||| || ||||||||  ||||||||||||||  |     
T  99281 cactaaagctcccgcatacacagggtctgagaaggggttccaccatttggtgtattgtacgcagccttgccatgtttttt--acaagaggctgtttctag 99378  T
Q  223 gatttgaacttgtgacctttca 244  Q
    || ||||||  |||||||||||    
T  99379 gacttgaacccgtgacctttca 99400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 17623698 - 17623588
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    ||||||||||  ||||||||||||| || |||||| | |    | ||| |||| ||||||||| ||||||||||||||| ||||||||| ||||||||||    
T  17623698 aagggcaacccagtgcactaaagcttccacatacgcaggattcgggaaggggttccaccatttggtgtattgtacgcagccttaccctgatttttacaca 17623599  T
Q  208 agaggctgttt 218  Q
    ||||| |||||    
T  17623598 agaggttgttt 17623588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 202
Target Start/End: Complemental strand, 44643657 - 44643563
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtttttt 202  Q
    ||||||| || |||||||||| ||||||||||||| | || ||| ||| |||||||||||||| ||  ||||||||||| ||||| |||||||||    
T  44643657 aagggcagcccggtgcactaaggctcccgcatacgcagggtctgggaaggggtcccaccatttggtacattgtacgcagccttactctgtttttt 44643563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 217
Target Start/End: Complemental strand, 27573754 - 27573646
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| | ||||||||||||||| |||||  | ||  || |||| ||| ||||||||| ||||||||||||||| |||||| || ||| ||||||    
T  27573754 aagggcaacccgatgcactaaagctcccacatacacagggtttgggaaatggttccaccatttggtgtattgtacgcagccttaccatg-tttatacaca 27573656  T
Q  208 agaggctgtt 217  Q
    ||||||||||    
T  27573655 agaggctgtt 27573646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 241
Target Start/End: Original strand, 40416872 - 40417005
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| ||||||||||||||| |||||| | | || |    ||||||||||| || || ||||||||||| ||| ||| |||||||||||| |||    
T  40416872 aagggcaacccggtgcactaaagctctcgcatatgcagggtccaaaaaagggtcccatcaattggtgtattgtacacagcctttccctgttttttataca 40416971  T
Q  208 agaggctgtttacacgatttgaacttgtgacctt 241  Q
    ||||| ||||| || || ||||||  ||||||||    
T  40416972 agaggttgtttccatgacttgaacccgtgacctt 40417005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 157 - 244
Target Start/End: Complemental strand, 5450371 - 5450283
Alignment:
Q  157 gggtcccaccatttagtgtattgtacgcagtcttaccctg-ttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||||||| ||| ||||||||||||||| |||||| || |||||||||||||||| ||||| || || ||||||  |||||||||||    
T  5450371 gggtcccaccctttggtgtattgtacgcagccttaccatgtttttttacacaagaggttgtttccaggaattgaacccgtgacctttca 5450283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 111 - 244
Target Start/End: Complemental strand, 7214667 - 7214532
Alignment:
Q  111 ggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttacacaa 208  Q
    ||||||||||||||||||| ||| |||||||| |  | | | ||| || || ||||||||   ||||||||||||||| |||||||||| ||||||||||    
T  7214667 ggcaacctggtgcactaaaactctcgcatacgcagtgtccgagaagggatctcaccattttttgtgtattgtacgcagccttaccctgtattttacacaa 7214568  T
Q  209 gaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||| |||||| || || ||||||   ||||||||||    
T  7214567 gagactgtttccaagacttgaacccatgacctttca 7214532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 110 - 244
Target Start/End: Original strand, 45235820 - 45235955
Alignment:
Q  110 gggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtt-ttttacacaa 208  Q
    ||||||| |||| |||||||||||| ||||||||| || |||  || |||||||||||||| |||||||  ||| || |||||||| || ||||||| ||    
T  45235820 gggcaacttggtacactaaagctcctgcatacgtagggtctggtaaggggtcccaccattttgtgtattacacgtagccttaccctattattttacagaa 45235919  T
Q  209 gaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||| ||||||  | || ||||||| |||| ||||||    
T  45235920 gagactgtttctaggacttgaactcgtgatctttca 45235955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 126 - 244
Target Start/End: Original strand, 44521392 - 44521510
Alignment:
Q  126 taaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgat 225  Q
    ||||||||||| ||| | || | ||| ||| || |||| |||||| ||||||| || |||| |||||| |||||||||||||||||  ||||| || |||    
T  44521392 taaagctcccgtatatgcaatgtctgggaagggctcccgccatttggtgtattatatgcagccttaccttgttttttacacaagagattgtttccaagat 44521491  T
Q  226 ttgaacttgtgacctttca 244  Q
    ||||||  |||||||||||    
T  44521492 ttgaacgcgtgacctttca 44521510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 5841164 - 5841052
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||||  |||||||||||||||||||||| |   || | | ||| |||||||||||||  |  |||||||||||||  |||||||| |||||||||    
T  5841164 aagggcaactcggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattgatgtattgtacgcatccttaccctattttttaca 5841065  T
Q  206 caagaggctgttt 218  Q
    ||| |||||||||    
T  5841064 caaaaggctgttt 5841052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 175 - 244
Target Start/End: Complemental strand, 19615059 - 19614990
Alignment:
Q  175 tattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||||||||||||||||||||| |||||||| |||||  | || ||||||  |||||||||||    
T  19615059 tattgtacgcagtcttaccctgttttttatacaagaggatgtttcaaggacttgaacccgtgacctttca 19614990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 157 - 240
Target Start/End: Complemental strand, 22371139 - 22371059
Alignment:
Q  157 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacct 240  Q
    |||||||||||||| ||||||||||||||| ||||||||||||||   ||| |||||||||| || || ||||||  |||||||    
T  22371139 gggtcccaccatttggtgtattgtacgcagccttaccctgttttt---acacgaggctgtttccaggacttgaacccgtgacct 22371059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 167 - 243
Target Start/End: Original strand, 12315712 - 12315787
Alignment:
Q  167 atttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttc 243  Q
    |||| ||||||||||| |||||||||||||||||||| | |||| ||||||| || || ||||||| ||||||||||    
T  12315712 atttggtgtattgtacacagtcttaccctgtttttta-ataagaagctgtttccatgacttgaactcgtgacctttc 12315787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 188 - 244
Target Start/End: Original strand, 29419970 - 29420026
Alignment:
Q  188 cttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||||||||||||||||| ||||| || || ||||||| |||||||||||    
T  29419970 cttaccctgttttttacacaagaggttgtttccaggacttgaactcgtgacctttca 29420026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 119 - 244
Target Start/End: Original strand, 26684632 - 26684759
Alignment:
Q  119 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccct-gttttttacacaagagg-ctgt 216  Q
    |||||| ||||||||||||||||| | ||   | |||  |||||||||||||||| |||||||||||| |||||| |  |||||||||||||||| ||||    
T  26684632 ggtgcattaaagctcccgcatacgcagggttcgggaagaggtcccaccatttagtatattgtacgcagccttaccatatttttttacacaagaggtctgt 26684731  T
Q  217 ttacacgatttgaacttgtgacctttca 244  Q
    || || || || ||| | ||||||||||    
T  26684732 tttcaggacttaaacctttgacctttca 26684759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 120 - 202
Target Start/End: Complemental strand, 24890533 - 24890451
Alignment:
Q  120 gtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtttttt 202  Q
    ||||||||||||||| ||||||| | || | | ||| ||||||||||| || |||||||||| |||| |||||| ||||||||    
T  24890533 gtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccaattggtgtattgtatgcagccttaccttgtttttt 24890451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 127 - 244
Target Start/End: Complemental strand, 33795400 - 33795283
Alignment:
Q  127 aaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtatt-gtacgcagtcttaccctgttttttacacaagaggctgtttacacgat 225  Q
    |||||||||||||||  | || ||| ||| ||||||||||||   ||||||| |||||||| ||||||||||||||||| ||||||| ||||| |  ||     
T  33795400 aaagctcccgcatacacagggtctgggaaggggtcccaccatag-gtgtatttgtacgcagccttaccctgttttttacccaagaggttgtttccgggac 33795302  T
Q  226 ttgaacttgtgacctttca 244  Q
    ||||||  |||||||||||    
T  33795301 ttgaacccgtgacctttca 33795283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 193
Target Start/End: Original strand, 13245096 - 13245181
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttacc 193  Q
    |||||||||| | | |||||||||||||| ||| | | || | | ||| |||||||||||||||||||| ||||||||| ||||||    
T  13245096 aagggcaacccgatacactaaagctcccgtatatgcatggtccgggaaggggtcccaccatttagtgtaatgtacgcagccttacc 13245181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 119 - 218
Target Start/End: Complemental strand, 17471673 - 17471572
Alignment:
Q  119 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctg-ttttttacacaagaggctgt 216  Q
    ||||||||||| |||||||||| | | || | | ||| ||||| || ||||| | | ||||||||||||||||| |||| ||||||||||||||||||||    
T  17471673 ggtgcactaaaactcccgcataggcagggtcagggaaggggtctcatcattttggtatattgtacgcagtcttatcctgtttttttacacaagaggctgt 17471574  T
Q  217 tt 218  Q
    ||    
T  17471573 tt 17471572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 31821393 - 31821478
Alignment:
Q  157 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||||| ||||| ||||||||||| ||  |||||||| |||||||||||   ||||||||  |||| ||||||| |||||||||||    
T  31821393 gggtcccatcatttggtgtattgtacacaaccttaccctattttttacaca--cggctgtttctacgacttgaactcgtgacctttca 31821478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 105 - 141
Target Start/End: Original strand, 40579747 - 40579783
Alignment:
Q  105 aataagggcaacctggtgcactaaagctcccgcatac 141  Q
    ||||||||||||| |||||||||||||||||||||||    
T  40579747 aataagggcaacccggtgcactaaagctcccgcatac 40579783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 175 - 218
Target Start/End: Original strand, 15296475 - 15296518
Alignment:
Q  175 tattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    |||||||||||| |||||||||| |||||||||| |||||||||    
T  15296475 tattgtacgcagccttaccctgtattttacacaacaggctgttt 15296518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 186
Target Start/End: Original strand, 24860000 - 24860067
Alignment:
Q  119 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcag 186  Q
    |||||||||||||||||||||||| | || | | ||| |||| | ||||||| |||||||||||||||    
T  24860000 ggtgcactaaagctcccgcatacgcagggtccgagaaggggttctaccatttggtgtattgtacgcag 24860067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 142
Target Start/End: Complemental strand, 8576029 - 8575995
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacg 142  Q
    |||||||||||||||||||||||||||| ||||||    
T  8576029 aagggcaacctggtgcactaaagctcccacatacg 8575995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 142
Target Start/End: Complemental strand, 22371246 - 22371212
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacg 142  Q
    |||||||||| ||||||||||||||||||||||||    
T  22371246 aagggcaacccggtgcactaaagctcccgcatacg 22371212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 172 - 241
Target Start/End: Complemental strand, 17705565 - 17705496
Alignment:
Q  172 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctt 241  Q
    ||||||||||| ||| ||||| ||||| |||||||||||||| |||| || || ||||||  ||||||||    
T  17705565 gtgtattgtacacagccttactctgttgtttacacaagaggcggtttccaggacttgaacccgtgacctt 17705496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 59113 - 58975
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||||| | |||||||||||||||||||||| |  | ||| ||| ||||||||||||||   |||||||||||||||||||||||||||||||| |    
T  59113 aagggcaacccgatgcactaaagctcccgcatacgcagagtctgggaaggggtcccaccatttttggtgtattgtacgcagtcttaccctgttttttata 59014  T
Q  206 caagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||||| || || ||||||  |||||||||||    
T  59013 caagaggctgtttccaggacttgaacccgtgacctttca 58975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 68; Significance: 2e-30; HSPs: 37)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 29355856 - 29355994
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||  | ||||||||||||||| |||||||||||| |||||    
T  29355856 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgtttcttaca 29355955  T
Q  206 caagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||||| || || ||||||  |||||||||||    
T  29355956 caagaggctgtttccaggacttgaacccgtgacctttca 29355994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 12221915 - 12222054
Alignment:
Q  108 aagggcaacctggtgcactaaa-gctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttac 204  Q
    |||||||||| ||||||||||| ||||||||||||| | || | | ||| |||||||||||||  | ||||||||||||||| |||||||||||||||||    
T  12221915 aagggcaacccggtgcactaaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttac 12222014  T
Q  205 acaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||||||||||| || || ||||||  |||||||||||    
T  12222015 acaagaggctgtttccaagacttgaacccgtgacctttca 12222054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 1354758 - 1354892
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  1354758 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 1354855  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||| || || ||||||  |||||||||||    
T  1354856 agaggctgtttccaggacttgaaccagtgacctttca 1354892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 9161258 - 9161121
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccat--ttagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    ||||||||||||||||||||||||| ||||||||| | || | | ||| ||||||||||||  ||  |||||||||||||| ||||| ||| ||||||||    
T  9161258 aagggcaacctggtgcactaaagcttccgcatacgcagggtccgagaaggggtcccaccattattgatgtattgtacgcagccttactctg-tttttaca 9161160  T
Q  206 caagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||||| || || |||||| ||||||||||||    
T  9161159 caagaggctgtttccaggacttgaacctgtgacctttca 9161121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 1347096 - 1346962
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  1347096 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 1346999  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    || |||||||| || || ||||||  |||||||||||    
T  1346998 agtggctgtttccaggacttgaacccgtgacctttca 1346962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 32728158 - 32728293
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    ||||||||| ||||||||||||| ||||||||||||| || ||| ||||||| || || |||| || |||||||| |||||||||||||||||||||| |    
T  32728158 aagggcaacatggtgcactaaagttcccgcatacgtagggtctgggaaagggacc-actatttggtatattgtacacagtcttaccctgttttttacata 32728256  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||| ||||| ||  | |||||  ||||||||||||    
T  32728257 agaggttgtttccaaaacttgaatctgtgacctttca 32728293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 114 - 244
Target Start/End: Original strand, 3815084 - 3815214
Alignment:
Q  114 aacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggc 213  Q
    |||| |||||||||||||| ||||||||||| ||   | |||||||||||||||||| ||||||||||||||||| |||| | |||||||||||| || |    
T  3815084 aacccggtgcactaaagcttccgcatacgtagggttcgggaaagggtcccaccatttggtgtattgtacgcagtcgtaccatattttttacacaatagtc 3815183  T
Q  214 tgtttacacgatttgaacttgtgacctttca 244  Q
    ||||| || || ||||||  ||||| |||||    
T  3815184 tgtttccaggacttgaacccgtgacatttca 3815214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 108 - 242
Target Start/End: Original strand, 18277194 - 18277328
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||| ||||| |||||| |||||||||||||||||||  | ||  ||| |||||||||||||| ||||  ||||| ||  ||||||||| ||||||||||    
T  18277194 aaggacaacccggtgcagtaaagctcccgcatacgtagagtctaggaaggggtcccaccatttggtgttctgtactcaaccttaccctgatttttacaca 18277293  T
Q  208 agaggctgtttacacgatttgaacttgtgaccttt 242  Q
    ||||||||||| || |||||||||  |||||||||    
T  18277294 agaggctgtttccaagatttgaacccgtgaccttt 18277328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 154 - 244
Target Start/End: Complemental strand, 20400755 - 20400665
Alignment:
Q  154 aaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||||||| | |||||||||| ||||||||||||||||||||||||||||||||||  ||||| ||  | |||||| ||||||||||||    
T  20400755 aaagggtcccgctatttagtgtactgtacgcagtcttaccctgttttttacacaagagattgtttccataacttgaacctgtgacctttca 20400665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 120 - 244
Target Start/End: Original strand, 7947384 - 7947509
Alignment:
Q  120 gtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    |||||||||||||||| |||||| |||| | | ||| ||| |||||||||| | |||||||||||||| ||||||||| |||||||||| |||| |||||    
T  7947384 gtgcactaaagctcccacatacgcaaggtccgggaagggggcccaccattttggtgtattgtacgcagccttaccctggtttttacacaggaggttgttt 7947483  T
Q  219 acacgatttgaacttgtgacctttca 244  Q
