View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF15714_high_5 (Length: 384)

Name: NF15714_high_5
Description: NF15714
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF15714_high_5
NF15714_high_5
[»] chr6 (17 HSPs)
chr6 (15-368)||(32449690-32450040)
chr6 (15-276)||(34636707-34636969)
chr6 (15-208)||(23260075-23260267)
chr6 (15-247)||(24164335-24164573)
chr6 (15-330)||(13772833-13773168)
chr6 (194-276)||(10751164-10751246)
chr6 (15-144)||(20559450-20559576)
chr6 (140-247)||(20558043-20558150)
chr6 (15-106)||(10751053-10751145)
chr6 (15-97)||(26182117-26182199)
chr6 (294-356)||(24163325-24163387)
chr6 (51-91)||(31276852-31276892)
chr6 (15-93)||(31275957-31276036)
chr6 (15-91)||(11166076-11166153)
chr6 (229-277)||(26182339-26182387)
chr6 (314-368)||(26182410-26182463)
chr6 (248-276)||(23260272-23260300)
[»] chr7 (17 HSPs)
chr7 (15-368)||(22078059-22078410)
chr7 (15-276)||(10288215-10288477)
chr7 (15-276)||(15873400-15873661)
chr7 (15-368)||(11035807-11036169)
chr7 (15-368)||(18366750-18367105)
chr7 (15-368)||(21490912-21491271)
chr7 (15-259)||(9993859-9994104)
chr7 (15-330)||(48653252-48653582)
chr7 (15-156)||(40106447-40106594)
chr7 (15-108)||(12911155-12911249)
chr7 (15-197)||(3691932-3692121)
chr7 (15-96)||(24056681-24056763)
chr7 (15-97)||(49169763-49169846)
chr7 (18-91)||(9554570-9554644)
chr7 (15-97)||(13163697-13163780)
chr7 (15-108)||(12196178-12196273)
chr7 (213-270)||(49169964-49170020)
[»] chr5 (13 HSPs)
chr5 (15-276)||(537340-537602)
chr5 (194-368)||(4557610-4557781)
chr5 (15-171)||(42861995-42862156)
chr5 (15-164)||(38001608-38001761)
chr5 (15-91)||(23211155-23211231)
chr5 (229-330)||(25101568-25101665)
chr5 (229-330)||(25160661-25160758)
chr5 (198-260)||(42861880-42861942)
chr5 (15-108)||(40691563-40691658)
chr5 (213-272)||(6309214-6309272)
chr5 (15-108)||(30910447-30910541)
chr5 (194-276)||(40691395-40691476)
chr5 (40-96)||(4557454-4557510)
[»] chr1 (20 HSPs)
chr1 (15-276)||(43406791-43407053)
chr1 (15-276)||(338628-338890)
chr1 (15-276)||(37666603-37666864)
chr1 (15-272)||(6836422-6836677)
chr1 (15-368)||(35761454-35761827)
chr1 (15-330)||(18472366-18472673)
chr1 (15-197)||(33007075-33007262)
chr1 (15-272)||(19198224-19198474)
chr1 (15-95)||(24276088-24276168)
chr1 (15-91)||(24055691-24055767)
chr1 (15-97)||(8422256-8422339)
chr1 (15-108)||(9536769-9536864)
chr1 (282-368)||(19198452-19198537)
chr1 (201-246)||(36386378-36386423)
chr1 (17-96)||(16075403-16075483)
chr1 (308-356)||(26317615-26317662)
chr1 (213-247)||(24055824-24055858)
chr1 (213-247)||(24276028-24276062)
chr1 (15-84)||(33009104-33009174)
chr1 (293-361)||(9537140-9537206)
[»] chr4 (11 HSPs)
chr4 (15-276)||(40459471-40459733)
chr4 (40-368)||(49499485-49499813)
chr4 (15-366)||(2761518-2761880)
chr4 (15-93)||(41869372-41869451)
chr4 (213-276)||(55162712-55162774)
chr4 (15-97)||(55162891-55162974)
chr4 (15-100)||(10276745-10276831)
chr4 (194-276)||(28968844-28968925)
chr4 (213-272)||(69810-69868)
chr4 (15-108)||(69990-70082)
chr4 (15-108)||(28968662-28968757)
[»] chr2 (14 HSPs)
chr2 (15-276)||(40448001-40448263)
chr2 (15-366)||(12773857-12774212)
chr2 (55-247)||(41339720-41339908)
chr2 (15-283)||(35670191-35670483)
chr2 (15-276)||(40728854-40729113)
chr2 (15-164)||(28266575-28266729)
chr2 (194-270)||(36731835-36731911)
chr2 (15-100)||(23827813-23827899)
chr2 (15-100)||(34397279-34397365)
chr2 (15-108)||(18292167-18292262)
chr2 (194-272)||(44789030-44789107)
chr2 (15-108)||(44789194-44789289)
chr2 (15-96)||(29271283-29271365)
chr2 (316-368)||(28266883-28266934)
[»] chr3 (16 HSPs)
chr3 (15-276)||(7336116-7336380)
chr3 (15-276)||(46404024-46404287)
chr3 (15-276)||(16975840-16976100)
chr3 (15-260)||(5004153-5004401)
chr3 (15-272)||(9104627-9104880)
chr3 (15-368)||(11937312-11937653)
chr3 (15-96)||(8731443-8731525)
chr3 (15-96)||(9083330-9083412)
chr3 (285-366)||(9104566-9104646)
chr3 (213-326)||(17542329-17542437)
chr3 (15-91)||(5704621-5704698)
chr3 (15-96)||(43277466-43277548)
chr3 (15-108)||(17542128-17542223)
chr3 (21-91)||(16972610-16972681)
chr3 (309-345)||(8731212-8731247)
chr3 (309-345)||(9083099-9083134)
[»] scaffold0413 (1 HSPs)
scaffold0413 (15-225)||(1-214)
[»] chr8 (14 HSPs)
chr8 (54-368)||(40840984-40841300)
chr8 (15-160)||(35840786-35840932)
chr8 (15-108)||(41957883-41957975)
chr8 (194-330)||(22815930-22816061)
chr8 (15-91)||(12659362-12659439)
chr8 (249-330)||(44436543-44436620)
chr8 (15-96)||(6150220-6150302)
chr8 (194-300)||(44436601-44436703)
chr8 (213-298)||(22635627-22635708)
chr8 (250-330)||(22635692-22635768)
chr8 (213-270)||(3189092-3189148)
chr8 (15-108)||(44436790-44436884)
chr8 (15-91)||(10250945-10251022)
chr8 (282-330)||(3189128-3189175)
[»] scaffold0041 (2 HSPs)
scaffold0041 (15-273)||(32769-33016)
scaffold0041 (43-74)||(22493-22524)
[»] scaffold0657 (1 HSPs)
scaffold0657 (15-110)||(1762-1858)
[»] scaffold0013 (1 HSPs)
scaffold0013 (15-330)||(242470-242780)
[»] scaffold0002 (1 HSPs)
scaffold0002 (15-100)||(356386-356472)
[»] scaffold0120 (1 HSPs)
scaffold0120 (15-91)||(2146-2223)
[»] scaffold1838 (1 HSPs)
scaffold1838 (40-164)||(816-944)
[»] scaffold0069 (1 HSPs)
scaffold0069 (15-91)||(11403-11480)


Alignment Details
Target: chr6 (Bit Score: 269; Significance: 1e-150; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 269; E-Value: 1e-150
Query Start/End: Original strand, 15 - 368
Target Start/End: Original strand, 32449690 - 32450040
Alignment:
Q  15 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaa-tacatttaagtctttaa 113  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  32449690 aattggttcatactcaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaaatacatttaagtctttaa 32449789  T
Q  114 ggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttatcaacacaccgatgtataacagacccaatgcaatgcaatgatgtgcaaaa 213  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||| |||| ||||||||||||||| ||||    
T  32449790 ggtaaagttcatacacatttcttttgtatatataacagtttaatcacttatcaacacacaaatgtataacagactcaatccaatgcaatgatgtgtaaaa 32449889  T
Q  214 tgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaataactcgccgccacacatgcaccacaaaaatgcatatgc 313  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||   |||||||||| |||||||| | ||||||||||    
T  32449890 tgcatgctcttagatactacatgatccggatatatcccgccacacaggcaccacacagaaataac---ccgccacacaggcaccacacagatgcatatgc 32449986  T
Q  314 taatgcatgatcatgaacaatgaagactaaatccagccacttaggcacaacaatg 368  Q
    ||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||    
T  32449987 taatgcatgatcatgaa-aatgaagattaaatcccgccacttaggcacaacaatg 32450040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 15 - 276
Target Start/End: Complemental strand, 34636969 - 34636707
Alignment:
Q  15 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaa-tacatttaagtctttaa 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  34636969 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaaatacatttaagtctttaa 34636870  T
Q  114 ggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttatcaacacaccgatgtataacagacccaatgcaatgcaatgatgtgcaaaa 213  Q
    | ||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||||    
T  34636869 gataaagttcatacacatttcttttgtatatataacagtttaatcacttatcaacacacaaatgtataacagacccaatgcaatgcaatgatgtgcaaaa 34636770  T
Q  214 tgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaata 276  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  34636769 tgcatgctcttaaatactacatgatccggatatatcccgccacataggcaccacacagaaata 34636707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 15 - 208
Target Start/End: Original strand, 23260075 - 23260267
Alignment:
Q  15 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataag-aaaatacatttaagtctttaa 113  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||| |||||    
T  23260075 aattggttcatactcaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaataaaaaagaaataagaaaaatacatttaagtatttaa 23260174  T
Q  114 ggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttatcaacacaccgatgtataacagacccaatgcaatgcaatgatgtg 208  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||  |||||| |||||||| ||||||||| |||||||||    
T  23260175 ggtaaagttcatacacatttcttttgtatatataacagtttaatcacttatcaacaca--gatgtaaaacagacctaatgcaatgtaatgatgtg 23260267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 15 - 247
Target Start/End: Complemental strand, 24164573 - 24164335
Alignment:
Q  15 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaa-tacatttaagtc----- 108  Q
    ||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||||||||||| || ||||||||||| |||||| |||||         
T  24164573 aattggttcatactcaaagcacaagaacaatgtcataaaatagatagtatcaaaacttctcaatcaagaaaaaataagaaaaatacattaaagtcatatg 24164474  T
Q  109 -tttaaggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttatcaacacaccgatgtataacagacccaatgcaatgcaatgatgt 207  Q
     || ||||||||||| |||||||||||||||| || ||||| |||||||||| |||||||||||   |||||||||||||| ||||||||||||| ||||    
T  24164473 cttcaaggtaaagtttacacacatttcttttgcat-tataatagtttaatcaattatcaacacataaatgtataacagaccaaatgcaatgcaattatgt 24164375  T
Q  208 gcaaaatgcatgctcttaaatactacatgatccggatata 247  Q
    | ||||| ||||||||||||||||||||||||| ||||||    
T  24164374 gtaaaatacatgctcttaaatactacatgatccagatata 24164335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 101; E-Value: 6e-50
Query Start/End: Original strand, 15 - 330
Target Start/End: Original strand, 13772833 - 13773168
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaatacatttaagtc----- 108  Q
    ||||||||||||| ||||||||||||| ||||| || || ||||||| |||||||||||||||||||||||||  |||||||||||||  |||||         
T  13772833 aattggttcatactcaaagcacaagaaacaatgtcataatatagataatatcaaaacttctcaatcaaaaagatttaagaaaatacatacaagtcatatg 13772932  T
Q  109 -tttaaggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttatcaacacaccgatgtataa------------------cagaccc 189  Q
     ||| | |||||||||| |||||||||||||| || ||||| ||||||||||||||||||||||| |||| ||||                  |||| ||    
T  13772933 tttttaagtaaagttcatacacatttcttttgcat-tataatagtttaatcacttatcaacacacagatgaataaagacacacatatgtatagcagatcc 13773031  T
Q  190 aatgcaatgcaatgatgtgcaaaatgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaataactcgccgccaca 289  Q
    |||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||  || ||||||| ||||||||||||| |||    ||||||||    
T  13773032 aatgtaatgcaattatgtgtaaaatgcatgctcttaaatactacatgatccggatataatccaccacacaagcaccacacagaagtaa---tccgccaca 13773128  T
Q  290 catgcaccacaaaaatgcatatgctaatgcatgatcatgaa 330  Q
    || |||||||| | ||| ||||||| |||||||||||||||    
T  13773129 caggcaccacacagatgtatatgct-atgcatgatcatgaa 13773168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 194 - 276
Target Start/End: Original strand, 10751164 - 10751246
Alignment:
Q  194 caatgcaatgatgtgcaaaatgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaata 276  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10751164 caatgcaatgatgtgcaaaatgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaata 10751246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 15 - 144
