View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF15713_high_6 (Length: 403)
Name: NF15713_high_6
Description: NF15713
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15713_high_6 |
 | |
|
Alignment Details
Target: chr8 (Bit Score: 350; Significance: 0; HSPs: 28)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 350; E-Value: 0
Query Start/End: Original strand, 20 - 393
Target Start/End: Complemental strand, 19337362 - 19336989
Alignment:
| Q |
20 |
ggtagcgactgagccaaccgtgaaaccaacgaccaattatgtcctgttttacgattaacacctaacttcatcgttggtaacaaagtgtctacgggagaat |
119 |
Q |
| |
|
|||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19337362 |
ggtagcgaatgagccaaccgtgaaaccaatgaccaattatgtcctgttttacgattaacacctaacttcatcgttggtaacaaagtgtctacgggagaat |
19337263 |
T |
|
| Q |
120 |
caaaactctgccataatatactctttgtcccatttgggtgaagttgttgaagcacaaagttaccggtgtctaacatagtggccacagtgtcgttggttgg |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19337262 |
caaaactctgccataatatactctttgtcccatttgggtgaagctgttgaagcacgaagttaccggtgtctaacatagtggccacagtgtcgttggttgg |
19337163 |
T |
|
| Q |
220 |
ttgaggcgaataataaatgataattggtacattcctattttgaaattctattttgagcacaccagagtagtctagtgatagaactgctgaatctatggct |
319 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19337162 |
ttgaggcgaataataaatgataattggtacattcctattttgaaattctattttgagtacaccagagtagtctagtgatagaactgctgaatctatggct |
19337063 |
T |
|
| Q |
320 |
atgggttgatttctatcgtacatccacactactgcgccgtcaacaccactacttataaccaagtgagcttcttc |
393 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |
|
|
| T |
19337062 |
atgggttgatttctatcgtacatccacactactgcgccgtcaacaccactacttacaaccaagtgagcttcttc |
19336989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 278; E-Value: 1e-155
Query Start/End: Original strand, 24 - 393
Target Start/End: Complemental strand, 19355378 - 19355009
Alignment:
| Q |
24 |
gcgactgagccaaccgtgaaaccaacgaccaattatgtcctgttttacgattaacacctaacttcatcgttggtaacaaagtgtctacgggagaatcaaa |
123 |
Q |
| |
|
|||| |||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||| | |||| | ||| ||| | ||||| |
|
|
| T |
19355378 |
gcgaatgagccaaccgtgaaaccaatgaccaattatgtcctgtttttcgattaacacctaacttcatcgttgggatcaaactatctgttggatagtcaaa |
19355279 |
T |
|
| Q |
124 |
actctgccataatatactctttgtcccatttgggtgaagttgttgaagcacaaagttaccggtgtctaacatagtggccacagtgtcgttggttggttga |
223 |
Q |
| |
|
||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| | |
|
|
| T |
19355278 |
actctgccatagtatactctttgtcccatttgggtgaagttgttgaagcacaaagttacctgtgtctaacatagtggccacagtgtcgttggttggttca |
19355179 |
T |
|
| Q |
224 |
ggcgaataataaatgataattggtacattcctattttgaaattctattttgagcacaccagagtagtctagtgatagaactgctgaatctatggctatgg |
323 |
Q |
| |
|
||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||| |
|
|
| T |
19355178 |
ggcaaataataaatgataatcggtacattcctattttgaaattctattttgagcacaccagagtagtctagtgatagaactgctgaatatatgtctatgg |
19355079 |
T |
|
| Q |
324 |
gttgatttctatcgtacatccacactactgcgccgtcaacaccactacttataaccaagtgagcttcttc |
393 |
Q |
| |
|
||||||||||||| |||||||||||||||| ||| |||| |||||||||||||||||||||||||||||| |
|
|
| T |
19355078 |
gttgatttctatcatacatccacactactgggccatcaaaaccactacttataaccaagtgagcttcttc |
19355009 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 20 - 357
Target Start/End: Original strand, 19504265 - 19504605
Alignment:
| Q |
20 |
ggtagcgactgagccaaccgtgaaaccaacgaccaattatgtcctgttttacgattaacacctaacttcatcgttggtaacaaagtgtctacgggagaat |
119 |
Q |
| |
|
|||||||| ||| ||||| ||||||||| |||||||||||||||||||| |||||||| || ||||||||||||| | |||| ||| | ||| ||| |
|
|
| T |
19504265 |
ggtagcgaaggagtcaaccatgaaaccaatgaccaattatgtcctgtttttcgattaactcccaacttcatcgttgagatcaaaatgtatgttggataat |
19504364 |
T |
|
| Q |
120 |
caaaactctgccataatatactctttgtcccatttgggtgaagttgttgaagcacaaagttaccggtgtctaacatagtggccacagtgtcgttggttgg |
219 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19504365 |
caaaactctgccataatatactctttgtcccatttgggtgaagttgttgaagcacaaagttaccggtgtctaacatagtggccacagtgtcgttggttgg |
19504464 |
T |
|
| Q |
220 |
ttgaggcgaataataaatgataattggtacattcctattttgaaattctattttgagcacaccagagtagtctagtgat---agaactgctgaatctatg |
316 |
Q |
| |
|
