View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15713_high_3 (Length: 448)

Name: NF15713_high_3
Description: NF15713
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15713_high_3
NF15713_high_3
[»] chr6 (5 HSPs)
chr6 (113-434)||(31774276-31774591)
chr6 (18-61)||(31774180-31774223)
chr6 (299-354)||(26559165-26559220)
chr6 (296-349)||(2455896-2455949)
chr6 (309-349)||(3738200-3738240)
[»] chr8 (9 HSPs)
chr8 (309-364)||(44236739-44236794)
chr8 (310-364)||(7008698-7008752)
chr8 (303-349)||(1889066-1889112)
chr8 (298-348)||(5226603-5226653)
chr8 (296-346)||(24326117-24326167)
chr8 (296-366)||(30191055-30191125)
chr8 (296-349)||(1664455-1664508)
chr8 (296-349)||(1892155-1892208)
chr8 (310-343)||(6496776-6496809)
[»] chr5 (1 HSPs)
chr5 (309-363)||(25720334-25720388)
[»] chr4 (8 HSPs)
chr4 (292-349)||(7367985-7368042)
chr4 (303-348)||(51560221-51560266)
chr4 (296-347)||(8328052-8328103)
chr4 (303-349)||(29126194-29126240)
chr4 (309-351)||(46187838-46187880)
chr4 (304-349)||(3549486-3549531)
chr4 (296-349)||(3639099-3639152)
chr4 (304-349)||(50746069-50746114)
[»] chr3 (2 HSPs)
chr3 (296-369)||(30657372-30657445)
chr3 (309-349)||(25699129-25699169)
[»] chr2 (5 HSPs)
chr2 (292-349)||(14277824-14277881)
chr2 (296-349)||(35809953-35810006)
chr2 (304-349)||(28803461-28803506)
chr2 (296-349)||(36236374-36236427)
chr2 (297-349)||(42852633-42852685)
[»] chr7 (5 HSPs)
chr7 (304-344)||(28165185-28165225)
chr7 (312-349)||(1418521-1418558)
chr7 (296-349)||(24048626-24048679)
chr7 (311-348)||(24363532-24363569)
chr7 (296-348)||(21247586-21247638)
[»] chr1 (3 HSPs)
chr1 (296-348)||(25719757-25719809)
chr1 (296-365)||(32515356-32515425)
chr1 (296-349)||(46504149-46504202)
[»] scaffold0091 (1 HSPs)
scaffold0091 (298-348)||(6020-6070)
[»] scaffold0199 (1 HSPs)
scaffold0199 (296-349)||(6896-6949)