Target Start/End: Complemental strand, 20559576 - 20559450
Alignment:
Q  15 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaatacatttaagtctttaag 114  Q
    ||||||||||||| ||||||||||||||||||||| ||| |||||| || |||||||||||||||||||||||||||||||||  |||||||||||||||    
T  20559576 aattggttcatactcaaagcacaagaacaatgccataaa-tagatactaccaaaacttctcaatcaaaaagaaataagaaaat--atttaagtctttaag 20559480  T
Q  115 gtaaagttcacacacatttcttttgtatat 144  Q
    ||||||| || ||||||||||||| |||||    
T  20559479 gtaaagtgcatacacatttcttttatatat 20559450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 140 - 247
Target Start/End: Complemental strand, 20558150 - 20558043
Alignment:
Q  140 tatatataaaagtttaatcacttatcaacacaccgatgtataacagacccaatgcaatgcaatgatgtgcaaaatgcatgctcttaaatactacatgatc 239  Q
    ||||||||| |||||||||||||||||||||||  ||||| |||||||||||||||||||||||||||  ||||  ||||||||||||||||||||||||    
T  20558150 tatatataacagtttaatcacttatcaacacacatatgtacaacagacccaatgcaatgcaatgatgtataaaacacatgctcttaaatactacatgatc 20558051  T
Q  240 cggatata 247  Q
    ||||||||    
T  20558050 cggatata 20558043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 15 - 106
Target Start/End: Original strand, 10751053 - 10751145
Alignment:
Q  15 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataag-aaaatacatttaag 106  Q
    ||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||| ||||||||||||||    
T  10751053 aattggttcatactcaaagcacaagaacaatgccacataatagatagtatcaaaacttctcaataaaaaagaaataagaaaaatacatttaag 10751145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 26182117 - 26182199
Alignment:
Q  15 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaat 97  Q
    ||||||||||||| ||||||||  |||||||| ||  ||||||||| ||||||||||| |||||||||||||| |||||||||    
T  26182117 aattggttcatactcaaagcaccggaacaatgtcatgaaatagataatatcaaaacttatcaatcaaaaagaattaagaaaat 26182199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 294 - 356
Target Start/End: Complemental strand, 24163387 - 24163325
Alignment:
Q  294 caccacaaaaatgcatatgctaatgcatgatcatgaacaatgaagactaaatccagccactta 356  Q
    ||||||| | || ||||||||||||||| |||||||| |||||||||||||||| ||||||||    
T  24163387 caccacacagatacatatgctaatgcataatcatgaaaaatgaagactaaatcccgccactta 24163325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 51 - 91
Target Start/End: Complemental strand, 31276892 - 31276852
Alignment:
Q  51 aaaatagatagtatcaaaacttctcaatcaaaaagaaataa 91  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  31276892 aaaatagatagtatcaaaacttctcaataaaaaagaaataa 31276852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 93
Target Start/End: Original strand, 31275957 - 31276036
Alignment:
Q  15 aattggttcatacccaaagcacaagaac-aatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataaga 93  Q
    |||||||||||||  ||| ||| ||||  |||| || |||||||||| |||||||||||||| |||||||||||||||||    
T  31275957 aattggttcatacttaaaacacgagaaataatgtcataaaatagataatatcaaaacttctcgatcaaaaagaaataaga 31276036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 11166076 - 11166153
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataa 91  Q
    |||||||||||||  ||||||||| || ||||||   |||||||||||||| ||| |||||| |||||||||||||||    
T  11166076 aattggttcatactgaaagcacaataaacaatgctctaaaatagatagtataaaatcttctcgatcaaaaagaaataa 11166153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 229 - 277
Target Start/End: Original strand, 26182339 - 26182387
Alignment:
Q  229 actacatgatccggatatatcccgccacacaggcaccacacagaaataa 277  Q
    |||| |||||||||||||| ||| ||||| |||||||||||||||||||    
T  26182339 actatatgatccggatataacccaccacataggcaccacacagaaataa 26182387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 314 - 368
Target Start/End: Original strand, 26182410 - 26182463
Alignment:
Q  314 taatgcatgatcatgaacaatgaagactaaatccagccacttaggcacaacaatg 368  Q
    ||||||||||||||||| |||||||||||||||| |||||   ||||||||||||    
T  26182410 taatgcatgatcatgaa-aatgaagactaaatcctgccacagtggcacaacaatg 26182463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 248 - 276
Target Start/End: Original strand, 23260272 - 23260300
Alignment:
Q  248 tcccgccacacaggcaccacacagaaata 276  Q
    |||||||||||||||||||||||||||||    
T  23260272 tcccgccacacaggcaccacacagaaata 23260300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 250; Significance: 1e-139; HSPs: 17)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 250; E-Value: 1e-139
Query Start/End: Original strand, 15 - 368
Target Start/End: Complemental strand, 22078410 - 22078059
Alignment:
Q  15 aattggttcatacc-caaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaa-tacatttaagtcttta 112  Q
    |||||||||||| | ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||    
T  22078410 aattggttcataactcaaagtacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcagaaagaaataagaaaaatacatttaagtcttta 22078311  T
Q  113 aggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttatcaacacaccgatgtataacagacccaatgcaatgcaatgatgtgcaaa 212  Q
    |||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||  ||||||||||||||| ||||||||||||||||||| |||    
T  22078310 aggtaaagttcatacacatttcttttgtatatataaatgtttaatcacttatcaacacatagatgtataacagacctaatgcaatgcaatgatgtgtaaa 22078211  T
Q  213 atgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaataactcgccgccacacatgcaccacaaaaatgcatatg 312  Q
    || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||    ||||||||| |||||||| | |||||||||    
T  22078210 atacatgctcttaaatactatatgatccggatatatcccgccacacaggcaccacacataaataac---acgccacacaggcaccacacagatgcatatg 22078114  T
Q  313 ctaatgcatgatcatgaacaatgaagactaaatccagccacttaggcacaacaatg 368  Q
    |||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  22078113 ctaatgcatgatcatgaa-aatgaagactaaatcccgccacttaggcacaacaatg 22078059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 15 - 276
Target Start/End: Original strand, 10288215 - 10288477
Alignment:
Q  15 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaa-tacatttaagtctttaa 113  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  10288215 aattggttcatactcaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaaatacatttaagtctttaa 10288314  T
Q  114 ggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttatcaacacaccgatgtataacagacccaatgcaatgcaatgatgtgcaaaa 213  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||    
T  10288315 ggtaaagttcatacacatttcttttgtatatataacagtttaatcacttatcaacacacagatgaataacagacccaatgcaatgcaatgatgtgtaaaa 10288414  T
Q  214 tgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaata 276  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  10288415 tgcatgctcttagatactacatgatccggatatatcccgccacacaggcaccacacagaaata 10288477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 15 - 276
Target Start/End: Original strand, 15873400 - 15873661
Alignment:
Q  15 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaa-tacatttaagtctttaa 113  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  15873400 aattggttcatactcaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaaatacatttaagtctt-aa 15873498  T
Q  114 ggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttatcaacacaccgatgtataacagacccaatgcaatgcaatgatgtgcaaaa 213  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||||| |||||||    
T  15873499 ggtaaagttcatacacatttcttttgtatatataacagtttaatcacttatcaacacacaaatgtataacagacccaatgcaatgcaatgatatgcaaaa 15873598  T
Q  214 tgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaata 276  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  15873599 tgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacggaaata 15873661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 183; E-Value: 7e-99
Query Start/End: Original strand, 15 - 368
Target Start/End: Original strand, 11035807 - 11036169
Alignment:
Q  15 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaa-tacatttaagtctttaa 113  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |    
T  11035807 aattggttcatactcaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaaatacatttaagtctttga 11035906  T
Q  114 ggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttatcaacacaccgatgtataacagacccaatgcaatgcaatgatgtgcaaaa 213  Q
    ||||||||||| ||||||||||||||||||||||| ||| ||||||||||||||||||| |||||||||||||||||||||||||||||| |||| ||||    
T  11035907 ggtaaagttcatacacatttcttttgtatatataacagtataatcacttatcaacacacagatgtataacagacccaatgcaatgcaatgttgtgtaaaa 11036006  T
Q  214 tgcatgctcttaaatactacatgatccggat---atatcccgccacacaggca-ccacacagaa-ata-----actcgccgccacacatgcaccacaaaa 303  Q
    |||||||||||| |||||||| ||     ||   |  |||||||||  ||||| |||||||||| |||     | |  |||||||  | |||||||| |     
T  11036007 tgcatgctcttagatactaca-gagtataattgcaattcccgccactaaggcatccacacagaatataattgcaattcccgccactaaggcaccacagag 11036105  T
Q  304 atgcatatgctaatgcatgatcatgaacaatgaagactaaatccagccacttaggcacaacaatg 368  Q
    ||||||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||    
T  11036106 atgcatatgctaatgcatgatcatgaa-aatgaagactaaatcccgccacttaggcacaacaatg 11036169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 181; E-Value: 1e-97
Query Start/End: Original strand, 15 - 368
Target Start/End: Original strand, 18366750 - 18367105
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataag-aaaatacatttaagt----- 107  Q
    ||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||||         
T  18366750 aattggttcatacccaaagcacaagaaacaatgtcataaaatagatagtatcaaaacttctcaattaaaaagaaataaggaaaatacattcaagttatat 18366849  T
Q  108 -ctttaaggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttatcaacacaccgatgtataacagacccaatgcaatgcaatgatg 206  Q
     ||||||  |||  |||||||| ||||||||||  | ||||| |||||||||||||||| ||||||  |||||||||||||||||||||||||||| |||    
T  18366850 gctttaaa-taagcttcacaca-atttcttttgctt-tataatagtttaatcacttatccacacacaaatgtataacagacccaatgcaatgcaattatg 18366946  T
Q  207 tgcaaaatgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaataactcgccgccacacatgcaccacaaaaatg 306  Q
    || |||||||||||||||| || |||||||||||||||||| ||||||||||| ||||||||||||||||||   || |||| ||||||||||| ||||     
T  18366947 tgtaaaatgcatgctcttagattctacatgatccggatataacccgccacacatgcaccacacagaaataac---ccaccacccatgcaccacacaaata 18367043  T
Q  307 catatgctaatgcatgatcatgaacaatgaagactaaatccagccacttaggcacaacaatg 368  Q
    ||||||||||||| ||||||||||||||||||| |||||||||||||||||| |||||||||    
T  18367044 catatgctaatgcgtgatcatgaacaatgaagattaaatccagccacttagggacaacaatg 18367105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 15 - 368
Target Start/End: Original strand, 21490912 - 21491271
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtat----caaaacttctcaatcaaaaagaaataag-aaaatacatttaagt- 107  Q
    ||||||||||||| ||||||||||||| ||||| || ||||||||||||||    |||||||||||||| ||||||||||||| |||||||||| ||||     
T  21490912 aattggttcatactcaaagcacaagaaacaatgtcataaaatagatagtatatatcaaaacttctcaattaaaaagaaataaggaaaatacattcaagtt 21491011  T
Q  108 -----ctttaaggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttatcaacacaccgatgtataacagacccaatgcaatgcaat 202  Q