     || || ||||||  |||||||||||    
T  7947484 ccaggagttgaaccggtgacctttca 7947509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 157 - 221
Target Start/End: Complemental strand, 1941940 - 1941876
Alignment:
Q  157 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttaca 221  Q
    |||||||||||||  ||||||||||||||| ||||||||||||||||||||||||| ||||||||    
T  1941940 gggtcccaccattcggtgtattgtacgcagccttaccctgttttttacacaagaggttgtttaca 1941876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 2166411 - 2166549
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||||| |||||||||||||||||| |||  || || | | ||| |||||||||||||  | ||||||||||||||  |||| ||||| |||||||    
T  2166411 aagggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtattttaca 2166510  T
Q  206 caagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||| ||||| || || ||||||  |||||||||||    
T  2166511 caagaggttgtttccaggacttgaacccgtgacctttca 2166549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 2178044 - 2178182
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||||| |||||||||||||||||| |||  || || | | ||| |||||||||||||  | ||||||||||||||  |||| ||||| |||||||    
T  2178044 aagggcaacccggtgcactaaagctcccgaatatatagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttatcctgtattttaca 2178143  T
Q  206 caagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||| ||||| || || ||||||  |||||||||||    
T  2178144 caagaggttgtttccaggacttgaacccgtgacctttca 2178182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 26097292 - 26097184
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||  ||||| ||||||||||||||| |||||||||  |||||||||    
T  26097292 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccttcatttggtgtattgtacgcagccttaccctg--ttttacaca 26097195  T
Q  208 agaggctgttt 218  Q
    |||||||||||    
T  26097194 agaggctgttt 26097184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 25557857 - 25557749
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||| ||  ||||| ||||||||||||||| |||||||||  |||||||||    
T  25557857 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccttcatttggtgtattgtacgcagccttaccctg--ttttacaca 25557760  T
Q  208 agaggctgttt 218  Q
    |||||||||||    
T  25557759 agaggctgttt 25557749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 6024303 - 6024257
Alignment:
Q  172 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||    
T  6024303 gtgtattgtacgcagtcttaccatgttttttacacaagaggctgttt 6024257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 120 - 244
Target Start/End: Original strand, 23240837 - 23240959
Alignment:
Q  120 gtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttta 219  Q
    ||||||||||||||||||||||| |  | |   ||| ||||||||||| || || |||||||||||  |||||||||||||  ||||||||||||||||     
T  23240837 gtgcactaaagctcccgcatacgcattgtcctagaaggggtcccaccaattggtatattgtacgcaaacttaccctgtttt--acacaagaggctgtttc 23240934  T
Q  220 cacgatttgaacttgtgacctttca 244  Q
    || || ||| || ||||||||||||    
T  23240935 caggacttgcacctgtgacctttca 23240959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 154 - 231
Target Start/End: Complemental strand, 33138921 - 33138844
Alignment:
Q  154 aaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaac 231  Q
    ||||||||||||||||| ||||||||||||| | ||||| |||||||||| |||||||| ||||| || || ||||||    
T  33138921 aaagggtcccaccatttggtgtattgtacgcggccttactctgttttttatacaagaggttgtttccaggacttgaac 33138844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 244
Target Start/End: Complemental strand, 12889496 - 12889424
Alignment:
Q  172 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||||||| |||| ||| |||||||||| |||||||||||||||| || || |||||| ||||||||||||    
T  12889496 gtgtattgtatgcagccttgccctgtttttaacacaagaggctgttttcaagacttgaacctgtgacctttca 12889424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 24097711 - 24097579
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||||||  |||||||||| ||||||||| | || | | ||| |||||||||||||| ||    |||| |||| |||||||||||||||| |||    
T  24097711 aagggcaacctgggacactaaagcttccgcatacgcagggtccgggaaggggtcccaccatttggt----tgtaagcagccttaccctgttttttataca 24097616  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||||| ||  | || || |||| |||||||||||    
T  24097615 agaggctggttcgaggacttaaactcgtgacctttca 24097579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 174 - 244
Target Start/End: Complemental strand, 8409311 - 8409241
Alignment:
Q  174 gtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||||| |||||||||||||||||||||||||| |||| || || |||||   |||||||||||    
T  8409311 gtattgtacgcagccttaccctgttttttacacaagaggcagtttccaggacttgaatccgtgacctttca 8409241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 108 - 186
Target Start/End: Complemental strand, 12886047 - 12885967
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca--tttagtgtattgtacgcag 186  Q
    |||||||||| ||||||||||||||||| |||||| | || ||| ||| |||||||||||  ||| |||||||||||||||    
T  12886047 aagggcaacccggtgcactaaagctcccacatacgcagggtctgggaaggggtcccaccattttttgtgtattgtacgcag 12885967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 209
Target Start/End: Original strand, 24751135 - 24751176
Alignment:
Q  168 tttagtgtattgtacgcagtcttaccctgttttttacacaag 209  Q
    |||||||||||||||||||||||||||| |||||||||||||    
T  24751135 tttagtgtattgtacgcagtcttaccctattttttacacaag 24751176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 114 - 231
Target Start/End: Complemental strand, 32579553 - 32579437
Alignment:
Q  114 aacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggc 213  Q
    ||||||| | ||||||||||||||||| | | || ||| ||| |||||||||||||| | ||||||||||||| |||||| |  |||||| || ||||||    
T  32579553 aacctggagtactaaagctcccgcatatgcagggtctgggaaggggtcccaccatttggggtattgtacgcaggcttaccgt-atttttataccagaggc 32579455  T
Q  214 tgtttacacgatttgaac 231  Q
    ||||| || || ||||||    
T  32579454 tgtttccaggacttgaac 32579437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 184
Target Start/End: Original strand, 383761 - 383837
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgc 184  Q
    |||||||||| |||| ||| ||||||||||||||| | || ||| ||| ||||||||| |||| |||||||||||||    
T  383761 aagggcaacccggtggactgaagctcccgcatacgcagggtctgagaaggggtcccacaatttggtgtattgtacgc 383837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 242
Target Start/End: Complemental strand, 14553626 - 14553511
Alignment:
Q  129 agctcccgcatacgtaagggctgcgaaagggtcccacca--tttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatt 226  Q
    |||||||||||||  | || || |||| |||||||||||  ||| ||||||| ||| ||| |||||||| |||||||||||||| ||| ||| || || |    
T  14553626 agctcccgcatacacagggtctacgaaggggtcccaccagttttggtgtattatacacagccttaccctattttttacacaagaagctatttccaggact 14553527  T
Q  227 tgaacttgtgaccttt 242  Q
    ||||| ||||||||||    
T  14553526 tgaacctgtgaccttt 14553511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 153 - 244
Target Start/End: Original strand, 13905026 - 13905116
Alignment:
Q  153 gaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||||||| ||||||| ||| |||||| |||| |||||||||||||||||||||||||  |||| || || |||| |  |||||||||||    
T  13905026 gaaagggtcc-accatttggtgaattgtatgcagccttaccctgttttttacacaagaggtcgttttcaggacttgagcccgtgacctttca 13905116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 17432482 - 17432338
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattt--agtgtattgtacgcagtcttaccct------gttt 199  Q
    |||||||||| ||||||||||||||||||||| |  | |  | | |||| |||| ||||||||  |||||||||||| ||| ||||||||      ||||    
T  17432482 aagggcaacccggtgcactaaagctcccgcatgcacaggatccgggaaaaggtctcaccatttttagtgtattgtacacagccttacccttaccctgttt 17432383  T
Q  200 tttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||| | ||||| || || |||||| ||||||||||||    
T  17432382 tttacacaagatgttgtttccaggacttgaacctgtgacctttca 17432338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 242
Target Start/End: Complemental strand, 28007711 - 28007628
Alignment:
Q  157 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgaccttt 242  Q
    |||||||| ||||| ||||||||||||||| || ||||||  |||||||||||||||| ||| || || ||||||  |||||||||    
T  28007711 gggtcccagcatttggtgtattgtacgcagcctgaccctg--ttttacacaagaggctctttccaggacttgaacccgtgaccttt 28007628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 120 - 244
Target Start/End: Original strand, 15866052 - 15866174
Alignment:
Q  120 gtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttta 219  Q
    |||||||| || ||||||| ||| | || | | ||| |||||||||||||| |||||||  ||||||  ||||||||||||||||  ||||||||||||     
T  15866052 gtgcactatagatcccgcaaacgcagggtccgggaaggggtcccaccatttggtgtatt--acgcagctttaccctgttttttacttaagaggctgtttc 15866149  T
Q  220 cacgatttgaacttgtgacctttca 244  Q
    || || ||||||   ||||||||||    
T  15866150 caggaattgaacccatgacctttca 15866174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 185
Target Start/End: Original strand, 23930128 - 23930205
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgca 185  Q
    |||||||||  |||||||||||||||||||||| | | || | | ||| |||||||||||| | ||||||||||||||    
T  23930128 aagggcaactcggtgcactaaagctcccgcataagcagggtccgtgaaggggtcccaccatctggtgtattgtacgca 23930205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 99 - 188
Target Start/End: Original strand, 3116121 - 3116212
Alignment:
Q  99 aaaaacaataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca--tttagtgtattgtacgcagtc 188  Q
    ||||| || |||||||| | |||| ||||||||||||||||||| |||| | | ||| |||||||||||  ||| ||||||||| |||||||    
T  3116121 aaaaaaaaaaagggcaatccggtgtactaaagctcccgcatacgcaaggtccgagaaggggtcccaccatttttggtgtattgtgcgcagtc 3116212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 183 - 218
Target Start/End: Original strand, 9671161 - 9671196
Alignment:
Q  183 gcagtcttaccctgttttttacacaagaggctgttt 218  Q
    |||| |||||||||||||||||||||||||||||||    
T  9671161 gcagccttaccctgttttttacacaagaggctgttt 9671196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 108 - 179
Target Start/End: Complemental strand, 13267859 - 13267788
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattg 179  Q
    |||||||||| |||||||| ||||||||||||||| | || |   ||| |||||||||||||| ||||||||    
T  13267859 aagggcaacccggtgcactgaagctcccgcatacgcagggtccaggaaggggtcccaccatttggtgtattg 13267788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 99 - 141
Target Start/End: Complemental strand, 6808538 - 6808496
Alignment:
Q  99 aaaaacaataagggcaacctggtgcactaaagctcccgcatac 141  Q
    ||||| || |||||||||| |||||||||||||||||||||||    
T  6808538 aaaaagaaaaagggcaacccggtgcactaaagctcccgcatac 6808496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 140
Target Start/End: Complemental strand, 12892143 - 12892111
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcata 140  Q
    |||||||||| ||||||||||||||||||||||    
T  12892143 aagggcaacccggtgcactaaagctcccgcata 12892111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 167 - 218
Target Start/End: Original strand, 13628316 - 13628368
Alignment:
Q  167 atttagtgtattgtacgcagtcttaccctg-ttttttacacaagaggctgttt 218  Q
    ||||||||||||||||||| | ||||| || ||||||| ||||||||||||||    
T  13628316 atttagtgtattgtacgcaattttaccttgtttttttaaacaagaggctgttt 13628368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 68; Significance: 2e-30; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 98 - 241
Target Start/End: Complemental strand, 24449034 - 24448891
Alignment:
Q  98 taaaaacaataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgt 197  Q
    |||||| || |||||||||| |||||||||||||||| ||||||| | || | | ||| |||||||||||||| ||||||||||||||| |||||||| |    
T  24449034 taaaaaaaaaaagggcaacccggtgcactaaagctcctgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctat 24448935  T
Q  198 tttttacacaagaggctgtttacacgatttgaacttgtgacctt 241  Q
    ||||||||||| ||||||||| || || ||||||  ||||||||    
T  24448934 tttttacacaaaaggctgtttccaggacttgaacccgtgacctt 24448891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 38879717 - 38879579
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||  | ||||||||||||||| |||||||||||||||| |    
T  38879717 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttata 38879618  T
Q  206 caagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||||| || || ||||||  |||||||||||    
T  38879617 caagaggctgtttccaggacttgaacccgtgacctttca 38879579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 108 - 217
Target Start/End: Original strand, 16880648 - 16880757
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    ||||| |||| |||||||||||||||||||||||| | || | | |||  |||| |||||||| ||||||||||||||| ||||||||||||||||||||    
T  16880648 aagggaaacccggtgcactaaagctcccgcatacgcatggtccgggaagtggtcacaccatttggtgtattgtacgcagccttaccctgttttttacaca 16880747  T
Q  208 agaggctgtt 217  Q
    ||||||||||    
T  16880748 agaggctgtt 16880757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 32703556 - 32703422
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  32703556 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 32703459  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||| || || ||||||  |||||||||||    
T  32703458 agaggctgtttccaggacttgaacccgtgacctttca 32703422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 28516434 - 28516571
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacac 206  Q
    |||||||||||||| |||||||||||| |||| || | || ||| ||| |||||||||||||| | |||||||||||||| | || ||||||||||||||    
T  28516434 aagggcaacctggtccactaaagctcctgcatgcgcagggtctgggaatgggtcccaccattttgatgtattgtacgcagccctagcctgttttttacac 28516533  T
Q  207 aagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||| ||||| || || ||||||  |||||||||||    
T  28516534 aagaggatgtttccaagacttgaacccgtgacctttca 28516571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 241
Target Start/End: Complemental strand, 41014452 - 41014320
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| |||||||||||||||||||||| |   || |   ||| |||||||||||||| ||||||||||||||| |||||||||| |||||||||    
T  41014452 aagggcaacccggtgcactaaagctcccgcatatgcggggtccaggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacaca 41014354  T
Q  208 agaggctgtttacacgatttgaacttgtgacctt 241  Q
    ||||||||||| || || ||||||  ||||||||    
T  41014353 agaggctgtttccaggacttgaacccgtgacctt 41014320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 121 - 244
Target Start/End: Complemental strand, 27328875 - 27328750
Alignment:
Q  121 tgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    |||| ||||||||||||||||| | ||   | ||| |||||||||||||  | ||||||||||||||| |||||||||||||||||||||||| ||||||    
T  27328875 tgcattaaagctcccgcatacgcagggttcgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttacacaagagactgttt 27328776  T
Q  219 acacgatttgaacttgtgacctttca 244  Q
     || || |||||| ||||||||||||    
T  27328775 ccaggacttgaacctgtgacctttca 27328750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 241
Target Start/End: Original strand, 4619105 - 4619240
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||||| ||||||||||||||| |||||| |   || | | ||| |||||||||||||  | ||||||||||||||| ||||||||||||||||||    
T  4619105 aagggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttaca 4619204  T
Q  206 caagaggctgtttacacgatttgaacttgtgacctt 241  Q
    ||||||||| ||| || || ||||||  ||||||||    
T  4619205 caagaggctatttccaggacttgaacccgtgacctt 4619240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 243
Target Start/End: Original strand, 8169985 - 8170118
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| |||||||| || |||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  8169985 aagggcaacccggtgcactgaaactcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 8170082  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttc 243  Q
    | ||||||||| || || ||||||  ||||||||||    
T  8170083 aaaggctgtttccaggacttgaacccgtgacctttc 8170118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 43334338 - 43334200
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca--tttagtgtattgtacgcagtcttaccctg-ttttttac 204  Q
    |||||||||| ||||||||||||||||||||| || | || | | ||| |||||||||||  ||| ||||||||||||||| ||||||||| ||||||||    
T  43334338 aagggcaacccggtgcactaaagctcccgcat-cgcagggtccgggaaggggtcccaccatttttggtgtattgtacgcagccttaccctgtttttttac 43334240  T
Q  205 acaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||| |||||||||| || || ||||||  |||||||||||    
T  43334239 acaggaggctgtttccaggacttgaacccgtgacctttca 43334200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 108 - 218