|||||||||| | |||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| |||| ||||||| |||||||||| |
|
|
| T |
19504465 |
ttgaggcgaagagtaaatgattattggtaaattcctattttgaaattctattttgagcacaccagagtagtctaatgatagaagaactgatgaatctatg |
19504564 |
T |
|
| Q |
317 |
gctatgggttgatttctatcgtacatccacactactgcgcc |
357 |
Q |
| |
|
||||||||||||||||||| |||||||||||||||||||| |
|
|
| T |
19504565 |
tctatgggttgatttctatcatacatccacactactgcgcc |
19504605 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #4
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 20 - 352
Target Start/End: Complemental strand, 19287623 - 19287291
Alignment:
| Q |
20 |
ggtagcgactgagccaaccgtgaaaccaacgaccaattatgtcctgttttacgattaacacctaacttcatcgttggtaacaaagtgtctacgggagaat |
119 |
Q |
| |
|
|||||||| |||||||||| |||||||||||||||||||||||| ||||| || ||||||||||||||||| ||||| | ||||||| || |||| ||| |
|
|
| T |
19287623 |
ggtagcgaatgagccaaccatgaaaccaacgaccaattatgtccggtttttcggttaacacctaacttcattgttgggatcaaagtggctgtgggataat |
19287524 |
T |
|
| Q |
120 |
caaaactctgccataatatactctttgtcccatttgggtgaagttgttgaagcacaaagttaccggtgtctaacatagtggccacagtgtcgttggttgg |
219 |
Q |
| |
|
|||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| ||||| | ||||| || |
|
|
| T |
19287523 |
caaaactctgccataatatattctttgtcccatttgggtgaattttttgaagcacaaagttaccggtgtctaacatagtggcgacagtattattggtcgg |
19287424 |
T |
|
| Q |
220 |
ttgaggcgaataataaatgataattggtacattcctattttgaaattctattttgagcacaccagagtagtctagtgatagaactgctgaatctatggct |
319 |
Q |
| |
|
||||||||| | ||||||||||| |||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||| |||| || | | |
|
|
| T |
19287423 |
atgaggcgaagagtaaatgataatcggtaatttcctattttgagattctattttgagcacaccagagtagtctaatgatagaactgcggaatttaagtca |
19287324 |
T |
|
| Q |
320 |
atgggttgatttctatcgtacatccacactact |
352 |
Q |
| |
|
|||| ||||||||||| | ||||||||||||| |
|
|
| T |
19287323 |
atggaatgatttctatcatgcatccacactact |
19287291 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #5
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 40 - 357
Target Start/End: Complemental strand, 19345058 - 19344744
Alignment:
| Q |
40 |
tgaaaccaacgaccaattatgtcctgttttacgattaacacctaacttcatcgttggtaacaaagtgtctacgggagaatcaaaactctgccataatata |
139 |
Q |
| |
|
||||||||| |||||||||||||| ||||| |||||||| || |||||||||||||| | |||||||| ||||| ||||||||||||||||||||| | |
|
|
| T |
19345058 |
tgaaaccaatgaccaattatgtccagtttttcgattaactcccaacttcatcgttgggatcaaagtgtgatcgggataatcaaaactctgccataataaa |
19344959 |
T |
|
| Q |
140 |
ctctttgtcccatttgggtgaagttgttgaagcacaaagttaccggtgtctaacatagtggccacagtgtcgttggttggttgaggcgaataataaatga |
239 |
Q |
| |
|
|| ||||||||||||||||||| ||||||||||||||||||||| |||||||| |||||||||| ||||| ||| | |||||||| || | ||||||| |
|
|
| T |
19344958 |
ctatttgtcccatttgggtgaaattgttgaagcacaaagttacctgtgtctaatatagtggccaaagtgttgtttatgggttgaggtgacgagtaaatga |
19344859 |
T |
|
| Q |
240 |
taattggtacattcctattttgaaattctattttgagcacaccagagtagtctagtgatagaactgctgaatctatggctatgggttgatttctatcgta |
339 |
Q |
| |
|
| |||||| |||||||||| |||||||||||||||||||||| || |||||||||||||||||||||| || | | |||| ||||||||||| || |
|
|
| T |
19344858 |
ttattggt---ttcctattttatgattctattttgagcacaccagaataatctagtgatagaactgctgaatttaagtcaatggaatgatttctatcata |
19344762 |
T |
|
| Q |
340 |
catccacactactgcgcc |
357 |
Q |
| |
|
|||||||||||||||||| |
|
|
| T |
19344761 |
catccacactactgcgcc |
19344744 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #6
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 40 - 353
Target Start/End: Original strand, 19469728 - 19470041
Alignment:
| Q |
40 |
tgaaaccaacgaccaattatgtcctgttttacgattaacacctaacttcatcgttggtaacaaagtgtctacgggagaatcaaaactctgccataatata |
139 |
Q |
| |
|
||||||||| ||||| |||||||| ||||| |||||||| || ||||||||| |||| | ||| |||| |||| |||| |||||||||||||||||| |
|
|
| T |
19469728 |
tgaaaccaatgaccatttatgtccagtttttcgattaactcccaacttcatcattgggatcaatacgtctgtgggataatcgaaactctgccataatata |
19469827 |
T |
|
| Q |
140 |
ctctttgtcccatttgggtgaagttgttgaagcacaaagttaccggtgtctaacatagtggccacagtgtcgttggttggttgaggcgaataataaatga |
239 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||| |||||| |||||||| ||| | ||||||| |
|
|
| T |
19469828 |
ctctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaaaatagtggccatagtgttgttggtaggttgaggtgaagagtaaatga |
19469927 |
T |
|
| Q |
240 |
taattggtacattcctattttgaaattctattttgagcacaccagagtagtctagtgatagaactgctgaatctatggctatgggttgatttctatcgta |
339 |
Q |
| |
|
| ||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||| ||||| || || | | | |||| |||||| |||| || |
|
|
| T |
19469928 |
ttattggtaatttcctattttgagattctattttgagcacaccagagtagtctagtaataaaactgatgtattaaagtcaatggaatgatttatatcata |
19470027 |
T |
|
| Q |
340 |
catccacactactg |
353 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
19470028 |
catccacactactg |
19470041 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #7
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 40 - 353
Target Start/End: Original strand, 19540652 - 19540965
Alignment:
| Q |
40 |
tgaaaccaacgaccaattatgtcctgttttacgattaacacctaacttcatcgttggtaacaaagtgtctacgggagaatcaaaactctgccataatata |
139 |
Q |
| |
|
||||||||| ||||| |||||||| ||||| |||||||| || ||||||||| |||| | ||| |||| |||| |||| |||||||||||||||||| |
|
|
| T |
19540652 |
tgaaaccaatgaccatttatgtccagtttttcgattaactcccaacttcatcattgggatcaatacgtctgtgggataatcgaaactctgccataatata |
19540751 |
T |
|
| Q |
140 |
ctctttgtcccatttgggtgaagttgttgaagcacaaagttaccggtgtctaacatagtggccacagtgtcgttggttggttgaggcgaataataaatga |
239 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||| |||||| |||||||| ||| | ||||||| |
|
|
| T |
19540752 |
ctctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaaaatagtggccatagtgttgttggtaggttgaggtgaagagtaaatga |
19540851 |
T |
|
| Q |
240 |
taattggtacattcctattttgaaattctattttgagcacaccagagtagtctagtgatagaactgctgaatctatggctatgggttgatttctatcgta |
339 |
Q |
| |
|
| ||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||| ||||| || || | | | |||| |||||| |||| || |
|
|
| T |
19540852 |
ttattggtaatttcctattttgagattctattttgagcacaccagagtagtctagtaataaaactgatgtattaaagtcaatggaatgatttatatcata |
19540951 |
T |
|
| Q |
340 |
catccacactactg |
353 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
19540952 |
catccacactactg |
19540965 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #8
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 40 - 353
Target Start/End: Complemental strand, 19592046 - 19591733
Alignment:
| Q |
40 |
tgaaaccaacgaccaattatgtcctgttttacgattaacacctaacttcatcgttggtaacaaagtgtctacgggagaatcaaaactctgccataatata |
139 |
Q |
| |
|
||||||||| ||||| |||||||| ||||| |||||||| || ||||||||| |||| | ||| |||| |||| |||| |||||||||||||||||| |
|
|
| T |
19592046 |
tgaaaccaatgaccatttatgtccagtttttcgattaactcccaacttcatcattgggatcaatacgtctgtgggataatcgaaactctgccataatata |
19591947 |
T |
|
| Q |
140 |
ctctttgtcccatttgggtgaagttgttgaagcacaaagttaccggtgtctaacatagtggccacagtgtcgttggttggttgaggcgaataataaatga |
239 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||| ||||| |||||| |||||||| ||| | ||||||| |
|
|
| T |
19591946 |
ctctttgtcccatttgggtgaagttgttgaagcacaaagttacccgtgtctaaaatagtggccatagtgttgttggtaggttgaggtgaagagtaaatga |
19591847 |
T |
|
| Q |
240 |
taattggtacattcctattttgaaattctattttgagcacaccagagtagtctagtgatagaactgctgaatctatggctatgggttgatttctatcgta |
339 |
Q |
| |
|
| ||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||| ||||| || || | | | |||| |||||| |||| || |
|
|
| T |
19591846 |
ttattggtaatttcctattttgagattctattttgagcacaccagagtagtctagtaataaaactgatgtattaaagtcaatggaatgatttatatcata |
19591747 |
T |
|
| Q |
340 |
catccacactactg |
353 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
19591746 |
catccacactactg |
19591733 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #9
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 43 - 332
Target Start/End: Complemental strand, 19390477 - 19390191
Alignment:
| Q |
43 |
aaccaacgaccaattatgtcctgttttacgattaacacctaacttcatcgttggtaacaaagtgtctacgggagaatcaaaactctgccataatatactc |
142 |
Q |
| |
|
|||||| |||||||||||||||||||| |||||||| || |||||||||||||| | ||||||||| ||||| ||||||||||||||||||||| |||| |
|
|
| T |
19390477 |
aaccaatgaccaattatgtcctgtttttcgattaactcccaacttcatcgttgggatcaaagtgtcgtcgggataatcaaaactctgccataataaactc |
19390378 |
T |
|
| Q |
143 |
tttgtcccatttgggtgaagttgttgaagcacaaagttaccggtgtctaacatagtggccacagtgtcgttggttggttgaggcgaataataaatgataa |
