View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15714_low_14 (Length: 302)
Name: NF15714_low_14
Description: NF15714
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15714_low_14 |
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Alignment Details
Target: chr6 (Bit Score: 276; Significance: 1e-154; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 1 - 292
Target Start/End: Original strand, 16203065 - 16203356
Alignment:
| Q |
1 |
tccaagtgttgtgtttttgttgtactgttcatggcttccagctgaagggtgttgagttttcattgcactagagtgttgtggttgcatatattggccatga |
100 |
Q |
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| T |
16203065 |
tccaagtgttgtgtttttgttgtactgttcatggcttccagctgaagggttttgagttttcattgcactagagtgttgtggttgcatatattgaccatga |
16203164 |
T |
|
| Q |
101 |
cttgtagcagaatggtgttcagttggtaaccctgccctaaactgatcatggcttccagaagacgggtacggagtttgcattgcacctgaatgatgtggca |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |
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| T |
16203165 |
cttgtagcagaatggtgttcagttggtaaccctgccctaaactgatcatggcttccagaagatgggtacggagtttgcattgcacctgaatgatgtggca |
16203264 |
T |
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| Q |
201 |
agtttgtagcagattggtgttgaggattagcctcagttgcactagaatatggtgacaaatattggtcttcactagtgtttaaagggtgatga |
292 |
Q |
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||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
16203265 |
agtttgtagcagattggtgttgaggattagcctcagtagcactagaatatggtgacaaatattggtcttcactagtgtttaaagggtgatga |
16203356 |
T |
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