         ||||||  ||| ||||||||| ||||||||||  | ||||| |||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  21491012 atatgctttaaa-taaggttcacaca-atttcttttgctt-tataatagtttaatcacttatcaacacacaaatgtataacagacccaatgcaatgcaat 21491108  T
Q  203 gatgtgcaaaatgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaataactcgccgccacacatgcaccacaaa 302  Q
     ||||| ||| |||||||| ||| || |||||||||||||| ||| ||||||||||||||||||||||||||||||    ||||||||| |||||||| |    
T  21491109 tatgtgtaaattgcatgcttttagattctacatgatccggaaataacccgccacacaggcaccacacagaaataac---acgccacacaggcaccacaca 21491205  T
Q  303 aatgcatatgctaatgcatgatcatgaacaatgaagactaaatccagccacttaggcacaacaatg 368  Q
     |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21491206 gatgcatatgctaatgcatgatcatgaacaatgaagactaaatccagccacttaggcacaacaatg 21491271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 15 - 259
Target Start/End: Complemental strand, 9994104 - 9993859
Alignment:
Q  15 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaa-tacatttaagtctttaa 113  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||  ||| ||||||| ||||  |||||||||||    
T  9994104 aattggttcatactcaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaataaaaagaaaaaaagaaaaatacacataagtctttaa 9994005  T
Q  114 ggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttatcaacacaccgatgtataacagacccaatgcaatgcaatgatgtgcaaaa 213  Q
    ||||||||||| ||||||||||||||| ||||||  | ||||||||||||||||||||   |||||||||||||||||||||||||||||  ||| ||||    
T  9994004 ggtaaagttcatacacatttcttttgtttatataccaatttaatcacttatcaacacaaaaatgtataacagacccaatgcaatgcaatgccgtgtaaaa 9993905  T
Q  214 tgcatgctcttaaatactacatgatccggatatatcccgccacaca 259  Q
    |||||||| ||||||||||||||||||||||| | |||||||||||    
T  9993904 tgcatgcttttaaatactacatgatccggataaaacccgccacaca 9993859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 15 - 330
Target Start/End: Original strand, 48653252 - 48653582
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaatacatttaagtc----- 108  Q
    ||||||||||||| ||||||||||||| |||||      |||||||| |||||||||||||||||||||||||  |||||||||||||| |||||         
T  48653252 aattggttcatactcaaagcacaagaaacaatg------aatagataatatcaaaacttctcaatcaaaaagatttaagaaaatacattcaagtcatatg 48653345  T
Q  109 -tttaaggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttatcaacacaccgatgtataa--------------------cagac 187  Q
     ||| | |||||||||| |||||||||||||| || ||||| ||||||| ||||||||||||||| |||| ||||                    |||||    
T  48653346 tttttaagtaaagttcatacacatttcttttgcat-tataatagtttaa-cacttatcaacacacagatgaataaagacacacatatgtatatagcagac 48653443  T
Q  188 ccaatgcaatgcaatgatgtgcaaaatgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaataactcgccgcca 287  Q
    ||||||||||||||| ||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||   ||||||    
T  48653444 ccaatgcaatgcaattatgtgtaaaatgcaagctcttaaatactacatgatccggatataacccgccacacaggcaccgcacagaaataac---ccgcca 48653540  T
Q  288 cacatgcaccacaaaaatgcatatgctaatgcatgatcatgaa 330  Q
    ||||  ||||||| | ||||||||| | |||||||||||||||    
T  48653541 cacagacaccacacagatgcatatg-ttatgcatgatcatgaa 48653582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 15 - 156
Target Start/End: Complemental strand, 40106594 - 40106447
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataag-aaaatacatttaa------g 106  Q
    ||||||||||||| ||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||| ||||| |||||||||| ||      |    
T  40106594 aattggttcatactcaaagcacaagaaacaatgtcataaaatagatagtatcaaaacttctcaatcaaaaagatataagaaaaatacattcaagtcattg 40106495  T
Q  107 tctttaaggtaaagttcacacacatttcttttgtatatataaaagtttaa 156  Q
    ||||||| |||||||||||||||||||| |||| || ||||| |||||||    
T  40106494 tctttaa-gtaaagttcacacacatttcatttgcat-tataatagtttaa 40106447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 15 - 108
Target Start/End: Original strand, 12911155 - 12911249
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaatacatttaagtc 108  Q
    ||||||||||||| ||||||||||||| ||||| || |||||||||||||||||||||||||||||||||||   |||||||||||||| |||||    
T  12911155 aattggttcatactcaaagcacaagaaacaatgtcataaaatagatagtatcaaaacttctcaatcaaaaaggtttaagaaaatacattcaagtc 12911249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 15 - 197
Target Start/End: Complemental strand, 3692121 - 3691932
Alignment:
Q  15 aattggttcatacccaaagcacaagaacaa--tgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataag-aaaatacatttaagtc--- 108  Q
    ||||||||||||| ||||||||||||| ||  | | | ||||||||| |||||||||||||||||||||||||||||||| |||||||||| |||||       
T  3692121 aattggttcatactcaaagcacaagaaaaaattccaaaaaaatagatggtatcaaaacttctcaatcaaaaagaaataagaaaaatacattcaagtcata 3692022  T
Q  109 --tttaaggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttatcaacacaccgatgtataacagacccaatgcaat 197  Q
      ||| | | |||||||| ||||||||| |||| | |||||| |||||||||| |||| ||  ||| |||  |||||| || |||||||||    
T  3692021 cgttttaagaaaagttcagacacatttcctttgca-atataatagtttaatcaattatgaaatcacagataaataacaaactcaatgcaat 3691932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 24056681 - 24056763
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaa 96  Q
    ||||| ||||||| |||||||| |||| ||||| || |||||||||| |||||||||||||||||||||||||||||||||||    
T  24056681 aattgattcatactcaaagcactagaaacaatgtcataaaatagataatatcaaaacttctcaatcaaaaagaaataagaaaa 24056763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 49169763 - 49169846
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaat 97  Q
    ||||||||||||| |||||||| |||| ||||| || |||||||||| ||||||||||| |||||||||||||| |||||||||    
T  49169763 aattggttcatactcaaagcaccagaaacaatgtcataaaatagataatatcaaaacttatcaatcaaaaagaattaagaaaat 49169846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 18 - 91
Target Start/End: Original strand, 9554570 - 9554644
Alignment:
Q  18 tggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataa 91  Q
    |||||||||| ||||||||||||| |||||  | ||| |||||||||||||||||||| ||||||||||||||||    
T  9554570 tggttcatactcaaagcacaagaaacaatgttataaagtagatagtatcaaaacttcttaatcaaaaagaaataa 9554644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 97
Target Start/End: Original strand, 13163697 - 13163780
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaat 97  Q
    ||||||||||||| |||||||| |||| ||||| || ||| |||||| ||||||||||| ||||| |||||||| |||||||||    
T  13163697 aattggttcatactcaaagcaccagaaacaatgtcataaattagataatatcaaaacttatcaataaaaaagaattaagaaaat 13163780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 108
Target Start/End: Original strand, 12196178 - 12196273
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataag-aaaatacatttaagtc 108  Q
    ||||||||||||| |||||||| | || ||||| ||  ||||||||| || |||||||| |||||||||||||| |||| |||||||||| |||||    
T  12196178 aattggttcatactcaaagcaccataaacaatgtcatgaaatagataatagcaaaacttatcaatcaaaaagaattaagaaaaatacattcaagtc 12196273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 49169964 - 49170020
Alignment:
Q  213 atgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacaca 270  Q
    ||||||||||||| | |||| |||||||||||||| ||||||||||| ||||||||||    
T  49169964 atgcatgctcttata-actatatgatccggatataacccgccacacaagcaccacaca 49170020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 227; Significance: 1e-125; HSPs: 13)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 15 - 276
Target Start/End: Complemental strand, 537602 - 537340
Alignment:
Q  15 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaa-tacatttaagtctttaa 113  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  537602 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaaatacatttaagtctttaa 537503  T
Q  114 ggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttatcaacacaccgatgtataacagacccaatgcaatgcaatgatgtgcaaaa 213  Q
    | ||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||   |||||||||||||||||||||||||||||||||||||||    
T  537502 gataaagttcatacacatttcttttgtatatataacagtttaatcacttatcaacacagaaatgtataacagacccaatgcaatgcaatgatgtgcaaaa 537403  T
Q  214 tgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaata 276  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  537402 tgcatgctcttatatactacatgatccggatatatcccgccacacaggcaccacacagaaata 537340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 194 - 368
Target Start/End: Original strand, 4557610 - 4557781
Alignment:
Q  194 caatgcaatgatgtgcaaaatgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaataactcgccgccacacatg 293  Q
    ||||||||| ||| | || ||||||||||||| || ||||||| ||| |||||| ||||||||||||||||||||||||||||||   |||||||||| |    
T  4557610 caatgcaattatgcgtaagatgcatgctcttagattctacatggtccagatataacccgccacacaggcaccacacagaaataac---ccgccacacagg 4557706  T
Q  294 caccacaaaaatgcatatgctaatgcatgatcatgaacaatgaagactaaatccagccacttaggcacaacaatg 368  Q
    ||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4557707 caccacagagatgcatatgctaatgcatgatcatgaacaatgaagactaaatccagccacttaggcacaacaatg 4557781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 15 - 171
Target Start/End: Complemental strand, 42862156 - 42861995
Alignment:
Q  15 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaatacatttaagtc------ 108  Q
    |||| ||| |||| |||||||| | ||||||| || ||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||          
T  42862156 aattagtttatactcaaagcaccaaaacaatgtcataaaatagatagtatcaaaacttctcaatcaaaaagatttaagaaaatacatttaagtcatatgt 42862057  T
Q  109 tttaaggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttatcaacaca 171  Q
    ||| | |||||||||| |||||||||||||| || ||||| ||||||||||||||||||||||    
T  42862056 ttttaagtaaagttcatacacatttcttttgcat-tataatagtttaatcacttatcaacaca 42861995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 15 - 164
Target Start/End: Complemental strand, 38001761 - 38001608
Alignment:
Q  15 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaatacatttaagtc-----t 109  Q
    ||||||||||||| |||| ||| | ||||||| || ||||||||||||||||||||||||||||||||||||  | | |||||||||| |||||          
T  38001761 aattggttcatacacaaaacaccaaaacaatgtcataaaatagatagtatcaaaacttctcaatcaaaaagattttaaaaaatacattcaagtcatattc 38001662  T
Q  110 ttaaggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttat 164  Q
    |||| |||||||||||||| ||||| |||| || ||||  |||||||||| ||||    
T  38001661 ttaaagtaaagttcacacatatttcatttgcat-tatactagtttaatcaattat 38001608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 23211231 - 23211155
Alignment:
Q  15 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataa 91  Q
    ||||||||||||| |||||||||| |||||||||||||| ||||||||||||||| ||||| || ||||| ||||||    
T  23211231 aattggttcatactcaaagcacaataacaatgccacaaagtagatagtatcaaaatttctcgataaaaaataaataa 23211155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 229 - 330
Target Start/End: Original strand, 25101568 - 25101665
Alignment:
Q  229 actacatgatccggatatatcccgccacacaggcaccacacagaaataactcgccgccacacatgcaccacaaaaatgcatatgctaatgcatgatcatg 328  Q
    |||| |||||||||||||| |||| |||||||||||||||||||||||||   |||||||||| |||||||| | |||||||| |  |||||||||||||    
T  25101568 actatatgatccggatataacccgtcacacaggcaccacacagaaataac---ccgccacacaggcaccacacagatgcatatac-catgcatgatcatg 25101663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 229 - 330