242 |
Q |
| |
|
||||| ||||||||||||| || |||||||||||||||||||||||||| |||||| |||| ||||| ||| | |||||||| ||| | |||||||| | |
|
|
| T |
19390377 |
tttgtaccatttgggtgaaatttttgaagcacaaagttaccggtgtctagcatagttgccatagtgttgtttatgggttgaggtgaagagtaaatgatta |
19390278 |
T |
|
| Q |
243 |
ttggtacattcctattttgaaattctattttgagcacaccagagtagtctagtgatagaactgctgaatctatggctatgggttgatttc |
332 |
Q |
| |
|
||||| |||||||||||| ||||||||||||||||||||| ||||| || ||||| ||||||||| | || | ||| ||||||||||| |
|
|
| T |
19390277 |
ttggt---ttcctattttgagattctattttgagcacaccagtgtagtttaatgataaaactgctgagtttacgtctacgggttgatttc |
19390191 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #10
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 40 - 353
Target Start/End: Original strand, 19468792 - 19469102
Alignment:
| Q |
40 |
tgaaaccaacgaccaattatgtcctgttttacgattaacacctaacttcatcgttggtaacaaagtgtctacgggagaatcaaaactctgccataatata |
139 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||| | ||||||||| ||||| |||||||||||||||| || | | |
|
|
| T |
19468792 |
tgaaaccaatgaccaattatgtcctgttttccgattaacgcctaacttcatcgttggaaccaaagtgtcatcgggataatcaaaactctgccacaacaca |
19468891 |
T |
|
| Q |
140 |
ctctttgtcccatttgggtgaagttgttgaagcacaaagttaccggtgtctaacatagtggccacagtgtcgttggttggttgaggcgaataataaatga |
239 |
Q |
| |
|
||| ||| ||||| || |||| |||| |||||||||||||||| |||||||| |||||||||| ||||| ||| | |||||||| ||| | ||||||| |
|
|
| T |
19468892 |
ctcattgagccattgggatgaaattgtcgaagcacaaagttacctgtgtctaatatagtggccatagtgttgtttatgggttgaggtgaagagtaaatga |
19468991 |
T |
|
| Q |
240 |
taattggtacattcctattttgaaattctattttgagcacaccagagtagtctagtgatagaactgctgaatctatggctatgggttgatttctatcgta |
339 |
Q |
| |
|
| |||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| || | | |||| |||||| |||| || |
|
|
| T |
19468992 |
ttattggt---ttcctattttgtgattctattttgagcacaccagagtagtctaatgatagaactgctgaatttaagtcaatggaatgatttatatcata |
19469088 |
T |
|
| Q |
340 |
catccacactactg |
353 |
Q |
| |
|
|||||||||||||| |
|
|
| T |
19469089 |
catccacactactg |
19469102 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #11
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 44 - 348
Target Start/End: Complemental strand, 19376502 - 19376201
Alignment:
| Q |
44 |
accaacgaccaattatgtcctgttttacgattaacacctaacttcatcgttggtaacaaagtgtctacgggagaatcaaaactctgccataatatactct |
143 |
Q |
| |
|
||||| |||||||||| ||||||||| |||||||| ||||||||||||||||| | |||| |||| ||| |||||||||||||||| || | | ||| |
|
|
| T |
19376502 |
accaatgaccaattatatcctgtttttcgattaacgcctaacttcatcgttgggatcaaaacgtctgatggataatcaaaactctgccacaaaacagtct |
19376403 |
T |
|
| Q |
144 |
ttgtcccatttgggtgaagttgttgaagcacaaagttaccggtgtctaacatagtggccacagtgtcgttggttggttgaggcgaataataaatgataat |
243 |
Q |
| |
|
||| |||||| || |||| ||||||||||||||||||||| |||||||| |||||||||| ||||| ||| |||||||||| ||| | |||||||| || |
|
|
| T |
19376402 |
ttgacccattgggatgaaattgttgaagcacaaagttacctgtgtctaatatagtggccaaagtgttgtttattggttgaggtgaagagtaaatgattat |
19376303 |
T |
|
| Q |
244 |
tggtacattcctattttgaaattctattttgagcacaccagagtagtctagtgatagaactgctgaatctatggctatgggttgatttctatcgtacatc |
343 |
Q |
| |
|
|||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | | |||| ||||||||||| |||||| |
|
|
| T |
19376302 |
tggt---ttcctattttgtgattctattttgagcacaccagagtagtctagtgatagaactgctgaatctaagtcaatggaatgatttctatcatacatc |
19376206 |
T |
|
| Q |
344 |
cacac |
348 |
Q |
| |
|
||||| |
|
|
| T |
19376205 |
cacac |
19376201 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #12
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 40 - 350
Target Start/End: Original strand, 19555713 - 19556020
Alignment:
| Q |
40 |
tgaaaccaacgaccaattatgtcctgttttacgattaacacctaacttcatcgttggtaacaaagtgtctacgggagaatcaaaactctgccataatata |
139 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||| ||||||||||||||||| | ||||||||| ||||| |||||||||||||||| || | | |
|
|
| T |
19555713 |
tgaaaccaatgaccaattatgtcctgttttccgattaacgcctaacttcatcgttggaaccaaagtgtcatcgggataatcaaaactctgccacaacaca |
19555812 |
T |
|
| Q |
140 |
ctctttgtcccatttgggtgaagttgttgaagcacaaagttaccggtgtctaacatagtggccacagtgtcgttggttggttgaggcgaataataaatga |
239 |
Q |
| |
|
