View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15713_high_5 (Length: 435)
Name: NF15713_high_5
Description: NF15713
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15713_high_5 |
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Alignment Details
Target: chr8 (Bit Score: 406; Significance: 0; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 406; E-Value: 0
Query Start/End: Original strand, 1 - 418
Target Start/End: Original strand, 32235801 - 32236218
Alignment:
| Q |
1 |
attaactttatgagatatgaattgttgaaacttataaacctatcttcatgtcatatctcgtcaaacatgagactcttaacattgtacttttcctatgatg |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |
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| T |
32235801 |
attaactttatgagatatgaattgttgaaacttataaacctatcttcatgtcatatctcgtcaaacatgagactcttaacattgtacttttcctttgatg |
32235900 |
T |
|
| Q |
101 |
ccaggcctttttatagataggttttaaggagaaatgagataaaaaatctttgacgtctaagtgattcatgttgtgatcagctaatcatcatcataaaagt |
200 |
Q |
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|
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32235901 |
ccaggcctttttatagataggttttaaggagaaatgagataaaaactctttgacgtctaagtgattcatgttgtgatcagctaatcatcatcataaaagt |
32236000 |
T |
|
| Q |
201 |
gatcaactgccaagaggtaacccttgggcgtgttggctctacaatgttctcccctgtgccctcttaattagtatgttccactatggattgggtctgagaa |
300 |
Q |
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|
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32236001 |
gatcaactgccaagaggtaacacttgggcgtgttggctctacaatgttctcccctgtgccctcttaattagtatgttccactatggattgggtctgagaa |
32236100 |
T |
|
| Q |
301 |
aatggaggacaaaaacacagcggaactgcaaaagaagatccttgttttgcttgatgggtcctatatggatttacttatacccttttagttttatgttgtt |
400 |
Q |
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|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
32236101 |
aatggaggacaaaaacacagcggaactgcaaaagaagatccttgttttgcttgatgggtcctatatggatttacttatacccttttagttttatgttgtt |
32236200 |
T |
|
| Q |
401 |
ggttatgaaatttcaact |
418 |
Q |
| |
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|||||||||||||||||| |
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| T |
32236201 |
ggttatgaaatttcaact |
32236218 |
T |
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