Target Start/End: Original strand, 25160661 - 25160758
Alignment:
Q  229 actacatgatccggatatatcccgccacacaggcaccacacagaaataactcgccgccacacatgcaccacaaaaatgcatatgctaatgcatgatcatg 328  Q
    |||| |||||||||||||| |||| |||||||||||||||||||||||||   |||||||||| |||||||| | |||||||| |  |||||||||||||    
T  25160661 actatatgatccggatataacccgtcacacaggcaccacacagaaataac---ccgccacacaggcaccacacagatgcatatac-catgcatgatcatg 25160756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 198 - 260
Target Start/End: Complemental strand, 42861942 - 42861880
Alignment:
Q  198 gcaatgatgtgcaaaatgcatgctcttaaatactacatgatccggatatatcccgccacacag 260  Q
    ||||| ||||| |||||||||||||||||||||||||||||| ||||||| ||||||||||||    
T  42861942 gcaattatgtgtaaaatgcatgctcttaaatactacatgatctggatataacccgccacacag 42861880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 108
Target Start/End: Complemental strand, 40691658 - 40691563
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataag-aaaatacatttaagtc 108  Q
    ||||||||||||| |||||||| |||| ||||  || |||||||||| ||| ||||||| |||||||||||||| |||| |||||||||| |||||    
T  40691658 aattggttcatactcaaagcaccagaaacaatatcataaaatagataatattaaaacttatcaatcaaaaagaattaagaaaaatacattcaagtc 40691563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 213 - 272
Target Start/End: Complemental strand, 6309272 - 6309214
Alignment:
Q  213 atgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacaga 272  Q
    ||||||||||||| | |||| |||||||||||||| |||||||||||| |||||||||||    
T  6309272 atgcatgctcttata-actatatgatccggatataacccgccacacagacaccacacaga 6309214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 108
Target Start/End: Complemental strand, 30910541 - 30910447
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaatacatttaagtc 108  Q
    ||||||||||||| |||| ||| | || ||||| || ||| |||||| |||||||||||||||||||||||||  || |||| |||||| |||||    
T  30910541 aattggttcatactcaaaacaccataaacaatgtcataaagtagataatatcaaaacttctcaatcaaaaagatttatgaaattacattcaagtc 30910447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 194 - 276
Target Start/End: Complemental strand, 40691476 - 40691395
Alignment:
Q  194 caatgcaatgatgtgcaaaatgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaata 276  Q
    ||||||||| ||| | || ||||||||||||| | |||| |||||||||||||| |  | |||||||||||||||||||||||    
T  40691476 caatgcaattatgcgtaagatgcatgctcttata-actatatgatccggatataacatgtcacacaggcaccacacagaaata 40691395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 40 - 96
Target Start/End: Original strand, 4557454 - 4557510
Alignment:
Q  40 aacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaa 96  Q
    ||||||| || |||||||||| |||||||||||  | ||||||||||| ||||||||    
T  4557454 aacaatgtcataaaatagataatatcaaaacttacctatcaaaaagaattaagaaaa 4557510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 227; Significance: 1e-125; HSPs: 20)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 15 - 276
Target Start/End: Original strand, 43406791 - 43407053
Alignment:
Q  15 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaa-tacatttaagtctttaa 113  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  43406791 aattggttcatactcaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaaatacatttaagtctttaa 43406890  T
Q  114 ggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttatcaacacaccgatgtataacagacccaatgcaatgcaatgatgtgcaaaa 213  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||    
T  43406891 ggtaaagttcatacacatttcttttgtatatataacagtttaatcacttatcaacacacagatgaataacagacccaatgcaatgcaatgatgtgtaaaa 43406990  T
Q  214 tgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaata 276  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  43406991 tgcatgctcttagatactacatgatccggatatatcccgccacacaggcaccacacagaaata 43407053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 15 - 276
Target Start/End: Complemental strand, 338890 - 338628
Alignment:
Q  15 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaa-tacatttaagtctttaa 113  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  338890 aattggttcatactcaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaacaagaaaaatacatttaagtctttaa 338791  T
Q  114 ggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttatcaacacaccgatgtataacagacccaatgcaatgcaatgatgtgcaaaa 213  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||    
T  338790 ggtaaagttcatacacatttcttttgtatatataacagtttaatcacttatcaacacacagatgaataacagacccaatgcaatgcaatgatgtgtaaaa 338691  T
Q  214 tgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaata 276  Q
    ||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  338690 tgcatgctcttaggtactacatgatccggatataacccgccacacaggcaccacacagaaata 338628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 15 - 276
Target Start/End: Original strand, 37666603 - 37666864
Alignment:
Q  15 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaa-tacatttaagtctttaa 113  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||||||||||||    
T  37666603 aattggttcatactcaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaa-gaattaagaaaaatacatttaagtctttaa 37666701  T
Q  114 ggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttatcaacacaccgatgtataacagacccaatgcaatgcaatgatgtgcaaaa 213  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||| |||||||||||| ||||    
T  37666702 ggtaaagttcatacacatttcttttgtatatataaaagtttaatcacttatcaacacacatatgtataacagacccaatgcagtgcaatgatgtgtaaaa 37666801  T
Q  214 tgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaata 276  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37666802 tgcatgctcttagatactacatgatccggatatatcccgccacacaggcaccacacagaaata 37666864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 15 - 272
Target Start/End: Complemental strand, 6836677 - 6836422
Alignment:
Q  15 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaa-tacatttaagtctttaa 113  Q
    |||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  6836677 aattggttcatacttaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaaatacatttaagtctttaa 6836578  T
Q  114 ggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttatcaacacaccgatgtataacagacccaatgcaatgcaatgatgtgcaaaa 213  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||   |||||||||||| |||||||||||||| |||||||||||||||||||| ||||    
T  6836577 ggtaaagttcatacacatttcttttgtatatataacagtttaat---ttatcaacacacagatgtataacagactcaatgcaatgcaatgatgtgtaaaa 6836481  T
Q  214 tgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacaga 272  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  6836480 tgcatgctcttaaatactacatgatccggatataacccgccacacaggcaccacacaga 6836422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 151; E-Value: 8e-80
Query Start/End: Original strand, 15 - 368
Target Start/End: Original strand, 35761454 - 35761827
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaatacatttaagtc----- 108  Q
    ||||||||||||| ||||||||||||| | |||||| |||||||||  ||||||||||||| |||||||||||  ||| |||||||||| |||||         
T  35761454 aattggttcatactcaaagcacaagaaaccatgccataaaatagatgatatcaaaacttctgaatcaaaaagatttaaaaaaatacattcaagtcatatg 35761553  T
Q  109 -tttaaggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttatcaacacaccgatgtataa------------------cagaccc 189  Q
     ||| | ||| |||||| |||||||||||||| || ||||| ||||||||||||||||||||||| |||| ||||                  |||||||    
T  35761554 cttttaagtagagttcatacacatttcttttgcat-tataatagtttaatcacttatcaacacacagatgaataaagacacacatatgtatagcagaccc 35761652  T
Q  190 aatgcaatgcaatgatgtgcaaaatgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaataactcgccgccaca 289  Q
    ||||||||||||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||    
T  35761653 aatgcaatgcaatgatgtgtaaaatgtatgctcttagatactacatgatccggatatatcccgccacacaggcaccacacagaaataac---ccgccaca 35761749  T
Q  290 catgcaccacaaaaatgcatatgctaatgcatgatcatgaacaatgaagactaaatccagccacttaggcacaacaatg 368  Q
    || |||||||| | ||||||||||||||||||||||||||| |||||||| ||||| | ||||||||||||||||||||    
T  35761750 caggcaccacacagatgcatatgctaatgcatgatcatgaa-aatgaagattaaattccgccacttaggcacaacaatg 35761827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 15 - 330
Target Start/End: Original strand, 18472366 - 18472673
Alignment:
Q  15 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaatacatttaagtc------ 108  Q
    ||||||||||||| |||||||| | ||||||| || ||||||||||||||||||||||||||||||||||||  | |||||||||||| |||||          
T  18472366 aattggttcatactcaaagcaccaaaacaatgtcataaaatagatagtatcaaaacttctcaatcaaaaagattttagaaaatacattcaagtcatatgt 18472465  T
Q  109 tttaaggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttatcaacacaccgatgtataacagacccaatgcaatgcaatgatgtg 208  Q
    ||| | |||||||||| ||||||||||||||  | ||||| ||||||||||||||||||||||  |||| ||||         ||||||||||| |||||    
T  18472466 ttttaagtaaagttcatacacatttcttttgctt-tataatagtttaatcacttatcaacacatagatgaataa---------tgcaatgcaattatgtg 18472555  T
Q  209 caaaatgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaataactcgccgccacacatgcaccacaaaaatgca 308  Q
     |||||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||   |||||| ||| |||||||| | |||||    
T  18472556 taaaatgtatgctcttaaatactacatgatccggatataacccgccacataggcaccacacagaaataac---ccgccatacaggcaccacacagatgca 18472652  T
Q  309 tatgctaatgcatgatcatgaa 330  Q
    |||||| |||||||||||||||    
T  18472653 tatgct-atgcatgatcatgaa 18472673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 15 - 197
Target Start/End: Original strand, 33007075 - 33007262
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaa-tacatttaagt----- 107  Q
    ||||| ||||||| |||||||| |||| ||||| || |||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||         
T  33007075 aattgattcatactcaaagcaccagaaacaatgtcataaaatagataatatcaaaacttctcaatcaaaaagaaataagaaaagtacatttaagtcatat 33007174  T
Q  108 -ctttaaggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttatcaacacaccgatgtataacagacccaatgcaat 197  Q
     |||||||  ||| |||||||||||||   |||||| ||||| |||||||||||||||||||||||  || || ||| ||| |||||||||    
T  33007175 cctttaag--aaaattcacacacattttccttgtat-tataatagtttaatcacttatcaacacacaaatatacaactgactcaatgcaat 33007262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 15 - 272
Target Start/End: Original strand, 19198224 - 19198474
Alignment:
Q  15 aattggttcatacccaaagcacaaga---acaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataag-aaaatacatttaagtctt 110  Q
    ||||||||||||| ||||||||||||   |||||| || |||||||||||||||||||||||||||| |||||||| |||| ||||||||||||||||      
T  19198224 aattggttcatactcaaagcacaagataaacaatgtcataaaatagatagtatcaaaacttctcaattaaaaagaattaagaaaaatacatttaagtc-- 19198321  T
Q  111 taaggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttatcaacacaccgatgtataacagacccaatgcaatgcaatgatgtgca 210  Q
      | ||||||||||||  |||||| |||| || |||||   |||||||| || | ||  |||  || || ||| |||      ||||||||| |||   |    
T  19198322 --atgtaaagttcacatgcatttcatttgcat-tataatgttttaatcaattctaaaatcacaaatatacaactgac-----tcaatgcaattatgcata 19198413  T
Q  211 aaatgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacaga 272  Q