||| ||| ||||| || |||| |||| |||||||||||||||| |||||||| |||||||||| ||||| ||| | |||||||| ||| | ||||||| |
|
|
| T |
19555813 |
ctcattgagccattgggatgaaattgtcgaagcacaaagttacctgtgtctaatatagtggccatagtgttgtttatgggttgaggtgaagagtaaatga |
19555912 |
T |
|
| Q |
240 |
taattggtacattcctattttgaaattctattttgagcacaccagagtagtctagtgatagaactgctgaatctatggctatgggttgatttctatcgta |
339 |
Q |
| |
|
| |||||| ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| || | | |||| |||||| |||| || |
|
|
| T |
19555913 |
ttattggt---ttcctattttgtgattctattttgagcacaccagagtagtctaatgatagaactgctgaatttaagtcaatggaatgatttatatcata |
19556009 |
T |
|
| Q |
340 |
catccacacta |
350 |
Q |
| |
|
||||||||||| |
|
|
| T |
19556010 |
catccacacta |
19556020 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #13
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 20 - 357
Target Start/End: Original strand, 19173023 - 19173354
Alignment:
| Q |
20 |
ggtagcgactgagccaaccgtgaaaccaacgaccaattatgtcctgttttacgattaacacctaacttcatcgttggtaacaaagtgtctacgggagaat |
119 |
Q |
| |
|
|||||||| ||||||||| |||||||| |||||||||||||| ||||| || ||||||||||||||||||||||| | ||||||| || |||| ||| |
|
|
| T |
19173023 |
ggtagcgaaggagccaaccacgaaaccaatgaccaattatgtccggtttttcggttaacacctaacttcatcgttgggatcaaagtggttatgggataat |
19173122 |
T |
|
| Q |
120 |
caaaactctgccataatatactctttgtcccatttgggtgaagttgttgaagcacaaagttaccggtgtctaacatagtggccacagtgtcgttggttgg |
219 |
Q |
| |
|
||||||||||||||||||||||||||||||| || |||| || |||| |||||||||||||||| |||||||| |||||||||| ||| ||| | || |
|
|
| T |
19173123 |
caaaactctgccataatatactctttgtcccgttggggtaaatttgtcgaagcacaaagttacctgtgtctaatatagtggccaaagt---gtttatggg |
19173219 |
T |
|
| Q |
220 |
ttgaggcgaataataaatgataattggtacattcctattttgaaattctattttgagcacaccagagtagtctagtgatagaactgctgaatctatggct |
319 |
Q |
| |
|
|||||| ||| | | ||||| |||||| ||||||||||| ||| |||||||||||||||||| || |||||||| ||||||||||||| || | | |
|
|
| T |
19173220 |
ttgaggtgaagagcatatgattattggt---ttcctattttgtgattgtattttgagcacaccagaataatctagtgaaagaactgctgaatttaagtca |
19173316 |
T |
|
| Q |
320 |
atgggttgatttctatcgtacatccacactactgcgcc |
357 |
Q |
| |
|
|||| ||||||||||| |||||||||||||||||||| |
|
|
| T |
19173317 |
atggaatgatttctatcatacatccacactactgcgcc |
19173354 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #14
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 35 - 357
Target Start/End: Complemental strand, 19404642 - 19404323
Alignment:
| Q |
35 |
aaccgtgaaaccaacgaccaattatgtcctgttttacgattaacacctaacttcatcgttggtaacaaagtgtctacgggagaatcaaaactctgccata |
134 |
Q |
| |
|
|||| ||| ||||| |||||||||||| ||||||| |||||||| ||||||||||||||||| | |||| |||| || |||||||||||||||| | |
|
|
| T |
19404642 |
aaccatgacaccaatgaccaattatgtgctgtttttcgattaactcctaacttcatcgttgggatcaaaacgtctgatgggtaatcaaaactctgccaca |
19404543 |
T |
|
| Q |
135 |
atatactctttgtcccatttgggtgaagttgttgaagcacaaagttaccggtgtctaacatagtggccacagtgtcgttggttggttgaggcgaataata |
234 |
Q |
| |
|
| | | |||||| |||||| ||||||| |||| |||||||||||||||| |||||||| ||||| |||| ||||| ||| | |||||||| ||| |||| |
|
|
| T |
19404542 |
acacagtctttgacccattggggtgaaattgtcgaagcacaaagttacctgtgtctaatatagtagccaaagtgttgtttatgggttgaggtgaagaata |
19404443 |
T |
|
| Q |
235 |
aatgataattggtacattcctattttgaaattctattttgagcacaccagagtagtctagtgatagaactgctgaatctatggctatgggttgatttcta |
334 |
Q |
| |
|
||||||||||||| |||||| |||| ||||||||||||||||||| ||||||||||| ||||||||||||||||||| | | |||| ||||||||| |
|
|
| T |
19404442 |
aatgataattggt---ttcctactttgtgattctattttgagcacaccggagtagtctagcgatagaactgctgaatctaagtcaatggaatgatttcta |
19404346 |
T |
|
| Q |
335 |
tcgtacatccacactactgcgcc |
357 |
Q |
| |
|
|| |||||||| ||||||||||| |
|
|
| T |
19404345 |
tcatacatccatactactgcgcc |
19404323 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #15
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 40 - 305
Target Start/End: Complemental strand, 19410696 - 19410434
Alignment:
| Q |
40 |
tgaaaccaacgaccaattatgtcctgttttacgattaacacctaacttcatcgttggtaacaaagtgtctacgggagaatcaaaactctgccataatata |
139 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||| |||||||||||| |||| | |||| |||| ||| |||||||||||||||| || | | |
|
|
| T |
19410696 |