Target Start/End: Original strand, 7097761 - 7097870
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    ||||||| | ||||||||||||||||||||||||| | ||   | ||| ||||| |||||||| ||||||||||||||  ||||||||| ||||||||||    
T  7097761 aagggcagcatggtgcactaaagctcccgcatacgcagggttcgggaaggggtctcaccatttggtgtattgtacgcaaccttaccctg-tttttacaca 7097859  T
Q  208 agaggctgttt 218  Q
    |||||||||||    
T  7097860 agaggctgttt 7097870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 108 - 215
Target Start/End: Original strand, 13801768 - 13801877
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||||| ||||||||||||||| |||||| |   || | | ||| |||||||||||||  | ||||||||||||||| ||||||||||||||||||    
T  13801768 aagggcaacccggtgcactaaagctctcgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgttttttaca 13801867  T
Q  206 caagaggctg 215  Q
    ||||||||||    
T  13801868 caagaggctg 13801877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 35710445 - 35710311
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| ||||||||| |||||||||||| | | |  | | ||| |||||||||||||| |||||||| |||||| |||||||  | |||||||||    
T  35710445 aagggcaacccggtgcactagagctcccgcatatgcatgttccgggaaggggtcccaccatttggtgtattgaacgcagccttaccc--tattttacaca 35710348  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||| || || ||||||  |||||||||||    
T  35710347 agaggctgtttccaggacttgaacccgtgacctttca 35710311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 120 - 236
Target Start/End: Original strand, 19142956 - 19143071
Alignment:
Q  120 gtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttta 219  Q
    |||||||||| |||||||||||| | || | | ||| |||||||||||||| ||||| ||||||||| ||||||||| ||||||||||||||| |||||     
T  19142956 gtgcactaaatctcccgcatacgcatggtccgggaaggggtcccaccatttggtgtactgtacgcagccttaccctg-tttttacacaagaggttgtttc 19143054  T
Q  220 cacgatttgaacttgtg 236  Q
    || || |||||| ||||    
T  19143055 caggacttgaacctgtg 19143071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 119 - 211
Target Start/End: Complemental strand, 43574729 - 43574637
Alignment:
Q  119 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagag 211  Q
    ||||| |||||||||||||||||| | || | | ||| |||||||||||||| || |||||||||||| ||||||||||||| ||||||||||    
T  43574729 ggtgctctaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtatattgtacgcagccttaccctgttttctacacaagag 43574637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 29334530 - 29334419
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt-tagtgtattgtacgcagtcttaccctgttttttacac 206  Q
    ||||||| || |||||| ||||| |||| |||||| | || | | ||| ||||||||||||| | ||||||||||||||| |||||| ||||||||||||    
T  29334530 aagggcagcccggtgcattaaagatcccacatacgcagggtccgggaatgggtcccaccattctggtgtattgtacgcagccttaccttgttttttacac 29334431  T
Q  207 aagaggctgttt 218  Q
    ||||||||||||    
T  29334430 aagaggctgttt 29334419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 111 - 218
Target Start/End: Complemental strand, 30006456 - 30006349
Alignment:
Q  111 ggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaaga 210  Q
    ||||||| ||||||||||||||||||||||| || |  | | ||| |||||||||||||||||||| ||||| ||| ||||||||||| |||| | ||||    
T  30006456 ggcaacccggtgcactaaagctcccgcatacataggccccgggaaggggtcccaccatttagtgtaatgtacacagccttaccctgttgtttatataaga 30006357  T
Q  211 ggctgttt 218  Q
    || |||||    
T  30006356 ggttgttt 30006349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 110 - 218
Target Start/End: Complemental strand, 7368528 - 7368422
Alignment:
Q  110 gggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaag 209  Q
    |||||||| ||||||||| ||||||| |||| | | || | | ||| ||||||||||| || ||||||||||||||| |||||||||  |||||||||||    
T  7368528 gggcaacccggtgcactagagctcccacatatgcagggtccgggaaggggtcccaccaattggtgtattgtacgcagccttaccctg--ttttacacaag 7368431  T
Q  210 aggctgttt 218  Q
    |||||||||    
T  7368430 aggctgttt 7368422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 20135740 - 20135628
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||||| |||||||| ||||||| ||||| |   || | | ||| |||||||||||||  | ||||||||||||||| |||||| |||||||||||    
T  20135740 aagggcaacccggtgcactgaagctcctgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccttgttttttaca 20135641  T
Q  206 caagaggctgttt 218  Q
    |||||||||||||    
T  20135640 caagaggctgttt 20135628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 22187421 - 22187283
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||||||| |||||||||||||| ||||| ||| ||  || ||| ||||| ||   |||   |||||||||||||||||||| | |||||||||||    
T  22187421 aagggcaacctgatgcactaaagctcctgcatatgtagggtttgggaaggggtctcattgtttttggtgtattgtacgcagtcttatcatgttttttaca 22187322  T
Q  206 caagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||||| || || || |||  |||||||||||    
T  22187321 caagaggctgtttccaggacttaaaccggtgacctttca 22187283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 107 - 218
Target Start/End: Original strand, 12006328 - 12006441
Alignment:
Q  107 taagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccat--ttagtgtattgtacgcagtcttaccctgttttttac 204  Q
    ||||||||||  |||||||||||||||||||||| | | || ||| ||| ||||||||||||  || |||||||||| | || |||||||| ||||||||    
T  12006328 taagggcaacacggtgcactaaagctcccgcataggcagggtctgggaaggggtcccaccattattggtgtattgtatggagccttaccctattttttac 12006427  T
Q  205 acaagaggctgttt 218  Q
    | |||||| |||||    
T  12006428 ataagaggttgttt 12006441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 108 - 182
Target Start/End: Complemental strand, 16957448 - 16957374
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtac 182  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||| |||||||||||    
T  16957448 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtac 16957374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 130 - 218
Target Start/End: Complemental strand, 2838890 - 2838803
Alignment:
Q  130 gctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    ||||||||||||| | || | | ||| || ||||||||||| ||||||||||||||| |||||||||| |||||||||||| |||||||    
T  2838890 gctcccgcatacgcagggtccgagaagggatcccaccatttggtgtattgtacgcagccttaccctgt-ttttacacaagatgctgttt 2838803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 196
Target Start/End: Original strand, 34154815 - 34154903
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctg 196  Q
    |||||||||| ||||||||| |||| ||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||    
T  34154815 aagggcaacccggtgcactagagctaccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg 34154903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 244
Target Start/End: Original strand, 42924899 - 42924971
Alignment:
Q  172 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||||||  ||||||||||||||||||||||| | ||||| || || ||||||| |||||||||||    
T  42924899 gtgtattgtacgcaaccttaccctgttttttacacaagatgttgttttcaggacttgaactcgtgacctttca 42924971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 165 - 244
Target Start/End: Original strand, 34074620 - 34074699
Alignment:
Q  165 ccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||| |||||||| |||||  |||||  ||||||||||||||||||||||||  | || |||||||||||||||||||    
T  34074620 ccatttggtgtattgaacgcaaccttactgtgttttttacacaagaggctgtttctaggacttgaacttgtgacctttca 34074699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 153 - 241
Target Start/End: Complemental strand, 1405276 - 1405188
Alignment:
Q  153 gaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctt 241  Q
    |||||||||||||||||| ||||||||||||||  ||||| || ||||||| | |||||| ||||| || || ||||||  ||||||||    
T  1405276 gaaagggtcccaccatttggtgtattgtacgcaaacttactctattttttatataagaggttgtttccaggacttgaacccgtgacctt 1405188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 111 - 167
Target Start/End: Complemental strand, 39801647 - 39801591
Alignment:
Q  111 ggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca 167  Q
    ||||||| |||||||||||||||||||||||||| || ||| ||| |||||||||||    
T  39801647 ggcaacccggtgcactaaagctcccgcatacgtagggtctgggaaggggtcccacca 39801591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 158 - 217
Target Start/End: Complemental strand, 36770864 - 36770806
Alignment:
Q  158 ggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtt 217  Q
    |||||||||||||||||||||||| || | |||||| ||||||||||| |||||||||||    
T  36770864 ggtcccaccatttagtgtattgtatgc-ggcttaccttgttttttacataagaggctgtt 36770806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 208
Target Start/End: Complemental strand, 41426033 - 41425982
Alignment:
Q  157 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaa 208  Q
    ||||||||||| || |||||||||| |||| |||||||||||||||||||||    
T  41426033 gggtcccaccaattggtgtattgtatgcagccttaccctgttttttacacaa 41425982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 157 - 242
Target Start/End: Original strand, 208977 - 209062
Alignment:
Q  157 gggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgaccttt 242  Q
    |||||||||||||| | ||||||| | |||| ||||||||||||| ||||||||||| ||||  || || |||||||||||||||||    
T  208977 gggtcccaccattttggtgtattgaatgcagccttaccctgtttt-tacacaagaggttgttgccaggacttgaacttgtgaccttt 209062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 208
Target Start/End: Complemental strand, 22600569 - 22600488
Alignment:
Q  127 aaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaa 208  Q
    |||||||||||||||| | |  | | ||| || ||||||||||| ||||||||||| ||| |||||||||| ||||||||||    
T  22600569 aaagctcccgcatacgcaggatccgggaagggatcccaccatttggtgtattgtacacagccttaccctgtgttttacacaa 22600488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 22907915 - 22907975
Alignment:
Q  157 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    |||||||||||||| |||||||||| |||  ||||| ||| |||||||||||||||||||||    
T  22907915 gggtcccaccatttggtgtattgtatgcaaccttactctg-tttttacacaagaggctgttt 22907975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 101 - 142
Target Start/End: Original strand, 29184055 - 29184096
Alignment:
Q  101 aaacaataagggcaacctggtgcactaaagctcccgcatacg 142  Q
    |||| |||||||||||| ||||||||||||||||||||||||    
T  29184055 aaactataagggcaacccggtgcactaaagctcccgcatacg 29184096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 188 - 244
Target Start/End: Complemental strand, 22025597 - 22025541
Alignment:
Q  188 cttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||||||||||||||||||||||| || || ||||||   ||||||||||    
T  22025597 cttaccctgttttttacacaagaggctgtttccaggacttgaacccatgacctttca 22025541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 177 - 244
Target Start/End: Original strand, 37024626 - 37024691
Alignment:
Q  177 ttgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||||||| |||||||||||||  |||||||||||||||| || || ||||||  |||||||||||    
T  37024626 ttgtacgcagccttaccctgtttt--acacaagaggctgtttccaggacttgaacccgtgacctttca 37024691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 127 - 218
Target Start/End: Original strand, 24323725 - 24323816
Alignment:
Q  127 aaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    ||||||||||||||   | || ||| ||| ||||||||| |||| | ||||| ||||||  |||||||||| |||||||||||||| |||||    
T  24323725 aaagctcccgcatatacagggtctgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaagaggttgttt 24323816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 127 - 218
Target Start/End: Original strand, 24360349 - 24360440
Alignment:
Q  127 aaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    ||||||||||||||   | || ||| ||| ||||||||| |||| | ||||| ||||||  |||||||||| |||||||||||||| |||||    
T  24360349 aaagctcccgcatatacagggtctgggaaggggtcccactatttggagtattatacgcaagcttaccctgtcttttacacaagaggttgttt 24360440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 106 - 140
Target Start/End: Complemental strand, 19438802 - 19438768
Alignment:
Q  106 ataagggcaacctggtgcactaaagctcccgcata 140  Q
    |||||||||||||||||||||| ||||||||||||    
T  19438802 ataagggcaacctggtgcactagagctcccgcata 19438768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 206
Target Start/End: Original strand, 31694109 - 31694207
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacac 206  Q
    |||||||  ||||||||||||| |||||||||||| |||| ||| ||| | |||||| || |  |||||||||| ||||  ||| ||| ||||||||||    
T  31694109 aagggcagtctggtgcactaaatctcccgcatacgcaaggtctgggaaggagtcccatcaataggtgtattgtatgcagctttagcctattttttacac 31694207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 119 - 200
Target Start/End: Original strand, 9794390 - 9794471
Alignment:
Q  119 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtttt 200  Q
    |||||||||||||| | ||||| |   || ||| ||| || |||||| |||| |||||||||| ||||||||||||||||||    
T  9794390 ggtgcactaaagcttctgcatatgctgggtctgtgaagggatcccactatttggtgtattgtatgcagtcttaccctgtttt 9794471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 157 - 218
Target Start/End: Original strand, 24903746 - 24903807
Alignment:
Q  157 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    ||||| ||||| || ||| ||||||| || ||||||||| |||||||||||| |||||||||    
T  24903746 gggtctcaccaattggtggattgtacacaatcttaccctattttttacacaaaaggctgttt 24903807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 169
Target Start/End: Complemental strand, 25622594 - 25622533
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt 169  Q
    |||||||| | |||||||||||||||||||||||| | || | | ||| |||||||||||||    
T  25622594 aagggcaatccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 25622533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 141
Target Start/End: Complemental strand, 32354261 - 32354228
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatac 141  Q
    |||||||||| |||||||||||||||||||||||    
T  32354261 aagggcaacccggtgcactaaagctcccgcatac 32354228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 68; Significance: 2e-30; HSPs: 73)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 108 - 218
Target Start/End: Original strand, 20639659 - 20639770
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacac 206  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||| | |||||||||||||| |||||||||||||||||||    
T  20639659 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccattttggtgtattgtacgcagccttaccctgttttttacac 20639758  T
Q  207 aagaggctgttt 218  Q
    ||||||||||||    
T  20639759 aagaggctgttt 20639770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 106 - 244
Target Start/End: Original strand, 6430625 - 6430762
Alignment:
Q  106 ataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||||||| ||||| |||||||||||||||||| | || | | |||  ||||||||||||| ||||||||||||||| ||||||||| ||||||||    
T  6430625 ataagggcaacccggtgcgctaaagctcccgcatacgcagggtccgggaagtggtcccaccatttggtgtattgtacgcagccttaccctg-tttttaca 6430723  T
Q  206 caagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||||| || || ||||||  |||||||||||    
T  6430724 caagaggctgtttccatgacttgaacccgtgacctttca 6430762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 110 - 244
Target Start/End: Original strand, 17043398 - 17043531
Alignment:
Q  110 gggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaag 209  Q
    ||||| ||||||||| ||||||||| ||||| | | || ||| ||| |||||||||||||| ||||||||||||||| |||||||||| |||||||||||    
T  17043398 gggcagcctggtgca-taaagctccagcatatgcagggtctgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgtattttacacaag 17043496  T
Q  210 aggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||| || || |||||| ||||||||||||    
T  17043497 aggctgtttccaggacttgaacctgtgacctttca 17043531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 14983968 - 14983858
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    ||||||||| |||| |||||||||||||||||||| | || | | ||| ||||||||||||||||||||||||| |||  |||||||| |||||||||||    
T  14983968 aagggcaacatggtacactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttagtgtattgtaggcaaccttaccctattttttacaca 14983869  T
Q  208 agaggctgttt 218  Q
    |||||||||||    
T  14983868 agaggctgttt 14983858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 25629183 - 25629073
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| |||||||||||||||||||||| ||| || | | ||| |||||||||||||| ||||||||||| ||| |||||||| |||||||||||    
T  25629183 aagggcaacccggtgcactaaagctcccgcatatgtagggtccgggaaggggtcccaccatttggtgtattgtacacagccttaccctattttttacaca 25629084  T
Q  208 agaggctgttt 218  Q
    |||| ||||||    
T  25629083 agagactgttt 25629073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 108 - 241