    | ||||||||||||| | |||| |||||||||||||| ||||||||||||||||||||||||    
T  19198414 agatgcatgctcttata-actatatgatccggatataacccgccacacaggcaccacacaga 19198474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 15 - 95
Target Start/End: Complemental strand, 24276168 - 24276088
Alignment:
Q  15 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaa 95  Q
    ||||||||||||| ||||| ||||||||||||||||||| ||||||| ||||||||||||| ||||||| |||||||||||    
T  24276168 aattggttcatactcaaagtacaagaacaatgccacaaagtagatagcatcaaaacttctcgatcaaaaggaaataagaaa 24276088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 24055691 - 24055767
Alignment:
Q  15 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataa 91  Q
    |||||||| |||| ||||||||||||||||||||||||| ||||||  ||||||||||||| ||||||| |||||||    
T  24055691 aattggttgatactcaaagcacaagaacaatgccacaaagtagataacatcaaaacttctcgatcaaaaggaaataa 24055767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 8422339 - 8422256
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaat 97  Q
    ||||||||||||| |||||||| |||| ||||| || |||||||||| ||||||||||| |||||||||||||| |||||||||    
T  8422339 aattggttcatactcaaagcaccagaaacaatgtcataaaatagataatatcaaaacttatcaatcaaaaagaattaagaaaat 8422256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 108
Target Start/End: Original strand, 9536769 - 9536864
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataag-aaaatacatttaagtc 108  Q
    ||||||||||||| |||||||| |||| ||||| || |||||||||| ||||||||||| |||||||||||||| |||| |||||||||| |||||    
T  9536769 aattggttcatactcaaagcactagaaacaatgtcataaaatagataatatcaaaacttatcaatcaaaaagaattaagaaaaatacattcaagtc 9536864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 282 - 368
Target Start/End: Original strand, 19198452 - 19198537
Alignment:
Q  282 ccgccacacatgcaccacaaaaatgcatatgctaatgcatgatcatgaacaatgaagactaaatccagccacttaggcacaacaatg 368  Q
    |||||||||| |||||||| | ||||||||| |||||||||||||| || |||||||| ||||| | |||||||||| |||||||||    
T  19198452 ccgccacacaggcaccacacagatgcatatgttaatgcatgatcat-aaaaatgaagattaaattccgccacttaggtacaacaatg 19198537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 201 - 246
Target Start/End: Original strand, 36386378 - 36386423
Alignment:
Q  201 atgatgtgcaaaatgcatgctcttaaatactacatgatccggatat 246  Q
    ||||| || |||||||||||||||||||||||||||||| ||||||    
T  36386378 atgatctgtaaaatgcatgctcttaaatactacatgatctggatat 36386423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 96
Target Start/End: Complemental strand, 16075483 - 16075403
Alignment:
Q  17 ttggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaa 96  Q
    ||||||||||| ||||||| ||||| |||||  | |||||||||  ||||||||||||| ||| |||||||| ||||||||    
T  16075483 ttggttcatactcaaagcagaagaaacaatgttataaaatagatgatatcaaaacttcttaataaaaaagaattaagaaaa 16075403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 308 - 356
Target Start/End: Complemental strand, 26317662 - 26317615
Alignment:
Q  308 atatgctaatgcatgatcatgaacaatgaagactaaatccagccactta 356  Q
    ||||||||||||||||||||||| |||||||||||||| | ||||||||    
T  26317662 atatgctaatgcatgatcatgaa-aatgaagactaaattccgccactta 26317615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 247
Target Start/End: Original strand, 24055824 - 24055858
Alignment:
Q  213 atgcatgctcttaaatactacatgatccggatata 247  Q
    |||||||||||||| ||||||||||||||||||||    
T  24055824 atgcatgctcttaattactacatgatccggatata 24055858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 213 - 247
Target Start/End: Complemental strand, 24276062 - 24276028
Alignment:
Q  213 atgcatgctcttaaatactacatgatccggatata 247  Q
    |||||||||||||| ||||||||||||||||||||    
T  24276062 atgcatgctcttaattactacatgatccggatata 24276028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 84
Target Start/End: Complemental strand, 33009174 - 33009104
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaa 84  Q
    ||||||||||| | ||||||||||||| ||||| || ||| ||||||||||| ||||| ||| ||||||||    
T  33009174 aattggttcatgctcaaagcacaagaaacaatgtcataaagtagatagtatcgaaactactcgatcaaaaa 33009104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 293 - 361
Target Start/End: Original strand, 9537140 - 9537206
Alignment:
Q  293 gcaccacaaaaatgcatatgctaatgcatgatcatgaacaatgaagactaaatccagccacttaggcac 361  Q
    |||||||| ||||||||||||  ||||||||||||||| |||| |||||||| || |||||| ||||||    
T  9537140 gcaccacacaaatgcatatgc-catgcatgatcatgaa-aatgtagactaaaacccgccactaaggcac 9537206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 219; Significance: 1e-120; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 15 - 276
Target Start/End: Complemental strand, 40459733 - 40459471
Alignment:
Q  15 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaa-tacatttaagtctttaa 113  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  40459733 aattggttcatactcaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaaatacatttaagtctttaa 40459634  T
Q  114 ggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttatcaacacaccgatgtataacagacccaatgcaatgcaatgatgtgcaaaa 213  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||    
T  40459633 ggtaaagttcatacacatttcttttgtatatataacagtttaatcacttatcaacacacagatgaataacagacccaatgcaatgcaatgatgtgtaaaa 40459534  T
Q  214 tgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaata 276  Q
    |||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||    
T  40459533 tgcatgctcttagatactacatgatccggatataacccgccacacagacaccacacagaaata 40459471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 40 - 368
Target Start/End: Complemental strand, 49499813 - 49499485
Alignment:
Q  40 aacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaa-tacatttaagt------ctttaaggtaaagttcacacacatt 132  Q
    ||||||| || |||||||||  ||||||||||||||||| ||||||||||||||||| |||||| ||||      ||||||  ||| ||||||||| |||    
T  49499813 aacaatgtcataaaatagatcatatcaaaacttctcaattaaaaagaaataagaaaaatacattcaagttatatgctttaa--taaggttcacaca-att 49499717  T
Q  133 tcttttgtatatataaaagtttaatcacttatcaacacaccgatgtataacagacccaatgcaatgcaatgatgtgcaaaatgcatgctcttaaatacta 232  Q
    |||||||  | ||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||    
T  49499716 tcttttgctt-tataatagtttaatcacttatcaacacacaaatgtataacagacccaatgcaatgcaattatgtgtaaaatgcatgctcttaaattcta 49499618  T
Q  233 catgatccggatatatcccgccacacaggcaccacacagaaataactcgccgccacacatgcaccacaaaaatgcatatgctaatgcatgatcatgaaca 332  Q
    ||||||| ||||||| ||||||||||||||||||||||||||||||   |||||||||| |||||||| | |||||||||||||||||||||||||||||    
T  49499617 catgatctggatataacccgccacacaggcaccacacagaaataac---ccgccacacaggcaccacacagatgcatatgctaatgcatgatcatgaaca 49499521  T
Q  333 atgaagactaaatccagccacttaggcacaacaatg 368  Q
    ||||||||||||||||||||||||||||||| ||||    
T  49499520 atgaagactaaatccagccacttaggcacaaaaatg 49499485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 15 - 366
Target Start/End: Original strand, 2761518 - 2761880
Alignment:
Q  15 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaa-tacatttaagtc----- 108  Q
    ||||||||||||| |||||||||||||   ||||| ||||||||||||||| |||||||||||||||||||||||||||||| |||||| || ||         
T  2761518 aattggttcatactcaaagcacaagaa---tgccataaaatagatagtatctaaacttctcaatcaaaaagaaataagaaaaatacattcaaatcatatg 2761614  T
Q  109 -tttaaggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttatcaaca-------------caccgatgtataacagacccaatgc 194  Q
     ||| | |||||||||| |||||||||||||| ||  |||| ||||||||||||||||||||             |||||||||||||||||| ||||||    
T  2761615 cttttaagtaaagttcatacacatttcttttgcatc-ataatagtttaatcacttatcaacacatatgtataacacaccgatgtataacagacacaatgc 2761713  T
Q  195 aatgcaatgatgtgcaaaatgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaataactcgccgccacacatgc 294  Q
    |||||||| ||||| ||||||||||||||||||||||| ||||| |||||||| ||||||||  ||||||||||||| ||||||   || ||||  | ||    
T  2761714 aatgcaatcatgtgtaaaatgcatgctcttaaatactaaatgattcggatataacccgccactaaggcaccacacaggaataac---cctccactaaggc 2761810  T
Q  295 accacaaaaatgcatatgctaatgcatgatcatgaacaatgaagactaaatccagccacttaggcacaacaa 366  Q
    |||||| ||||||||||||  ||||||||||||||| ||||||  ||||||||  ||||||| |||| ||||    
T  2761811 accacacaaatgcatatgc-catgcatgatcatgaa-aatgaatcctaaatcccaccacttaagcaccacaa 2761880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 93
Target Start/End: Complemental strand, 41869451 - 41869372
Alignment:
Q  15 aattggttcatacccaaagcacaagaac-aatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataaga 93  Q
    |||| |||||||| |||||||||||||  |||| ||| ||||||||| ||||||||||||||||||||||||||||||||    
T  41869451 aattagttcatactcaaagcacaagaaataatgtcacgaaatagataatatcaaaacttctcaatcaaaaagaaataaga 41869372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 213 - 276
Target Start/End: Complemental strand, 55162774 - 55162712
Alignment:
Q  213 atgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaata 276  Q
    ||||||||||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||    
T  55162774 atgcatgctcttata-actacatgatccggatataacccgccacacaggcaccacacagaaata 55162712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 15 - 97
Target Start/End: Complemental strand, 55162974 - 55162891
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaat 97  Q
    ||||||||||||| |||||||| |||| ||||| || |||||||||| ||||||||||| |||||||||||||| |||||||||    
T  55162974 aattggttcatactcaaagcaccagaaacaatgtcataaaatagataatatcaaaacttatcaatcaaaaagaattaagaaaat 55162891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 100
Target Start/End: Complemental strand, 10276831 - 10276745
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaataca 100  Q
    ||||||||||||| ||||||||||||| ||||||   |||||||||||||| ||| |||||| ||||||||||||||| || |||||    
T  10276831 aattggttcatactcaaagcacaagaaacaatgctctaaaatagatagtataaaatcttctcgatcaaaaagaaataaaaatataca 10276745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 194 - 276
Target Start/End: Original strand, 28968844 - 28968925
Alignment:
Q  194 caatgcaatgatgtgcaaaatgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaata 276  Q
    ||||||||| |||  ||| ||||||||||||| | |||| |||||||||||||| ||||||||||| ||||||||||||||||    
T  28968844 caatgcaattatgcacaagatgcatgctcttata-actatatgatccggatataacccgccacacatgcaccacacagaaata 28968925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 213 - 272
Target Start/End: Complemental strand, 69868 - 69810
Alignment:
Q  213 atgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacaga 272  Q
    ||||||||||||| | |||| |||||||||||||| ||||||||||||||||||||||||    
T  69868 atgcatgctcttata-actatatgatccggatataacccgccacacaggcaccacacaga 69810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 108
Target Start/End: Complemental strand, 70082 - 69990
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaatacatttaagtc 108  Q
    ||||||||||||| ||| |||| |||| | ||| || |||||||||| |||||||||||||||||| ||||||  |||||||||||||| |||||    
T  70082 aattggttcatactcaa-gcaccagaaactatgtcataaaatagataatatcaaaacttctcaatc-aaaagatttaagaaaatacattcaagtc 69990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 108