tgaaaccaatgaccaattatgtcctgtttttcgattaacgcctaacttcatcattgggatcaaaacgtctgatggataatcaaaactctgccacaacaca |
19410597 |
T |
|
| Q |
140 |
ctctttgtcccatttgggtgaagttgttgaagcacaaagttaccggtgtctaacatagtggccacagtgtcgttggttggttgaggcgaataataaatga |
239 |
Q |
| |
|
||| ||| || || || ||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||| ||| | ||||||| |
|
|
| T |
19410596 |
ctcattgagccgttgggaagaaattgttgaagcacaaagttaccggcgtctaacatagtggccacagtgttgttggtaggttgaggtgaagagtaaatga |
19410497 |
T |
|
| Q |
240 |
taattggtacattcctattttgaaattctattttgagcacaccagagtagtctagtgatagaactg |
305 |
Q |
| |
|
| |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19410496 |
ttattggt---ttcctattttgagattctattttgagcacaccagagtagtctagtgatagaactg |
19410434 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #16
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 40 - 305
Target Start/End: Complemental strand, 19457715 - 19457453
Alignment:
| Q |
40 |
tgaaaccaacgaccaattatgtcctgttttacgattaacacctaacttcatcgttggtaacaaagtgtctacgggagaatcaaaactctgccataatata |
139 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||| |||||||||||| |||| | |||| |||| ||| |||||||||||||||| || | | |
|
|
| T |
19457715 |
tgaaaccaatgaccaattatgtcctgtttttcgattaacgcctaacttcatcattgggatcaaaacgtctgatggataatcaaaactctgccacaacaca |
19457616 |
T |
|
| Q |
140 |
ctctttgtcccatttgggtgaagttgttgaagcacaaagttaccggtgtctaacatagtggccacagtgtcgttggttggttgaggcgaataataaatga |
239 |
Q |
| |
|
||| ||| || || || ||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||| ||| | ||||||| |
|
|
| T |
19457615 |
ctcattgagccgttgggaagaaattgttgaagcacaaagttaccggcgtctaacatagtggccacagtgttgttggtaggttgaggtgaagagtaaatga |
19457516 |
T |
|
| Q |
240 |
taattggtacattcctattttgaaattctattttgagcacaccagagtagtctagtgatagaactg |
305 |
Q |
| |
|
| |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19457515 |
ttattggt---ttcctattttgagattctattttgagcacaccagagtagtctagtgatagaactg |
19457453 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #17
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 40 - 305
Target Start/End: Original strand, 19523363 - 19523625
Alignment:
| Q |
40 |
tgaaaccaacgaccaattatgtcctgttttacgattaacacctaacttcatcgttggtaacaaagtgtctacgggagaatcaaaactctgccataatata |
139 |
Q |
| |
|
||||||||| |||||||||||||||||||| |||||||| |||||||||||| |||| | |||| |||| ||| |||||||||||||||| || | | |
|
|
| T |
19523363 |
tgaaaccaatgaccaattatgtcctgtttttcgattaacgcctaacttcatcattgggatcaaaacgtctgatggataatcaaaactctgccacaacaca |
19523462 |
T |
|
| Q |
140 |
ctctttgtcccatttgggtgaagttgttgaagcacaaagttaccggtgtctaacatagtggccacagtgtcgttggttggttgaggcgaataataaatga |
239 |
Q |
| |
|
||| ||| || || || ||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||| |||||||| ||| | ||||||| |
|
|
| T |
19523463 |
ctcattgagccgttgggaagaaattgttgaagcacaaagttaccggcgtctaacatagtggccacagtgttgttggtaggttgaggtgaagagtaaatga |
19523562 |
T |
|
| Q |
240 |
taattggtacattcctattttgaaattctattttgagcacaccagagtagtctagtgatagaactg |
305 |
Q |
| |
|
| |||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19523563 |
ttattggt---ttcctattttgagattctattttgagcacaccagagtagtctagtgatagaactg |
19523625 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #18
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 20 - 336
Target Start/End: Complemental strand, 19448423 - 19448110
Alignment:
| Q |
20 |
ggtagcgactgagccaaccgtgaaaccaacgaccaattatgtcctgttttacgattaacacctaacttcatcgttggtaacaaagtgtctacgggagaat |
119 |
Q |
| |
|
|||||||| ||| ||||| ||| ||||| |||||||||||||||||||| ||||||| ||||||||||||||||| | |||| |||| ||| ||| |
|
|
| T |
19448423 |
ggtagcgaaggagtcaaccatgacaccaatgaccaattatgtcctgttttttgattaacgcctaacttcatcgttgggatcaaaacgtctgatggataat |
19448324 |
T |
|
| Q |
120 |
caaaactctgccataatatactctttgtcccatttgggtgaagttgttgaagcacaaagttaccggtgtctaacatagtggccacagtgtcgttggttgg |
219 |
Q |
| |
|
||||||||||||| || | | |||||| |||||| ||||||| ||||||||||||||||||||| |||||||| |||||||||| ||||| ||| | || |
|
|
| T |
19448323 |
caaaactctgccacaacacagtctttgacccattggggtgaaattgttgaagcacaaagttacctgtgtctaatatagtggccaaagtgttgtttatggg |
19448224 |
T |
|
| Q |
220 |
ttgaggcgaataataaatgataattggtacattcctattttgaaattctattttgagcacaccagagtagtctagtgatagaactgctgaatctatggct |
