View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF15715_high_21 (Length: 272)
Name: NF15715_high_21
Description: NF15715
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF15715_high_21 |
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Alignment Details
Target: chr7 (Bit Score: 246; Significance: 1e-136; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 246; E-Value: 1e-136
Query Start/End: Original strand, 1 - 254
Target Start/End: Original strand, 37859273 - 37859526
Alignment:
| Q |
1 |
aaaatcagttattgatgtgagtggtggaggaaagttacaagaagctttattaactcttctagacacacaattattcatgttgttattgttaacatcattt |
100 |
Q |
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||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37859273 |
aaaatcagttattgaagtgagtggtggaggaaagttacaagaagctttattaactcttctagacacacaattattcatgttgttattgttaacatcattt |
37859372 |
T |
|
| Q |
101 |
cttgtgtcagaagaaaataatgaaacatcaatatcactactttcaccagcattgctaccagtttcactcccaaggctttcagtgcacatttctaagctct |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37859373 |
cttgtgtcagaagaaaataatgaaacatcaatatcactactttcaccagcattgctaccagtttcactcccaaggctttcagtgcacatttctaagctct |
37859472 |
T |
|
| Q |
201 |
tttcacttagcattgatgaggaacgtttcacagtaggatgaacatagactttac |
254 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
37859473 |
tttcacttagcattgatgaggaacgtttcacagtaggatgaacatagacgttac |
37859526 |
T |
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