Target Start/End: Original strand, 28968662 - 28968757
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataag-aaaatacatttaagtc 108  Q
    |||||||| |||| ||||||||||||| ||||  || |||||||||| |||||||||||  |||| |||| ||| |||| |||||||||| |||||    
T  28968662 aattggttgatactcaaagcacaagaaacaatctcataaaatagataatatcaaaacttaccaataaaaacgaattaagaaaaatacattcaagtc 28968757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 219; Significance: 1e-120; HSPs: 14)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 15 - 276
Target Start/End: Complemental strand, 40448263 - 40448001
Alignment:
Q  15 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaa-tacatttaagtctttaa 113  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  40448263 aattggttcatactcaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaaatacatttaagtctttaa 40448164  T
Q  114 ggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttatcaacacaccgatgtataacagacccaatgcaatgcaatgatgtgcaaaa 213  Q
    ||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| ||||    
T  40448163 ggtaaagttcatacacatttcttttgtatatataacagtttaatcacttatcaacacacagatgaataacagacccaatgcaatgcaatgatgtgtaaaa 40448064  T
Q  214 tgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaata 276  Q
    ||||||||||||  |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  40448063 tgcatgctcttaggtactacatgatccggatataacccgccacacaggcaccacacagaaata 40448001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 15 - 366
Target Start/End: Original strand, 12773857 - 12774212
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaa-tacatttaagtc---- 108  Q
    ||||||||||||| ||||||||||||| ||||| || || |||||||||| ||||||||||||||||||||||| |||||||| ||||||||||||        
T  12773857 aattggttcatactcaaagcacaagaaacaatgtcataagatagatagtaccaaaacttctcaatcaaaaagaattaagaaaaatacatttaagtcatat 12773956  T
Q  109 --tttaaggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttatcaacacaccgatgtataacagacccaatgcaatgcaatgatg 206  Q
      |||||||||||||||||||||||||| ||||||| ||||| |||||||||||||||||||||||  ||| ||||||||| ||||||||||| || |||    
T  12773957 tctttaaggtaaagttcacacacatttcctttgtat-tataatagtttaatcacttatcaacacacaaatgcataacagactcaatgcaatgcgattatg 12774055  T
Q  207 tgcaaaatgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaataactcgccgccacacatgcaccacaaaaatg 306  Q
    || ||||||||||||||||||||||||||||||| |||||| ||||||||||| |||||||||| ||||||| |||| | | | | |||||||| | |||    
T  12774056 tgtaaaatgcatgctcttaaatactacatgatccagatataacccgccacacatgcaccacacaaaaataacccgccactata-aggcaccacacagatg 12774154  T
Q  307 catatgctaatgcatgatcatgaacaatgaagactaaatccagccacttaggcacaacaa 366  Q
    |||||||  ||||||||||||||| ||||||   | ||||| ||||||||||||| ||||    
T  12774155 catatgc-gatgcatgatcatgaa-aatgaatcatgaatcccgccacttaggcaccacaa 12774212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 55 - 247
Target Start/End: Original strand, 41339720 - 41339908
Alignment:
Q  55 tagatagtatcaaaacttctcaatcaaaaagaaataagaaaa-tacatttaagtctttaaggtaaagttcacacacatttcttttgtatatataaaagtt 153  Q
    |||||| ||||||||||| ||||| |||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||    
T  41339720 tagataatatcaaaacttatcaataaaaaagaaataataaaaatacatttaagtctttaaggtaaagttcatacacatttcttttgtatatataaaaatt 41339819  T
Q  154 taatcacttatcaacacaccgatgtataacagacccaatgcaatgcaatgatgtgcaaaatgcatgctcttaaatactacatgatccggatata 247  Q
    ||||||||||||||||||| |||||||||||||||     ||||||||||||||| |||||||||||||||| |||||||||||||||||||||    
T  41339820 taatcacttatcaacacacagatgtataacagacc-----caatgcaatgatgtgtaaaatgcatgctcttagatactacatgatccggatata 41339908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 6e-47
Query Start/End: Original strand, 15 - 283
Target Start/End: Original strand, 35670191 - 35670483
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaatacatttaagtc----- 108  Q
    ||||||||| ||| ||||||||||||| ||||| || ||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||         
T  35670191 aattggttcctactcaaagcacaagaaacaatgtcataaaatagatagtatcaaaacttctcaatcaaaaagatttaagaaaatacattcaagtcatatg 35670290  T
Q  109 -tttaaggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttatcaacacaccgatgtataa------------------cagaccc 189  Q
     ||| | |||||||||| ||||||||||||||  | ||||| |||||||||| |||||||||||| |||| ||||                  |||||||    
T  35670291 tttttaagtaaagttcatacacatttcttttgcgt-tataatagtttaatcagttatcaacacacagatgaataaggacacacatatatatagcagaccc 35670389  T
Q  190 aatgcaatgcaatgatgtgcaaaatgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaataactcgcc 283  Q
    ||||||||||||| ||||| |||||||||||||||||||||||||||||||  ||||| | ||||||||||||| |||||| ||||||| ||||    
T  35670390 aatgcaatgcaattatgtgtaaaatgcatgctcttaaatactacatgatccaaatataactcgccacacaggcatcacacataaataacccgcc 35670483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 15 - 276
Target Start/End: Original strand, 40728854 - 40729113
Alignment:
Q  15 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaatacatttaag------tc 108  Q
    ||||||||||||| |||||||| | ||||||| || ||||||||||||||||||||||||||||||||||||  |||||||||||||| |||      ||    
T  40728854 aattggttcatactcaaagcaccaaaacaatgtcataaaatagatagtatcaaaacttctcaatcaaaaagatttaagaaaatacattcaagtcatattc 40728953  T
Q  109 tttaaggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttatcaacacaccgatgtataacagacccaatgcaatgcaatgatgtg 208  Q
    ||||| |||||||||||||| ||||| |||| || ||||  |||||||||| |||  ||  |||  || || ||| |||      ||||||||| ||| |    
T  40728954 tttaa-gtaaagttcacacatatttcatttgcat-tatactagtttaatcaattacaaaatcacaaatatacaaccgac-----tcaatgcaattatgcg 40729046  T
Q  209 caaaatgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaata 276  Q
     || ||||||||||||| | |||| |||||||||||||| || ||||||||| |||||||||||||||    
T  40729047 taagatgcatgctcttata-actatatgatccggatataacctgccacacagacaccacacagaaata 40729113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 15 - 164
Target Start/End: Original strand, 28266575 - 28266729
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaatacatttaag------t 107  Q
    ||||||||||||| |||||||| |||| ||||| || |||||||| | |||||| ||||||||||||||||||| |||||||||||||| |||      |    
T  28266575 aattggttcatactcaaagcaccagaaacaatgtcataaaatagacaatatcaacacttctcaatcaaaaagaattaagaaaatacattcaagtcatatt 28266674  T
Q  108 ctttaaggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttat 164  Q
    |||||| |||||||||||||||||||| |||| || ||||| | |||||||| ||||    
T  28266675 ctttaa-gtaaagttcacacacatttcatttgcat-tataatattttaatcaattat 28266729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 194 - 270
Target Start/End: Original strand, 36731835 - 36731911
Alignment:
Q  194 caatgcaatgatgtgcaaaatgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacaca 270  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||| |||||| |||| |||||||||| ||||||    
T  36731835 caatgcaatgctgtgtaaaatgcatgctcttaaatactacatgatccagatataacccgtcacacaggcagcacaca 36731911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 23827813 - 23827899
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaataca 100  Q
    ||||||||||||| ||||||||||||| ||||||   |||||||||||||| ||| |||||| ||||||||||||||| || |||||    
T  23827813 aattggttcatactcaaagcacaagaaacaatgctctaaaatagatagtataaaatcttctcgatcaaaaagaaataaaaatataca 23827899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 34397279 - 34397365
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaataca 100  Q
    ||||| ||||||| |||||||| |||| ||||| ||  ||||||||| ||||||||||| |||||||||||||| ||||||||||||    
T  34397279 aattgattcatactcaaagcaccagaaacaatgtcatgaaatagataatatcaaaacttatcaatcaaaaagaattaagaaaataca 34397365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 108
Target Start/End: Original strand, 18292167 - 18292262
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataag-aaaatacatttaagtc 108  Q
    ||||||||||| | |||||||| |||| ||||| ||  ||||||||| ||||||||||| |||||||||||||| |||| |||||||||| |||||    
T  18292167 aattggttcatcctcaaagcaccagaaacaatgtcatgaaatagataatatcaaaacttatcaatcaaaaagaattaagaaaaatacattcaagtc 18292262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 194 - 272
Target Start/End: Complemental strand, 44789107 - 44789030
Alignment:
Q  194 caatgcaatgatgtgcaaaatgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacaga 272  Q
    ||||||||| ||| | || |||||||||| || | |||| |||||||||||||| ||||||||||||||||||||||||    
T  44789107 caatgcaattatgcgtaagatgcatgctcgtata-actatatgatccggatataacccgccacacaggcaccacacaga 44789030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 108
Target Start/End: Complemental strand, 44789289 - 44789194
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataa-gaaaatacatttaagtc 108  Q
    ||||||||||||| ||||||||| ||| | ||| || |||||||||| ||||||||||| |||||||| ||||| |||  |||||||||| |||||    
T  44789289 aattggttcatactcaaagcacaggaaactatgtcataaaatagataatatcaaaacttatcaatcaacaagaattaataaaaatacattcaagtc 44789194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 29271365 - 29271283
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaa 96  Q
    |||||||||||||  |||||||||||| || || |  |||||||||| |||||||| |||||||||||| |  ||||||||||    
T  29271365 aattggttcatactaaaagcacaagaaacagtgtcgtaaaatagataatatcaaaaattctcaatcaaacatgaataagaaaa 29271283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 316 - 368
Target Start/End: Original strand, 28266883 - 28266934
Alignment:
Q  316 atgcatgatcatgaacaatgaagactaaatccagccacttaggcacaacaatg 368  Q
    |||||||||||| || |||||||||||||||| |||||  |||||||||||||    
T  28266883 atgcatgatcattaa-aatgaagactaaatcccgccacacaggcacaacaatg 28266934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 218; Significance: 1e-120; HSPs: 16)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 15 - 276
Target Start/End: Original strand, 7336116 - 7336380
Alignment:
Q  15 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaa-tacatttaagtctttaa 113  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  7336116 aattggttcatactcaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaaatacatttaagtctttaa 7336215  T
Q  114 ggtaaagttcacacacatttcttttgtatatataaaa--gtttaatcacttatcaacacaccgatgtataacagacccaatgcaatgcaatgatgtgcaa 211  Q
    ||||||||||| ||||||||| |||||||||||| ||  ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  7336216 ggtaaagttcatacacatttcctttgtatatatataacagtttaatcatttatcaacacacagatgtataacagacccaatgcaatgcaatgatgtgcaa 7336315  T
Q  212 aatgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaata 276  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  7336316 aatgcatgctcttagatactacatgatccggatatatcccgccacacaggcaccacacagaaata 7336380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 15 - 276
Target Start/End: Original strand, 46404024 - 46404287
Alignment:
Q  15 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaatacatttaagtctttaag 114  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46404024 aattggttcatactcaaagcacaagaacaatgccataaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaatacatttaagtctttaag 46404123  T
Q  115 gtaaagttcacacacatttcttttgtatatat--aaaagtttaatcacttatcaacacaccgatgtataacagacccaatgcaatgcaatgatgtgcaaa 212  Q