319 |
Q |
| |
|
|||||| ||| | |||||||| |||||| ||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||| || | | |
|
|
| T |
19448223 |
ttgaggtgaagagtaaatgattattggt---ttcctattttgtgattctattttgagcacaccagaataatctagtgatagaactgctgaatttaagtca |
19448127 |
T |
|
| Q |
320 |
atgggttgatttctatc |
336 |
Q |
| |
|
|||| ||||||||||| |
|
|
| T |
19448126 |
atggaatgatttctatc |
19448110 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #19
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 20 - 336
Target Start/End: Original strand, 19532653 - 19532966
Alignment:
| Q |
20 |
ggtagcgactgagccaaccgtgaaaccaacgaccaattatgtcctgttttacgattaacacctaacttcatcgttggtaacaaagtgtctacgggagaat |
119 |
Q |
| |
|
|||||||| ||| ||||| ||| ||||| |||||||||||||||||||| ||||||| ||||||||||||||||| | |||| |||| ||| ||| |
|
|
| T |
19532653 |
ggtagcgaaggagtcaaccatgacaccaatgaccaattatgtcctgttttttgattaacgcctaacttcatcgttgggatcaaaacgtctgatggataat |
19532752 |
T |
|
| Q |
120 |
caaaactctgccataatatactctttgtcccatttgggtgaagttgttgaagcacaaagttaccggtgtctaacatagtggccacagtgtcgttggttgg |
219 |
Q |
| |
|
||||||||||||| || | | |||||| |||||| ||||||| ||||||||||||||||||||| |||||||| |||||||||| ||||| ||| | || |
|
|
| T |
19532753 |
caaaactctgccacaacacagtctttgacccattggggtgaaattgttgaagcacaaagttacctgtgtctaatatagtggccaaagtgttgtttatggg |
19532852 |
T |
|
| Q |
220 |
ttgaggcgaataataaatgataattggtacattcctattttgaaattctattttgagcacaccagagtagtctagtgatagaactgctgaatctatggct |
319 |
Q |
| |
|
|||||| ||| | |||||||| |||||| ||||||||||| |||||||||||||||||||||| || |||||||||||||||||||||| || | | |
|
|
| T |
19532853 |
ttgaggtgaagagtaaatgattattggt---ttcctattttgtgattctattttgagcacaccagaataatctagtgatagaactgctgaatttaagtca |
19532949 |
T |
|
| Q |
320 |
atgggttgatttctatc |
336 |
Q |
| |
|
|||| ||||||||||| |
|
|
| T |
19532950 |
atggaatgatttctatc |
19532966 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #20
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 144 - 349
Target Start/End: Complemental strand, 19489886 - 19489684
Alignment:
| Q |
144 |
ttgtcccatttgggtgaagttgttgaagcacaaagttaccggtgtctaacatagtggccacagtgtcgttggttggttgaggcgaataataaatgataat |
243 |
Q |
| |
|
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||| |||| |||||| ||||||| || | |||||||| || |
|
|
| T |
19489886 |
ttgtcccatttgggtgaagttgttgaatcaccaagttaccggtgtctaacatagtggccaccgtgttgttggtgggttgagttgacaagtaaatgattat |
19489787 |
T |
|
| Q |
244 |
tggtacattcctattttgaaattctattttgagcacaccagagtagtctagtgatagaactgctgaatctatggctatgggttgatttctatcgtacatc |
343 |
Q |
| |
|
|||| ||||||||||| |||||||||||||| ||||||||||| ||||||||| ||||||||| | || | ||| |||||||||||||| ||||| |
|
|
| T |
19489786 |
tggt---ttcctattttgtgattctattttgagcgcaccagagtaggctagtgataaaactgctgattttacgtctacgggttgatttctattacacatc |
19489690 |
T |
|
| Q |
344 |
cacact |
349 |
Q |
| |
|
|||||| |
|
|
| T |
19489689 |
cacact |
19489684 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #21
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 255 - 350
Target Start/End: Original strand, 19458247 - 19458342
Alignment:
| Q |
255 |
tattttgaaattctattttgagcacaccagagtagtctagtgatagaactgctgaatctatggctatgggttgatttctatcgtacatccacacta |
350 |
Q |
| |
|
||||||| |||||||||||||||||||||||||||||| ||||||||||||||||| || | | |||| |||||| |||| ||||||||||||| |
|
|
| T |
19458247 |
tattttgtgattctattttgagcacaccagagtagtctaatgatagaactgctgaatttaagtcaatggaatgatttatatcatacatccacacta |
19458342 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 264 - 350
Target Start/End: Original strand, 19468184 - 19468270
Alignment:
| Q |
264 |
attctattttgagcacaccagagtagtctagtgatagaactgctgaatctatggctatgggttgatttctatcgtacatccacacta |
350 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||||||||||||||| || | | |||| |||||| |||| ||||||||||||| |
|
|
| T |
19468184 |
attctattttgagcacaccagagtagtctaatgatagaactgctgaatttaagtcaatggaatgatttatatcatacatccacacta |
19468270 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 264 - 311
Target Start/End: Complemental strand, 19185115 - 19185068
Alignment:
| Q |
264 |
attctattttgagcacaccagagtagtctagtgatagaactgctgaat |
311 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