Target Start/End: Complemental strand, 5648392 - 5648260
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    ||||||||||  ||||||| ||||||||||||||| | || | | ||| |||||||||||||| ||||||||||||||| |||||||||| |||||||||    
T  5648392 aagggcaacccagtgcactgaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgt-ttttacaca 5648294  T
Q  208 agaggctgtttacacgatttgaacttgtgacctt 241  Q
    ||||||||||| || || ||||||  ||||||||    
T  5648293 agaggctgtttccaggacttgaacccgtgacctt 5648260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 108 - 241
Target Start/End: Original strand, 16408602 - 16408737
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||||| |||||||||||||||||||||| |   || | | ||| |||| ||||||||  | ||||||||||||||||||||||||||||||||||    
T  16408602 aagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggttccaccattattggtgtattgtacgcagtcttaccctgttttttaca 16408701  T
Q  206 caagaggctgtttacacgatttgaacttgtgacctt 241  Q
    ||||||||||||| || || ||||||  ||||||||    
T  16408702 caagaggctgtttccaggacttgaacccgtgacctt 16408737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 44363131 - 44363269
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattta--gtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| ||||||||||||||   |||  |||||||||| | ||||||||||||||||    
T  44363131 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttttggtgcgttgtacgcagccctaccctgttttttaca 44363230  T
Q  206 caagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    || |||||||||| || || ||||||| |||||||||||    
T  44363231 cacgaggctgttttcaggacttgaactcgtgacctttca 44363269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 108 - 243
Target Start/End: Complemental strand, 47444091 - 47443956
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    ||||||||||  ||||||| ||||||| ||||| | | || | | ||| |||||||||||||| ||||||||||||||| ||||||||||||||||| ||    
T  47444091 aagggcaacccagtgcactgaagctcctgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctgttttttacgca 47443992  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttc 243  Q
    ||||||||||| || || ||||||  ||||||||||    
T  47443991 agaggctgtttccaggacttgaacccgtgacctttc 47443956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 110 - 241
Target Start/End: Complemental strand, 21647098 - 21646965
Alignment:
Q  110 gggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||| |||||||||||||||||||||| |   || ||| ||| |||||||||||||  | || |||||||||||| |||||||| |||||||||||    
T  21647098 gggcaacccggtgcactaaagctcccgcatatgcggggtctgggaaggggtcccaccattattggtatattgtacgcagccttaccctattttttacaca 21646999  T
Q  208 agaggctgtttacacgatttgaacttgtgacctt 241  Q
    ||||||||||| || || |||||| |||||||||    
T  21646998 agaggctgtttccaggacttgaacctgtgacctt 21646965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 119 - 221
Target Start/End: Original strand, 51865050 - 51865152
Alignment:
Q  119 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    |||||| ||||||||||||||||| | || | | ||| ||| |||||||||| ||||||||||||||| |||||| ||||||||||||||||||||||||    
T  51865050 ggtgcaataaagctcccgcatacgcagggtccgggaaggggccccaccatttggtgtattgtacgcagccttaccatgttttttacacaagaggctgttt 51865149  T
Q  219 aca 221  Q
    |||    
T  51865150 aca 51865152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 47528531 - 47528665
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| ||||||||| ||||||| ||||   | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  47528531 aagggcaacccggtgcactagagctcccacatattcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 47528628  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||| || || |||||| ||||||||||||    
T  47528629 agaggctgtttccaggacttgaacctgtgacctttca 47528665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 48598826 - 48598960
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| ||||||||| |||||| ||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  48598826 aagggcaacccggtgcactagagctccggcatatgcatggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 48598923  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||| || || ||||||  |||||||||||    
T  48598924 agaggctgtttccaggacttgaacccgtgacctttca 48598960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 30639513 - 30639378
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    ||||||||||  ||||||||||||||||||||| | | || | | ||| ||||| |||||||| ||||||||||||||| |||||||||| |||||||||    
T  30639513 aagggcaacccagtgcactaaagctcccgcatatgcagggtccgggaaggggtctcaccatttggtgtattgtacgcagccttaccctgt-ttttacaca 30639415  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||| |||||| || || ||||||  |||||||||||    
T  30639414 agagtctgtttccaggacttgaaccagtgacctttca 30639378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 105 - 241
Target Start/End: Complemental strand, 40915965 - 40915830
Alignment:
Q  105 aataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttac 204  Q
    ||||||||||| | |||||||| ||||||||||||||| | || | | ||| || ||||||||||| ||||||||||||||| |||||| || |||||||    
T  40915965 aataagggcaatccggtgcactgaagctcccgcatacgcagggtccgggaagggctcccaccatttggtgtattgtacgcagccttaccttg-tttttac 40915867  T
Q  205 acaagaggctgtttacacgatttgaacttgtgacctt 241  Q
    |||||||||||||| || || ||||||  ||||||||    
T  40915866 acaagaggctgtttccaggacttgaacccgtgacctt 40915830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 108 - 216
Target Start/End: Complemental strand, 23501923 - 23501813
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||||| |||||||||||||||||||||| | | || | | ||| |||||||||||||  | ||||||||||||||  ||||||||||||||||||    
T  23501923 aagggcaacccggtgcactaaagctcccgcatatgcagggtccgggaaggggtcccaccattattggtgtattgtacgcaaccttaccctgttttttaca 23501824  T
Q  206 caagaggctgt 216  Q
    |||||||||||    
T  23501823 caagaggctgt 23501813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 9832314 - 9832448
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| ||||||||| || ||| ||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  9832314 aagggcaacccggtgcactagagttcctgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 9832411  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||| || || ||||||  |||||||||||    
T  9832412 agaggctgttttcaggacttgaacccgtgacctttca 9832448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 11054149 - 11054283
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||| || |||||| |||||||||||||||||||||||||  |||||||||    
T  11054149 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggttccgccatttggtgtattgtacgcagtcttaccctg--ttttacaca 11054246  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||| |||||| || || ||||||  |||||||||||    
T  11054247 agagactgttttcaggacttgaacccgtgacctttca 11054283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 119 - 244
Target Start/End: Complemental strand, 19027971 - 19027846
Alignment:
Q  119 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    ||||||||||||||||| |||||| |  | |||  || ||||||||||| || ||||||||||||||| ||||||||||||||||||||||| | |||||    
T  19027971 ggtgcactaaagctcccacatacgcagagtctggaaaggggtcccaccaattggtgtattgtacgcagccttaccctgttttttacacaagatgttgttt 19027872  T
Q  219 acacgatttgaacttgtgacctttca 244  Q
     || || ||||||  |||||||||||    
T  19027871 ccaggacttgaacccgtgacctttca 19027846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 20225116 - 20224982
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  20225116 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 20225019  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||| ||||| || || ||||||   ||||||||||    
T  20225018 agaggttgtttccaggacttgaacccatgacctttca 20224982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 109 - 244
Target Start/End: Original strand, 29207900 - 29208033
Alignment:
Q  109 agggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaa 208  Q
    ||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  ||||||||||    
T  29207900 agggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacacaa 29207997  T
Q  209 gaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||  ||| || || ||||||  |||||||||||    
T  29207998 gaggcaatttccaggacttgaacccgtgacctttca 29208033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 35567304 - 35567168
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    ||||||| || |||||||||||||||||||| ||| | ||   | ||| |||||||||||||| |||| |||||| ||| ||||||||||||||||||||    
T  35567304 aagggcagcccggtgcactaaagctcccgcagacgcagggttcgggaaggggtcccaccatttggtgtgttgtacacagccttaccctgttttttacaca 35567205  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    || |||||||| || || ||||||   ||||||||||    
T  35567204 agtggctgtttccaagacttgaacccatgacctttca 35567168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 203
Target Start/End: Original strand, 30690177 - 30690272
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtttttta 203  Q
    ||||||| ||||||||||||||||||||||||||| | || | | ||| ||||||||||| || |||||||||| |||| ||||||||||||||||    
T  30690177 aagggcagcctggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccaattggtgtattgtatgcagccttaccctgtttttta 30690272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 121 - 244
Target Start/End: Complemental strand, 37494972 - 37494849
Alignment:
Q  121 tgcactaaagctcccgcatacgtaagggctgcgaaa-gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttta 219  Q
    |||||||||||||| |||||||  ||||   ||||| |||||||||||||| || ||||||| |||  ||||||||||||||||||||||||| |||||     
T  37494972 tgcactaaagctcctgcatacg-cagggtcccgaaaggggtcccaccatttggtatattgtatgcaaccttaccctgttttttacacaagaggttgtttc 37494874  T
Q  220 cacgatttgaacttgtgacctttca 244  Q
    || || |||||| ||||||||||||    
T  37494873 caggacttgaacctgtgacctttca 37494849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 5306661 - 5306800
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccg----catacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtttttta 203  Q
    |||||||||| |||||| |||||||||||    |||||| | || | | ||| |||||||||||||| ||||||||||||||  |||||||||  |||||    
T  5306661 aagggcaacccggtgcattaaagctcccgtccacatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg-atttta 5306759  T
Q  204 cacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||||||| || || ||||||  |||||||||||    
T  5306760 cacaagaggctgtttccaggacttgaacccgtgacctttca 5306800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 108 - 210
Target Start/End: Original strand, 12711450 - 12711553
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccct-gttttttacac 206  Q
    |||||||||  |||||||||||| | |||||||||  ||| ||| ||| ||||||| |||||| ||||||||||||||||||||||||  ||||||||||    
T  12711450 aagggcaactgggtgcactaaagtttccgcatacgctaggtctgagaaggggtcccgccatttggtgtattgtacgcagtcttaccctatttttttacac 12711549  T
Q  207 aaga 210  Q
    ||||    
T  12711550 aaga 12711553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 20405223 - 20405110
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgtt-ttttac 204  Q
    ||||||||||   |||||||||||||||||||| |   || | | ||| |||||||||||||  |||||||||||||||| |||||||||||| ||||||    
T  20405223 aagggcaacccaatgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattagtgtattgtacgcaatcttaccctgtttttttac 20405124  T
Q  205 acaagaggctgttt 218  Q
    ||||||||||||||    
T  20405123 acaagaggctgttt 20405110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 16911698 - 16911586
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||||| |||  |||||||||||||| |||| | || | | ||| |||||||||||||  | ||||||||||||||| ||||||||| ||| ||||    
T  16911698 aagggcaacccggtaaactaaagctcccgcgtacgcagggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgatttgtaca 16911599  T
Q  206 caagaggctgttt 218  Q
    |||||||||||||    
T  16911598 caagaggctgttt 16911586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 107 - 218
Target Start/End: Original strand, 7909280 - 7909391
Alignment:
Q  107 taagggcaacctggtgcactaaagctccc-gcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    ||||||||||| | ||||||||||||||| ||||||| | ||   | ||| |||||||||||||| ||||||||||||||  ||||||||| ||||||||    
T  7909280 taagggcaacccgatgcactaaagctccccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctg-tttttaca 7909378  T
Q  206 caagaggctgttt 218  Q
    |||||| ||||||    
T  7909379 caagagactgttt 7909391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 107 - 231
Target Start/End: Original strand, 8473620 - 8473744
Alignment:
Q  107 taagggcaacctggtgcactaaagctcccgcatacgtaaggg--ctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttac 204  Q
    ||||||||||| |||||||||||||||||||||| | | |||  | | ||| |||||||||||||| |||||||||| |||| |||||||||  ||  ||    
T  8473620 taagggcaacccggtgcactaaagctcccgcatatgcaggggtccggggaaggggtcccaccatttggtgtattgtatgcagccttaccctg--ttaaac 8473717  T
Q  205 acaagaggctgtttacacgatttgaac 231  Q
    |||||||||||||| || || ||||||    
T  8473718 acaagaggctgtttccaggacttgaac 8473744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 107 - 218
Target Start/End: Complemental strand, 21489223 - 21489111
Alignment:
Q  107 taagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||| ||||||  |||||| |||||||||||||||| | ||   | ||| |||||||||||||| | || ||||||||||||||||| |||||||||||     
T  21489223 taagagcaacccagtgcacgaaagctcccgcatacgcagggttcgggaaggggtcccaccattttggtgcattgtacgcagtcttactctgttttttacg 21489124  T
Q  206 caagaggctgttt 218  Q
    |||||||||||||    
T  21489123 caagaggctgttt 21489111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 116 - 244
Target Start/End: Complemental strand, 25463247 - 25463120
Alignment:
Q  116 cctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctg 215  Q
    |||||||||| |||||||||||||| | | || | | ||| |||||||||||||| |||| |||||||||  ||| ||| ||||||||||||||||| ||    
T  25463247 cctggtgcac-aaagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtgttgtacgcaacctttcccagttttttacacaagaggttg 25463149  T
Q  216 tttacacgatttgaacttgtgacctttca 244  Q
    ||| || || ||||||  |||||||||||    
T  25463148 tttccaggacttgaacccgtgacctttca 25463120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 54175199 - 54175088
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaaggg-tcccaccatttag-tgtattgtacgcagtcttaccctgttttttaca 205  Q
    ||||||| || |||||||||||||||||||||| | | || | | | ||||| ||||||||||| | |||||||||||||| |||||||||| |||||||    
T  54175199 aagggcagcccggtgcactaaagctcccgcatatgcagggtccggggaaggggtcccaccattttggtgtattgtacgcagccttaccctgt-ttttaca 54175101  T
Q  206 caagaggctgttt 218  Q
    |||||||||||||    
T  54175100 caagaggctgttt 54175088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 119 - 218
Target Start/End: Original strand, 9987846 - 9987945
Alignment:
Q  119 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    |||||| ||||||||||||||| | |||| |   ||| |||||||||||||| |||||||||| |||| |||||||| || ||||||||||||| |||||    
T  9987846 ggtgcattaaagctcccgcatatgcaaggtcaaggaaggggtcccaccatttggtgtattgtatgcagccttaccctattgtttacacaagaggttgttt 9987945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 55766467 - 55766558
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttt 199  Q
    ||||||| || ||||||||||||||| |||||||| |||| | | ||  |||| |||||||| |||||||||||||||| ||||||||||||    
T  55766467 aagggcatcccggtgcactaaagctctcgcatacgcaaggtccgggatggggttccaccattcagtgtattgtacgcagccttaccctgttt 55766558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 108 - 199
Target Start/End: Original strand, 55830722 - 55830813
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttt 199  Q
    ||||||| |||||||||||||||||| |||||||| |||| | | ||  |||| |||||||| ||||||||||||||||  |||||||||||    
T  55830722 aagggcatcctggtgcactaaagctctcgcatacgcaaggtccgggatggggttccaccattcagtgtattgtacgcagcattaccctgttt 55830813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 108 - 214
Target Start/End: Original strand, 13256400 - 13256508
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttaca 205  Q
    |||||||||| |||||||||||||||||||| | |   ||   | ||| ||||||||| |||  | ||||||||||||||| ||||||||||||||||||    
T  13256400 aagggcaacccggtgcactaaagctcccgcagatgcggggttcgggaaggggtcccactattattggtgtattgtacgcagccttaccctgttttttaca 13256499  T
Q  206 caagaggct 214  Q
    |||||||||    
T  13256500 caagaggct 13256508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 17079697 - 17079754
Alignment:
Q  153 gaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaaga 210  Q
    |||||||||||||||||||| |||||||| |||| ||||||||||||| |||||||||    