    |||||||||| ||||||||| |||||||||||  || |||||||||| ||||||||| || |||||||||||||||||||||||||||||||| ||||||    
T  46404124 gtaaagttcatacacatttcctttgtatatatacaacagtttaatcatttatcaacagacagatgtataacagacccaatgcaatgcaatgatatgcaaa 46404223  T
Q  213 atgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaata 276  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  46404224 acgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaata 46404287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 208; E-Value: 1e-114
Query Start/End: Original strand, 15 - 276
Target Start/End: Complemental strand, 16976100 - 16975840
Alignment:
Q  15 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaa-tacatttaagtctttaa 113  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  16976100 aattggttcatactcaaaacacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaaatacatttaagtctttaa 16976001  T
Q  114 ggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttatcaacacaccgatgtataacagacccaatgcaatgcaatgatgtgcaaaa 213  Q
    ||||||||||| |||||||| |||||||||||||| ||||||||||||||||||||||  ||||||||| ||||||||||||||||||||||||| ||||    
T  16976000 ggtaaagttcatacacatttattttgtatatataacagtttaatcacttatcaacaca--gatgtataatagacccaatgcaatgcaatgatgtgtaaaa 16975903  T
Q  214 tgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaata 276  Q
    |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||    
T  16975902 tgcatgctcttaaatagtacatgatccggatataacccgccacacaggcaccacacagaaata 16975840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 186; E-Value: 1e-100
Query Start/End: Original strand, 15 - 260
Target Start/End: Original strand, 5004153 - 5004401
Alignment:
Q  15 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaa-tacatttaagtctttaa 113  Q
    ||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  5004153 aattggttcatactcaaagcacaagaacaataccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaaatacatttaagtctttaa 5004252  T
Q  114 ggtaaagttcacacacatttcttttgtatata--taaaagtttaatcacttatcaacacaccgatgtataacagacccaatgcaatgcaatgatgtgcaa 211  Q
    ||||||||||| ||||||||| || |||||||  ||| |||||||||| |||||||||||| ||||||| | ||||||||||||||||||||||||||||    
T  5004253 ggtaaagttcatacacatttccttggtatatacataacagtttaatcatttatcaacacacagatgtattatagacccaatgcaatgcaatgatgtgcaa 5004352  T
Q  212 aatgcatgctcttaaatactacatgatccggatatatcccgccacacag 260  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  5004353 aatgcatgctcttaaatactacatgatccggatataacccgccacacag 5004401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 168; E-Value: 6e-90
Query Start/End: Original strand, 15 - 272
Target Start/End: Complemental strand, 9104880 - 9104627
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaa-tacatttaagtcttta 112  Q
    ||||||||||||| ||||||||||||| |||||||| |||||| |||||||| |||||||||||||||||||||||||||||| ||||||||||| ||||    
T  9104880 aattggttcatactcaaagcacaagaaacaatgccataaaataaatagtatcgaaacttctcaatcaaaaagaaataagaaaaatacatttaagt-ttta 9104782  T
Q  113 aggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttatcaacacaccgatgtataacagacccaatgcaatgcaatgatgtgcaaa 212  Q
    |||||||||||| |||||||||| |||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||     ||||||||| |||    
T  9104781 aggtaaagttcatacacatttctgttgtatatataacagtttaatcacttatcaacacacatatgtataacagacccaatgc-----aatgatgtgtaaa 9104687  T
Q  213 atgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacaga 272  Q
    ||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||    
T  9104686 atgcatgctcttaaatactacatgatccggatataacccaccacacaggcaccacacaga 9104627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 15 - 368
Target Start/End: Original strand, 11937312 - 11937653
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataag-aaaatacatttaagt----- 107  Q
    ||||||||||||  ||||||| ||||| ||||| || ||||   ||||||||||||||||||||| ||||||||||||| |||||||||| ||||         
T  11937312 aattggttcatattcaaagcataagaaacaatgtcataaaa---atagtatcaaaacttctcaattaaaaagaaataaggaaaatacattcaagttatat 11937408  T
Q  108 -ctttaaggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttatcaacacaccgatgtataacagacccaatgcaatgcaatgatg 206  Q
     ||||||  ||| ||||||||| ||||||||||  | ||||| |||||||||||||||||||||||  |||||||||||||||||||||||||||| |||    
T  11937409 gctttaaa-taaggttcacaca-atttcttttgctt-tataatagtttaatcacttatcaacacacaaatgtataacagacccaatgcaatgcaattatg 11937505  T
Q  207 tgcaaaatgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaataactcgccgccacacatgcaccacaaaaatg 306  Q
    || |||||||||| ||||| || |||||||||||||||||| ||||           |||||||||||||||   |||||||||| |||||||| |||||    
T  11937506 tgtaaaatgcatgttcttatattctacatgatccggatataacccg-----------ccacacagaaataac---ccgccacacaggcaccacacaaatg 11937591  T
Q  307 catatgctaatgcatgatcatgaacaatgaagactaaatccagccacttaggcacaacaatg 368  Q
    ||||||||||||||||||||| ||||||||| |||||||||| |||||||||||||||||||    
T  11937592 catatgctaatgcatgatcataaacaatgaaaactaaatccaaccacttaggcacaacaatg 11937653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 8731525 - 8731443
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaa 96  Q
    ||||||||||||| ||||||||||||| |||||||| ||||||||||||||||| |||| |||||||||||||||| ||||||    
T  8731525 aattggttcatactcaaagcacaagaaacaatgccataaaatagatagtatcaagacttatcaatcaaaaagaaattagaaaa 8731443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 9083412 - 9083330
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaa 96  Q
    ||||||||||||| ||||||||||||| |||||||| ||||||||||||||||| |||| |||||||||||||||| ||||||    
T  9083412 aattggttcatactcaaagcacaagaaacaatgccataaaatagatagtatcaagacttatcaatcaaaaagaaattagaaaa 9083330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 285 - 366
Target Start/End: Complemental strand, 9104646 - 9104566
Alignment:
Q  285 ccacacatgcaccacaaaaatgcatatgctaatgcatgatcatgaacaatgaagactaaatccagccacttaggcacaacaa 366  Q
    ||||||| |||||||| | ||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||    
T  9104646 ccacacaggcaccacacagatgcatatgctaatgcatgatcatgaa-aatgaagactaaatcacgccacttaggcacaacaa 9104566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 213 - 326
Target Start/End: Original strand, 17542329 - 17542437
Alignment:
Q  213 atgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaataactcgccgccacacatgcaccacaaaaatgcatatg 312  Q
    ||||||||||||| | |||  ||||||||||||||  |||||||||||||||||||||||||||||   |||||||||| |||||||| | || ||||||    
T  17542329 atgcatgctcttata-actgtatgatccggatataaaccgccacacaggcaccacacagaaataac---ccgccacacaggcaccacacagatacatatg 17542424  T
Q  313 ctaatgcatgatca 326  Q
    |  |||||||||||    
T  17542425 c-gatgcatgatca 17542437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 5704698 - 5704621
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataa 91  Q
    ||||||||||||| ||||||||||||| ||||||   |||||||||||||| ||| |||||| |||||||||||||||    
T  5704698 aattggttcatactcaaagcacaagaaacaatgctctaaaatagatagtataaaatcttctcgatcaaaaagaaataa 5704621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 96
Target Start/End: Original strand, 43277466 - 43277548
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaa 96  Q
    ||||||||||||| |||||||| | || ||||| || |||||||||||||||||||||| ||||| ||||| || ||||||||    
T  43277466 aattggttcatactcaaagcaccataaacaatgtcataaaatagatagtatcaaaacttatcaataaaaaaaaattaagaaaa 43277548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 15 - 108
Target Start/End: Original strand, 17542128 - 17542223
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataag-aaaatacatttaagtc 108  Q
    |||| |||||||| |||||||| | || ||||| || |||||||||| |||||||||||  ||||||||||||| |||| |||||||||| |||||    
T  17542128 aattagttcatactcaaagcaccataaacaatgtcataaaatagataatatcaaaacttaccaatcaaaaagaattaagaaaaatacattcaagtc 17542223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 21 - 91
Target Start/End: Complemental strand, 16972681 - 16972610
Alignment:
Q  21 ttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataa 91  Q
    ||||||| ||||||||||||| ||||||   |||||||||||||| ||| ||| || |||||||||||||||    
T  16972681 ttcatactcaaagcacaagaaacaatgctctaaaatagatagtataaaatcttttccatcaaaaagaaataa 16972610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 345
Target Start/End: Complemental strand, 8731247 - 8731212
Alignment:
Q  309 tatgctaatgcatgatcatgaacaatgaagactaaat 345  Q
    |||||||||||||||||||||| ||||||||||||||    
T  8731247 tatgctaatgcatgatcatgaa-aatgaagactaaat 8731212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 309 - 345
Target Start/End: Complemental strand, 9083134 - 9083099
Alignment:
Q  309 tatgctaatgcatgatcatgaacaatgaagactaaat 345  Q
    |||||||||||||||||||||| ||||||||||||||    
T  9083134 tatgctaatgcatgatcatgaa-aatgaagactaaat 9083099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 167; Significance: 2e-89; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 167; E-Value: 2e-89
Query Start/End: Original strand, 15 - 225
Target Start/End: Complemental strand, 214 - 1
Alignment:
Q  15 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaa-tacatttaagtctttaa 113  Q
    ||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  214 aattgattcatactcaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaaatacatttaagtctttaa 115  T
Q  114 ggtaaagttcacacacatttcttttgtatatataaaa--gtttaatcacttatcaacacaccgatgtataacagacccaatgcaatgcaatgatgtgcaa 211  Q
    ||||||||||| ||||||||| |||||||||||| ||  ||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  114 ggtaaagttcatacacatttcctttgtatatatataacagtttaatcatttatcaacacacagatgtataacagacccaatgcaatgcaatgatgtgcaa 15  T
Q  212 aatgcatgctctta 225  Q
    ||||||||||||||    
T  14 aatgcatgctctta 1  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 165; Significance: 4e-88; HSPs: 14)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 165; E-Value: 4e-88
Query Start/End: Original strand, 54 - 368
Target Start/End: Original strand, 40840984 - 40841300
Alignment:
Q  54 atagatagtatcaaaacttctcaatcaaaaagaaataagaaaat-acatttaagtc------tttaaggtaaagttcacacacatttcttttgtatatat 146  Q
    |||||||||| ||||||||||||| ||||||||| ||||||||| ||||| || ||      |||||| ||||||||||||||||||| ||||||| |||    
T  40840984 atagatagtaccaaaacttctcaaacaaaaagaattaagaaaattacattcaattcatattctttaagttaaagttcacacacatttcctttgtat-tat 40841082  T
Q  147 aaaagtttaatcacttatcaacacaccgatgtataacagacccaatgcaatgcaatgatgtgcaaaatgcatgctcttaaatactacatgatccggatat 246  Q
    || |||||||||||||||||||||||  ||| ||| ||||||||||||||||| || ||||| |||||| ||||||||||||||||||||||||||||||    
T  40841083 aatagtttaatcacttatcaacacacaaatgcatagcagacccaatgcaatgcgattatgtgtaaaatgtatgctcttaaatactacatgatccggatat 40841182  T
Q  247 atcccgccacacaggcaccacacagaaataactcgccgccacacatgcaccacaaaaatgcatatgctaatgcatgatcatgaacaatgaagactaaatc 346  Q
    | |||||||||||||||||||| ||||||||   ||||||||||| |||||||| | ||||||||||||||||||||||||||| |||||||||||||||    
T  40841183 aacccgccacacaggcaccacatagaaataa---gccgccacacaggcaccacacagatgcatatgctaatgcatgatcatgaa-aatgaagactaaatc 40841278  T
Q  347 cagccacttaggcacaacaatg 368  Q
    | || || ||||||||||||||    