19185115 |
attctattttgagcacaccagagtagtctagtgatagaactgctgaat |
19185068 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #24
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 264 - 311
Target Start/End: Complemental strand, 16004341 - 16004294
Alignment:
| Q |
264 |
attctattttgagcacaccagagtagtctagtgatagaactgctgaat |
311 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||| ||||||| |
|
|
| T |
16004341 |
attctattttgagcacaccagagtagtctagtgatagaacagctgaat |
16004294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 264 - 311
Target Start/End: Original strand, 15984426 - 15984473
Alignment:
| Q |
264 |
attctattttgagcacaccagagtagtctagtgatagaactgctgaat |
311 |
Q |
| |
|
|||||||||| |||||||||||||||| ||||||||||| |||||||| |
|
|
| T |
15984426 |
attctatttttagcacaccagagtagtttagtgatagaattgctgaat |
15984473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 311
Target Start/End: Complemental strand, 15952819 - 15952772
Alignment:
| Q |
264 |
attctattttgagcacaccagagtagtctagtgatagaactgctgaat |
311 |
Q |
| |
|
|||||||||| |||||||||||||||| |||||||||| |||||||| |
|
|
| T |
15952819 |
attctatttttagcacaccagagtagtttagtgatagatttgctgaat |
15952772 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 311
Target Start/End: Original strand, 15977629 - 15977676
Alignment:
| Q |
264 |
attctattttgagcacaccagagtagtctagtgatagaactgctgaat |
311 |
Q |
| |
|
|||||||||| |||| |||||||| || |||||||||||||||||||| |
|
|
| T |
15977629 |
attctatttttagcataccagagttgtttagtgatagaactgctgaat |
15977676 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 264 - 311
Target Start/End: Original strand, 19151226 - 19151273
Alignment:
| Q |
264 |
attctattttgagcacaccagagtagtctagtgatagaactgctgaat |
311 |
Q |
| |
|
|||||||||| |||||||||||||||| |||||||||| |||||||| |
|
|
| T |
19151226 |
attctatttttagcacaccagagtagtttagtgatagacttgctgaat |
19151273 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr1 (Bit Score: 146; Significance: 8e-77; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 146; E-Value: 8e-77
Query Start/End: Original strand, 34 - 313
Target Start/End: Original strand, 36314873 - 36315149
Alignment:
| Q |
34 |
caaccgtgaaaccaacgaccaattatgtcctgttttacgattaacacctaacttcatcgttggtaacaaagtgtctacgggagaatcaaaactctgccat |
133 |
Q |
| |
|
||||| ||||||||| |||||||||||||||||||| |||||||| || |||||||||||||| | |||| || | |||| ||||||||||||||||| |
|
|
| T |
36314873 |
caaccatgaaaccaatgaccaattatgtcctgtttttcgattaactcccaacttcatcgttgggatcaaaaagtttgtgggataatcaaaactctgccat |
36314972 |
T |
|
| Q |
134 |
aatatactctttgtcccatttgggtgaagttgttgaagcacaaagttaccggtgtctaacatagtggccacagtgtcgttggttggttgaggcgaataat |
233 |
Q |
| |
|
||||||||||||||||||||||||| |||||||||||||| ||||||||| ||||||||||||||||||||||||| |||| | |||||||| ||| | |
|
|
| T |
36314973 |
aatatactctttgtcccatttgggtaaagttgttgaagcaaaaagttacccgtgtctaacatagtggccacagtgttgttgttgggttgaggtgaagtgt |
36315072 |
T |
|
| Q |
234 |
aaatgataattggtacattcctattttgaaattctattttgagcacaccagagtagtctagtgatagaactgctgaatct |
313 |
Q |
| |
|
||||||| |||||| ||||||| |||| ||||||||||||| ||||||||||| |||||||||| ||||| ||||||| |
|
|
| T |
36315073 |
aaatgatcattggt---ttcctatcttgacattctattttgagaacaccagagtaatctagtgataaaactgttgaatct |
36315149 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6 (Bit Score: 45; Significance: 2e-16; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 40 - 192
Target Start/End: Complemental strand, 19542955 - 19542803
Alignment:
| Q |
40 |
tgaaaccaacgaccaattatgtcctgttttacgattaacacctaacttcatcgttggtaacaaagtgtctacgggagaatcaaaactctgccataatata |
139 |
Q |
| |
|
|||||| || |||||||||||||| ||| | || |||| ||||||||||||| |||| | | || || || | || |||||||||||||||||| | | |
|
|
| T |
19542955 |
tgaaactaaagaccaattatgtccggttattcggttaatacctaacttcatcattggaatccaacagtgtaagagatgatcaaaactctgccataaaaca |
19542856 |
T |
|
| Q |
140 |
ctctttgtcccatttgggtgaagttgttgaagcacaaagttaccggtgtctaa |
192 |
Q |
| |
|
|| ||| ||||| ||||||| ||||||||| |||||||||||||||||||| |
|
|
| T |
19542855 |
cttgttgaaccattggggtgaaattgttgaagaacaaagttaccggtgtctaa |
19542803 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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