T  17079697 gaaagggtcccaccatttagcgtattgtatgcagccttaccctgttttatacacaaga 17079754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 39029111 - 39029172
Alignment:
Q  158 ggtcccaccattta-gtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    |||||||||||||  ||||||||||| ||| |||||||||||||||||||||||||||||||    
T  39029111 ggtcccaccattttcgtgtattgtacacagccttaccctgttttttacacaagaggctgttt 39029172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 172 - 244
Target Start/End: Complemental strand, 7038122 - 7038051
Alignment:
Q  172 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||||||||| ||||||||||| |||||||||||||| ||||||| || || |||||| ||||||||||||    
T  7038122 gtgtattgtacgaagtcttaccctattttttacacaagaagctgttt-caggacttgaacctgtgacctttca 7038051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 120 - 244
Target Start/End: Original strand, 41018807 - 41018930
Alignment:
Q  120 gtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttta 219  Q
    |||||||||||| ||  |||||| |||| ||| ||| ||||||||| |||| |||||||||||| || ||||||||   |||||||||||||| |||||     
T  41018807 gtgcactaaagcccctccatacgcaaggtctgggaaggggtcccactatttggtgtattgtacgtagccttaccct-aattttacacaagaggttgtttc 41018905  T
Q  220 cacgatttgaacttgtgacctttca 244  Q
    || || ||||||  |||||||||||    
T  41018906 caggacttgaacccgtgacctttca 41018930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 153 - 244
Target Start/End: Original strand, 7385522 - 7385613
Alignment:
Q  153 gaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||||||||||||||| |||||||| || ||  |||||||| ||||||||||| |||||||||| || |  ||||||  |||||||||||    
T  7385522 gaaagggtcccaccatttggtgtattgcacacaaccttaccctattttttacacatgaggctgtttccagggcttgaacccgtgacctttca 7385613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 218
Target Start/End: Complemental strand, 49796911 - 49796822
Alignment:
Q  128 aagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    ||||||||||||||| | ||   | ||| |||||||||||||| ||||||||||||||| |||||| || |||| ||||||||||||||||    
T  49796911 aagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtattgtacgcagccttaccatg-ttttaacacaagaggctgttt 49796822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 110 - 244
Target Start/End: Complemental strand, 54967151 - 54967019
Alignment:
Q  110 gggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaag 209  Q
    ||||| || ||||||| |||||||||||||| ||| ||   | ||| |||||||||||||| || ||||||| |||  ||||||||||||||||||||||    
T  54967151 gggcagcccggtgcac-aaagctcccgcatatgtagggtacgggaaggggtcccaccatttggtatattgta-gcaaccttaccctgttttttacacaag 54967054  T
Q  210 aggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||| | ||| ||  | |||||| ||||||||||||    
T  54967053 aggttctttccagaacttgaacatgtgacctttca 54967019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 160 - 244
Target Start/End: Original strand, 487187 - 487272
Alignment:
Q  160 tcccaccattt-agtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||| ||||||||||||||||  ||||| |||||| ||||||||||| ||||| || || ||||||  |||||||||||    
T  487187 tcccaccattttagtgtattgtacgcagctttaccttgttttatacacaagaggttgtttccaagacttgaacccgtgacctttca 487272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 197
Target Start/End: Complemental strand, 20225210 - 20225119
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccat--ttagtgtattgtacgcagtcttaccctgt 197  Q
    |||||||||| |||||||||||||||||||||| |   || | | ||| ||||||||||||  || ||||||||||||||| ||||||||||    
T  20225210 aagggcaacccggtgcactaaagctcccgcatatgcggggtccgggaaggggtcccaccattattggtgtattgtacgcagccttaccctgt 20225119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 108 - 203
Target Start/End: Original strand, 20908637 - 20908733
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca-tttagtgtattgtacgcagtcttaccctgtttttta 203  Q
    ||||||| ||| ||||||||||||||||||||||| | ||   | ||| ||||||||||| ||| ||||||||||||||| |||||| | |||||||    
T  20908637 aagggcagccttgtgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccattttggtgtattgtacgcagccttaccttctttttta 20908733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 172 - 240
Target Start/End: Complemental strand, 25343257 - 25343189
Alignment:
Q  172 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacct 240  Q
    ||||||||||||||| |||||||||||||||||||||||| || ||| ||  | |||||| ||||||||    
T  25343257 gtgtattgtacgcagccttaccctgttttttacacaagagactatttccagaacttgaacctgtgacct 25343189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 158 - 211
Target Start/End: Original strand, 48327814 - 48327869
Alignment:
Q  158 ggtcccaccatt--tagtgtattgtacgcagtcttaccctgttttttacacaagag 211  Q
    ||||||||||||  | |||||||||| |||||||||||||||||||||||||||||    
T  48327814 ggtcccaccattattggtgtattgtatgcagtcttaccctgttttttacacaagag 48327869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 111 - 244
Target Start/End: Original strand, 39077800 - 39077931
Alignment:
Q  111 ggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagg-gtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaag 209  Q
    ||||||| ||||||||| |||||||||||| | | || | | |||||  ||| |||||||| || |||||||||||  |||||||||||||  |||||||    
T  39077800 ggcaacccggtgcactagagctcccgcatatgcagggtccg-gaaagatgtctcaccatttggtatattgtacgcaaccttaccctgtttt--acacaag 39077896  T
Q  210 aggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||| || || ||||||  |||||||||||    
T  39077897 aggctgtttccaggacttgaacccgtgacctttca 39077931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 157 - 244
Target Start/End: Original strand, 47441580 - 47441667
Alignment:
Q  157 gggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||| ||||||| ||||||||||| ||| ||||||||| |||||||| ||||| ||||||    || |||||| ||||||||||||    
T  47441580 gggtccaaccatttggtgtattgtacacagccttaccctgatttttacaaaagagactgtttcttggacttgaacctgtgacctttca 47441667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 125 - 244
Target Start/End: Original strand, 49938611 - 49938727
Alignment:
Q  125 ctaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacg 223  Q
    |||||||||||||||| | | ||  || ||| |||||||||||||| | |||||||||| |   ||||||| ||||| ||||||||||||||||| || |    
T  49938611 ctaaagctcccgcatatgcagggtatgggaaggggtcccaccattttggtgtattgtacac---cttaccccgtttt-tacacaagaggctgtttccagg 49938706  T
Q  224 atttgaacttgtgacctttca 244  Q
    | |||||| ||||||||||||    
T  49938707 acttgaacctgtgacctttca 49938727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 218
Target Start/End: Complemental strand, 14590922 - 14590861
Alignment:
Q  158 ggtcccaccatttagtgtattgtacgcagtcttaccctgtt-ttttacacaagaggctgttt 218  Q
    |||||||||||||  ||||||||| |||| ||||||||||| ||||| ||||||||||||||    
T  14590922 ggtcccaccatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgttt 14590861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 186
Target Start/End: Original strand, 30352581 - 30352661
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccacca--tttagtgtattgtacgcag 186  Q
    |||||||||  |||||||||||||||||||||||| | || | | ||| |||||||||||  ||| |||||||||||||||    
T  30352581 aagggcaacacggtgcactaaagctcccgcatacgcagggtccgagaaggggtcccaccatttttggtgtattgtacgcag 30352661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 38755909 - 38755970
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt 169  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||    
T  38755909 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 38755970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 157 - 231
Target Start/End: Original strand, 30581515 - 30581591
Alignment:
Q  157 gggtcccaccatttag-tgtattgtacgcagtcttaccctgtttt-ttacacaagaggctgtttacacgatttgaac 231  Q
    |||||||||||||| | |||||||||| ||  ||||||||||||| |||||||||||| ||||| ||||| ||||||    
T  30581515 gggtcccaccattttggtgtattgtacacacccttaccctgtttttttacacaagaggttgtttccacgacttgaac 30581591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 99 - 142
Target Start/End: Complemental strand, 35532135 - 35532092
Alignment:
Q  99 aaaaacaataagggcaacctggtgcactaaagctcccgcatacg 142  Q
    ||||| || |||||||||| ||||||||||||||||||||||||    
T  35532135 aaaaaaaaaaagggcaacccggtgcactaaagctcccgcatacg 35532092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 198
Target Start/End: Complemental strand, 2813262 - 2813169
Alignment:
Q  108 aagggcaacctggtgcact-aaagctcccgcatacgtaagggctgcgaaagggtcccaccatt--tagtgtattgtacgcagtcttaccctgtt 198  Q
    |||||||| | |||||||| |||||||||||||||| |  |   | |||||||||||||||||  |  ||||||||||||||||||||||||||    
T  2813262 aagggcaatccggtgcacttaaagctcccgcatacgcatcgttcgggaaagggtcccaccattattgatgtattgtacgcagtcttaccctgtt 2813169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 142
Target Start/End: Complemental strand, 11394986 - 11394952
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacg 142  Q
    |||||||||| ||||||||||||||||||||||||    
T  11394986 aagggcaacccggtgcactaaagctcccgcatacg 11394952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 142
Target Start/End: Complemental strand, 11404713 - 11404679
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacg 142  Q
    |||||||||| ||||||||||||||||||||||||    
T  11404713 aagggcaacccggtgcactaaagctcccgcatacg 11404679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 180 - 214
Target Start/End: Original strand, 23580281 - 23580315
Alignment:
Q  180 tacgcagtcttaccctgttttttacacaagaggct 214  Q
    ||||||||||| |||||||||||||||||||||||    
T  23580281 tacgcagtcttcccctgttttttacacaagaggct 23580315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 159 - 244
Target Start/End: Original strand, 30496374 - 30496457
Alignment:
Q  159 gtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||| |||||| |||||||||| |||| |||||||   | ||||||||||||||||||| || || ||||||  |||||||||||    
T  30496374 gtccccccatttggtgtattgtatgcagccttacccg--tgtttacacaagaggctgtttccatgacttgaacacgtgacctttca 30496457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 178
Target Start/End: Complemental strand, 38786743 - 38786673
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtatt 178  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| |||||||    
T  38786743 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtatt 38786673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 108 - 142
Target Start/End: Original strand, 40553938 - 40553972
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacg 142  Q
    |||||||||| ||||||||||||||||||||||||    
T  40553938 aagggcaacccggtgcactaaagctcccgcatacg 40553972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 172 - 218
Target Start/End: Complemental strand, 51420644 - 51420598
Alignment:
Q  172 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    ||||||||||| ||| ||||||||||||| ||||||||||| |||||    
T  51420644 gtgtattgtacccagccttaccctgttttctacacaagaggttgttt 51420598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 108 - 169
Target Start/End: Original strand, 33836488 - 33836549
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatt 169  Q
    |||||||||| | |||||||||||||||||||||| | || | | ||| |||||||||||||    
T  33836488 aagggcaacccgttgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatt 33836549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 10277758 - 10277879
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||| | ||| ||||| | |||||||||| | | || ||| ||| ||||  |||||||| ||||||||||||||| |||| ||  | ||||| |||    
T  10277758 aagggcaatccggttcactagaactcccgcatatgcagggtctgggaaggggtttcaccatttggtgtattgtacgcagccttatcc--tattttataca 10277855  T
Q  208 agaggctgtttacacgatttgaac 231  Q
    |||||||||||  | |||||||||    
T  10277856 agaggctgtttcaaggatttgaac 10277879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 123 - 200
Target Start/End: Complemental strand, 16494338 - 16494259
Alignment:
Q  123 cactaaagctcccgcatacgtaagggctgcgaaagggtcccacca--tttagtgtattgtacgcagtcttaccctgtttt 200  Q
    |||||||||| ||||||||  | || ||| |||||||||||||||  ||| |||||||||| ||||  ||||||||||||    
T  16494338 cactaaagcttccgcatacacagggtctgggaaagggtcccaccatttttggtgtattgtatgcagctttaccctgtttt 16494259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 240
Target Start/End: Original strand, 32478793 - 32478918
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||| ||| ||||||| ||||||||||||||||   || | | ||| |||||||||||||| |||||||     ||| ||||||||| |||||||||     
T  32478793 aagggccacccggtgcac-aaagctcccgcatacgctgggtccgggaaggggtcccaccatttggtgtatt-----cagccttaccctg-tttttacact 32478885  T
Q  208 agaggctgtttacacgatttgaacttgtgacct 240  Q
    ||||| ||||| || || |||||| ||||||||    
T  32478886 agaggttgtttccaggacttgaacctgtgacct 32478918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 140
Target Start/End: Complemental strand, 32484367 - 32484335
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcata 140  Q
    |||||||||| ||||||||||||||||||||||    
T  32484367 aagggcaacccggtgcactaaagctcccgcata 32484335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 157 - 208
Target Start/End: Original strand, 35894511 - 35894563
Alignment:
Q  157 gggtcccaccatttag-tgtattgtacgcagtcttaccctgttttttacacaa 208  Q
    |||||||||||||| | |||||||||||||  |||||| ||||||||||||||    
T  35894511 gggtcccaccattttggtgtattgtacgcacacttaccgtgttttttacacaa 35894563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 168
Target Start/End: Complemental strand, 44718701 - 44718641
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccat 168  Q
    |||||||||| ||||  |||||||||||||||||| | || ||| ||| ||||||||||||    
T  44718701 aagggcaacccggtgtgctaaagctcccgcatacgcagggtctgggaaggggtcccaccat 44718641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 108 - 140
Target Start/End: Complemental strand, 56323034 - 56323002
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcata 140  Q
    |||||||||| ||||||||||||||||||||||    
T  56323034 aagggcaacccggtgcactaaagctcccgcata 56323002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 63; Significance: 2e-27; HSPs: 4)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 99 - 217
Target Start/End: Original strand, 24764 - 24882
Alignment:
Q  99 aaaaacaataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtt 198  Q
    ||||| || |||||||||| | |||||||||||||||||||||| | ||   | ||| |||||||||||||| |||| |||||||||| |||||||||||    
T  24764 aaaaaaaaaaagggcaaccggctgcactaaagctcccgcatacgcagggttcgggaaggggtcccaccatttggtgtgttgtacgcagccttaccctgtt 24863  T
Q  199 ttttacacaagaggctgtt 217  Q
    |||||||||||||||||||    
T  24864 ttttacacaagaggctgtt 24882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 108 - 218
Target Start/End: Complemental strand, 46965 - 46855
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| |||||||||||||||||||||||| | || | | ||| |||||||||||||| ||||||||||||||  |||||||| |||||||||||    
T  46965 aagggcaacccggtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattgtacgcaaccttaccctattttttacaca 46866  T
Q  208 agaggctgttt 218  Q
    ||||| |||||    
T  46865 agaggttgttt 46855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 120 - 218
Target Start/End: Complemental strand, 43780 - 43683
Alignment:
Q  120 gtgcactaaagctcccgcatacgtaagggctgcgaaaggg-tcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    |||||||| |||||||||||| | | || | | ||||||| ||||||||||| ||||||||||||||| |||||| ||  |||||||||||| |||||||    
T  43780 gtgcactagagctcccgcatatgcagggtccgagaaaggggtcccaccatttggtgtattgtacgcagccttaccttg--ttttacacaagacgctgttt 43683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 110 - 170
Target Start/End: Original strand, 46710 - 46770
Alignment:
Q  110 gggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccattt 170  Q
    ||||| |||| |||| ||||||||||||||||| | || ||| ||| ||||||||||||||    
T  46710 gggcagcctgatgcattaaagctcccgcatacgcagggtctgggaaggggtcccaccattt 46770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0258 (Bit Score: 61; Significance: 3e-26; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 108 - 244
Target Start/End: Original strand, 13025 - 13160
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| ||||||||||||| |||||||||| | || ||| ||| |||||||||||||  ||||||||||||||| |||||| || ||||||| ||    
T  13025 aagggcaacccggtgcactaaagcccccgcatacgcagggtctgggaaggggtcccaccattcggtgtattgtacgcagccttaccttg-tttttacgca 13123  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||| || || ||||||  |||||||||||    
T  13124 agaggctgtttccaggacttgaaccggtgacctttca 13160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0168 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0168
Description:

Target: scaffold0168; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 30711 - 30577
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| | |||||||  |||||||||    
T  30711 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccctaccctg--ttttacaca 30614  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||| || || ||||||  |||||||||||    
T  30613 agaggctgtttccaggacttgaaccggtgacctttca 30577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0015 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 108 - 231
Target Start/End: Original strand, 48635 - 48756
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||| ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||||  |||||||||    
T  48635 aagggcaacccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccctg--ttttacaca 48732  T
Q  208 agaggctgtttacacgatttgaac 231  Q
    ||||||||||| ||| | ||||||    
T  48733 agaggctgtttccaccacttgaac 48756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 120 - 218
Target Start/End: Complemental strand, 10932 - 10834
Alignment:
Q  120 gtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgttt 218  Q
    ||||||||||||||||||||||| | || | | ||| |||||||||||||| |||||||| |||||| | ||||||||||||||||||||||| |||||    
T  10932 gtgcactaaagctcccgcatacgcagggtccgggaaggggtcccaccatttggtgtattggacgcagccctaccctgttttttacacaagaggttgttt 10834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 52; Significance: 6e-21; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 108 - 211
Target Start/End: Original strand, 72868 - 72971
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    ||||||||||||||||||||||||||||||||||| | |  | | ||| |||| | ||||||| |||||||||| |||| |||||| |||||||||||||    
T  72868 aagggcaacctggtgcactaaagctcccgcatacgcaggttccgggaaggggtactaccatttggtgtattgtaggcagccttaccgtgttttttacaca 72967  T
Q  208 agag 211  Q
    ||||    
T  72968 agag 72971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 108 - 244
Target Start/End: Complemental strand, 11263 - 11129
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacaca 207  Q
    |||||||||||||||||||| |||||||||||| | | || | | ||| | |||||||||||| |||||||||| |||| ||||  || | |||||||||    
T  11263 aagggcaacctggtgcactagagctcccgcatatgcagggtccgggaaggtgtcccaccatttggtgtattgtaagcagcctta--ctttgttttacaca 11166  T
Q  208 agaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||| || || ||||||  |||||||||||    
T  11165 agaggctgtttccaggacttgaacccgtgacctttca 11129  T