T  40841279 ccgcaacataggcacaacaatg 40841300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 15 - 160
Target Start/End: Complemental strand, 35840932 - 35840786
Alignment:
Q  15 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataag-aaaatacatttaagtctttaa 113  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||    
T  35840932 aattggttcatactcaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaattaaaaagaaataggaaaaatacatttaagtctttaa 35840833  T
Q  114 ggtaaagttcacacacatttcttttgtatatataaaagtttaatcac 160  Q
    ||||||||||| ||||||||||||||||||||||| |||||||||||    
T  35840832 ggtaaagttcatacacatttcttttgtatatataacagtttaatcac 35840786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 15 - 108
Target Start/End: Original strand, 41957883 - 41957975
Alignment:
Q  15 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaatacatttaagtc 108  Q
    ||||||||||||| |||||||  | ||||||| || ||||||||||||||||||||||||||||||||||||  |||||||||||||| |||||    
T  41957883 aattggttcatactcaaagcaaga-aacaatgtcataaaatagatagtatcaaaacttctcaatcaaaaagatttaagaaaatacattcaagtc 41957975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 194 - 330
Target Start/End: Original strand, 22815930 - 22816061
Alignment:
Q  194 caatgcaatgatgtgcaaaatgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaataactcgccgccacacatg 293  Q
    ||||||||| ||||| || ||||||||||||| | |||| ||||||| |||||| ||||||||||| ||||||||||||||||||   |||| ||||| |    
T  22815930 caatgcaattatgtgtaagatgcatgctcttata-actatatgatccagatataacccgccacacaagcaccacacagaaataac---ccgctacacagg 22816025  T
Q  294 caccacaaaaatgcatatgctaatgcatgatcatgaa 330  Q
    |||| || | ||||||||||  |||||||||||||||    
T  22816026 caccgcacagatgcatatgc-catgcatgatcatgaa 22816061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 12659362 - 12659439
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataa 91  Q
    ||||||||||||| ||||||||||||| ||||||   |||||||||||||| ||| |||||| |||||||||||||||    
T  12659362 aattggttcatactcaaagcacaagaaacaatgctctaaaatagatagtataaaatcttctcgatcaaaaagaaataa 12659439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 330
Target Start/End: Complemental strand, 44436620 - 44436543
Alignment:
Q  249 cccgccacacaggcaccacacagaaataactcgccgccacacatgcaccacaaaaatgcatatgctaatgcatgatcatgaa 330  Q
    |||||||||||||||||||||||||||| |   |||||||||| |||||||| | |||||||||| || |||||||||||||    
T  44436620 cccgccacacaggcaccacacagaaatatc---ccgccacacaggcaccacacagatgcatatgccaa-gcatgatcatgaa 44436543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 15 - 96
Target Start/End: Complemental strand, 6150302 - 6150220
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaa 96  Q
    ||||||||||||| |||| ||| |||| ||||| || |||||||||| |||||||||||  ||||||||||||| ||||||||    
T  6150302 aattggttcatactcaaaacaccagaaacaatgtcataaaatagataatatcaaaacttaccaatcaaaaagaattaagaaaa 6150220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 194 - 300
Target Start/End: Complemental strand, 44436703 - 44436601
Alignment:
Q  194 caatgcaatgatgtgcaaaatgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaataactcgccgccacacatg 293  Q
    ||||||||| ||| | || ||||||||||||| | |||  |||||||||||||| |||||||||||| ||||||| | |||||||   |||||||||| |    
T  44436703 caatgcaattatgcgtaagatgcatgctcttata-actgtatgatccggatataacccgccacacagacaccacataaaaataac---ccgccacacagg 44436608  T
Q  294 caccaca 300  Q
    |||||||    
T  44436607 caccaca 44436601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 213 - 298
Target Start/End: Original strand, 22635627 - 22635708
Alignment:
Q  213 atgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaataactcgccgccacacatgcacca 298  Q
    |||||||||| |||| |||| |||||| ||||||| ||||||||||| |||||||| ||||||||    |||||||||||||||||    
T  22635627 atgcatgctcctaaa-actatatgatctggatataacccgccacacatgcaccacatagaaataa---tccgccacacatgcacca 22635708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 250 - 330
Target Start/End: Original strand, 22635692 - 22635768
Alignment:
Q  250 ccgccacacaggcaccacacagaaataactcgccgccacacatgcaccacaaaaatgcatatgctaatgcatgatcatgaa 330  Q
    |||||||||| |||||| ||||||||||||   ||||||||| |||||||| | ||||||||||  |||||||||||||||    
T  22635692 ccgccacacatgcaccatacagaaataact---cgccacacaggcaccacacagatgcatatgc-catgcatgatcatgaa 22635768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 213 - 270
Target Start/End: Original strand, 3189092 - 3189148
Alignment:
Q  213 atgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacaca 270  Q
    |||||||||| |||| |||| |||||||||||||| ||||||||||| ||||||||||    
T  3189092 atgcatgctcctaaa-actaaatgatccggatataacccgccacacaagcaccacaca 3189148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 15 - 108
Target Start/End: Complemental strand, 44436884 - 44436790
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaat-aagaaaatacatttaagtc 108  Q
    ||||| ||||||| |||||||| |||| ||||| || ||| |||||| ||||||||||| |||||||||||||| | || |||||||||| |||||    
T  44436884 aattgattcatactcaaagcaccagaaacaatgtcataaa-tagataatatcaaaacttatcaatcaaaaagaattaaaaaaaatacattcaagtc 44436790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 10251022 - 10250945
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataa 91  Q
    |||||||||||||  |||||||||||| ||||||   ||||||||||| || ||| |||||| || ||||||||||||    
T  10251022 aattggttcatactaaaagcacaagaaacaatgctctaaaatagatagcatgaaatcttctcgataaaaaagaaataa 10250945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 282 - 330
Target Start/End: Original strand, 3189128 - 3189175
Alignment:
Q  282 ccgccacacatgcaccacaaaaatgcatatgctaatgcatgatcatgaa 330  Q
    |||||||||| |||||||| ||||||||||| | |||||||||||||||    
T  3189128 ccgccacacaagcaccacacaaatgcatatg-tcatgcatgatcatgaa 3189175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 143; Significance: 5e-75; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 143; E-Value: 5e-75
Query Start/End: Original strand, 15 - 273
Target Start/End: Original strand, 32769 - 33016
Alignment:
Q  15 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaa--atacatttaagtcttta 112  Q
    ||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||| |||  |||||||||||| ||||    
T  32769 aattggttcatactcaaagcacaagaacaaagccacaaaatagatagtatcaaaacttctcaatcaaaaagagataaaaaaagatacatttaagt-ttta 32867  T
Q  113 aggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttatcaacacaccgatgtataacagacccaatgcaatgcaatgatgtgcaaa 212  Q
    |||||||||||| |||||| |||||| ||||||||| ||||||             |||| |||||||||||||| |||||||||||||||||||| |||    
T  32868 aggtaaagttcatacacatatcttttttatatataatagttta-------------acacagatgtataacagactcaatgcaatgcaatgatgtgtaaa 32954  T
Q  213 atgcatgctcttaaatactacatgatccggatatatcccgccacacaggca-ccacacagaa 273  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  32955 atgcatgctcttaaatactacatgatccggatataacccgccacacaggcatccacacagaa 33016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 43 - 74
Target Start/End: Complemental strand, 22524 - 22493
Alignment:
Q  43 aatgccacaaaatagatagtatcaaaacttct 74  Q
    ||||||||||||||||||||||||||||||||    
T  22524 aatgccacaaaatagatagtatcaaaacttct 22493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0657 (Bit Score: 89; Significance: 8e-43; HSPs: 1)
Name: scaffold0657
Description:

Target: scaffold0657; HSP #1
Raw Score: 89; E-Value: 8e-43
Query Start/End: Original strand, 15 - 110
Target Start/End: Original strand, 1762 - 1858
Alignment:
Q  15 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataag-aaaatacatttaagtctt 110  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  1762 aattggttcatacccaaagcacaagaacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaaatacatttaagtctt 1858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 15 - 330
Target Start/End: Original strand, 242470 - 242780
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaa-tacatttaag-----t 107  Q
    ||||||||||||| ||||||||||||| |||||  | ||| |||||  |||||||||||||||||||||||||| |||||||| |||||| ||      |    
T  242470 aattggttcatactcaaagcacaagaaacaatgttataaattagatgatatcaaaacttctcaatcaaaaagaattaagaaaaatacattcaatcatatt 242569  T
Q  108 ctttaaggtaaagttcacacacatttcttttgtatatataaaagtttaatcacttatcaacacaccgatgtataacagacccaatgcaatgcaatgatgt 207  Q
    ||||||| |||||||||||| |||||| |||| || || || | |||||||| |||| ||  |||  || || ||| |||     |||||||||| |||     
T  242570 ctttaag-taaagttcacacccatttcatttgcat-tagaatattttaatcaattataaaatcacaaatatacaactgac-----gcaatgcaattatgc 242662  T
Q  208 gcaaaatgcatgctcttaaatactacatgatccggatatatcccgccacacaggcaccacacagaaataactcgccgccacacatgcaccacaaaaatgc 307  Q
    | || ||||||||||||| | |||| |||||| ||||||| ||||||||||||||||||||||||||||||   |||||||||| |||||||| | ||||    
T  242663 gtaagatgcatgctcttata-actatatgatctggatataacccgccacacaggcaccacacagaaataac---ccgccacacaggcaccacacatatgc 242758  T
Q  308 atatgctaatgcatgatcatgaa 330  Q
    ||||||| ||||| |||||||||    
T  242759 atatgct-atgcaagatcatgaa 242780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 100
Target Start/End: Original strand, 356386 - 356472
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataagaaaataca 100  Q
    ||||||||||||| ||||||||||||| ||||||   |||||||||||||| ||| |||||| ||||||||||||||| || |||||    
T  356386 aattggttcatactcaaagcacaagaaacaatgctctaaaatagatagtataaaatcttctcgatcaaaaagaaataaaaatataca 356472  T

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Target: scaffold0120 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 15 - 91
Target Start/End: Original strand, 2146 - 2223
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataa 91  Q
    ||||||||||||| ||||||||||||| ||||||   |||||||||||||| ||| |||||| |||||||||||||||    
T  2146 aattggttcatactcaaagcacaagaaacaatgctctaaaatagatagtataaaatcttctcgatcaaaaagaaataa 2223  T

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Target: scaffold1838 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold1838
Description:

Target: scaffold1838; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 40 - 164
Target Start/End: Complemental strand, 944 - 816
Alignment:
Q  40 aacaatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataag-aaaatacatttaagtc----tttaaggtaaagttcacacacatttc 134  Q
    ||||||| || ||| |||| | ||||||||||| ||||||||||||||||||| |||||||||| |||||    ||| | ||||||||||||||||||||    
T  944 aacaatgtcataaagtagaaaatatcaaaacttatcaatcaaaaagaaataagaaaaatacattcaagtcatatttttaagtaaagttcacacacatttc 845  T
Q  135 ttttgtatatataaaagtttaatcacttat 164  Q
     |||| || ||||| | |||||||| ||||    
T  844 atttgcat-tataatattttaatcaattat 816  T

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Target: scaffold0069 (Bit Score: 38; Significance: 0.000000000002; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 91
Target Start/End: Complemental strand, 11480 - 11403
Alignment:
Q  15 aattggttcatacccaaagcacaagaa-caatgccacaaaatagatagtatcaaaacttctcaatcaaaaagaaataa 91  Q
    ||||||||||||| |||||||||| || ||||||   |||||||||||||| |||  |||||||||||||||||||||    
T  11480 aattggttcatactcaaagcacaaaaaacaatgctctaaaatagatagtataaaattttctcaatcaaaaagaaataa 11403  T

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