Alignment Details
Target: chr6 (Bit Score: 242; Significance: 1e-134; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 242; E-Value: 1e-134
Query Start/End: Original strand, 113 - 434
Target Start/End: Original strand, 31774276 - 31774591
Alignment:
Q  113 gttgcttgagtggttgtttgtgcatcttataggataagtgtttattatataagctattatgaataagctacaagataaaataaagttaaaatctttcgag 212  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  31774276 gttgcttgagtggttgtttgtgcatcttataggataagtgtttattatataagctattatgaataagctacaagataaaataaagtttaaatctttcgag 31774375  T
Q  213 ataaggtataggttgtttcattagtatcttgaagggttttgaaaataagttgagaatgaacatatcataag----nnnnnnnncatgagctcttccaaag 308  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||            ||||||||||||||||     
T  31774376 ataaggtataggttgtttcattagtatcttgaagggttttgaaaataagttgagaatgaacatatcataagttttttttttttcatgagctcttccaaac 31774475  T
Q  309 agtctcataagtgcttatgccggtagataaactcaaataagataattcatacaggcccctaatatagtattagagtatatccattcaaggccacaaacca 408  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||    
T  31774476 agtctcataagtgcttatgccggtagataaactcaaataagataattcatacaggcccctaatatag----------tatccattcaaggccacaaacca 31774565  T
Q  409 tttatatctacgcaccaagcctgata 434  Q
    ||||||||||||||||||||||||||    
T  31774566 tttatatctacgcaccaagcctgata 31774591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 31774180 - 31774223
Alignment:
Q  18 gattcttggtgttctttttgcggtataattcaacttctatcttg 61  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  31774180 gattcttggtgttctttttgcggtataattcaacttctatcttg 31774223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 299 - 354
Target Start/End: Complemental strand, 26559220 - 26559165
Alignment:
Q  299 tcttccaaagagtctcataagtgcttatgccggtagataaactcaaataagataat 354  Q
    ||||||||| ||||||| || |||||||||| |||| |||||||||||||| ||||    
T  26559220 tcttccaaacagtctcacaaatgcttatgccagtaggtaaactcaaataagttaat 26559165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 2455896 - 2455949
Alignment:
Q  296 agctcttccaaagagtctcataagtgcttatgccggtagataaactcaaataag 349  Q
    |||||||| ||| | ||||  |||||||||||||||||||||| ||||||||||    
T  2455896 agctcttctaaacaatctcgcaagtgcttatgccggtagataagctcaaataag 2455949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 349
Target Start/End: Original strand, 3738200 - 3738240
Alignment:
Q  309 agtctcataagtgcttatgccggtagataaactcaaataag 349  Q
    ||||||| ||||||||||||  |||||||||||||||||||    
T  3738200 agtctcacaagtgcttatgctagtagataaactcaaataag 3738240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 36; Significance: 0.00000000004; HSPs: 9)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 309 - 364
Target Start/End: Complemental strand, 44236794 - 44236739
Alignment:
Q  309 agtctcataagtgcttatgccggtagataaactcaaataagataattcatacaggc 364  Q
    ||||||| ||||||||||||| ||||||||||||||||||| |||| || ||||||    
T  44236794 agtctcacaagtgcttatgccagtagataaactcaaataaggtaatccaaacaggc 44236739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 310 - 364
Target Start/End: Original strand, 7008698 - 7008752
Alignment:
Q  310 gtctcataagtgcttatgccggtagataaactcaaataagataattcatacaggc 364  Q
    |||||| ||||||||||||| |||||||||||||||||||  |||||| ||||||    
T  7008698 gtctcacaagtgcttatgccagtagataaactcaaataagtcaattcaaacaggc 7008752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 349
Target Start/End: Complemental strand, 1889112 - 1889066
Alignment:
Q  303 ccaaagagtctcataagtgcttatgccggtagataaactcaaataag 349  Q
    ||||| ||||||| ||||| ||||||| |||||||||||||||||||    
T  1889112 ccaaacagtctcaaaagtgtttatgccagtagataaactcaaataag 1889066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 348
Target Start/End: Original strand, 5226603 - 5226653
Alignment:
Q  298 ctcttccaaagagtctcataagtgcttatgccggtagataaactcaaataa 348  Q
    |||||||||| ||||||||||||||||||||  ||||||||  ||||||||    
T  5226603 ctcttccaaacagtctcataagtgcttatgcaagtagataagatcaaataa 5226653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 296 - 346
Target Start/End: Original strand, 24326117 - 24326167
Alignment:
Q  296 agctcttccaaagagtctcataagtgcttatgccggtagataaactcaaat 346  Q
    |||||| ||||| ||||||| ||||||||||||| |||||||| |||||||    
T  24326117 agctctcccaaacagtctcacaagtgcttatgccagtagataagctcaaat 24326167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 296 - 366
Target Start/End: Complemental strand, 30191125 - 30191055
Alignment:
Q  296 agctcttccaaagagtctcataagtgcttatgccggtagataaactcaaataagataattcatacaggccc 366  Q
    |||||| ||||| ||||| | |||||||||||||  |||||||||||||||||| | || || ||||||||    
T  30191125 agctctcccaaacagtctaacaagtgcttatgccaatagataaactcaaataagcttatgcaaacaggccc 30191055  T

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Target: chr8; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 1664455 - 1664508
Alignment:
Q  296 agctcttccaaagagtctcataagtgcttatgccggtagataaactcaaataag 349  Q
    |||||| ||||| ||||||| ||||| ||||||  |||||||||||||||||||    
T  1664455 agctctcccaaacagtctcacaagtgtttatgctagtagataaactcaaataag 1664508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 1892208 - 1892155
Alignment:
Q  296 agctcttccaaagagtctcataagtgcttatgccggtagataaactcaaataag 349  Q
    |||||| ||||| | ||||| ||||| ||||| |||||||||||||||||||||    
T  1892208 agctctgccaaacaatctcacaagtgtttatgacggtagataaactcaaataag 1892155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 310 - 343
Target Start/End: Complemental strand, 6496809 - 6496776
Alignment:
Q  310 gtctcataagtgcttatgccggtagataaactca 343  Q
    |||||||||||||||||||| |||||||||||||    
T  6496809 gtctcataagtgcttatgccagtagataaactca 6496776  T

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Target: chr5 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 309 - 363
Target Start/End: Complemental strand, 25720388 - 25720334
Alignment:
Q  309 agtctcataagtgcttatgccggtagataaactcaaataagataattcatacagg 363  Q
    ||||||| ||||||||||||| |||||||| |||||||||| ||||||| |||||    
T  25720388 agtctcacaagtgcttatgccagtagataacctcaaataagctaattcaaacagg 25720334  T