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Target: scaffold0187 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0187
Description:

Target: scaffold0187; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 109 - 244
Target Start/End: Original strand, 10052 - 10185
Alignment:
Q  109 agggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaa 208  Q
    ||||||||| ||||||||  |||||| ||||| | | || | | ||| ||||||||| |||| ||||||||||||||||||||| |||  ||||||||||    
T  10052 agggcaacccggtgcactggagctcctgcatatgcagggtccgggaaggggtcccactatttggtgtattgtacgcagtcttactctg--ttttacacaa 10149  T
Q  209 gaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||||||| || || ||||||  |||||||||||    
T  10150 gaggctgtttccaggacttgaacccgtgacctttca 10185  T

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Target: scaffold0187; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 109 - 244
Target Start/End: Original strand, 20380 - 20513
Alignment:
Q  109 agggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaa 208  Q
    ||||||||| ||||||||  |||||| ||||| | | || | | ||| ||||||||| |||| ||||||||||||||||||||| |||  ||||||||||    
T  20380 agggcaacccggtgcactggagctcctgcatatgcagggtccgggaaggggtcccactatttggtgtattgtacgcagtcttactctg--ttttacacaa 20477  T
Q  209 gaggctgtttacacgatttgaacttgtgacctttca 244  Q
    |||||||||| || || ||||||  |||||||||||    
T  20478 gaggctgtttccaggacttgaacccgtgacctttca 20513  T

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Target: scaffold1176 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold1176
Description:

Target: scaffold1176; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 111 - 244
Target Start/End: Original strand, 1591 - 1722
Alignment:
Q  111 ggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaaga 210  Q
    ||||||||||||||||||||||||||||||||   || | | ||| |||||||| ||||| |||||||||| |||| |||| ||||  ||||||||||||    
T  1591 ggcaacctggtgcactaaagctcccgcatacgccgggtccgggaaggggtcccatcatttggtgtattgtatgcagccttatcctg--ttttacacaaga 1688  T
Q  211 ggctgtttacacgatttgaacttgtgacctttca 244  Q
    || ||||| || || ||||||   ||||||||||    
T  1689 ggttgttttcaggacttgaacccatgacctttca 1722  T

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Target: scaffold0036 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 153 - 241
Target Start/End: Original strand, 35063 - 35152
Alignment:
Q  153 gaaagggtcccaccatttagtgtattgtacgcagtcttaccctgtttt-ttacacaagaggctgtttacacgatttgaacttgtgacctt 241  Q
    |||||||||||||||||| ||||||||||||||| |||||||||||||   ||||||||| |||||| || || ||||||  ||||||||    
T  35063 gaaagggtcccaccatttggtgtattgtacgcagccttaccctgttttcacacacaagagactgttttcaggacttgaacccgtgacctt 35152  T

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Target: scaffold0167 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 127 - 231
Target Start/End: Complemental strand, 23714 - 23610
Alignment:
Q  127 aaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatt 226  Q
    ||||||||| |||||  |||| ||| ||| ||||||||||||||  |  ||||||||||| || |||||||||||||||||||||| ||||| || || |    
T  23714 aaagctcccacatactcaaggtctgggaaggggtcccaccatttgctacattgtacgcagcctcaccctgttttttacacaagaggttgtttgcaagact 23615  T
Q  227 tgaac 231  Q
    |||||    
T  23614 tgaac 23610  T

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Target: scaffold0180 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 108 - 194
Target Start/End: Original strand, 24134 - 24220
Alignment:
Q  108 aagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccc 194  Q
    |||||||| | ||||||||| |||||||||||| | | || | | ||| |||||||||||||| ||||||||||||||| |||||||    
T  24134 aagggcaatccggtgcactagagctcccgcatatgcagggtccgggaaggggtcccaccatttggtgtattgtacgcagccttaccc 24220  T

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Target: scaffold0028 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 152 - 212
Target Start/End: Complemental strand, 33021 - 32960
Alignment:
Q  152 cgaaagggtcccacca-tttagtgtattgtacgcagtcttaccctgttttttacacaagagg 212  Q
    |||||||||||||||| ||| ||||||||||  ||||||||| |||||||||||| ||||||    
T  33021 cgaaagggtcccaccaatttggtgtattgtatacagtcttactctgttttttacagaagagg 32960  T

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Target: scaffold0005 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 226456 - 226517
Alignment:
Q  158 ggtcccaccatttagtgtattgtacgcagtcttaccctg-ttttttacacaagaggctgttt 218  Q
    |||||||||||||  ||||||||| |||| ||||||||| ||||||| ||||||||||||||    
T  226456 ggtcccaccatttgatgtattgtatgcagccttaccctgtttttttagacaagaggctgttt 226517  T

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Target: scaffold0254 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0254
Description:

Target: scaffold0254; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 172 - 244
Target Start/End: Complemental strand, 4227 - 4155
Alignment:
Q  172 gtgtattgtacgcagtcttaccctgttttttacacaagaggctgtttacacgatttgaacttgtgacctttca 244  Q
    ||||||||||||||  |||| ||||| |||||||||||||| ||||| || || ||||||  |||||||||||    
T  4227 gtgtattgtacgcaaccttatcctgtattttacacaagaggttgtttccaggacttgaacccgtgacctttca 4155  T

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Target: scaffold0954 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0954
Description:

Target: scaffold0954; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 119 - 214
Target Start/End: Complemental strand, 3667 - 3572
Alignment:
Q  119 ggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccctgttttttacacaagaggct 214  Q
    |||||||||||||| ||||||||| | ||   | ||| |||||||| ||||  ||||||| ||||||| |||||| | | ||||||||||||||||    
T  3667 ggtgcactaaagctgccgcatacgcagggttcgggaaggggtcccatcattcggtgtattatacgcagccttaccttatattttacacaagaggct 3572  T

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Target: scaffold0194 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 194
Target Start/End: Complemental strand, 24792 - 24696
Alignment:
Q  98 taaaaacaataagggcaacctggtgcactaaagctcccgcatacgtaagggctgcgaaagggtcccaccatttagtgtattgtacgcagtcttaccc 194  Q
    |||||| || |||||||| | |||||||| ||||||||| ||||| | || |||  || |||  |||| |||| ||||||| |||||||||||||||    
T  24792 taaaaaaaaaaagggcaatcaggtgcactgaagctcccgtatacgcagggtctggaaagggggtccactatttggtgtattatacgcagtcttaccc 24696  T

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