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Target: chr4 (Bit Score: 34; Significance: 0.0000000006; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 292 - 349
Target Start/End: Complemental strand, 7368042 - 7367985
Alignment:
Q  292 catgagctcttccaaagagtctcataagtgcttatgccggtagataaactcaaataag 349  Q
    |||||||||| ||||| ||||||| ||| | ||||||| |||||||||||||||||||    
T  7368042 catgagctctcccaaacagtctcacaagcgtttatgcctgtagataaactcaaataag 7367985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 303 - 348
Target Start/End: Complemental strand, 51560266 - 51560221
Alignment:
Q  303 ccaaagagtctcataagtgcttatgccggtagataaactcaaataa 348  Q
    ||||||||||||||||||||||||||| |||||||| |||| ||||    
T  51560266 ccaaagagtctcataagtgcttatgccagtagataagctcatataa 51560221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 296 - 347
Target Start/End: Complemental strand, 8328103 - 8328052
Alignment:
Q  296 agctcttccaaagagtctcataagtgcttatgccggtagataaactcaaata 347  Q
    |||| ||||||| |||||||||||||||||||||  ||||||| ||||||||    
T  8328103 agctattccaaacagtctcataagtgcttatgccaatagataagctcaaata 8328052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 303 - 349
Target Start/End: Complemental strand, 29126240 - 29126194
Alignment:
Q  303 ccaaagagtctcataagtgcttatgccggtagataaactcaaataag 349  Q
    ||||| ||| || ||||||||||||||||||||||| ||||||||||    
T  29126240 ccaaatagtttcgtaagtgcttatgccggtagataagctcaaataag 29126194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 309 - 351
Target Start/End: Complemental strand, 46187880 - 46187838
Alignment:
Q  309 agtctcataagtgcttatgccggtagataaactcaaataagat 351  Q
    ||||||||||||| ||||||| |||||||| ||||||||||||    
T  46187880 agtctcataagtgtttatgccagtagataagctcaaataagat 46187838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 3549531 - 3549486
Alignment:
Q  304 caaagagtctcataagtgcttatgccggtagataaactcaaataag 349  Q
    |||| |||||||||||||||||||||  |||||||||| |||||||    
T  3549531 caaacagtctcataagtgcttatgccaatagataaactaaaataag 3549486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 3639152 - 3639099
Alignment:
Q  296 agctcttccaaagagtctcataagtgcttatgccggtagataaactcaaataag 349  Q
    |||||||||||| | ||||| | ||||||||| |||||||||| ||||||||||    
T  3639152 agctcttccaaataatctcacaggtgcttatgtcggtagataagctcaaataag 3639099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 349
Target Start/End: Original strand, 50746069 - 50746114
Alignment:
Q  304 caaagagtctcataagtgcttatgccggtagataaactcaaataag 349  Q
    |||| ||||||| ||||||||||||  |||||||||||||||||||    
T  50746069 caaatagtctcacaagtgcttatgcaagtagataaactcaaataag 50746114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 34; Significance: 0.0000000006; HSPs: 2)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 296 - 369
Target Start/End: Original strand, 30657372 - 30657445
Alignment:
Q  296 agctcttccaaagagtctcataagtgcttatgccggtagataaactcaaataagataattcatacaggccccta 369  Q
    |||||||||||| | ||||| ||||||||||| | ||||||||||||||||||   |||||| |||| ||||||    
T  30657372 agctcttccaaacaatctcaaaagtgcttatgtcagtagataaactcaaataaatcaattcaaacagaccccta 30657445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 309 - 349
Target Start/End: Complemental strand, 25699169 - 25699129
Alignment:
Q  309 agtctcataagtgcttatgccggtagataaactcaaataag 349  Q
    ||||||||||||||||||| |  ||||||||||||||||||    
T  25699169 agtctcataagtgcttatgtcaatagataaactcaaataag 25699129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 34; Significance: 0.0000000006; HSPs: 5)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 292 - 349
Target Start/End: Complemental strand, 14277881 - 14277824
Alignment:
Q  292 catgagctcttccaaagagtctcataagtgcttatgccggtagataaactcaaataag 349  Q
    |||||||||||||||| | ||||| |||| |||||| | |||||||||||||||||||    
T  14277881 catgagctcttccaaacactctcacaagtacttatgtccgtagataaactcaaataag 14277824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 35809953 - 35810006
Alignment:
Q  296 agctcttccaaagagtctcataagtgcttatgccggtagataaactcaaataag 349  Q
    |||||| ||||| ||||||| || ||||||||||||||||||| ||||||||||    
T  35809953 agctctcccaaatagtctcacaactgcttatgccggtagataagctcaaataag 35810006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 304 - 349
Target Start/End: Complemental strand, 28803506 - 28803461
Alignment:
Q  304 caaagagtctcataagtgcttatgccggtagataaactcaaataag 349  Q
    |||| ||||||| | |||||||||||||||||||| ||||||||||    
T  28803506 caaacagtctcacatgtgcttatgccggtagataagctcaaataag 28803461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 36236427 - 36236374
Alignment:
Q  296 agctcttccaaagagtctcataagtgcttatgccggtagataaactcaaataag 349  Q
    ||||||| |||| |||||| ||||||||||||| | ||||| ||||||||||||    
T  36236427 agctcttacaaatagtctcgtaagtgcttatgctgatagatgaactcaaataag 36236374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 297 - 349
Target Start/End: Complemental strand, 42852685 - 42852633
Alignment:
Q  297 gctcttccaaagagtctcataagtgcttatgccggtagataaactcaaataag 349  Q
    ||||||||||| ||||||| ||||||||||||| | ||||||  |||||||||    
T  42852685 gctcttccaaacagtctcacaagtgcttatgccagcagataagttcaaataag 42852633  T

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Target: chr7 (Bit Score: 33; Significance: 0.000000003; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 304 - 344
Target Start/End: Original strand, 28165185 - 28165225
Alignment:
Q  304 caaagagtctcataagtgcttatgccggtagataaactcaa 344  Q
    ||||||||||||||||||||||||| ||||||||| |||||    
T  28165185 caaagagtctcataagtgcttatgctggtagataagctcaa 28165225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 312 - 349
Target Start/End: Original strand, 1418521 - 1418558
Alignment:
Q  312 ctcataagtgcttatgccggtagataaactcaaataag 349  Q
    |||||||||||||||||| |||||||| ||||||||||    
T  1418521 ctcataagtgcttatgccagtagataagctcaaataag 1418558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 24048626 - 24048679
Alignment:
Q  296 agctcttccaaagagtctcataagtgcttatgccggtagataaactcaaataag 349  Q
    |||||||||||| |||||  ||||| |||||| | |||||||||||||||||||    
T  24048626 agctcttccaaacagtcttttaagtacttatgtcagtagataaactcaaataag 24048679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 311 - 348
Target Start/End: Complemental strand, 24363569 - 24363532
Alignment:
Q  311 tctcataagtgcttatgccggtagataaactcaaataa 348  Q
    ||||||||||||||||||  ||||||||||||||||||    
T  24363569 tctcataagtgcttatgctagtagataaactcaaataa 24363532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 296 - 348
Target Start/End: Original strand, 21247586 - 21247638
Alignment:
Q  296 agctcttccaaagagtctcataagtgcttatgccggtagataaactcaaataa 348  Q
    ||||||| |||| ||| ||| ||||| |||||| |||||||||||||||||||    
T  21247586 agctcttgcaaacagtttcacaagtggttatgcaggtagataaactcaaataa 21247638  T

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Target: chr1 (Bit Score: 33; Significance: 0.000000003; HSPs: 3)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 296 - 348
Target Start/End: Original strand, 25719757 - 25719809
Alignment:
Q  296 agctcttccaaagagtctcataagtgcttatgccggtagataaactcaaataa 348  Q
    |||||| |||||||||||||||| |||||| ||| ||| ||||||||||||||    
T  25719757 agctctcccaaagagtctcataaatgcttaagccagtaaataaactcaaataa 25719809  T

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Target: chr1; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 365
Target Start/End: Complemental strand, 32515425 - 32515356
Alignment:
Q  296 agctcttccaaagagtctcataagtgcttatgccggtagataaactcaaataagataattcatacaggcc 365  Q
    |||||| ||||| ||||||| |||||||||||   ||||||||||||||||| | |||| || |||||||    
T  32515425 agctctcccaaacagtctcacaagtgcttatgttagtagataaactcaaatatgctaatccaaacaggcc 32515356  T

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Target: chr1; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Complemental strand, 46504202 - 46504149
Alignment:
Q  296 agctcttccaaagagtctcataagtgcttatgccggtagataaactcaaataag 349  Q
    |||||| || || ||||||| || | ||||||||||||||||||||||||||||    
T  46504202 agctctaccgaacagtctcacaaatacttatgccggtagataaactcaaataag 46504149  T

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Target: scaffold0091 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0091
Description:

Target: scaffold0091; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 298 - 348
Target Start/End: Original strand, 6020 - 6070
Alignment:
Q  298 ctcttccaaagagtctcataagtgcttatgccggtagataaactcaaataa 348  Q
    |||||||||| ||||||||||||||||||||  ||||||||  ||||||||    
T  6020 ctcttccaaacagtctcataagtgcttatgcaagtagataagatcaaataa 6070  T

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Target: scaffold0199 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0199
Description:

Target: scaffold0199; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 296 - 349
Target Start/End: Original strand, 6896 - 6949
Alignment:
Q  296 agctcttccaaagagtctcataagtgcttatgccggtagataaactcaaataag 349  Q
    |||||| ||||| ||||||| ||||| ||||||  |||||||||||||||||||    
T  6896 agctctcccaaacagtctcacaagtgtttatgctagtagataaactcaaataag 6949  T

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